# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 6.303511068224907*${_u_distance} variable latticeconst_converted equal 6.303511068224907*1 lattice diamond ${latticeconst_converted} lattice diamond 6.30351106822491 Lattice spacing in x,y,z = 6.3035111 6.3035111 6.3035111 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (63.035111 63.035111 63.035111) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms create_atoms CPU = 0.002 seconds variable mass_converted equal 118.71*${_u_mass} variable mass_converted equal 118.71*1 kim_interactions Sn #=== BEGIN kim_interactions ================================== pair_style kim MEAM_LAMMPS_VellaChenStillinger_2017_Sn__MO_316045643888_000 pair_coeff * * Sn #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 118.71 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 250465.295928465 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 250465.295928465/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 250465.295928465/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 250465.295928465/(1*1*${_u_distance}) variable V0_metal equal 250465.295928465/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 250465.295928465*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 250465.295928465 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 293.15*${_u_temperature} variable temp_converted equal 293.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 293.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "293.15 - 0.2" variable T_up equal "293.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.307 | 4.307 | 4.307 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -25453.359 -25453.359 -25756.462 -25756.462 293.15 293.15 250465.3 250465.3 1292.5922 1292.5922 1000 -25118.809 -25118.809 -25449.653 -25449.653 319.97964 319.97964 253253.1 253253.1 236.19426 236.19426 Loop time of 30.5654 on 1 procs for 1000 steps with 8000 atoms Performance: 2.827 ns/day, 8.490 hours/ns, 32.717 timesteps/s 81.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.083 | 30.083 | 30.083 | 0.0 | 98.42 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.051086 | 0.051086 | 0.051086 | 0.0 | 0.17 Output | 6e-05 | 6e-05 | 6e-05 | 0.0 | 0.00 Modify | 0.39505 | 0.39505 | 0.39505 | 0.0 | 1.29 Other | | 0.03578 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 272000.0 ave 272000 max 272000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 272000 Ave neighs/atom = 34.000000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -25118.809 -25118.809 -25449.653 -25449.653 319.97964 319.97964 253253.1 253253.1 236.19426 236.19426 2000 -25152.919 -25152.919 -25446.171 -25446.171 283.62198 283.62198 253285.86 253285.86 57.048051 57.048051 Loop time of 33.1077 on 1 procs for 1000 steps with 8000 atoms Performance: 2.610 ns/day, 9.197 hours/ns, 30.204 timesteps/s 80.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 32.595 | 32.595 | 32.595 | 0.0 | 98.45 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.051163 | 0.051163 | 0.051163 | 0.0 | 0.15 Output | 7.05e-05 | 7.05e-05 | 7.05e-05 | 0.0 | 0.00 Modify | 0.42639 | 0.42639 | 0.42639 | 0.0 | 1.29 Other | | 0.03547 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288766.0 ave 288766 max 288766 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288766 Ave neighs/atom = 36.095750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -25152.919 -25152.919 -25446.171 -25446.171 283.62198 283.62198 253285.86 253285.86 57.048051 57.048051 3000 -25138.644 -25138.644 -25442.38 -25442.38 293.76261 293.76261 253465.29 253465.29 -21.969847 -21.969847 Loop time of 31.4989 on 1 procs for 1000 steps with 8000 atoms Performance: 2.743 ns/day, 8.750 hours/ns, 31.747 timesteps/s 85.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 31.037 | 31.037 | 31.037 | 0.0 | 98.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.052292 | 0.052292 | 0.052292 | 0.0 | 0.17 Output | 4.99e-05 | 4.99e-05 | 4.99e-05 | 0.0 | 0.00 Modify | 0.37437 | 0.37437 | 0.37437 | 0.0 | 1.19 Other | | 0.03494 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288764.0 ave 288764 max 288764 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288764 Ave neighs/atom = 36.095500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -25138.644 -25138.644 -25442.38 -25442.38 293.76261 293.76261 253465.29 253465.29 -21.969847 -21.969847 4000 -25145.451 -25145.451 -25443.423 -25443.423 288.18776 288.18776 253365.65 253365.65 101.14036 101.14036 Loop time of 33.0051 on 1 procs for 1000 steps with 8000 atoms Performance: 2.618 ns/day, 9.168 hours/ns, 30.298 timesteps/s 81.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 32.53 | 32.53 | 32.53 | 0.0 | 98.56 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.072949 | 0.072949 | 0.072949 | 0.0 | 0.22 Output | 5.86e-05 | 5.86e-05 | 5.86e-05 | 0.0 | 0.00 Modify | 0.36732 | 0.36732 | 0.36732 | 0.0 | 1.11 Other | | 0.03514 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288244.0 ave 288244 max 288244 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288244 Ave neighs/atom = 36.030500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -25145.451 -25145.451 -25443.423 -25443.423 288.18776 288.18776 253365.65 253365.65 101.14036 101.14036 5000 -25143.306 -25143.306 -25441.763 -25441.763 288.65738 288.65738 253400.53 253400.53 19.233066 19.233066 Loop time of 31.3225 on 1 procs for 1000 steps with 8000 atoms Performance: 2.758 ns/day, 8.701 hours/ns, 31.926 timesteps/s 85.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.838 | 30.838 | 30.838 | 0.0 | 98.45 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.050943 | 0.050943 | 0.050943 | 0.0 | 0.16 Output | 4.69e-05 | 4.69e-05 | 4.69e-05 | 0.0 | 0.00 Modify | 0.39849 | 0.39849 | 0.39849 | 0.0 | 1.27 Other | | 0.03453 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288304.0 ave 288304 max 288304 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288304 Ave neighs/atom = 36.038000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 296.521592483535, Press = 109.225282280256 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -25143.306 -25143.306 -25441.763 -25441.763 288.65738 288.65738 253400.53 253400.53 19.233066 19.233066 6000 -25143.514 -25143.514 -25445.424 -25445.424 291.99564 291.99564 253339.76 253339.76 120.56782 120.56782 Loop time of 30.8275 on 1 procs for 1000 steps with 8000 atoms Performance: 2.803 ns/day, 8.563 hours/ns, 32.439 timesteps/s 86.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.378 | 30.378 | 30.378 | 0.0 | 98.54 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.050611 | 0.050611 | 0.050611 | 0.0 | 0.16 Output | 4.46e-05 | 4.46e-05 | 4.46e-05 | 0.0 | 0.00 Modify | 0.36436 | 0.36436 | 0.36436 | 0.0 | 1.18 Other | | 0.03464 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288436.0 ave 288436 max 288436 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288436 Ave neighs/atom = 36.054500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.164155504801, Press = 16.3915815819687 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -25143.514 -25143.514 -25445.424 -25445.424 291.99564 291.99564 253339.76 253339.76 120.56782 120.56782 7000 -25140.045 -25140.045 -25443.249 -25443.249 293.2475 293.2475 253500.96 253500.96 -119.22972 -119.22972 Loop time of 28.154 on 1 procs for 1000 steps with 8000 atoms Performance: 3.069 ns/day, 7.821 hours/ns, 35.519 timesteps/s 94.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.647 | 27.647 | 27.647 | 0.0 | 98.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.05036 | 0.05036 | 0.05036 | 0.0 | 0.18 Output | 4.57e-05 | 4.57e-05 | 4.57e-05 | 0.0 | 0.00 Modify | 0.39079 | 0.39079 | 0.39079 | 0.0 | 1.39 Other | | 0.06634 | | | 0.24 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288238.0 ave 288238 max 288238 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288238 Ave neighs/atom = 36.029750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.04728240078, Press = 14.2221731777772 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -25140.045 -25140.045 -25443.249 -25443.249 293.2475 293.2475 253500.96 253500.96 -119.22972 -119.22972 8000 -25144.561 -25144.561 -25447.733 -25447.733 293.21722 293.21722 253459.22 253459.22 -112.53065 -112.53065 Loop time of 27.863 on 1 procs for 1000 steps with 8000 atoms Performance: 3.101 ns/day, 7.740 hours/ns, 35.890 timesteps/s 94.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.46 | 27.46 | 27.46 | 0.0 | 98.55 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.049721 | 0.049721 | 0.049721 | 0.0 | 0.18 Output | 4.75e-05 | 4.75e-05 | 4.75e-05 | 0.0 | 0.00 Modify | 0.31901 | 0.31901 | 0.31901 | 0.0 | 1.14 Other | | 0.03423 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288252.0 ave 288252 max 288252 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288252 Ave neighs/atom = 36.031500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.168117878336, Press = 7.27340590687281 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -25144.561 -25144.561 -25447.733 -25447.733 293.21722 293.21722 253459.22 253459.22 -112.53065 -112.53065 9000 -25142.382 -25142.382 -25444.661 -25444.661 292.35302 292.35302 253352.04 253352.04 71.038645 71.038645 Loop time of 26.2832 on 1 procs for 1000 steps with 8000 atoms Performance: 3.287 ns/day, 7.301 hours/ns, 38.047 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.88 | 25.88 | 25.88 | 0.0 | 98.47 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.049845 | 0.049845 | 0.049845 | 0.0 | 0.19 Output | 4.75e-05 | 4.75e-05 | 4.75e-05 | 0.0 | 0.00 Modify | 0.31909 | 0.31909 | 0.31909 | 0.0 | 1.21 Other | | 0.03424 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288146.0 ave 288146 max 288146 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288146 Ave neighs/atom = 36.018250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.313093266695, Press = 3.56026226203406 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -25142.382 -25142.382 -25444.661 -25444.661 292.35302 292.35302 253352.04 253352.04 71.038645 71.038645 10000 -25138.821 -25138.821 -25447.7 -25447.7 298.73628 298.73628 253334.75 253334.75 147.3845 147.3845 Loop time of 26.5115 on 1 procs for 1000 steps with 8000 atoms Performance: 3.259 ns/day, 7.364 hours/ns, 37.719 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.106 | 26.106 | 26.106 | 0.0 | 98.47 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.049572 | 0.049572 | 0.049572 | 0.0 | 0.19 Output | 4.69e-05 | 4.69e-05 | 4.69e-05 | 0.0 | 0.00 Modify | 0.32226 | 0.32226 | 0.32226 | 0.0 | 1.22 Other | | 0.03387 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288498.0 ave 288498 max 288498 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288498 Ave neighs/atom = 36.062250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.205053882839, Press = 1.95337522041372 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -25138.821 -25138.821 -25447.7 -25447.7 298.73628 298.73628 253334.75 253334.75 147.3845 147.3845 11000 -25142.842 -25142.842 -25443.193 -25443.193 290.48843 290.48843 253227.33 253227.33 308.33919 308.33919 Loop time of 26.3742 on 1 procs for 1000 steps with 8000 atoms Performance: 3.276 ns/day, 7.326 hours/ns, 37.916 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.973 | 25.973 | 25.973 | 0.0 | 98.48 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.049226 | 0.049226 | 0.049226 | 0.0 | 0.19 Output | 4.59e-05 | 4.59e-05 | 4.59e-05 | 0.0 | 0.00 Modify | 0.31798 | 0.31798 | 0.31798 | 0.0 | 1.21 Other | | 0.0339 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 287944.0 ave 287944 max 287944 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 287944 Ave neighs/atom = 35.993000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.145820949184, Press = 2.052483323506 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -25142.842 -25142.842 -25443.193 -25443.193 290.48843 290.48843 253227.33 253227.33 308.33919 308.33919 12000 -25145.994 -25145.994 -25449.359 -25449.359 293.40383 293.40383 253197.66 253197.66 290.23694 290.23694 Loop time of 26.6783 on 1 procs for 1000 steps with 8000 atoms Performance: 3.239 ns/day, 7.411 hours/ns, 37.484 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.272 | 26.272 | 26.272 | 0.0 | 98.48 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.050211 | 0.050211 | 0.050211 | 0.0 | 0.19 Output | 5.19e-05 | 5.19e-05 | 5.19e-05 | 0.0 | 0.00 Modify | 0.32172 | 0.32172 | 0.32172 | 0.0 | 1.21 Other | | 0.03426 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288608.0 ave 288608 max 288608 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288608 Ave neighs/atom = 36.076000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.207231323933, Press = 2.22403748557437 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -25145.994 -25145.994 -25449.359 -25449.359 293.40383 293.40383 253197.66 253197.66 290.23694 290.23694 13000 -25142.953 -25142.953 -25441.128 -25441.128 288.38405 288.38405 253197.35 253197.35 418.58347 418.58347 Loop time of 26.3369 on 1 procs for 1000 steps with 8000 atoms Performance: 3.281 ns/day, 7.316 hours/ns, 37.970 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.935 | 25.935 | 25.935 | 0.0 | 98.47 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.049479 | 0.049479 | 0.049479 | 0.0 | 0.19 Output | 4.51e-05 | 4.51e-05 | 4.51e-05 | 0.0 | 0.00 Modify | 0.31871 | 0.31871 | 0.31871 | 0.0 | 1.21 Other | | 0.03374 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288534.0 ave 288534 max 288534 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288534 Ave neighs/atom = 36.066750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.28557261345, Press = 2.66229076789112 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -25142.953 -25142.953 -25441.128 -25441.128 288.38405 288.38405 253197.35 253197.35 418.58347 418.58347 14000 -25146.86 -25146.86 -25451.058 -25451.058 294.20915 294.20915 253257.66 253257.66 173.12983 173.12983 Loop time of 26.3904 on 1 procs for 1000 steps with 8000 atoms Performance: 3.274 ns/day, 7.331 hours/ns, 37.893 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.99 | 25.99 | 25.99 | 0.0 | 98.48 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.049081 | 0.049081 | 0.049081 | 0.0 | 0.19 Output | 4.57e-05 | 4.57e-05 | 4.57e-05 | 0.0 | 0.00 Modify | 0.31783 | 0.31783 | 0.31783 | 0.0 | 1.20 Other | | 0.03351 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288780.0 ave 288780 max 288780 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288780 Ave neighs/atom = 36.097500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.323812331765, Press = 2.3786133160171 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -25146.86 -25146.86 -25451.058 -25451.058 294.20915 294.20915 253257.66 253257.66 173.12983 173.12983 15000 -25145.842 -25145.842 -25439.787 -25439.787 284.29252 284.29252 253383.47 253383.47 49.089097 49.089097 Loop time of 26.6447 on 1 procs for 1000 steps with 8000 atoms Performance: 3.243 ns/day, 7.401 hours/ns, 37.531 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.236 | 26.236 | 26.236 | 0.0 | 98.47 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.050361 | 0.050361 | 0.050361 | 0.0 | 0.19 Output | 4.85e-05 | 4.85e-05 | 4.85e-05 | 0.0 | 0.00 Modify | 0.32369 | 0.32369 | 0.32369 | 0.0 | 1.21 Other | | 0.03454 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288342.0 ave 288342 max 288342 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288342 Ave neighs/atom = 36.042750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.318448403977, Press = 1.30034956302795 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -25145.842 -25145.842 -25439.787 -25439.787 284.29252 284.29252 253383.47 253383.47 49.089097 49.089097 16000 -25145.997 -25145.997 -25447.471 -25447.471 291.57498 291.57498 253502.95 253502.95 -153.44925 -153.44925 Loop time of 26.403 on 1 procs for 1000 steps with 8000 atoms Performance: 3.272 ns/day, 7.334 hours/ns, 37.875 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.001 | 26.001 | 26.001 | 0.0 | 98.48 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.049412 | 0.049412 | 0.049412 | 0.0 | 0.19 Output | 4.61e-05 | 4.61e-05 | 4.61e-05 | 0.0 | 0.00 Modify | 0.31856 | 0.31856 | 0.31856 | 0.0 | 1.21 Other | | 0.0338 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288830.0 ave 288830 max 288830 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288830 Ave neighs/atom = 36.103750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.219688577833, Press = 0.898669267703293 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -25145.997 -25145.997 -25447.471 -25447.471 291.57498 291.57498 253502.95 253502.95 -153.44925 -153.44925 17000 -25151.013 -25151.013 -25446.527 -25446.527 285.81015 285.81015 253479.81 253479.81 -149.57772 -149.57772 Loop time of 25.4758 on 1 procs for 1000 steps with 8000 atoms Performance: 3.391 ns/day, 7.077 hours/ns, 39.253 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.081 | 25.081 | 25.081 | 0.0 | 98.45 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.047897 | 0.047897 | 0.047897 | 0.0 | 0.19 Output | 3.78e-05 | 3.78e-05 | 3.78e-05 | 0.0 | 0.00 Modify | 0.31431 | 0.31431 | 0.31431 | 0.0 | 1.23 Other | | 0.03282 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 287654.0 ave 287654 max 287654 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 287654 Ave neighs/atom = 35.956750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.160761507906, Press = 0.92185436813115 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -25151.013 -25151.013 -25446.527 -25446.527 285.81015 285.81015 253479.81 253479.81 -149.57772 -149.57772 18000 -25144.527 -25144.527 -25444.765 -25444.765 290.37952 290.37952 253530.37 253530.37 -201.81417 -201.81417 Loop time of 25.546 on 1 procs for 1000 steps with 8000 atoms Performance: 3.382 ns/day, 7.096 hours/ns, 39.145 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.152 | 25.152 | 25.152 | 0.0 | 98.46 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.048122 | 0.048122 | 0.048122 | 0.0 | 0.19 Output | 4.92e-05 | 4.92e-05 | 4.92e-05 | 0.0 | 0.00 Modify | 0.31252 | 0.31252 | 0.31252 | 0.0 | 1.22 Other | | 0.03301 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 287864.0 ave 287864 max 287864 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 287864 Ave neighs/atom = 35.983000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.13534985677, Press = 0.827696264429674 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -25144.527 -25144.527 -25444.765 -25444.765 290.37952 290.37952 253530.37 253530.37 -201.81417 -201.81417 19000 -25144.707 -25144.707 -25442.007 -25442.007 287.53806 287.53806 253681.49 253681.49 -464.47817 -464.47817 Loop time of 25.4324 on 1 procs for 1000 steps with 8000 atoms Performance: 3.397 ns/day, 7.065 hours/ns, 39.320 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.042 | 25.042 | 25.042 | 0.0 | 98.47 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.047638 | 0.047638 | 0.047638 | 0.0 | 0.19 Output | 3.88e-05 | 3.88e-05 | 3.88e-05 | 0.0 | 0.00 Modify | 0.30968 | 0.30968 | 0.30968 | 0.0 | 1.22 Other | | 0.0327 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288186.0 ave 288186 max 288186 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288186 Ave neighs/atom = 36.023250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.154162235987, Press = 0.57518328158231 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -25144.707 -25144.707 -25442.007 -25442.007 287.53806 287.53806 253681.49 253681.49 -464.47817 -464.47817 20000 -25139.12 -25139.12 -25444.668 -25444.668 295.51529 295.51529 253701.69 253701.69 -475.77633 -475.77633 Loop time of 25.5033 on 1 procs for 1000 steps with 8000 atoms Performance: 3.388 ns/day, 7.084 hours/ns, 39.211 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.111 | 25.111 | 25.111 | 0.0 | 98.46 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.047578 | 0.047578 | 0.047578 | 0.0 | 0.19 Output | 3.75e-05 | 3.75e-05 | 3.75e-05 | 0.0 | 0.00 Modify | 0.31138 | 0.31138 | 0.31138 | 0.0 | 1.22 Other | | 0.03287 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 287988.0 ave 287988 max 287988 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 287988 Ave neighs/atom = 35.998500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.166051401836, Press = 0.205721946521553 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -25139.12 -25139.12 -25444.668 -25444.668 295.51529 295.51529 253701.69 253701.69 -475.77633 -475.77633 21000 -25151.72 -25151.72 -25447.626 -25447.626 286.18944 286.18944 253563.92 253563.92 -283.67538 -283.67538 Loop time of 24.5943 on 1 procs for 1000 steps with 8000 atoms Performance: 3.513 ns/day, 6.832 hours/ns, 40.660 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.212 | 24.212 | 24.212 | 0.0 | 98.44 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.046009 | 0.046009 | 0.046009 | 0.0 | 0.19 Output | 6.22e-05 | 6.22e-05 | 6.22e-05 | 0.0 | 0.00 Modify | 0.3047 | 0.3047 | 0.3047 | 0.0 | 1.24 Other | | 0.03189 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 287612.0 ave 287612 max 287612 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 287612 Ave neighs/atom = 35.951500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T293.15.out" else "print 'not_converged' file output/vol_T293.15.out" print '${V}' file output/vol_T293.15.out 253411.89238808 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0