# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 6.303511068224907*${_u_distance} variable latticeconst_converted equal 6.303511068224907*1 lattice diamond ${latticeconst_converted} lattice diamond 6.30351106822491 Lattice spacing in x,y,z = 6.3035111 6.3035111 6.3035111 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (63.035111 63.035111 63.035111) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms using lattice units in orthogonal box = (0.0000000 0.0000000 0.0000000) to (63.035111 63.035111 63.035111) create_atoms CPU = 0.005 seconds variable mass_converted equal 118.71*${_u_mass} variable mass_converted equal 118.71*1 kim_interactions Sn WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Sn #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_VellaChenStillinger_2017_Sn__MO_316045643888_001 pair_coeff * * Sn #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 118.71 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 250465.295928465 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 250465.295928465/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 250465.295928465/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 250465.295928465/(1*1*${_u_distance}) variable V0_metal equal 250465.295928465/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 250465.295928465*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 250465.295928465 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 333.15*${_u_temperature} variable temp_converted equal 333.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 333.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "333.15 - 0.2" variable T_up equal "333.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_316045643888_001#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.307 | 4.307 | 4.307 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -25412.001 -25412.001 -25756.462 -25756.462 333.15 333.15 250465.3 250465.3 1468.9651 1468.9651 1000 -25031.022 -25031.022 -25404.48 -25404.48 361.19534 361.19534 254025.81 254025.81 -360.44427 -360.44427 Loop time of 109.774 on 1 procs for 1000 steps with 8000 atoms Performance: 0.787 ns/day, 30.493 hours/ns, 9.110 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 108.06 | 108.06 | 108.06 | 0.0 | 98.44 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21621 | 0.21621 | 0.21621 | 0.0 | 0.20 Output | 0.00027594 | 0.00027594 | 0.00027594 | 0.0 | 0.00 Modify | 1.3332 | 1.3332 | 1.3332 | 0.0 | 1.21 Other | | 0.1638 | | | 0.15 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 272000.0 ave 272000 max 272000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 272000 Ave neighs/atom = 34.000000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -25031.022 -25031.022 -25404.48 -25404.48 361.19534 361.19534 254025.81 254025.81 -360.44427 -360.44427 2000 -25069.342 -25069.342 -25396.918 -25396.918 316.81867 316.81867 253837.73 253837.73 -109.27894 -109.27894 Loop time of 112.905 on 1 procs for 1000 steps with 8000 atoms Performance: 0.765 ns/day, 31.362 hours/ns, 8.857 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 111.2 | 111.2 | 111.2 | 0.0 | 98.49 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21355 | 0.21355 | 0.21355 | 0.0 | 0.19 Output | 0.00026763 | 0.00026763 | 0.00026763 | 0.0 | 0.00 Modify | 1.3274 | 1.3274 | 1.3274 | 0.0 | 1.18 Other | | 0.1637 | | | 0.14 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288708.0 ave 288708 max 288708 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288708 Ave neighs/atom = 36.088500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -25069.342 -25069.342 -25396.918 -25396.918 316.81867 316.81867 253837.73 253837.73 -109.27894 -109.27894 3000 -25052.344 -25052.344 -25399.978 -25399.978 336.21879 336.21879 253862.27 253862.27 8.9502103 8.9502103 Loop time of 115.439 on 1 procs for 1000 steps with 8000 atoms Performance: 0.748 ns/day, 32.066 hours/ns, 8.663 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 113.68 | 113.68 | 113.68 | 0.0 | 98.47 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21904 | 0.21904 | 0.21904 | 0.0 | 0.19 Output | 0.00025837 | 0.00025837 | 0.00025837 | 0.0 | 0.00 Modify | 1.3755 | 1.3755 | 1.3755 | 0.0 | 1.19 Other | | 0.1681 | | | 0.15 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 289092.0 ave 289092 max 289092 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 289092 Ave neighs/atom = 36.136500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -25052.344 -25052.344 -25399.978 -25399.978 336.21879 336.21879 253862.27 253862.27 8.9502103 8.9502103 4000 -25062.338 -25062.338 -25393.603 -25393.603 320.38754 320.38754 253632.41 253632.41 383.15077 383.15077 Loop time of 113.079 on 1 procs for 1000 steps with 8000 atoms Performance: 0.764 ns/day, 31.411 hours/ns, 8.843 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 111.36 | 111.36 | 111.36 | 0.0 | 98.48 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21541 | 0.21541 | 0.21541 | 0.0 | 0.19 Output | 0.00026466 | 0.00026466 | 0.00026466 | 0.0 | 0.00 Modify | 1.3368 | 1.3368 | 1.3368 | 0.0 | 1.18 Other | | 0.1637 | | | 0.14 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288874.0 ave 288874 max 288874 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288874 Ave neighs/atom = 36.109250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -25062.338 -25062.338 -25393.603 -25393.603 320.38754 320.38754 253632.41 253632.41 383.15077 383.15077 5000 -25056.876 -25056.876 -25406.598 -25406.598 338.23812 338.23812 253877.98 253877.98 -152.73612 -152.73612 Loop time of 115.001 on 1 procs for 1000 steps with 8000 atoms Performance: 0.751 ns/day, 31.945 hours/ns, 8.696 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 113.25 | 113.25 | 113.25 | 0.0 | 98.48 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21424 | 0.21424 | 0.21424 | 0.0 | 0.19 Output | 0.00023255 | 0.00023255 | 0.00023255 | 0.0 | 0.00 Modify | 1.365 | 1.365 | 1.365 | 0.0 | 1.19 Other | | 0.1662 | | | 0.14 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 289416.0 ave 289416 max 289416 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 289416 Ave neighs/atom = 36.177000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 336.722494200466, Press = -250.950990511987 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -25056.876 -25056.876 -25406.598 -25406.598 338.23812 338.23812 253877.98 253877.98 -152.73612 -152.73612 6000 -25058.464 -25058.464 -25401.965 -25401.965 332.22147 332.22147 254010.7 254010.7 -326.28362 -326.28362 Loop time of 113.03 on 1 procs for 1000 steps with 8000 atoms Performance: 0.764 ns/day, 31.397 hours/ns, 8.847 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 111.28 | 111.28 | 111.28 | 0.0 | 98.45 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21541 | 0.21541 | 0.21541 | 0.0 | 0.19 Output | 0.00022335 | 0.00022335 | 0.00022335 | 0.0 | 0.00 Modify | 1.3713 | 1.3713 | 1.3713 | 0.0 | 1.21 Other | | 0.1654 | | | 0.15 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288526.0 ave 288526 max 288526 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288526 Ave neighs/atom = 36.065750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.140488831846, Press = -7.08259993511425 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -25058.464 -25058.464 -25401.965 -25401.965 332.22147 332.22147 254010.7 254010.7 -326.28362 -326.28362 7000 -25055.867 -25055.867 -25395.353 -25395.353 328.33807 328.33807 253644 253644 334.20867 334.20867 Loop time of 112.749 on 1 procs for 1000 steps with 8000 atoms Performance: 0.766 ns/day, 31.319 hours/ns, 8.869 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 111.01 | 111.01 | 111.01 | 0.0 | 98.46 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21316 | 0.21316 | 0.21316 | 0.0 | 0.19 Output | 0.00022285 | 0.00022285 | 0.00022285 | 0.0 | 0.00 Modify | 1.3611 | 1.3611 | 1.3611 | 0.0 | 1.21 Other | | 0.1646 | | | 0.15 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288350.0 ave 288350 max 288350 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288350 Ave neighs/atom = 36.043750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.028655542115, Press = 3.74521456336362 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -25055.867 -25055.867 -25395.353 -25395.353 328.33807 328.33807 253644 253644 334.20867 334.20867 8000 -25060.309 -25060.309 -25408.807 -25408.807 337.05464 337.05464 253565.99 253565.99 396.78448 396.78448 Loop time of 113.107 on 1 procs for 1000 steps with 8000 atoms Performance: 0.764 ns/day, 31.419 hours/ns, 8.841 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 111.37 | 111.37 | 111.37 | 0.0 | 98.46 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21293 | 0.21293 | 0.21293 | 0.0 | 0.19 Output | 0.00028131 | 0.00028131 | 0.00028131 | 0.0 | 0.00 Modify | 1.3616 | 1.3616 | 1.3616 | 0.0 | 1.20 Other | | 0.1646 | | | 0.15 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 289712.0 ave 289712 max 289712 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 289712 Ave neighs/atom = 36.214000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.134588580925, Press = -5.94967617541986 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -25060.309 -25060.309 -25408.807 -25408.807 337.05464 337.05464 253565.99 253565.99 396.78448 396.78448 9000 -25053.772 -25053.772 -25401.851 -25401.851 336.64931 336.64931 253930.28 253930.28 -165.86839 -165.86839 Loop time of 112.029 on 1 procs for 1000 steps with 8000 atoms Performance: 0.771 ns/day, 31.119 hours/ns, 8.926 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 110.3 | 110.3 | 110.3 | 0.0 | 98.45 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21432 | 0.21432 | 0.21432 | 0.0 | 0.19 Output | 0.0002249 | 0.0002249 | 0.0002249 | 0.0 | 0.00 Modify | 1.353 | 1.353 | 1.353 | 0.0 | 1.21 Other | | 0.1638 | | | 0.15 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 289038.0 ave 289038 max 289038 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 289038 Ave neighs/atom = 36.129750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.325549643918, Press = -5.64882411791886 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -25053.772 -25053.772 -25401.851 -25401.851 336.64931 336.64931 253930.28 253930.28 -165.86839 -165.86839 10000 -25053.81 -25053.81 -25408.031 -25408.031 342.58928 342.58928 254012.58 254012.58 -333.64879 -333.64879 Loop time of 112.903 on 1 procs for 1000 steps with 8000 atoms Performance: 0.765 ns/day, 31.362 hours/ns, 8.857 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 111.15 | 111.15 | 111.15 | 0.0 | 98.45 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2151 | 0.2151 | 0.2151 | 0.0 | 0.19 Output | 0.0002296 | 0.0002296 | 0.0002296 | 0.0 | 0.00 Modify | 1.3681 | 1.3681 | 1.3681 | 0.0 | 1.21 Other | | 0.1648 | | | 0.15 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288490.0 ave 288490 max 288490 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288490 Ave neighs/atom = 36.061250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.150445788594, Press = -1.81068129351748 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -25053.81 -25053.81 -25408.031 -25408.031 342.58928 342.58928 254012.58 254012.58 -333.64879 -333.64879 11000 -25057.606 -25057.606 -25398.768 -25398.768 329.9585 329.9585 253804.28 253804.28 70.176072 70.176072 Loop time of 111.863 on 1 procs for 1000 steps with 8000 atoms Performance: 0.772 ns/day, 31.073 hours/ns, 8.939 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 110.14 | 110.14 | 110.14 | 0.0 | 98.46 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21459 | 0.21459 | 0.21459 | 0.0 | 0.19 Output | 0.00022516 | 0.00022516 | 0.00022516 | 0.0 | 0.00 Modify | 1.3489 | 1.3489 | 1.3489 | 0.0 | 1.21 Other | | 0.1633 | | | 0.15 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 287972.0 ave 287972 max 287972 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 287972 Ave neighs/atom = 35.996500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.155604219864, Press = -1.32173983409564 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -25057.606 -25057.606 -25398.768 -25398.768 329.9585 329.9585 253804.28 253804.28 70.176072 70.176072 12000 -25061.377 -25061.377 -25398.856 -25398.856 326.39777 326.39777 253804.29 253804.29 49.093662 49.093662 Loop time of 113.089 on 1 procs for 1000 steps with 8000 atoms Performance: 0.764 ns/day, 31.414 hours/ns, 8.843 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 111.34 | 111.34 | 111.34 | 0.0 | 98.45 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21433 | 0.21433 | 0.21433 | 0.0 | 0.19 Output | 0.00022647 | 0.00022647 | 0.00022647 | 0.0 | 0.00 Modify | 1.3709 | 1.3709 | 1.3709 | 0.0 | 1.21 Other | | 0.1649 | | | 0.15 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288894.0 ave 288894 max 288894 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288894 Ave neighs/atom = 36.111750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.273780605508, Press = -1.5008854121977 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -25061.377 -25061.377 -25398.856 -25398.856 326.39777 326.39777 253804.29 253804.29 49.093662 49.093662 13000 -25058.465 -25058.465 -25404.855 -25404.855 335.01635 335.01635 253825.8 253825.8 -11.904924 -11.904924 Loop time of 111.736 on 1 procs for 1000 steps with 8000 atoms Performance: 0.773 ns/day, 31.038 hours/ns, 8.950 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 110.01 | 110.01 | 110.01 | 0.0 | 98.46 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21328 | 0.21328 | 0.21328 | 0.0 | 0.19 Output | 0.00022525 | 0.00022525 | 0.00022525 | 0.0 | 0.00 Modify | 1.348 | 1.348 | 1.348 | 0.0 | 1.21 Other | | 0.1635 | | | 0.15 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 289146.0 ave 289146 max 289146 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 289146 Ave neighs/atom = 36.143250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.354338912433, Press = -0.613711371425355 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -25058.465 -25058.465 -25404.855 -25404.855 335.01635 335.01635 253825.8 253825.8 -11.904924 -11.904924 14000 -25059.571 -25059.571 -25403.07 -25403.07 332.21884 332.21884 253715.22 253715.22 224.99707 224.99707 Loop time of 111.88 on 1 procs for 1000 steps with 8000 atoms Performance: 0.772 ns/day, 31.078 hours/ns, 8.938 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 110.15 | 110.15 | 110.15 | 0.0 | 98.46 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21289 | 0.21289 | 0.21289 | 0.0 | 0.19 Output | 0.00023285 | 0.00023285 | 0.00023285 | 0.0 | 0.00 Modify | 1.3495 | 1.3495 | 1.3495 | 0.0 | 1.21 Other | | 0.1626 | | | 0.15 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288736.0 ave 288736 max 288736 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288736 Ave neighs/atom = 36.092000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.415350942017, Press = -1.43264133318373 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -25059.571 -25059.571 -25403.07 -25403.07 332.21884 332.21884 253715.22 253715.22 224.99707 224.99707 15000 -25056.463 -25056.463 -25408.708 -25408.708 340.67798 340.67798 253892.81 253892.81 -90.80382 -90.80382 Loop time of 113.074 on 1 procs for 1000 steps with 8000 atoms Performance: 0.764 ns/day, 31.410 hours/ns, 8.844 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 111.32 | 111.32 | 111.32 | 0.0 | 98.45 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21405 | 0.21405 | 0.21405 | 0.0 | 0.19 Output | 0.00053384 | 0.00053384 | 0.00053384 | 0.0 | 0.00 Modify | 1.3743 | 1.3743 | 1.3743 | 0.0 | 1.22 Other | | 0.1651 | | | 0.15 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288868.0 ave 288868 max 288868 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288868 Ave neighs/atom = 36.108500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.415013775481, Press = -1.92818177168546 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -25056.463 -25056.463 -25408.708 -25408.708 340.67798 340.67798 253892.81 253892.81 -90.80382 -90.80382 16000 -25060.79 -25060.79 -25405.281 -25405.281 333.17829 333.17829 253899.85 253899.85 -82.656152 -82.656152 Loop time of 113.401 on 1 procs for 1000 steps with 8000 atoms Performance: 0.762 ns/day, 31.500 hours/ns, 8.818 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 111.64 | 111.64 | 111.64 | 0.0 | 98.45 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21341 | 0.21341 | 0.21341 | 0.0 | 0.19 Output | 0.00021756 | 0.00021756 | 0.00021756 | 0.0 | 0.00 Modify | 1.3786 | 1.3786 | 1.3786 | 0.0 | 1.22 Other | | 0.1661 | | | 0.15 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288184.0 ave 288184 max 288184 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288184 Ave neighs/atom = 36.023000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.353032953303, Press = 0.0874196172968672 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -25060.79 -25060.79 -25405.281 -25405.281 333.17829 333.17829 253899.85 253899.85 -82.656152 -82.656152 17000 -25061.198 -25061.198 -25403.629 -25403.629 331.18636 331.18636 253471.95 253471.95 605.28981 605.28981 Loop time of 112.518 on 1 procs for 1000 steps with 8000 atoms Performance: 0.768 ns/day, 31.255 hours/ns, 8.887 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 110.79 | 110.79 | 110.79 | 0.0 | 98.46 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21304 | 0.21304 | 0.21304 | 0.0 | 0.19 Output | 0.00029925 | 0.00029925 | 0.00029925 | 0.0 | 0.00 Modify | 1.3528 | 1.3528 | 1.3528 | 0.0 | 1.20 Other | | 0.1638 | | | 0.15 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288544.0 ave 288544 max 288544 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288544 Ave neighs/atom = 36.068000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.319991383591, Press = -0.903637081231716 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -25061.198 -25061.198 -25403.629 -25403.629 331.18636 331.18636 253471.95 253471.95 605.28981 605.28981 18000 -25061.061 -25061.061 -25404.247 -25404.247 331.91681 331.91681 253922.04 253922.04 -173.94509 -173.94509 Loop time of 113.8 on 1 procs for 1000 steps with 8000 atoms Performance: 0.759 ns/day, 31.611 hours/ns, 8.787 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 112.04 | 112.04 | 112.04 | 0.0 | 98.45 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.216 | 0.216 | 0.216 | 0.0 | 0.19 Output | 0.00023006 | 0.00023006 | 0.00023006 | 0.0 | 0.00 Modify | 1.3773 | 1.3773 | 1.3773 | 0.0 | 1.21 Other | | 0.1647 | | | 0.14 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 289190.0 ave 289190 max 289190 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 289190 Ave neighs/atom = 36.148750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.31283528306, Press = -2.16763242191613 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -25061.061 -25061.061 -25404.247 -25404.247 331.91681 331.91681 253922.04 253922.04 -173.94509 -173.94509 19000 -25055.785 -25055.785 -25407.367 -25407.367 340.03729 340.03729 254075.69 254075.69 -404.55518 -404.55518 Loop time of 112.214 on 1 procs for 1000 steps with 8000 atoms Performance: 0.770 ns/day, 31.170 hours/ns, 8.912 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 110.47 | 110.47 | 110.47 | 0.0 | 98.45 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21458 | 0.21458 | 0.21458 | 0.0 | 0.19 Output | 0.00022935 | 0.00022935 | 0.00022935 | 0.0 | 0.00 Modify | 1.3602 | 1.3602 | 1.3602 | 0.0 | 1.21 Other | | 0.1641 | | | 0.15 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288464.0 ave 288464 max 288464 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288464 Ave neighs/atom = 36.058000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.274549833583, Press = -0.508406374518369 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -25055.785 -25055.785 -25407.367 -25407.367 340.03729 340.03729 254075.69 254075.69 -404.55518 -404.55518 20000 -25056.518 -25056.518 -25399.085 -25399.085 331.31881 331.31881 253718.85 253718.85 205.06883 205.06883 Loop time of 112.345 on 1 procs for 1000 steps with 8000 atoms Performance: 0.769 ns/day, 31.207 hours/ns, 8.901 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 110.61 | 110.61 | 110.61 | 0.0 | 98.45 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21517 | 0.21517 | 0.21517 | 0.0 | 0.19 Output | 0.00022083 | 0.00022083 | 0.00022083 | 0.0 | 0.00 Modify | 1.3576 | 1.3576 | 1.3576 | 0.0 | 1.21 Other | | 0.1641 | | | 0.15 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288060.0 ave 288060 max 288060 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288060 Ave neighs/atom = 36.007500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T333.15.out" else "print 'not_converged' file output/vol_T333.15.out" print '${V}' file output/vol_T333.15.out 253831.201234042 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0