# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 6.581419467926026*${_u_distance} variable latticeconst_converted equal 6.581419467926026*1 lattice diamond ${latticeconst_converted} lattice diamond 6.58141946792603 Lattice spacing in x,y,z = 6.5814195 6.5814195 6.5814195 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (65.814195 65.814195 65.814195) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms create_atoms CPU = 0.001 seconds variable mass_converted equal 118.71*${_u_mass} variable mass_converted equal 118.71*1 kim_interactions Sn #=== BEGIN kim_interactions ================================== pair_style kim MEAM_LAMMPS_KimKoLee_2020_NaSn__MO_329881861557_000 pair_coeff * * Sn #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 118.71 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 285074.72533011 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 285074.72533011/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 285074.72533011/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 285074.72533011/(1*1*${_u_distance}) variable V0_metal equal 285074.72533011/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 285074.72533011*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 285074.72533011 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 333.15*${_u_temperature} variable temp_converted equal 333.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 333.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "333.15 - 0.2" variable T_up equal "333.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.314 | 4.314 | 4.314 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -24733.044 -24733.044 -25077.505 -25077.505 333.15 333.15 285074.73 285074.73 1290.6205 1290.6205 1000 -24360.066 -24360.066 -24723.481 -24723.481 351.48201 351.48201 288233.97 288233.97 -641.81673 -641.81673 Loop time of 36.5743 on 1 procs for 1000 steps with 8000 atoms Performance: 2.362 ns/day, 10.160 hours/ns, 27.342 timesteps/s 72.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 36.077 | 36.077 | 36.077 | 0.0 | 98.64 Neigh | 0.01178 | 0.01178 | 0.01178 | 0.0 | 0.03 Comm | 0.053066 | 0.053066 | 0.053066 | 0.0 | 0.15 Output | 6.41e-05 | 6.41e-05 | 6.41e-05 | 0.0 | 0.00 Modify | 0.34761 | 0.34761 | 0.34761 | 0.0 | 0.95 Other | | 0.08471 | | | 0.23 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6554.00 ave 6554 max 6554 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265714.0 ave 265714 max 265714 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265714 Ave neighs/atom = 33.214250 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.316 | 4.316 | 4.316 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -24360.066 -24360.066 -24723.481 -24723.481 351.48201 351.48201 288233.97 288233.97 -641.81673 -641.81673 2000 -24373.987 -24373.987 -24706.36 -24706.36 321.4598 321.4598 288003.99 288003.99 156.78628 156.78628 Loop time of 34.7525 on 1 procs for 1000 steps with 8000 atoms Performance: 2.486 ns/day, 9.653 hours/ns, 28.775 timesteps/s 77.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 34.2 | 34.2 | 34.2 | 0.0 | 98.41 Neigh | 0.036556 | 0.036556 | 0.036556 | 0.0 | 0.11 Comm | 0.052094 | 0.052094 | 0.052094 | 0.0 | 0.15 Output | 6.36e-05 | 6.36e-05 | 6.36e-05 | 0.0 | 0.00 Modify | 0.42975 | 0.42975 | 0.42975 | 0.0 | 1.24 Other | | 0.03369 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6542.00 ave 6542 max 6542 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265174.0 ave 265174 max 265174 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265174 Ave neighs/atom = 33.146750 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.316 | 4.316 | 4.316 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -24373.987 -24373.987 -24706.36 -24706.36 321.4598 321.4598 288003.99 288003.99 156.78628 156.78628 3000 -24364.718 -24364.718 -24716.125 -24716.125 339.86841 339.86841 288115.45 288115.45 -280.20439 -280.20439 Loop time of 33.9271 on 1 procs for 1000 steps with 8000 atoms Performance: 2.547 ns/day, 9.424 hours/ns, 29.475 timesteps/s 79.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.448 | 33.448 | 33.448 | 0.0 | 98.59 Neigh | 0.034953 | 0.034953 | 0.034953 | 0.0 | 0.10 Comm | 0.052025 | 0.052025 | 0.052025 | 0.0 | 0.15 Output | 6.04e-05 | 6.04e-05 | 6.04e-05 | 0.0 | 0.00 Modify | 0.35756 | 0.35756 | 0.35756 | 0.0 | 1.05 Other | | 0.03408 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6578.00 ave 6578 max 6578 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265392.0 ave 265392 max 265392 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265392 Ave neighs/atom = 33.174000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.316 | 4.316 | 4.316 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -24364.718 -24364.718 -24716.125 -24716.125 339.86841 339.86841 288115.45 288115.45 -280.20439 -280.20439 4000 -24353.056 -24353.056 -24718.432 -24718.432 353.37771 353.37771 288455.87 288455.87 -110.97944 -110.97944 Loop time of 35.9428 on 1 procs for 1000 steps with 8000 atoms Performance: 2.404 ns/day, 9.984 hours/ns, 27.822 timesteps/s 74.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.422 | 35.422 | 35.422 | 0.0 | 98.55 Neigh | 0.036756 | 0.036756 | 0.036756 | 0.0 | 0.10 Comm | 0.072924 | 0.072924 | 0.072924 | 0.0 | 0.20 Output | 4.92e-05 | 4.92e-05 | 4.92e-05 | 0.0 | 0.00 Modify | 0.35737 | 0.35737 | 0.35737 | 0.0 | 0.99 Other | | 0.05388 | | | 0.15 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6535.00 ave 6535 max 6535 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265106.0 ave 265106 max 265106 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265106 Ave neighs/atom = 33.138250 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.316 | 4.316 | 4.316 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -24353.056 -24353.056 -24718.432 -24718.432 353.37771 353.37771 288455.87 288455.87 -110.97944 -110.97944 5000 -24384.485 -24384.485 -24718.684 -24718.684 323.22429 323.22429 288008.72 288008.72 59.039449 59.039449 Loop time of 35.7429 on 1 procs for 1000 steps with 8000 atoms Performance: 2.417 ns/day, 9.929 hours/ns, 27.978 timesteps/s 75.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.227 | 35.227 | 35.227 | 0.0 | 98.56 Neigh | 0.036213 | 0.036213 | 0.036213 | 0.0 | 0.10 Comm | 0.072337 | 0.072337 | 0.072337 | 0.0 | 0.20 Output | 5.2e-05 | 5.2e-05 | 5.2e-05 | 0.0 | 0.00 Modify | 0.37312 | 0.37312 | 0.37312 | 0.0 | 1.04 Other | | 0.03378 | | | 0.09 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6561.00 ave 6561 max 6561 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265148.0 ave 265148 max 265148 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265148 Ave neighs/atom = 33.143500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 328.550280318058, Press = 113.57356896303 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.316 | 4.316 | 4.316 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -24384.485 -24384.485 -24718.684 -24718.684 323.22429 323.22429 288008.72 288008.72 59.039449 59.039449 6000 -24374.742 -24374.742 -24712.223 -24712.223 326.39917 326.39917 287795.23 287795.23 205.26502 205.26502 Loop time of 38.4302 on 1 procs for 1000 steps with 8000 atoms Performance: 2.248 ns/day, 10.675 hours/ns, 26.021 timesteps/s 70.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.824 | 37.824 | 37.824 | 0.0 | 98.42 Neigh | 0.035496 | 0.035496 | 0.035496 | 0.0 | 0.09 Comm | 0.052675 | 0.052675 | 0.052675 | 0.0 | 0.14 Output | 5.16e-05 | 5.16e-05 | 5.16e-05 | 0.0 | 0.00 Modify | 0.46377 | 0.46377 | 0.46377 | 0.0 | 1.21 Other | | 0.05401 | | | 0.14 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6570.00 ave 6570 max 6570 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265858.0 ave 265858 max 265858 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265858 Ave neighs/atom = 33.232250 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 331.754061688402, Press = 11.012272432855 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.316 | 4.316 | 4.316 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -24374.742 -24374.742 -24712.223 -24712.223 326.39917 326.39917 287795.23 287795.23 205.26502 205.26502 7000 -24379.667 -24379.667 -24719.908 -24719.908 329.06782 329.06782 288008.95 288008.95 87.711451 87.711451 Loop time of 37.6113 on 1 procs for 1000 steps with 8000 atoms Performance: 2.297 ns/day, 10.448 hours/ns, 26.588 timesteps/s 71.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.004 | 37.004 | 37.004 | 0.0 | 98.39 Neigh | 0.036593 | 0.036593 | 0.036593 | 0.0 | 0.10 Comm | 0.053067 | 0.053067 | 0.053067 | 0.0 | 0.14 Output | 3.73e-05 | 3.73e-05 | 3.73e-05 | 0.0 | 0.00 Modify | 0.45718 | 0.45718 | 0.45718 | 0.0 | 1.22 Other | | 0.06008 | | | 0.16 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6535.00 ave 6535 max 6535 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265254.0 ave 265254 max 265254 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265254 Ave neighs/atom = 33.156750 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.880755873298, Press = -4.08968659760336 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.316 | 4.316 | 4.316 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -24379.667 -24379.667 -24719.908 -24719.908 329.06782 329.06782 288008.95 288008.95 87.711451 87.711451 8000 -24375.88 -24375.88 -24725.045 -24725.045 337.70028 337.70028 288408.79 288408.79 -390.10221 -390.10221 Loop time of 33.8238 on 1 procs for 1000 steps with 8000 atoms Performance: 2.554 ns/day, 9.396 hours/ns, 29.565 timesteps/s 79.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.255 | 33.255 | 33.255 | 0.0 | 98.32 Neigh | 0.057639 | 0.057639 | 0.057639 | 0.0 | 0.17 Comm | 0.072406 | 0.072406 | 0.072406 | 0.0 | 0.21 Output | 4.75e-05 | 4.75e-05 | 4.75e-05 | 0.0 | 0.00 Modify | 0.4049 | 0.4049 | 0.4049 | 0.0 | 1.20 Other | | 0.03403 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6602.00 ave 6602 max 6602 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265664.0 ave 265664 max 265664 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265664 Ave neighs/atom = 33.208000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.033435169117, Press = -0.37079520572723 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.316 | 4.316 | 4.316 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -24375.88 -24375.88 -24725.045 -24725.045 337.70028 337.70028 288408.79 288408.79 -390.10221 -390.10221 9000 -24375.108 -24375.108 -24715.421 -24715.421 329.138 329.138 288276.42 288276.42 -326.12956 -326.12956 Loop time of 35.564 on 1 procs for 1000 steps with 8000 atoms Performance: 2.429 ns/day, 9.879 hours/ns, 28.118 timesteps/s 75.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 34.882 | 34.882 | 34.882 | 0.0 | 98.08 Neigh | 0.038139 | 0.038139 | 0.038139 | 0.0 | 0.11 Comm | 0.074296 | 0.074296 | 0.074296 | 0.0 | 0.21 Output | 4.39e-05 | 4.39e-05 | 4.39e-05 | 0.0 | 0.00 Modify | 0.53538 | 0.53538 | 0.53538 | 0.0 | 1.51 Other | | 0.03423 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6537.00 ave 6537 max 6537 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265212.0 ave 265212 max 265212 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265212 Ave neighs/atom = 33.151500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.857723656643, Press = 2.84262070693793 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.316 | 4.316 | 4.316 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -24375.108 -24375.108 -24715.421 -24715.421 329.138 329.138 288276.42 288276.42 -326.12956 -326.12956 10000 -24375.635 -24375.635 -24716.985 -24716.985 330.14108 330.14108 288116.45 288116.45 -48.596156 -48.596156 Loop time of 33.3269 on 1 procs for 1000 steps with 8000 atoms Performance: 2.592 ns/day, 9.257 hours/ns, 30.006 timesteps/s 80.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 32.807 | 32.807 | 32.807 | 0.0 | 98.44 Neigh | 0.058629 | 0.058629 | 0.058629 | 0.0 | 0.18 Comm | 0.057609 | 0.057609 | 0.057609 | 0.0 | 0.17 Output | 4.59e-05 | 4.59e-05 | 4.59e-05 | 0.0 | 0.00 Modify | 0.34931 | 0.34931 | 0.34931 | 0.0 | 1.05 Other | | 0.05416 | | | 0.16 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6551.00 ave 6551 max 6551 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265198.0 ave 265198 max 265198 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265198 Ave neighs/atom = 33.149750 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.144864284805, Press = 3.21575360063851 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.316 | 4.316 | 4.316 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -24375.635 -24375.635 -24716.985 -24716.985 330.14108 330.14108 288116.45 288116.45 -48.596156 -48.596156 11000 -24374.865 -24374.865 -24723.78 -24723.78 337.45794 337.45794 287834.38 287834.38 295.4903 295.4903 Loop time of 29.0827 on 1 procs for 1000 steps with 8000 atoms Performance: 2.971 ns/day, 8.079 hours/ns, 34.385 timesteps/s 91.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.563 | 28.563 | 28.563 | 0.0 | 98.21 Neigh | 0.031375 | 0.031375 | 0.031375 | 0.0 | 0.11 Comm | 0.073732 | 0.073732 | 0.073732 | 0.0 | 0.25 Output | 4.39e-05 | 4.39e-05 | 4.39e-05 | 0.0 | 0.00 Modify | 0.38044 | 0.38044 | 0.38044 | 0.0 | 1.31 Other | | 0.03372 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6546.00 ave 6546 max 6546 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265316.0 ave 265316 max 265316 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265316 Ave neighs/atom = 33.164500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.108286285206, Press = 2.06861060266598 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.316 | 4.316 | 4.316 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -24374.865 -24374.865 -24723.78 -24723.78 337.45794 337.45794 287834.38 287834.38 295.4903 295.4903 12000 -24369.959 -24369.959 -24720.208 -24720.208 338.7473 338.7473 288169.35 288169.35 42.030838 42.030838 Loop time of 30.5031 on 1 procs for 1000 steps with 8000 atoms Performance: 2.832 ns/day, 8.473 hours/ns, 32.784 timesteps/s 88.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.022 | 30.022 | 30.022 | 0.0 | 98.42 Neigh | 0.041473 | 0.041473 | 0.041473 | 0.0 | 0.14 Comm | 0.055181 | 0.055181 | 0.055181 | 0.0 | 0.18 Output | 4.62e-05 | 4.62e-05 | 4.62e-05 | 0.0 | 0.00 Modify | 0.35076 | 0.35076 | 0.35076 | 0.0 | 1.15 Other | | 0.03392 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6513.00 ave 6513 max 6513 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265528.0 ave 265528 max 265528 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265528 Ave neighs/atom = 33.191000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.940746106288, Press = 0.123410870999955 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.316 | 4.316 | 4.316 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -24369.959 -24369.959 -24720.208 -24720.208 338.7473 338.7473 288169.35 288169.35 42.030838 42.030838 13000 -24376.814 -24376.814 -24722.107 -24722.107 333.95503 333.95503 288195.85 288195.85 -148.15663 -148.15663 Loop time of 27.7 on 1 procs for 1000 steps with 8000 atoms Performance: 3.119 ns/day, 7.694 hours/ns, 36.101 timesteps/s 96.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.236 | 27.236 | 27.236 | 0.0 | 98.32 Neigh | 0.032739 | 0.032739 | 0.032739 | 0.0 | 0.12 Comm | 0.052513 | 0.052513 | 0.052513 | 0.0 | 0.19 Output | 4.18e-05 | 4.18e-05 | 4.18e-05 | 0.0 | 0.00 Modify | 0.34486 | 0.34486 | 0.34486 | 0.0 | 1.24 Other | | 0.03397 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6583.00 ave 6583 max 6583 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265630.0 ave 265630 max 265630 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265630 Ave neighs/atom = 33.203750 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.908360069434, Press = 0.33142189346269 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.316 | 4.316 | 4.316 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -24376.814 -24376.814 -24722.107 -24722.107 333.95503 333.95503 288195.85 288195.85 -148.15663 -148.15663 14000 -24368.598 -24368.598 -24715.112 -24715.112 335.13549 335.13549 288158.24 288158.24 -46.878732 -46.878732 Loop time of 28.1294 on 1 procs for 1000 steps with 8000 atoms Performance: 3.072 ns/day, 7.814 hours/ns, 35.550 timesteps/s 95.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.637 | 27.637 | 27.637 | 0.0 | 98.25 Neigh | 0.049498 | 0.049498 | 0.049498 | 0.0 | 0.18 Comm | 0.06087 | 0.06087 | 0.06087 | 0.0 | 0.22 Output | 4.65e-05 | 4.65e-05 | 4.65e-05 | 0.0 | 0.00 Modify | 0.34884 | 0.34884 | 0.34884 | 0.0 | 1.24 Other | | 0.03357 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6534.00 ave 6534 max 6534 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265240.0 ave 265240 max 265240 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265240 Ave neighs/atom = 33.155000 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.869736597475, Press = 1.32390882343093 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.316 | 4.316 | 4.316 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -24368.598 -24368.598 -24715.112 -24715.112 335.13549 335.13549 288158.24 288158.24 -46.878732 -46.878732 15000 -24381.192 -24381.192 -24722.994 -24722.994 330.57901 330.57901 287956.78 287956.78 86.897053 86.897053 Loop time of 28.267 on 1 procs for 1000 steps with 8000 atoms Performance: 3.057 ns/day, 7.852 hours/ns, 35.377 timesteps/s 94.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.806 | 27.806 | 27.806 | 0.0 | 98.37 Neigh | 0.037803 | 0.037803 | 0.037803 | 0.0 | 0.13 Comm | 0.051905 | 0.051905 | 0.051905 | 0.0 | 0.18 Output | 3.66e-05 | 3.66e-05 | 3.66e-05 | 0.0 | 0.00 Modify | 0.33705 | 0.33705 | 0.33705 | 0.0 | 1.19 Other | | 0.03368 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6564.00 ave 6564 max 6564 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265252.0 ave 265252 max 265252 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265252 Ave neighs/atom = 33.156500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.949558275907, Press = 1.85403220760778 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.316 | 4.316 | 4.316 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -24381.192 -24381.192 -24722.994 -24722.994 330.57901 330.57901 287956.78 287956.78 86.897053 86.897053 16000 -24373.198 -24373.198 -24714.625 -24714.625 330.21508 330.21508 287681.99 287681.99 470.39172 470.39172 Loop time of 27.2758 on 1 procs for 1000 steps with 8000 atoms Performance: 3.168 ns/day, 7.577 hours/ns, 36.663 timesteps/s 97.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.811 | 26.811 | 26.811 | 0.0 | 98.30 Neigh | 0.036434 | 0.036434 | 0.036434 | 0.0 | 0.13 Comm | 0.052163 | 0.052163 | 0.052163 | 0.0 | 0.19 Output | 4.68e-05 | 4.68e-05 | 4.68e-05 | 0.0 | 0.00 Modify | 0.34273 | 0.34273 | 0.34273 | 0.0 | 1.26 Other | | 0.03356 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6519.00 ave 6519 max 6519 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265426.0 ave 265426 max 265426 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265426 Ave neighs/atom = 33.178250 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.86064992409, Press = 1.37059992223815 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.316 | 4.316 | 4.316 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -24373.198 -24373.198 -24714.625 -24714.625 330.21508 330.21508 287681.99 287681.99 470.39172 470.39172 17000 -24368.705 -24368.705 -24714.587 -24714.587 334.52424 334.52424 287873.54 287873.54 246.79818 246.79818 Loop time of 27.3035 on 1 procs for 1000 steps with 8000 atoms Performance: 3.164 ns/day, 7.584 hours/ns, 36.625 timesteps/s 98.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.856 | 26.856 | 26.856 | 0.0 | 98.36 Neigh | 0.037759 | 0.037759 | 0.037759 | 0.0 | 0.14 Comm | 0.052051 | 0.052051 | 0.052051 | 0.0 | 0.19 Output | 4.41e-05 | 4.41e-05 | 4.41e-05 | 0.0 | 0.00 Modify | 0.32289 | 0.32289 | 0.32289 | 0.0 | 1.18 Other | | 0.03435 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6534.00 ave 6534 max 6534 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265342.0 ave 265342 max 265342 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265342 Ave neighs/atom = 33.167750 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.757042200902, Press = -0.477377804748485 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.316 | 4.316 | 4.316 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -24368.705 -24368.705 -24714.587 -24714.587 334.52424 334.52424 287873.54 287873.54 246.79818 246.79818 18000 -24369.977 -24369.977 -24713.444 -24713.444 332.18906 332.18906 288326.5 288326.5 -331.53493 -331.53493 Loop time of 27.1 on 1 procs for 1000 steps with 8000 atoms Performance: 3.188 ns/day, 7.528 hours/ns, 36.900 timesteps/s 98.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.654 | 26.654 | 26.654 | 0.0 | 98.36 Neigh | 0.038624 | 0.038624 | 0.038624 | 0.0 | 0.14 Comm | 0.052327 | 0.052327 | 0.052327 | 0.0 | 0.19 Output | 4.54e-05 | 4.54e-05 | 4.54e-05 | 0.0 | 0.00 Modify | 0.32103 | 0.32103 | 0.32103 | 0.0 | 1.18 Other | | 0.03359 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6542.00 ave 6542 max 6542 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265170.0 ave 265170 max 265170 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265170 Ave neighs/atom = 33.146250 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.787349484308, Press = 0.207638124449536 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.316 | 4.316 | 4.316 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -24369.977 -24369.977 -24713.444 -24713.444 332.18906 332.18906 288326.5 288326.5 -331.53493 -331.53493 19000 -24376.12 -24376.12 -24716.6 -24716.6 329.29985 329.29985 288085.84 288085.84 -21.930305 -21.930305 Loop time of 26.9398 on 1 procs for 1000 steps with 8000 atoms Performance: 3.207 ns/day, 7.483 hours/ns, 37.120 timesteps/s 98.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.485 | 26.485 | 26.485 | 0.0 | 98.31 Neigh | 0.031652 | 0.031652 | 0.031652 | 0.0 | 0.12 Comm | 0.051825 | 0.051825 | 0.051825 | 0.0 | 0.19 Output | 4.9e-05 | 4.9e-05 | 4.9e-05 | 0.0 | 0.00 Modify | 0.33726 | 0.33726 | 0.33726 | 0.0 | 1.25 Other | | 0.03355 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6531.00 ave 6531 max 6531 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 264848.0 ave 264848 max 264848 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 264848 Ave neighs/atom = 33.106000 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.939471068736, Press = 0.726274647358186 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.316 | 4.316 | 4.316 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -24376.12 -24376.12 -24716.6 -24716.6 329.29985 329.29985 288085.84 288085.84 -21.930305 -21.930305 20000 -24380.293 -24380.293 -24726.755 -24726.755 335.08481 335.08481 287977.34 287977.34 98.432905 98.432905 Loop time of 27.0567 on 1 procs for 1000 steps with 8000 atoms Performance: 3.193 ns/day, 7.516 hours/ns, 36.959 timesteps/s 98.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.616 | 26.616 | 26.616 | 0.0 | 98.37 Neigh | 0.034206 | 0.034206 | 0.034206 | 0.0 | 0.13 Comm | 0.051521 | 0.051521 | 0.051521 | 0.0 | 0.19 Output | 4.66e-05 | 4.66e-05 | 4.66e-05 | 0.0 | 0.00 Modify | 0.32147 | 0.32147 | 0.32147 | 0.0 | 1.19 Other | | 0.03365 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6566.00 ave 6566 max 6566 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265276.0 ave 265276 max 265276 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265276 Ave neighs/atom = 33.159500 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.019117634973, Press = 0.774716790257648 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.316 | 4.316 | 4.316 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -24380.293 -24380.293 -24726.755 -24726.755 335.08481 335.08481 287977.34 287977.34 98.432905 98.432905 21000 -24367.129 -24367.129 -24714.237 -24714.237 335.71046 335.71046 287918.64 287918.64 258.49751 258.49751 Loop time of 27.3546 on 1 procs for 1000 steps with 8000 atoms Performance: 3.159 ns/day, 7.599 hours/ns, 36.557 timesteps/s 97.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.885 | 26.885 | 26.885 | 0.0 | 98.28 Neigh | 0.037675 | 0.037675 | 0.037675 | 0.0 | 0.14 Comm | 0.051757 | 0.051757 | 0.051757 | 0.0 | 0.19 Output | 6.23e-05 | 6.23e-05 | 6.23e-05 | 0.0 | 0.00 Modify | 0.34617 | 0.34617 | 0.34617 | 0.0 | 1.27 Other | | 0.03351 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6538.00 ave 6538 max 6538 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265034.0 ave 265034 max 265034 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265034 Ave neighs/atom = 33.129250 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T333.15.out" else "print 'not_converged' file output/vol_T333.15.out" print '${V}' file output/vol_T333.15.out 288070.588572545 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0