# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 6.581419467926026*${_u_distance} variable latticeconst_converted equal 6.581419467926026*1 lattice diamond ${latticeconst_converted} lattice diamond 6.58141946792603 Lattice spacing in x,y,z = 6.5814195 6.5814195 6.5814195 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (65.814195 65.814195 65.814195) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms using lattice units in orthogonal box = (0 0 0) to (65.814195 65.814195 65.814195) create_atoms CPU = 0.012 seconds variable mass_converted equal 118.71*${_u_mass} variable mass_converted equal 118.71*1 kim_interactions Sn WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Sn #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_KimKoLee_2020_NaSn__MO_329881861557_002 pair_coeff * * Sn #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 118.71 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 285074.72533011 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 285074.72533011/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 285074.72533011/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 285074.72533011/(1*1*${_u_distance}) variable V0_metal equal 285074.72533011/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 285074.72533011*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 285074.72533011 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 293.15*${_u_temperature} variable temp_converted equal 293.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 293.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "293.15 - 0.2" variable T_up equal "293.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_329881861557_002#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.314 | 4.314 | 4.314 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -24774.402 -24774.402 -25077.505 -25077.505 293.15 293.15 285074.73 285074.73 1135.6601 1135.6601 1000 -24447.576 -24447.576 -24773.503 -24773.503 315.22398 315.22398 287747.45 287747.45 -576.57819 -576.57819 Loop time of 122.43 on 1 procs for 1000 steps with 8000 atoms Performance: 0.706 ns/day, 34.008 hours/ns, 8.168 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 120.75 | 120.75 | 120.75 | 0.0 | 98.62 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20477 | 0.20477 | 0.20477 | 0.0 | 0.17 Output | 0.00032779 | 0.00032779 | 0.00032779 | 0.0 | 0.00 Modify | 1.3182 | 1.3182 | 1.3182 | 0.0 | 1.08 Other | | 0.1605 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 272000 ave 272000 max 272000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 272000 Ave neighs/atom = 34 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -24447.576 -24447.576 -24773.503 -24773.503 315.22398 315.22398 287747.45 287747.45 -576.57819 -576.57819 2000 -24460.131 -24460.131 -24752.9 -24752.9 283.1559 283.1559 287497.74 287497.74 363.00656 363.00656 Loop time of 115.867 on 1 procs for 1000 steps with 8000 atoms Performance: 0.746 ns/day, 32.185 hours/ns, 8.631 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 114.09 | 114.09 | 114.09 | 0.0 | 98.47 Neigh | 0.15709 | 0.15709 | 0.15709 | 0.0 | 0.14 Comm | 0.19651 | 0.19651 | 0.19651 | 0.0 | 0.17 Output | 0.00027562 | 0.00027562 | 0.00027562 | 0.0 | 0.00 Modify | 1.2671 | 1.2671 | 1.2671 | 0.0 | 1.09 Other | | 0.1567 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6559 ave 6559 max 6559 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 266154 ave 266154 max 266154 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266154 Ave neighs/atom = 33.26925 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -24460.131 -24460.131 -24752.9 -24752.9 283.1559 283.1559 287497.74 287497.74 363.00656 363.00656 3000 -24449.882 -24449.882 -24760.597 -24760.597 300.5124 300.5124 287547.36 287547.36 48.4113 48.4113 Loop time of 116.195 on 1 procs for 1000 steps with 8000 atoms Performance: 0.744 ns/day, 32.276 hours/ns, 8.606 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 114.42 | 114.42 | 114.42 | 0.0 | 98.47 Neigh | 0.1572 | 0.1572 | 0.1572 | 0.0 | 0.14 Comm | 0.19934 | 0.19934 | 0.19934 | 0.0 | 0.17 Output | 0.00032014 | 0.00032014 | 0.00032014 | 0.0 | 0.00 Modify | 1.2657 | 1.2657 | 1.2657 | 0.0 | 1.09 Other | | 0.1567 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6566 ave 6566 max 6566 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265976 ave 265976 max 265976 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265976 Ave neighs/atom = 33.247 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -24449.882 -24449.882 -24760.597 -24760.597 300.5124 300.5124 287547.36 287547.36 48.4113 48.4113 4000 -24442.611 -24442.611 -24765.415 -24765.415 312.20445 312.20445 287897.4 287897.4 109.68561 109.68561 Loop time of 116.21 on 1 procs for 1000 steps with 8000 atoms Performance: 0.743 ns/day, 32.281 hours/ns, 8.605 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 114.43 | 114.43 | 114.43 | 0.0 | 98.47 Neigh | 0.15709 | 0.15709 | 0.15709 | 0.0 | 0.14 Comm | 0.19758 | 0.19758 | 0.19758 | 0.0 | 0.17 Output | 0.00031997 | 0.00031997 | 0.00031997 | 0.0 | 0.00 Modify | 1.2665 | 1.2665 | 1.2665 | 0.0 | 1.09 Other | | 0.1563 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6588 ave 6588 max 6588 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 266136 ave 266136 max 266136 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266136 Ave neighs/atom = 33.267 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -24442.611 -24442.611 -24765.415 -24765.415 312.20445 312.20445 287897.4 287897.4 109.68561 109.68561 5000 -24469.48 -24469.48 -24766.383 -24766.383 287.15403 287.15403 287666.32 287666.32 29.930674 29.930674 Loop time of 116.29 on 1 procs for 1000 steps with 8000 atoms Performance: 0.743 ns/day, 32.303 hours/ns, 8.599 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 114.51 | 114.51 | 114.51 | 0.0 | 98.47 Neigh | 0.15714 | 0.15714 | 0.15714 | 0.0 | 0.14 Comm | 0.19742 | 0.19742 | 0.19742 | 0.0 | 0.17 Output | 0.00028147 | 0.00028147 | 0.00028147 | 0.0 | 0.00 Modify | 1.2707 | 1.2707 | 1.2707 | 0.0 | 1.09 Other | | 0.1569 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6601 ave 6601 max 6601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 266150 ave 266150 max 266150 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266150 Ave neighs/atom = 33.26875 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 287.323126785702, Press = 38.4474828732052 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -24469.48 -24469.48 -24766.383 -24766.383 287.15403 287.15403 287666.32 287666.32 29.930674 29.930674 6000 -24456.104 -24456.104 -24756.239 -24756.239 290.27946 290.27946 287705.26 287705.26 -103.13002 -103.13002 Loop time of 116.282 on 1 procs for 1000 steps with 8000 atoms Performance: 0.743 ns/day, 32.301 hours/ns, 8.600 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 114.47 | 114.47 | 114.47 | 0.0 | 98.44 Neigh | 0.1573 | 0.1573 | 0.1573 | 0.0 | 0.14 Comm | 0.19851 | 0.19851 | 0.19851 | 0.0 | 0.17 Output | 0.0002354 | 0.0002354 | 0.0002354 | 0.0 | 0.00 Modify | 1.3036 | 1.3036 | 1.3036 | 0.0 | 1.12 Other | | 0.1567 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6593 ave 6593 max 6593 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265960 ave 265960 max 265960 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265960 Ave neighs/atom = 33.245 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 291.816287779922, Press = 2.1261384641324 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -24456.104 -24456.104 -24756.239 -24756.239 290.27946 290.27946 287705.26 287705.26 -103.13002 -103.13002 7000 -24466.797 -24466.797 -24764.552 -24764.552 287.97754 287.97754 287429.46 287429.46 323.52836 323.52836 Loop time of 116.192 on 1 procs for 1000 steps with 8000 atoms Performance: 0.744 ns/day, 32.276 hours/ns, 8.606 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 114.38 | 114.38 | 114.38 | 0.0 | 98.44 Neigh | 0.1572 | 0.1572 | 0.1572 | 0.0 | 0.14 Comm | 0.19641 | 0.19641 | 0.19641 | 0.0 | 0.17 Output | 0.0002375 | 0.0002375 | 0.0002375 | 0.0 | 0.00 Modify | 1.3032 | 1.3032 | 1.3032 | 0.0 | 1.12 Other | | 0.1577 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6567 ave 6567 max 6567 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 266302 ave 266302 max 266302 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266302 Ave neighs/atom = 33.28775 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.843506151349, Press = -0.470137216381254 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -24466.797 -24466.797 -24764.552 -24764.552 287.97754 287.97754 287429.46 287429.46 323.52836 323.52836 8000 -24463.174 -24463.174 -24767.65 -24767.65 294.47733 294.47733 287553.59 287553.59 233.1611 233.1611 Loop time of 116.339 on 1 procs for 1000 steps with 8000 atoms Performance: 0.743 ns/day, 32.317 hours/ns, 8.596 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 114.53 | 114.53 | 114.53 | 0.0 | 98.44 Neigh | 0.15693 | 0.15693 | 0.15693 | 0.0 | 0.13 Comm | 0.19812 | 0.19812 | 0.19812 | 0.0 | 0.17 Output | 0.00023561 | 0.00023561 | 0.00023561 | 0.0 | 0.00 Modify | 1.3019 | 1.3019 | 1.3019 | 0.0 | 1.12 Other | | 0.1564 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6628 ave 6628 max 6628 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 266466 ave 266466 max 266466 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266466 Ave neighs/atom = 33.30825 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.086600787088, Press = 1.89354912455975 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -24463.174 -24463.174 -24767.65 -24767.65 294.47733 294.47733 287553.59 287553.59 233.1611 233.1611 9000 -24456.149 -24456.149 -24759.303 -24759.303 293.20012 293.20012 287463.52 287463.52 286.65028 286.65028 Loop time of 116.161 on 1 procs for 1000 steps with 8000 atoms Performance: 0.744 ns/day, 32.267 hours/ns, 8.609 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 114.4 | 114.4 | 114.4 | 0.0 | 98.48 Neigh | 0.10471 | 0.10471 | 0.10471 | 0.0 | 0.09 Comm | 0.19676 | 0.19676 | 0.19676 | 0.0 | 0.17 Output | 0.00023439 | 0.00023439 | 0.00023439 | 0.0 | 0.00 Modify | 1.3049 | 1.3049 | 1.3049 | 0.0 | 1.12 Other | | 0.1563 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6561 ave 6561 max 6561 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 266170 ave 266170 max 266170 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266170 Ave neighs/atom = 33.27125 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.895843089897, Press = 3.15291413896152 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -24456.149 -24456.149 -24759.303 -24759.303 293.20012 293.20012 287463.52 287463.52 286.65028 286.65028 10000 -24465.174 -24465.174 -24764.982 -24764.982 289.96301 289.96301 287609.39 287609.39 -42.848729 -42.848729 Loop time of 124.43 on 1 procs for 1000 steps with 8000 atoms Performance: 0.694 ns/day, 34.564 hours/ns, 8.037 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 122.43 | 122.43 | 122.43 | 0.0 | 98.40 Neigh | 0.16237 | 0.16237 | 0.16237 | 0.0 | 0.13 Comm | 0.21282 | 0.21282 | 0.21282 | 0.0 | 0.17 Output | 0.00023138 | 0.00023138 | 0.00023138 | 0.0 | 0.00 Modify | 1.4525 | 1.4525 | 1.4525 | 0.0 | 1.17 Other | | 0.1683 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6562 ave 6562 max 6562 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265906 ave 265906 max 265906 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265906 Ave neighs/atom = 33.23825 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.099930378021, Press = 1.06284573620895 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -24465.174 -24465.174 -24764.982 -24764.982 289.96301 289.96301 287609.39 287609.39 -42.848729 -42.848729 11000 -24464.99 -24464.99 -24771.348 -24771.348 296.29772 296.29772 287786.33 287786.33 -87.445013 -87.445013 Loop time of 116.274 on 1 procs for 1000 steps with 8000 atoms Performance: 0.743 ns/day, 32.298 hours/ns, 8.600 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 114.46 | 114.46 | 114.46 | 0.0 | 98.44 Neigh | 0.15724 | 0.15724 | 0.15724 | 0.0 | 0.14 Comm | 0.19882 | 0.19882 | 0.19882 | 0.0 | 0.17 Output | 0.00028379 | 0.00028379 | 0.00028379 | 0.0 | 0.00 Modify | 1.3035 | 1.3035 | 1.3035 | 0.0 | 1.12 Other | | 0.1565 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6583 ave 6583 max 6583 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 266204 ave 266204 max 266204 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266204 Ave neighs/atom = 33.2755 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.151301918363, Press = 0.444170995748164 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -24464.99 -24464.99 -24771.348 -24771.348 296.29772 296.29772 287786.33 287786.33 -87.445013 -87.445013 12000 -24462.677 -24462.677 -24768.832 -24768.832 296.10127 296.10127 287703.01 287703.01 18.171585 18.171585 Loop time of 130.291 on 1 procs for 1000 steps with 8000 atoms Performance: 0.663 ns/day, 36.192 hours/ns, 7.675 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 128.17 | 128.17 | 128.17 | 0.0 | 98.37 Neigh | 0.1727 | 0.1727 | 0.1727 | 0.0 | 0.13 Comm | 0.22109 | 0.22109 | 0.22109 | 0.0 | 0.17 Output | 0.00023902 | 0.00023902 | 0.00023902 | 0.0 | 0.00 Modify | 1.554 | 1.554 | 1.554 | 0.0 | 1.19 Other | | 0.1746 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6579 ave 6579 max 6579 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 266164 ave 266164 max 266164 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266164 Ave neighs/atom = 33.2705 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.027917176437, Press = 0.501036953414554 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -24462.677 -24462.677 -24768.832 -24768.832 296.10127 296.10127 287703.01 287703.01 18.171585 18.171585 13000 -24464.234 -24464.234 -24766.42 -24766.42 292.26318 292.26318 287663.94 287663.94 0.61592176 0.61592176 Loop time of 123.588 on 1 procs for 1000 steps with 8000 atoms Performance: 0.699 ns/day, 34.330 hours/ns, 8.091 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 121.61 | 121.61 | 121.61 | 0.0 | 98.40 Neigh | 0.16243 | 0.16243 | 0.16243 | 0.0 | 0.13 Comm | 0.21466 | 0.21466 | 0.21466 | 0.0 | 0.17 Output | 0.00031591 | 0.00031591 | 0.00031591 | 0.0 | 0.00 Modify | 1.4362 | 1.4362 | 1.4362 | 0.0 | 1.16 Other | | 0.1636 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6590 ave 6590 max 6590 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265992 ave 265992 max 265992 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265992 Ave neighs/atom = 33.249 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.974659454078, Press = 0.74194506081654 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -24464.234 -24464.234 -24766.42 -24766.42 292.26318 292.26318 287663.94 287663.94 0.61592176 0.61592176 14000 -24457.24 -24457.24 -24764.6 -24764.6 297.2673 297.2673 287955.67 287955.67 -391.14008 -391.14008 Loop time of 135.307 on 1 procs for 1000 steps with 8000 atoms Performance: 0.639 ns/day, 37.585 hours/ns, 7.391 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 133.07 | 133.07 | 133.07 | 0.0 | 98.35 Neigh | 0.17187 | 0.17187 | 0.17187 | 0.0 | 0.13 Comm | 0.22987 | 0.22987 | 0.22987 | 0.0 | 0.17 Output | 0.00031614 | 0.00031614 | 0.00031614 | 0.0 | 0.00 Modify | 1.6524 | 1.6524 | 1.6524 | 0.0 | 1.22 Other | | 0.18 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6574 ave 6574 max 6574 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 266162 ave 266162 max 266162 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266162 Ave neighs/atom = 33.27025 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.90684312503, Press = 0.922139645499129 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -24457.24 -24457.24 -24764.6 -24764.6 297.2673 297.2673 287955.67 287955.67 -391.14008 -391.14008 15000 -24465.712 -24465.712 -24765.475 -24765.475 289.92013 289.92013 287966.44 287966.44 -325.5335 -325.5335 Loop time of 135.238 on 1 procs for 1000 steps with 8000 atoms Performance: 0.639 ns/day, 37.566 hours/ns, 7.394 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 133.01 | 133.01 | 133.01 | 0.0 | 98.35 Neigh | 0.17296 | 0.17296 | 0.17296 | 0.0 | 0.13 Comm | 0.23064 | 0.23064 | 0.23064 | 0.0 | 0.17 Output | 0.00036235 | 0.00036235 | 0.00036235 | 0.0 | 0.00 Modify | 1.6464 | 1.6464 | 1.6464 | 0.0 | 1.22 Other | | 0.1799 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6605 ave 6605 max 6605 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 266090 ave 266090 max 266090 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266090 Ave neighs/atom = 33.26125 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.895981000764, Press = 0.177323710081767 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -24465.712 -24465.712 -24765.475 -24765.475 289.92013 289.92013 287966.44 287966.44 -325.5335 -325.5335 16000 -24455.552 -24455.552 -24763.948 -24763.948 298.26928 298.26928 288039.86 288039.86 -373.44283 -373.44283 Loop time of 135.363 on 1 procs for 1000 steps with 8000 atoms Performance: 0.638 ns/day, 37.601 hours/ns, 7.388 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 133.11 | 133.11 | 133.11 | 0.0 | 98.34 Neigh | 0.17169 | 0.17169 | 0.17169 | 0.0 | 0.13 Comm | 0.23308 | 0.23308 | 0.23308 | 0.0 | 0.17 Output | 0.00024724 | 0.00024724 | 0.00024724 | 0.0 | 0.00 Modify | 1.6637 | 1.6637 | 1.6637 | 0.0 | 1.23 Other | | 0.1808 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6555 ave 6555 max 6555 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265750 ave 265750 max 265750 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265750 Ave neighs/atom = 33.21875 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.882480394733, Press = -0.124626601499202 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -24455.552 -24455.552 -24763.948 -24763.948 298.26928 298.26928 288039.86 288039.86 -373.44283 -373.44283 17000 -24455.449 -24455.449 -24765.805 -24765.805 300.16488 300.16488 287967.61 287967.61 -297.81448 -297.81448 Loop time of 135.123 on 1 procs for 1000 steps with 8000 atoms Performance: 0.639 ns/day, 37.534 hours/ns, 7.401 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 132.95 | 132.95 | 132.95 | 0.0 | 98.39 Neigh | 0.11457 | 0.11457 | 0.11457 | 0.0 | 0.08 Comm | 0.22871 | 0.22871 | 0.22871 | 0.0 | 0.17 Output | 0.00038407 | 0.00038407 | 0.00038407 | 0.0 | 0.00 Modify | 1.652 | 1.652 | 1.652 | 0.0 | 1.22 Other | | 0.181 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6577 ave 6577 max 6577 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 266478 ave 266478 max 266478 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266478 Ave neighs/atom = 33.30975 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.828836460609, Press = -0.305201352713104 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -24455.449 -24455.449 -24765.805 -24765.805 300.16488 300.16488 287967.61 287967.61 -297.81448 -297.81448 18000 -24454.229 -24454.229 -24762.676 -24762.676 298.31866 298.31866 287728.87 287728.87 22.620163 22.620163 Loop time of 135.057 on 1 procs for 1000 steps with 8000 atoms Performance: 0.640 ns/day, 37.516 hours/ns, 7.404 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 132.9 | 132.9 | 132.9 | 0.0 | 98.40 Neigh | 0.11572 | 0.11572 | 0.11572 | 0.0 | 0.09 Comm | 0.22695 | 0.22695 | 0.22695 | 0.0 | 0.17 Output | 0.00024288 | 0.00024288 | 0.00024288 | 0.0 | 0.00 Modify | 1.6346 | 1.6346 | 1.6346 | 0.0 | 1.21 Other | | 0.181 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6584 ave 6584 max 6584 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265766 ave 265766 max 265766 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265766 Ave neighs/atom = 33.22075 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.847239406929, Press = -0.458929234131702 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -24454.229 -24454.229 -24762.676 -24762.676 298.31866 298.31866 287728.87 287728.87 22.620163 22.620163 19000 -24454.689 -24454.689 -24759.601 -24759.601 294.89965 294.89965 287552.43 287552.43 191.03307 191.03307 Loop time of 134.364 on 1 procs for 1000 steps with 8000 atoms Performance: 0.643 ns/day, 37.323 hours/ns, 7.442 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 132.14 | 132.14 | 132.14 | 0.0 | 98.34 Neigh | 0.17059 | 0.17059 | 0.17059 | 0.0 | 0.13 Comm | 0.22825 | 0.22825 | 0.22825 | 0.0 | 0.17 Output | 0.00036171 | 0.00036171 | 0.00036171 | 0.0 | 0.00 Modify | 1.6423 | 1.6423 | 1.6423 | 0.0 | 1.22 Other | | 0.1823 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6531 ave 6531 max 6531 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 266016 ave 266016 max 266016 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266016 Ave neighs/atom = 33.252 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.956790309158, Press = -0.521860781689937 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -24454.689 -24454.689 -24759.601 -24759.601 294.89965 294.89965 287552.43 287552.43 191.03307 191.03307 20000 -24465.585 -24465.585 -24768.626 -24768.626 293.08981 293.08981 287301.3 287301.3 517.43855 517.43855 Loop time of 134.58 on 1 procs for 1000 steps with 8000 atoms Performance: 0.642 ns/day, 37.383 hours/ns, 7.430 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 132.35 | 132.35 | 132.35 | 0.0 | 98.34 Neigh | 0.17183 | 0.17183 | 0.17183 | 0.0 | 0.13 Comm | 0.22982 | 0.22982 | 0.22982 | 0.0 | 0.17 Output | 0.00032659 | 0.00032659 | 0.00032659 | 0.0 | 0.00 Modify | 1.6451 | 1.6451 | 1.6451 | 0.0 | 1.22 Other | | 0.182 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6583 ave 6583 max 6583 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265894 ave 265894 max 265894 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265894 Ave neighs/atom = 33.23675 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.030809282722, Press = -0.388704468048033 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -24465.585 -24465.585 -24768.626 -24768.626 293.08981 293.08981 287301.3 287301.3 517.43855 517.43855 21000 -24455.134 -24455.134 -24763.015 -24763.015 297.7708 297.7708 287718.54 287718.54 80.522415 80.522415 Loop time of 132.462 on 1 procs for 1000 steps with 8000 atoms Performance: 0.652 ns/day, 36.795 hours/ns, 7.549 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 130.28 | 130.28 | 130.28 | 0.0 | 98.36 Neigh | 0.16754 | 0.16754 | 0.16754 | 0.0 | 0.13 Comm | 0.22888 | 0.22888 | 0.22888 | 0.0 | 0.17 Output | 0.00036413 | 0.00036413 | 0.00036413 | 0.0 | 0.00 Modify | 1.6022 | 1.6022 | 1.6022 | 0.0 | 1.21 Other | | 0.1794 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6571 ave 6571 max 6571 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265932 ave 265932 max 265932 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265932 Ave neighs/atom = 33.2415 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T293.15.out" else "print 'not_converged' file output/vol_T293.15.out" print '${V}' file output/vol_T293.15.out 287695.776489124 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0