# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 6.581419467926026*${_u_distance} variable latticeconst_converted equal 6.581419467926026*1 lattice diamond ${latticeconst_converted} lattice diamond 6.58141946792603 Lattice spacing in x,y,z = 6.5814195 6.5814195 6.5814195 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (65.814195 65.814195 65.814195) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms using lattice units in orthogonal box = (0 0 0) to (65.814195 65.814195 65.814195) create_atoms CPU = 0.012 seconds variable mass_converted equal 118.71*${_u_mass} variable mass_converted equal 118.71*1 kim_interactions Sn WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Sn #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_KimKoLee_2020_NaSn__MO_329881861557_002 pair_coeff * * Sn #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 118.71 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 285074.72533011 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 285074.72533011/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 285074.72533011/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 285074.72533011/(1*1*${_u_distance}) variable V0_metal equal 285074.72533011/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 285074.72533011*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 285074.72533011 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_329881861557_002#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.314 | 4.314 | 4.314 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -24753.723 -24753.723 -25077.505 -25077.505 313.15 313.15 285074.73 285074.73 1213.1403 1213.1403 1000 -24403.764 -24403.764 -24748.945 -24748.945 333.84632 333.84632 287931.57 287931.57 -536.44474 -536.44474 Loop time of 120.876 on 1 procs for 1000 steps with 8000 atoms Performance: 0.715 ns/day, 33.577 hours/ns, 8.273 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 119.15 | 119.15 | 119.15 | 0.0 | 98.57 Neigh | 0.0522 | 0.0522 | 0.0522 | 0.0 | 0.04 Comm | 0.20786 | 0.20786 | 0.20786 | 0.0 | 0.17 Output | 0.00029578 | 0.00029578 | 0.00029578 | 0.0 | 0.00 Modify | 1.3069 | 1.3069 | 1.3069 | 0.0 | 1.08 Other | | 0.1581 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6565 ave 6565 max 6565 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265856 ave 265856 max 265856 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265856 Ave neighs/atom = 33.232 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -24403.764 -24403.764 -24748.945 -24748.945 333.84632 333.84632 287931.57 287931.57 -536.44474 -536.44474 2000 -24417.139 -24417.139 -24729.453 -24729.453 302.05786 302.05786 287734.55 287734.55 286.71663 286.71663 Loop time of 115.017 on 1 procs for 1000 steps with 8000 atoms Performance: 0.751 ns/day, 31.949 hours/ns, 8.694 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 113.23 | 113.23 | 113.23 | 0.0 | 98.44 Neigh | 0.15725 | 0.15725 | 0.15725 | 0.0 | 0.14 Comm | 0.20242 | 0.20242 | 0.20242 | 0.0 | 0.18 Output | 0.00027986 | 0.00027986 | 0.00027986 | 0.0 | 0.00 Modify | 1.2751 | 1.2751 | 1.2751 | 0.0 | 1.11 Other | | 0.1553 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6544 ave 6544 max 6544 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265632 ave 265632 max 265632 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265632 Ave neighs/atom = 33.204 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -24417.139 -24417.139 -24729.453 -24729.453 302.05786 302.05786 287734.55 287734.55 286.71663 286.71663 3000 -24407.269 -24407.269 -24738.728 -24738.728 320.57543 320.57543 287836.47 287836.47 -128.59684 -128.59684 Loop time of 115.326 on 1 procs for 1000 steps with 8000 atoms Performance: 0.749 ns/day, 32.035 hours/ns, 8.671 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 113.53 | 113.53 | 113.53 | 0.0 | 98.45 Neigh | 0.15742 | 0.15742 | 0.15742 | 0.0 | 0.14 Comm | 0.20435 | 0.20435 | 0.20435 | 0.0 | 0.18 Output | 0.00027993 | 0.00027993 | 0.00027993 | 0.0 | 0.00 Modify | 1.2753 | 1.2753 | 1.2753 | 0.0 | 1.11 Other | | 0.1549 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6572 ave 6572 max 6572 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265810 ave 265810 max 265810 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265810 Ave neighs/atom = 33.22625 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -24407.269 -24407.269 -24738.728 -24738.728 320.57543 320.57543 287836.47 287836.47 -128.59684 -128.59684 4000 -24397.665 -24397.665 -24741.728 -24741.728 332.76536 332.76536 288200.48 288200.48 -20.513549 -20.513549 Loop time of 115.317 on 1 procs for 1000 steps with 8000 atoms Performance: 0.749 ns/day, 32.032 hours/ns, 8.672 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 113.53 | 113.53 | 113.53 | 0.0 | 98.45 Neigh | 0.1574 | 0.1574 | 0.1574 | 0.0 | 0.14 Comm | 0.20282 | 0.20282 | 0.20282 | 0.0 | 0.18 Output | 0.00028028 | 0.00028028 | 0.00028028 | 0.0 | 0.00 Modify | 1.2738 | 1.2738 | 1.2738 | 0.0 | 1.10 Other | | 0.1557 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6529 ave 6529 max 6529 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265728 ave 265728 max 265728 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265728 Ave neighs/atom = 33.216 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -24397.665 -24397.665 -24741.728 -24741.728 332.76536 332.76536 288200.48 288200.48 -20.513549 -20.513549 5000 -24427.189 -24427.189 -24741.705 -24741.705 304.18793 304.18793 287899.05 287899.05 -25.516754 -25.516754 Loop time of 115.415 on 1 procs for 1000 steps with 8000 atoms Performance: 0.749 ns/day, 32.060 hours/ns, 8.664 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 113.62 | 113.62 | 113.62 | 0.0 | 98.45 Neigh | 0.15719 | 0.15719 | 0.15719 | 0.0 | 0.14 Comm | 0.20327 | 0.20327 | 0.20327 | 0.0 | 0.18 Output | 0.00023958 | 0.00023958 | 0.00023958 | 0.0 | 0.00 Modify | 1.2787 | 1.2787 | 1.2787 | 0.0 | 1.11 Other | | 0.1551 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6580 ave 6580 max 6580 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265646 ave 265646 max 265646 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265646 Ave neighs/atom = 33.20575 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 307.487577866325, Press = 1.46556547185963 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -24427.189 -24427.189 -24741.705 -24741.705 304.18793 304.18793 287899.05 287899.05 -25.516754 -25.516754 6000 -24415.464 -24415.464 -24733.461 -24733.461 307.55513 307.55513 287870.83 287870.83 -101.79273 -101.79273 Loop time of 115.455 on 1 procs for 1000 steps with 8000 atoms Performance: 0.748 ns/day, 32.071 hours/ns, 8.661 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 113.63 | 113.63 | 113.63 | 0.0 | 98.42 Neigh | 0.15738 | 0.15738 | 0.15738 | 0.0 | 0.14 Comm | 0.20402 | 0.20402 | 0.20402 | 0.0 | 0.18 Output | 0.00024775 | 0.00024775 | 0.00024775 | 0.0 | 0.00 Modify | 1.3118 | 1.3118 | 1.3118 | 0.0 | 1.14 Other | | 0.1558 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6566 ave 6566 max 6566 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265752 ave 265752 max 265752 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265752 Ave neighs/atom = 33.219 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 311.757908811524, Press = 4.0008932157489 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -24415.464 -24415.464 -24733.461 -24733.461 307.55513 307.55513 287870.83 287870.83 -101.79273 -101.79273 7000 -24423.679 -24423.679 -24741.205 -24741.205 307.09927 307.09927 287788.73 287788.73 129.79674 129.79674 Loop time of 131.681 on 1 procs for 1000 steps with 8000 atoms Performance: 0.656 ns/day, 36.578 hours/ns, 7.594 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 129.5 | 129.5 | 129.5 | 0.0 | 98.34 Neigh | 0.17375 | 0.17375 | 0.17375 | 0.0 | 0.13 Comm | 0.23383 | 0.23383 | 0.23383 | 0.0 | 0.18 Output | 0.00033201 | 0.00033201 | 0.00033201 | 0.0 | 0.00 Modify | 1.5997 | 1.5997 | 1.5997 | 0.0 | 1.21 Other | | 0.1779 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6580 ave 6580 max 6580 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265418 ave 265418 max 265418 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265418 Ave neighs/atom = 33.17725 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.864403884443, Press = -2.24322127905382 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -24423.679 -24423.679 -24741.205 -24741.205 307.09927 307.09927 287788.73 287788.73 129.79674 129.79674 8000 -24419.488 -24419.488 -24746.517 -24746.517 316.29038 316.29038 287884.13 287884.13 53.101483 53.101483 Loop time of 135.476 on 1 procs for 1000 steps with 8000 atoms Performance: 0.638 ns/day, 37.632 hours/ns, 7.381 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 133.21 | 133.21 | 133.21 | 0.0 | 98.33 Neigh | 0.17532 | 0.17532 | 0.17532 | 0.0 | 0.13 Comm | 0.2381 | 0.2381 | 0.2381 | 0.0 | 0.18 Output | 0.00032589 | 0.00032589 | 0.00032589 | 0.0 | 0.00 Modify | 1.6682 | 1.6682 | 1.6682 | 0.0 | 1.23 Other | | 0.1828 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6611 ave 6611 max 6611 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 266024 ave 266024 max 266024 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 266024 Ave neighs/atom = 33.253 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.062072758144, Press = -1.30022363559056 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -24419.488 -24419.488 -24746.517 -24746.517 316.29038 316.29038 287884.13 287884.13 53.101483 53.101483 9000 -24415.342 -24415.342 -24738.619 -24738.619 312.66176 312.66176 287706.01 287706.01 181.73928 181.73928 Loop time of 135.456 on 1 procs for 1000 steps with 8000 atoms Performance: 0.638 ns/day, 37.627 hours/ns, 7.382 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 133.19 | 133.19 | 133.19 | 0.0 | 98.32 Neigh | 0.17475 | 0.17475 | 0.17475 | 0.0 | 0.13 Comm | 0.23805 | 0.23805 | 0.23805 | 0.0 | 0.18 Output | 0.00025086 | 0.00025086 | 0.00025086 | 0.0 | 0.00 Modify | 1.6744 | 1.6744 | 1.6744 | 0.0 | 1.24 Other | | 0.1816 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6553 ave 6553 max 6553 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265564 ave 265564 max 265564 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265564 Ave neighs/atom = 33.1955 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.862576677494, Press = -2.94272363234461 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -24415.342 -24415.342 -24738.619 -24738.619 312.66176 312.66176 287706.01 287706.01 181.73928 181.73928 10000 -24420.903 -24420.903 -24739.419 -24739.419 308.05677 308.05677 287950.35 287950.35 -147.51352 -147.51352 Loop time of 135.206 on 1 procs for 1000 steps with 8000 atoms Performance: 0.639 ns/day, 37.557 hours/ns, 7.396 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 132.95 | 132.95 | 132.95 | 0.0 | 98.33 Neigh | 0.17587 | 0.17587 | 0.17587 | 0.0 | 0.13 Comm | 0.23772 | 0.23772 | 0.23772 | 0.0 | 0.18 Output | 0.00028211 | 0.00028211 | 0.00028211 | 0.0 | 0.00 Modify | 1.6555 | 1.6555 | 1.6555 | 0.0 | 1.22 Other | | 0.1818 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6557 ave 6557 max 6557 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265776 ave 265776 max 265776 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265776 Ave neighs/atom = 33.222 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.106792821397, Press = -4.57011800312428 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -24420.903 -24420.903 -24739.419 -24739.419 308.05677 308.05677 287950.35 287950.35 -147.51352 -147.51352 11000 -24420.199 -24420.199 -24747.981 -24747.981 317.01868 317.01868 288073.4 288073.4 -273.71308 -273.71308 Loop time of 128.692 on 1 procs for 1000 steps with 8000 atoms Performance: 0.671 ns/day, 35.748 hours/ns, 7.770 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 126.58 | 126.58 | 126.58 | 0.0 | 98.35 Neigh | 0.16768 | 0.16768 | 0.16768 | 0.0 | 0.13 Comm | 0.23168 | 0.23168 | 0.23168 | 0.0 | 0.18 Output | 0.00023753 | 0.00023753 | 0.00023753 | 0.0 | 0.00 Modify | 1.5451 | 1.5451 | 1.5451 | 0.0 | 1.20 Other | | 0.1724 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6581 ave 6581 max 6581 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265392 ave 265392 max 265392 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265392 Ave neighs/atom = 33.174 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.125913925883, Press = -1.12816380495117 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -24420.199 -24420.199 -24747.981 -24747.981 317.01868 317.01868 288073.4 288073.4 -273.71308 -273.71308 12000 -24416.536 -24416.536 -24748.944 -24748.944 321.4923 321.4923 288047.71 288047.71 -175.63237 -175.63237 Loop time of 116.39 on 1 procs for 1000 steps with 8000 atoms Performance: 0.742 ns/day, 32.331 hours/ns, 8.592 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 114.54 | 114.54 | 114.54 | 0.0 | 98.41 Neigh | 0.15899 | 0.15899 | 0.15899 | 0.0 | 0.14 Comm | 0.20946 | 0.20946 | 0.20946 | 0.0 | 0.18 Output | 0.00023818 | 0.00023818 | 0.00023818 | 0.0 | 0.00 Modify | 1.3291 | 1.3291 | 1.3291 | 0.0 | 1.14 Other | | 0.1547 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6564 ave 6564 max 6564 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265946 ave 265946 max 265946 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265946 Ave neighs/atom = 33.24325 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.99199075941, Press = -0.472655922951862 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -24416.536 -24416.536 -24748.944 -24748.944 321.4923 321.4923 288047.71 288047.71 -175.63237 -175.63237 13000 -24420.377 -24420.377 -24748.027 -24748.027 316.89105 316.89105 287938.67 287938.67 -145.09672 -145.09672 Loop time of 116.422 on 1 procs for 1000 steps with 8000 atoms Performance: 0.742 ns/day, 32.340 hours/ns, 8.589 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 114.57 | 114.57 | 114.57 | 0.0 | 98.41 Neigh | 0.15763 | 0.15763 | 0.15763 | 0.0 | 0.14 Comm | 0.21097 | 0.21097 | 0.21097 | 0.0 | 0.18 Output | 0.0002597 | 0.0002597 | 0.0002597 | 0.0 | 0.00 Modify | 1.3274 | 1.3274 | 1.3274 | 0.0 | 1.14 Other | | 0.1554 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6583 ave 6583 max 6583 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265834 ave 265834 max 265834 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265834 Ave neighs/atom = 33.22925 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.937830499651, Press = -0.504937495035622 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -24420.377 -24420.377 -24748.027 -24748.027 316.89105 316.89105 287938.67 287938.67 -145.09672 -145.09672 14000 -24412.194 -24412.194 -24742.006 -24742.006 318.98272 318.98272 287971.7 287971.7 -132.79777 -132.79777 Loop time of 116.211 on 1 procs for 1000 steps with 8000 atoms Performance: 0.743 ns/day, 32.281 hours/ns, 8.605 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 114.36 | 114.36 | 114.36 | 0.0 | 98.41 Neigh | 0.15796 | 0.15796 | 0.15796 | 0.0 | 0.14 Comm | 0.20982 | 0.20982 | 0.20982 | 0.0 | 0.18 Output | 0.00024046 | 0.00024046 | 0.00024046 | 0.0 | 0.00 Modify | 1.3262 | 1.3262 | 1.3262 | 0.0 | 1.14 Other | | 0.1561 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6559 ave 6559 max 6559 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265516 ave 265516 max 265516 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265516 Ave neighs/atom = 33.1895 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.885790532719, Press = 0.095320013150999 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -24412.194 -24412.194 -24742.006 -24742.006 318.98272 318.98272 287971.7 287971.7 -132.79777 -132.79777 15000 -24426.213 -24426.213 -24744.127 -24744.127 307.47514 307.47514 288025.15 288025.15 -231.91637 -231.91637 Loop time of 116.346 on 1 procs for 1000 steps with 8000 atoms Performance: 0.743 ns/day, 32.318 hours/ns, 8.595 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 114.5 | 114.5 | 114.5 | 0.0 | 98.41 Neigh | 0.15758 | 0.15758 | 0.15758 | 0.0 | 0.14 Comm | 0.2098 | 0.2098 | 0.2098 | 0.0 | 0.18 Output | 0.00024382 | 0.00024382 | 0.00024382 | 0.0 | 0.00 Modify | 1.3265 | 1.3265 | 1.3265 | 0.0 | 1.14 Other | | 0.1552 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6581 ave 6581 max 6581 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265734 ave 265734 max 265734 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265734 Ave neighs/atom = 33.21675 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.897022685449, Press = -0.0152637208271343 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -24426.213 -24426.213 -24744.127 -24744.127 307.47514 307.47514 288025.15 288025.15 -231.91637 -231.91637 16000 -24413.081 -24413.081 -24738.482 -24738.482 314.71588 314.71588 288208.23 288208.23 -416.25948 -416.25948 Loop time of 131.869 on 1 procs for 1000 steps with 8000 atoms Performance: 0.655 ns/day, 36.630 hours/ns, 7.583 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 129.68 | 129.68 | 129.68 | 0.0 | 98.34 Neigh | 0.17193 | 0.17193 | 0.17193 | 0.0 | 0.13 Comm | 0.23128 | 0.23128 | 0.23128 | 0.0 | 0.18 Output | 0.00032041 | 0.00032041 | 0.00032041 | 0.0 | 0.00 Modify | 1.6112 | 1.6112 | 1.6112 | 0.0 | 1.22 Other | | 0.1774 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6515 ave 6515 max 6515 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265250 ave 265250 max 265250 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265250 Ave neighs/atom = 33.15625 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.870974929513, Press = 0.424291981379696 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -24413.081 -24413.081 -24738.482 -24738.482 314.71588 314.71588 288208.23 288208.23 -416.25948 -416.25948 17000 -24411.614 -24411.614 -24741.061 -24741.061 318.62857 318.62857 288125.2 288125.2 -325.23823 -325.23823 Loop time of 116.504 on 1 procs for 1000 steps with 8000 atoms Performance: 0.742 ns/day, 32.362 hours/ns, 8.583 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 114.65 | 114.65 | 114.65 | 0.0 | 98.41 Neigh | 0.1582 | 0.1582 | 0.1582 | 0.0 | 0.14 Comm | 0.20952 | 0.20952 | 0.20952 | 0.0 | 0.18 Output | 0.00024432 | 0.00024432 | 0.00024432 | 0.0 | 0.00 Modify | 1.3312 | 1.3312 | 1.3312 | 0.0 | 1.14 Other | | 0.1551 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6573 ave 6573 max 6573 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265606 ave 265606 max 265606 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265606 Ave neighs/atom = 33.20075 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.809208062297, Press = 0.970387957729105 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -24411.614 -24411.614 -24741.061 -24741.061 318.62857 318.62857 288125.2 288125.2 -325.23823 -325.23823 18000 -24411.956 -24411.956 -24736.887 -24736.887 314.26118 314.26118 287968.64 287968.64 -116.57794 -116.57794 Loop time of 118.726 on 1 procs for 1000 steps with 8000 atoms Performance: 0.728 ns/day, 32.979 hours/ns, 8.423 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 116.82 | 116.82 | 116.82 | 0.0 | 98.39 Neigh | 0.16282 | 0.16282 | 0.16282 | 0.0 | 0.14 Comm | 0.21435 | 0.21435 | 0.21435 | 0.0 | 0.18 Output | 0.00028306 | 0.00028306 | 0.00028306 | 0.0 | 0.00 Modify | 1.3711 | 1.3711 | 1.3711 | 0.0 | 1.15 Other | | 0.1577 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6570 ave 6570 max 6570 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265672 ave 265672 max 265672 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265672 Ave neighs/atom = 33.209 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.853152878852, Press = 0.583532100559766 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -24411.956 -24411.956 -24736.887 -24736.887 314.26118 314.26118 287968.64 287968.64 -116.57794 -116.57794 19000 -24415.741 -24415.741 -24737.905 -24737.905 311.58532 311.58532 287895.73 287895.73 -36.514779 -36.514779 Loop time of 123.825 on 1 procs for 1000 steps with 8000 atoms Performance: 0.698 ns/day, 34.396 hours/ns, 8.076 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 121.81 | 121.81 | 121.81 | 0.0 | 98.38 Neigh | 0.15833 | 0.15833 | 0.15833 | 0.0 | 0.13 Comm | 0.21865 | 0.21865 | 0.21865 | 0.0 | 0.18 Output | 0.00032063 | 0.00032063 | 0.00032063 | 0.0 | 0.00 Modify | 1.4672 | 1.4672 | 1.4672 | 0.0 | 1.18 Other | | 0.167 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6522 ave 6522 max 6522 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265316 ave 265316 max 265316 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265316 Ave neighs/atom = 33.1645 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.96842446368, Press = 1.17003664037734 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -24415.741 -24415.741 -24737.905 -24737.905 311.58532 311.58532 287895.73 287895.73 -36.514779 -36.514779 20000 -24423.969 -24423.969 -24745.526 -24745.526 310.99828 310.99828 287823.99 287823.99 67.50406 67.50406 Loop time of 121.352 on 1 procs for 1000 steps with 8000 atoms Performance: 0.712 ns/day, 33.709 hours/ns, 8.240 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 119.39 | 119.39 | 119.39 | 0.0 | 98.39 Neigh | 0.16244 | 0.16244 | 0.16244 | 0.0 | 0.13 Comm | 0.21749 | 0.21749 | 0.21749 | 0.0 | 0.18 Output | 0.00028264 | 0.00028264 | 0.00028264 | 0.0 | 0.00 Modify | 1.4168 | 1.4168 | 1.4168 | 0.0 | 1.17 Other | | 0.1615 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6579 ave 6579 max 6579 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265358 ave 265358 max 265358 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265358 Ave neighs/atom = 33.16975 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.056932328247, Press = 1.14951100885884 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -24423.969 -24423.969 -24745.526 -24745.526 310.99828 310.99828 287823.99 287823.99 67.50406 67.50406 21000 -24409.884 -24409.884 -24742.534 -24742.534 321.72636 321.72636 287858.03 287858.03 101.70552 101.70552 Loop time of 132.196 on 1 procs for 1000 steps with 8000 atoms Performance: 0.654 ns/day, 36.721 hours/ns, 7.565 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 130 | 130 | 130 | 0.0 | 98.34 Neigh | 0.1733 | 0.1733 | 0.1733 | 0.0 | 0.13 Comm | 0.23323 | 0.23323 | 0.23323 | 0.0 | 0.18 Output | 0.00024665 | 0.00024665 | 0.00024665 | 0.0 | 0.00 Modify | 1.6065 | 1.6065 | 1.6065 | 0.0 | 1.22 Other | | 0.178 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6557 ave 6557 max 6557 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265124 ave 265124 max 265124 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265124 Ave neighs/atom = 33.1405 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.059956567961, Press = 0.872042252532266 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -24409.884 -24409.884 -24742.534 -24742.534 321.72636 321.72636 287858.03 287858.03 101.70552 101.70552 22000 -24423.39 -24423.39 -24747.148 -24747.148 313.12614 313.12614 287868.27 287868.27 38.540962 38.540962 Loop time of 127.46 on 1 procs for 1000 steps with 8000 atoms Performance: 0.678 ns/day, 35.406 hours/ns, 7.846 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 125.37 | 125.37 | 125.37 | 0.0 | 98.36 Neigh | 0.1632 | 0.1632 | 0.1632 | 0.0 | 0.13 Comm | 0.22169 | 0.22169 | 0.22169 | 0.0 | 0.17 Output | 0.00023959 | 0.00023959 | 0.00023959 | 0.0 | 0.00 Modify | 1.5299 | 1.5299 | 1.5299 | 0.0 | 1.20 Other | | 0.1727 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6585 ave 6585 max 6585 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265768 ave 265768 max 265768 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265768 Ave neighs/atom = 33.221 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 287883.835333126 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0