# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 6.581419467926026*${_u_distance} variable latticeconst_converted equal 6.581419467926026*1 lattice diamond ${latticeconst_converted} lattice diamond 6.58141946792603 Lattice spacing in x,y,z = 6.5814195 6.5814195 6.5814195 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (65.814195 65.814195 65.814195) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms using lattice units in orthogonal box = (0 0 0) to (65.814195 65.814195 65.814195) create_atoms CPU = 0.009 seconds variable mass_converted equal 118.71*${_u_mass} variable mass_converted equal 118.71*1 kim_interactions Sn WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Sn #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_KimKoLee_2020_NaSn__MO_329881861557_002 pair_coeff * * Sn #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 118.71 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 285074.72533011 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 285074.72533011/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 285074.72533011/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 285074.72533011/(1*1*${_u_distance}) variable V0_metal equal 285074.72533011/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 285074.72533011*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 285074.72533011 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 333.15*${_u_temperature} variable temp_converted equal 333.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 333.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "333.15 - 0.2" variable T_up equal "333.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_329881861557_002#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.314 | 4.314 | 4.314 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -24733.044 -24733.044 -25077.505 -25077.505 333.15 333.15 285074.73 285074.73 1290.6205 1290.6205 1000 -24360.066 -24360.066 -24723.481 -24723.481 351.48201 351.48201 288233.97 288233.97 -641.81673 -641.81673 Loop time of 119.958 on 1 procs for 1000 steps with 8000 atoms Performance: 0.720 ns/day, 33.322 hours/ns, 8.336 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 118.25 | 118.25 | 118.25 | 0.0 | 98.57 Neigh | 0.052644 | 0.052644 | 0.052644 | 0.0 | 0.04 Comm | 0.20546 | 0.20546 | 0.20546 | 0.0 | 0.17 Output | 0.00028243 | 0.00028243 | 0.00028243 | 0.0 | 0.00 Modify | 1.2943 | 1.2943 | 1.2943 | 0.0 | 1.08 Other | | 0.1593 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6554 ave 6554 max 6554 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265714 ave 265714 max 265714 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265714 Ave neighs/atom = 33.21425 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -24360.066 -24360.066 -24723.481 -24723.481 351.48201 351.48201 288233.97 288233.97 -641.81673 -641.81673 2000 -24373.987 -24373.987 -24706.36 -24706.36 321.4598 321.4598 288003.99 288003.99 156.78628 156.78628 Loop time of 115.122 on 1 procs for 1000 steps with 8000 atoms Performance: 0.751 ns/day, 31.978 hours/ns, 8.686 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 113.32 | 113.32 | 113.32 | 0.0 | 98.44 Neigh | 0.15839 | 0.15839 | 0.15839 | 0.0 | 0.14 Comm | 0.20482 | 0.20482 | 0.20482 | 0.0 | 0.18 Output | 0.00027636 | 0.00027636 | 0.00027636 | 0.0 | 0.00 Modify | 1.2769 | 1.2769 | 1.2769 | 0.0 | 1.11 Other | | 0.1573 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6542 ave 6542 max 6542 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265174 ave 265174 max 265174 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265174 Ave neighs/atom = 33.14675 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -24373.987 -24373.987 -24706.36 -24706.36 321.4598 321.4598 288003.99 288003.99 156.78628 156.78628 3000 -24364.718 -24364.718 -24716.125 -24716.125 339.86841 339.86841 288115.45 288115.45 -280.20439 -280.20439 Loop time of 115.438 on 1 procs for 1000 steps with 8000 atoms Performance: 0.748 ns/day, 32.066 hours/ns, 8.663 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 113.64 | 113.64 | 113.64 | 0.0 | 98.44 Neigh | 0.15842 | 0.15842 | 0.15842 | 0.0 | 0.14 Comm | 0.20769 | 0.20769 | 0.20769 | 0.0 | 0.18 Output | 0.00031581 | 0.00031581 | 0.00031581 | 0.0 | 0.00 Modify | 1.2767 | 1.2767 | 1.2767 | 0.0 | 1.11 Other | | 0.1569 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6578 ave 6578 max 6578 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265392 ave 265392 max 265392 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265392 Ave neighs/atom = 33.174 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -24364.718 -24364.718 -24716.125 -24716.125 339.86841 339.86841 288115.45 288115.45 -280.20439 -280.20439 4000 -24353.056 -24353.056 -24718.432 -24718.432 353.37771 353.37771 288455.87 288455.87 -110.97944 -110.97944 Loop time of 115.4 on 1 procs for 1000 steps with 8000 atoms Performance: 0.749 ns/day, 32.056 hours/ns, 8.665 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 113.6 | 113.6 | 113.6 | 0.0 | 98.44 Neigh | 0.15855 | 0.15855 | 0.15855 | 0.0 | 0.14 Comm | 0.20514 | 0.20514 | 0.20514 | 0.0 | 0.18 Output | 0.0002759 | 0.0002759 | 0.0002759 | 0.0 | 0.00 Modify | 1.2779 | 1.2779 | 1.2779 | 0.0 | 1.11 Other | | 0.1573 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6535 ave 6535 max 6535 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265106 ave 265106 max 265106 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265106 Ave neighs/atom = 33.13825 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -24353.056 -24353.056 -24718.432 -24718.432 353.37771 353.37771 288455.87 288455.87 -110.97944 -110.97944 5000 -24384.485 -24384.485 -24718.684 -24718.684 323.22429 323.22429 288008.72 288008.72 59.039449 59.039449 Loop time of 115.515 on 1 procs for 1000 steps with 8000 atoms Performance: 0.748 ns/day, 32.088 hours/ns, 8.657 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 113.71 | 113.71 | 113.71 | 0.0 | 98.44 Neigh | 0.15848 | 0.15848 | 0.15848 | 0.0 | 0.14 Comm | 0.20706 | 0.20706 | 0.20706 | 0.0 | 0.18 Output | 0.00028581 | 0.00028581 | 0.00028581 | 0.0 | 0.00 Modify | 1.2803 | 1.2803 | 1.2803 | 0.0 | 1.11 Other | | 0.1572 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6561 ave 6561 max 6561 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265148 ave 265148 max 265148 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265148 Ave neighs/atom = 33.1435 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 328.550280318066, Press = 113.573568962897 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -24384.485 -24384.485 -24718.684 -24718.684 323.22429 323.22429 288008.72 288008.72 59.039449 59.039449 6000 -24374.742 -24374.742 -24712.223 -24712.223 326.39917 326.39917 287795.23 287795.23 205.26502 205.26502 Loop time of 115.573 on 1 procs for 1000 steps with 8000 atoms Performance: 0.748 ns/day, 32.104 hours/ns, 8.653 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 113.74 | 113.74 | 113.74 | 0.0 | 98.41 Neigh | 0.15883 | 0.15883 | 0.15883 | 0.0 | 0.14 Comm | 0.20583 | 0.20583 | 0.20583 | 0.0 | 0.18 Output | 0.00023806 | 0.00023806 | 0.00023806 | 0.0 | 0.00 Modify | 1.3151 | 1.3151 | 1.3151 | 0.0 | 1.14 Other | | 0.1578 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6570 ave 6570 max 6570 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265858 ave 265858 max 265858 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265858 Ave neighs/atom = 33.23225 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 331.754061688401, Press = 11.0122724328738 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -24374.742 -24374.742 -24712.223 -24712.223 326.39917 326.39917 287795.23 287795.23 205.26502 205.26502 7000 -24379.667 -24379.667 -24719.908 -24719.908 329.06782 329.06782 288008.95 288008.95 87.71145 87.71145 Loop time of 129.976 on 1 procs for 1000 steps with 8000 atoms Performance: 0.665 ns/day, 36.104 hours/ns, 7.694 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.82 | 127.82 | 127.82 | 0.0 | 98.34 Neigh | 0.17507 | 0.17507 | 0.17507 | 0.0 | 0.13 Comm | 0.22572 | 0.22572 | 0.22572 | 0.0 | 0.17 Output | 0.00032537 | 0.00032537 | 0.00032537 | 0.0 | 0.00 Modify | 1.5814 | 1.5814 | 1.5814 | 0.0 | 1.22 Other | | 0.1774 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6535 ave 6535 max 6535 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265254 ave 265254 max 265254 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265254 Ave neighs/atom = 33.15675 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.880755873296, Press = -4.08968659766097 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -24379.667 -24379.667 -24719.908 -24719.908 329.06782 329.06782 288008.95 288008.95 87.71145 87.71145 8000 -24375.88 -24375.88 -24725.045 -24725.045 337.70028 337.70028 288408.79 288408.79 -390.10221 -390.10221 Loop time of 133.691 on 1 procs for 1000 steps with 8000 atoms Performance: 0.646 ns/day, 37.136 hours/ns, 7.480 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 131.45 | 131.45 | 131.45 | 0.0 | 98.33 Neigh | 0.17284 | 0.17284 | 0.17284 | 0.0 | 0.13 Comm | 0.23369 | 0.23369 | 0.23369 | 0.0 | 0.17 Output | 0.00024299 | 0.00024299 | 0.00024299 | 0.0 | 0.00 Modify | 1.6484 | 1.6484 | 1.6484 | 0.0 | 1.23 Other | | 0.1828 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6602 ave 6602 max 6602 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265664 ave 265664 max 265664 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265664 Ave neighs/atom = 33.208 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.033435169117, Press = -0.370795205513175 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -24375.88 -24375.88 -24725.045 -24725.045 337.70028 337.70028 288408.79 288408.79 -390.10221 -390.10221 9000 -24375.108 -24375.108 -24715.421 -24715.421 329.138 329.138 288276.42 288276.42 -326.12956 -326.12956 Loop time of 133.692 on 1 procs for 1000 steps with 8000 atoms Performance: 0.646 ns/day, 37.137 hours/ns, 7.480 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 131.46 | 131.46 | 131.46 | 0.0 | 98.33 Neigh | 0.17405 | 0.17405 | 0.17405 | 0.0 | 0.13 Comm | 0.2328 | 0.2328 | 0.2328 | 0.0 | 0.17 Output | 0.00038838 | 0.00038838 | 0.00038838 | 0.0 | 0.00 Modify | 1.6448 | 1.6448 | 1.6448 | 0.0 | 1.23 Other | | 0.1827 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6537 ave 6537 max 6537 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265212 ave 265212 max 265212 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265212 Ave neighs/atom = 33.1515 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.857723656643, Press = 2.84262070700118 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -24375.108 -24375.108 -24715.421 -24715.421 329.138 329.138 288276.42 288276.42 -326.12956 -326.12956 10000 -24375.635 -24375.635 -24716.985 -24716.985 330.14108 330.14108 288116.45 288116.45 -48.596156 -48.596156 Loop time of 133.497 on 1 procs for 1000 steps with 8000 atoms Performance: 0.647 ns/day, 37.082 hours/ns, 7.491 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 131.26 | 131.26 | 131.26 | 0.0 | 98.32 Neigh | 0.1732 | 0.1732 | 0.1732 | 0.0 | 0.13 Comm | 0.23203 | 0.23203 | 0.23203 | 0.0 | 0.17 Output | 0.00024197 | 0.00024197 | 0.00024197 | 0.0 | 0.00 Modify | 1.6518 | 1.6518 | 1.6518 | 0.0 | 1.24 Other | | 0.1819 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6551 ave 6551 max 6551 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265198 ave 265198 max 265198 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265198 Ave neighs/atom = 33.14975 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.144864284804, Press = 3.2157536006391 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -24375.635 -24375.635 -24716.985 -24716.985 330.14108 330.14108 288116.45 288116.45 -48.596156 -48.596156 11000 -24374.865 -24374.865 -24723.78 -24723.78 337.45794 337.45794 287834.38 287834.38 295.4903 295.4903 Loop time of 133.796 on 1 procs for 1000 steps with 8000 atoms Performance: 0.646 ns/day, 37.166 hours/ns, 7.474 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 131.56 | 131.56 | 131.56 | 0.0 | 98.33 Neigh | 0.17304 | 0.17304 | 0.17304 | 0.0 | 0.13 Comm | 0.23322 | 0.23322 | 0.23322 | 0.0 | 0.17 Output | 0.00036224 | 0.00036224 | 0.00036224 | 0.0 | 0.00 Modify | 1.6477 | 1.6477 | 1.6477 | 0.0 | 1.23 Other | | 0.1831 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6546 ave 6546 max 6546 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265316 ave 265316 max 265316 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265316 Ave neighs/atom = 33.1645 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.108286285206, Press = 2.06861060269361 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -24374.865 -24374.865 -24723.78 -24723.78 337.45794 337.45794 287834.38 287834.38 295.4903 295.4903 12000 -24369.959 -24369.959 -24720.208 -24720.208 338.7473 338.7473 288169.35 288169.35 42.030838 42.030838 Loop time of 133.745 on 1 procs for 1000 steps with 8000 atoms Performance: 0.646 ns/day, 37.152 hours/ns, 7.477 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 131.53 | 131.53 | 131.53 | 0.0 | 98.34 Neigh | 0.17126 | 0.17126 | 0.17126 | 0.0 | 0.13 Comm | 0.22952 | 0.22952 | 0.22952 | 0.0 | 0.17 Output | 0.00028479 | 0.00028479 | 0.00028479 | 0.0 | 0.00 Modify | 1.6384 | 1.6384 | 1.6384 | 0.0 | 1.22 Other | | 0.1803 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6513 ave 6513 max 6513 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265528 ave 265528 max 265528 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265528 Ave neighs/atom = 33.191 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.940746106287, Press = 0.123410870983826 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -24369.959 -24369.959 -24720.208 -24720.208 338.7473 338.7473 288169.35 288169.35 42.030838 42.030838 13000 -24376.814 -24376.814 -24722.107 -24722.107 333.95503 333.95503 288195.85 288195.85 -148.15663 -148.15663 Loop time of 133.738 on 1 procs for 1000 steps with 8000 atoms Performance: 0.646 ns/day, 37.150 hours/ns, 7.477 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 131.51 | 131.51 | 131.51 | 0.0 | 98.33 Neigh | 0.17104 | 0.17104 | 0.17104 | 0.0 | 0.13 Comm | 0.22976 | 0.22976 | 0.22976 | 0.0 | 0.17 Output | 0.00024241 | 0.00024241 | 0.00024241 | 0.0 | 0.00 Modify | 1.6502 | 1.6502 | 1.6502 | 0.0 | 1.23 Other | | 0.1797 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6583 ave 6583 max 6583 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265630 ave 265630 max 265630 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265630 Ave neighs/atom = 33.20375 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.908360069432, Press = 0.331421893451144 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -24376.814 -24376.814 -24722.107 -24722.107 333.95503 333.95503 288195.85 288195.85 -148.15663 -148.15663 14000 -24368.598 -24368.598 -24715.112 -24715.112 335.13549 335.13549 288158.24 288158.24 -46.878732 -46.878732 Loop time of 133.277 on 1 procs for 1000 steps with 8000 atoms Performance: 0.648 ns/day, 37.021 hours/ns, 7.503 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 131 | 131 | 131 | 0.0 | 98.29 Neigh | 0.22904 | 0.22904 | 0.22904 | 0.0 | 0.17 Comm | 0.22853 | 0.22853 | 0.22853 | 0.0 | 0.17 Output | 0.00027537 | 0.00027537 | 0.00027537 | 0.0 | 0.00 Modify | 1.6355 | 1.6355 | 1.6355 | 0.0 | 1.23 Other | | 0.1801 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6534 ave 6534 max 6534 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265240 ave 265240 max 265240 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265240 Ave neighs/atom = 33.155 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.869736597474, Press = 1.32390882350328 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -24368.598 -24368.598 -24715.112 -24715.112 335.13549 335.13549 288158.24 288158.24 -46.878732 -46.878732 15000 -24381.192 -24381.192 -24722.994 -24722.994 330.57901 330.57901 287956.78 287956.78 86.897053 86.897053 Loop time of 133.28 on 1 procs for 1000 steps with 8000 atoms Performance: 0.648 ns/day, 37.022 hours/ns, 7.503 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 131.06 | 131.06 | 131.06 | 0.0 | 98.33 Neigh | 0.17096 | 0.17096 | 0.17096 | 0.0 | 0.13 Comm | 0.22747 | 0.22747 | 0.22747 | 0.0 | 0.17 Output | 0.00035554 | 0.00035554 | 0.00035554 | 0.0 | 0.00 Modify | 1.6424 | 1.6424 | 1.6424 | 0.0 | 1.23 Other | | 0.1793 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6564 ave 6564 max 6564 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265252 ave 265252 max 265252 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265252 Ave neighs/atom = 33.1565 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.949558275906, Press = 1.85403220770643 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -24381.192 -24381.192 -24722.994 -24722.994 330.57901 330.57901 287956.78 287956.78 86.897053 86.897053 16000 -24373.198 -24373.198 -24714.625 -24714.625 330.21508 330.21508 287681.99 287681.99 470.39172 470.39172 Loop time of 133.43 on 1 procs for 1000 steps with 8000 atoms Performance: 0.648 ns/day, 37.064 hours/ns, 7.495 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 131.21 | 131.21 | 131.21 | 0.0 | 98.34 Neigh | 0.17123 | 0.17123 | 0.17123 | 0.0 | 0.13 Comm | 0.22882 | 0.22882 | 0.22882 | 0.0 | 0.17 Output | 0.0002873 | 0.0002873 | 0.0002873 | 0.0 | 0.00 Modify | 1.6375 | 1.6375 | 1.6375 | 0.0 | 1.23 Other | | 0.1803 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6519 ave 6519 max 6519 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265426 ave 265426 max 265426 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265426 Ave neighs/atom = 33.17825 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.860649924095, Press = 1.37059992224199 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -24373.198 -24373.198 -24714.625 -24714.625 330.21508 330.21508 287681.99 287681.99 470.39172 470.39172 17000 -24368.705 -24368.705 -24714.587 -24714.587 334.52424 334.52424 287873.54 287873.54 246.79818 246.79818 Loop time of 133.138 on 1 procs for 1000 steps with 8000 atoms Performance: 0.649 ns/day, 36.983 hours/ns, 7.511 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 130.93 | 130.93 | 130.93 | 0.0 | 98.34 Neigh | 0.17138 | 0.17138 | 0.17138 | 0.0 | 0.13 Comm | 0.22608 | 0.22608 | 0.22608 | 0.0 | 0.17 Output | 0.00023946 | 0.00023946 | 0.00023946 | 0.0 | 0.00 Modify | 1.6344 | 1.6344 | 1.6344 | 0.0 | 1.23 Other | | 0.1791 | | | 0.13 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6534 ave 6534 max 6534 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265342 ave 265342 max 265342 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265342 Ave neighs/atom = 33.16775 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.757042200906, Press = -0.477377804715209 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -24368.705 -24368.705 -24714.587 -24714.587 334.52424 334.52424 287873.54 287873.54 246.79818 246.79818 18000 -24369.977 -24369.977 -24713.444 -24713.444 332.18906 332.18906 288326.5 288326.5 -331.53493 -331.53493 Loop time of 132.619 on 1 procs for 1000 steps with 8000 atoms Performance: 0.651 ns/day, 36.839 hours/ns, 7.540 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 130.4 | 130.4 | 130.4 | 0.0 | 98.33 Neigh | 0.17191 | 0.17191 | 0.17191 | 0.0 | 0.13 Comm | 0.22797 | 0.22797 | 0.22797 | 0.0 | 0.17 Output | 0.00036885 | 0.00036885 | 0.00036885 | 0.0 | 0.00 Modify | 1.6316 | 1.6316 | 1.6316 | 0.0 | 1.23 Other | | 0.1821 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6542 ave 6542 max 6542 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265170 ave 265170 max 265170 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265170 Ave neighs/atom = 33.14625 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.787349484313, Press = 0.207638124452978 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -24369.977 -24369.977 -24713.444 -24713.444 332.18906 332.18906 288326.5 288326.5 -331.53493 -331.53493 19000 -24376.12 -24376.12 -24716.6 -24716.6 329.29985 329.29985 288085.84 288085.84 -21.930305 -21.930305 Loop time of 132.497 on 1 procs for 1000 steps with 8000 atoms Performance: 0.652 ns/day, 36.805 hours/ns, 7.547 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 130.28 | 130.28 | 130.28 | 0.0 | 98.33 Neigh | 0.17088 | 0.17088 | 0.17088 | 0.0 | 0.13 Comm | 0.22826 | 0.22826 | 0.22826 | 0.0 | 0.17 Output | 0.00032179 | 0.00032179 | 0.00032179 | 0.0 | 0.00 Modify | 1.6383 | 1.6383 | 1.6383 | 0.0 | 1.24 Other | | 0.1814 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6531 ave 6531 max 6531 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 264848 ave 264848 max 264848 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 264848 Ave neighs/atom = 33.106 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.93947106874, Press = 0.726274647378241 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.314 | 4.314 | 4.314 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -24376.12 -24376.12 -24716.6 -24716.6 329.29985 329.29985 288085.84 288085.84 -21.930305 -21.930305 20000 -24380.293 -24380.293 -24726.755 -24726.755 335.08481 335.08481 287977.34 287977.34 98.432905 98.432905 Loop time of 133.758 on 1 procs for 1000 steps with 8000 atoms Performance: 0.646 ns/day, 37.155 hours/ns, 7.476 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 131.52 | 131.52 | 131.52 | 0.0 | 98.33 Neigh | 0.17261 | 0.17261 | 0.17261 | 0.0 | 0.13 Comm | 0.22914 | 0.22914 | 0.22914 | 0.0 | 0.17 Output | 0.0003164 | 0.0003164 | 0.0003164 | 0.0 | 0.00 Modify | 1.6502 | 1.6502 | 1.6502 | 0.0 | 1.23 Other | | 0.1816 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6566 ave 6566 max 6566 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265276 ave 265276 max 265276 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265276 Ave neighs/atom = 33.1595 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.019117634977, Press = 0.774716790255835 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 20 20 20 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -24380.293 -24380.293 -24726.755 -24726.755 335.08481 335.08481 287977.34 287977.34 98.432905 98.432905 21000 -24367.129 -24367.129 -24714.237 -24714.237 335.71046 335.71046 287918.64 287918.64 258.49751 258.49751 Loop time of 122.294 on 1 procs for 1000 steps with 8000 atoms Performance: 0.706 ns/day, 33.971 hours/ns, 8.177 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 120.31 | 120.31 | 120.31 | 0.0 | 98.38 Neigh | 0.16354 | 0.16354 | 0.16354 | 0.0 | 0.13 Comm | 0.21433 | 0.21433 | 0.21433 | 0.0 | 0.18 Output | 0.000241 | 0.000241 | 0.000241 | 0.0 | 0.00 Modify | 1.4417 | 1.4417 | 1.4417 | 0.0 | 1.18 Other | | 0.1669 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6538 ave 6538 max 6538 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 265034 ave 265034 max 265034 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 265034 Ave neighs/atom = 33.12925 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T333.15.out" else "print 'not_converged' file output/vol_T333.15.out" print '${V}' file output/vol_T333.15.out 288070.588572546 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0