# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 6.303511045873165*${_u_distance} variable latticeconst_converted equal 6.303511045873165*1 lattice diamond ${latticeconst_converted} lattice diamond 6.30351104587317 Lattice spacing in x,y,z = 6.30351 6.30351 6.30351 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (63.0351 63.0351 63.0351) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms create_atoms CPU = 0.00146103 secs variable mass_converted equal 118.71*${_u_mass} variable mass_converted equal 118.71*1 kim_interactions Sn #=== BEGIN kim_interactions ================================== pair_style meam/c pair_coeff * * /tmp/kim-simulator-model-parameter-file-directory-XXXXXXxqtHLM/library_VellaChen_Sn-2.meam Sn /tmp/kim-simulator-model-parameter-file-directory-XXXXXXxqtHLM/Sn_VellaChen-2.meam Sn #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 118.71 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 250465.293264076 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 250465.293264076/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 250465.293264076/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 250465.293264076/(1*1*${_u_distance}) variable V0_metal equal 250465.293264076/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 250465.293264076*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 250465.293264076 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 293.15*${_u_temperature} variable temp_converted equal 293.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 293.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "293.15 - 0.2" variable T_up equal "293.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 19 19 19 2 neighbor lists, perpetual/occasional/extra = 2 0 0 (1) pair meam/c, perpetual attributes: full, newton on pair build: full/bin/atomonly stencil: full/bin/3d bin: standard (2) pair meam/c, perpetual, half/full from (1) attributes: half, newton on pair build: halffull/newton stencil: none bin: none Per MPI rank memory allocation (min/avg/max) = 14.29 | 14.29 | 14.29 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -25453.359 -25453.359 -25756.462 -25756.462 293.15 293.15 250465.29 250465.29 1292.597 1292.597 1000 -25118.809 -25118.809 -25449.653 -25449.653 319.97964 319.97964 253253.1 253253.1 236.19392 236.19392 Loop time of 17.733 on 1 procs for 1000 steps with 8000 atoms Performance: 4.872 ns/day, 4.926 hours/ns, 56.392 timesteps/s 99.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.352 | 17.352 | 17.352 | 0.0 | 97.85 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.048692 | 0.048692 | 0.048692 | 0.0 | 0.27 Output | 5.9843e-05 | 5.9843e-05 | 5.9843e-05 | 0.0 | 0.00 Modify | 0.29945 | 0.29945 | 0.29945 | 0.0 | 1.69 Other | | 0.03236 | | | 0.18 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 136000 ave 136000 max 136000 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 272000 ave 272000 max 272000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 272000 Ave neighs/atom = 34 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 14.49 | 14.49 | 14.49 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -25118.809 -25118.809 -25449.653 -25449.653 319.97964 319.97964 253253.1 253253.1 236.19392 236.19392 2000 -25152.919 -25152.919 -25446.171 -25446.171 283.62198 283.62198 253285.86 253285.86 57.047819 57.047819 Loop time of 18.4537 on 1 procs for 1000 steps with 8000 atoms Performance: 4.682 ns/day, 5.126 hours/ns, 54.190 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 18.096 | 18.096 | 18.096 | 0.0 | 98.06 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.04619 | 0.04619 | 0.04619 | 0.0 | 0.25 Output | 4.7922e-05 | 4.7922e-05 | 4.7922e-05 | 0.0 | 0.00 Modify | 0.28035 | 0.28035 | 0.28035 | 0.0 | 1.52 Other | | 0.03088 | | | 0.17 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 144383 ave 144383 max 144383 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288766 ave 288766 max 288766 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288766 Ave neighs/atom = 36.0958 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 14.49 | 14.49 | 14.49 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -25152.919 -25152.919 -25446.171 -25446.171 283.62198 283.62198 253285.86 253285.86 57.047819 57.047819 3000 -25138.644 -25138.644 -25442.38 -25442.38 293.76261 293.76261 253465.29 253465.29 -21.969966 -21.969966 Loop time of 17.0571 on 1 procs for 1000 steps with 8000 atoms Performance: 5.065 ns/day, 4.738 hours/ns, 58.627 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 16.715 | 16.715 | 16.715 | 0.0 | 97.99 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.043033 | 0.043033 | 0.043033 | 0.0 | 0.25 Output | 5.1022e-05 | 5.1022e-05 | 5.1022e-05 | 0.0 | 0.00 Modify | 0.27033 | 0.27033 | 0.27033 | 0.0 | 1.58 Other | | 0.02905 | | | 0.17 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 144382 ave 144382 max 144382 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288764 ave 288764 max 288764 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288764 Ave neighs/atom = 36.0955 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 14.49 | 14.49 | 14.49 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -25138.644 -25138.644 -25442.38 -25442.38 293.76261 293.76261 253465.29 253465.29 -21.969966 -21.969966 4000 -25145.451 -25145.451 -25443.423 -25443.423 288.18776 288.18776 253365.65 253365.65 101.14026 101.14026 Loop time of 17.4539 on 1 procs for 1000 steps with 8000 atoms Performance: 4.950 ns/day, 4.848 hours/ns, 57.294 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.109 | 17.109 | 17.109 | 0.0 | 98.03 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.043347 | 0.043347 | 0.043347 | 0.0 | 0.25 Output | 5.9128e-05 | 5.9128e-05 | 5.9128e-05 | 0.0 | 0.00 Modify | 0.27162 | 0.27162 | 0.27162 | 0.0 | 1.56 Other | | 0.02954 | | | 0.17 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 144122 ave 144122 max 144122 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288244 ave 288244 max 288244 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288244 Ave neighs/atom = 36.0305 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 14.49 | 14.49 | 14.49 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -25145.451 -25145.451 -25443.423 -25443.423 288.18776 288.18776 253365.65 253365.65 101.14026 101.14026 5000 -25143.306 -25143.306 -25441.763 -25441.763 288.65738 288.65738 253400.53 253400.53 19.232967 19.232967 Loop time of 17.4588 on 1 procs for 1000 steps with 8000 atoms Performance: 4.949 ns/day, 4.850 hours/ns, 57.278 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.114 | 17.114 | 17.114 | 0.0 | 98.03 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.042926 | 0.042926 | 0.042926 | 0.0 | 0.25 Output | 3.6955e-05 | 3.6955e-05 | 3.6955e-05 | 0.0 | 0.00 Modify | 0.27237 | 0.27237 | 0.27237 | 0.0 | 1.56 Other | | 0.02901 | | | 0.17 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 144152 ave 144152 max 144152 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288304 ave 288304 max 288304 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288304 Ave neighs/atom = 36.038 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 296.521592247059, Press = 109.225108473984 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 14.49 | 14.49 | 14.49 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -25143.306 -25143.306 -25441.763 -25441.763 288.65738 288.65738 253400.53 253400.53 19.232967 19.232967 6000 -25143.514 -25143.514 -25445.424 -25445.424 291.99564 291.99564 253339.76 253339.76 120.56774 120.56774 Loop time of 18.251 on 1 procs for 1000 steps with 8000 atoms Performance: 4.734 ns/day, 5.070 hours/ns, 54.792 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.891 | 17.891 | 17.891 | 0.0 | 98.03 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.044321 | 0.044321 | 0.044321 | 0.0 | 0.24 Output | 3.7193e-05 | 3.7193e-05 | 3.7193e-05 | 0.0 | 0.00 Modify | 0.28496 | 0.28496 | 0.28496 | 0.0 | 1.56 Other | | 0.03029 | | | 0.17 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 144218 ave 144218 max 144218 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288436 ave 288436 max 288436 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288436 Ave neighs/atom = 36.0545 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.164155485272, Press = 16.3915579135926 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 14.49 | 14.49 | 14.49 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -25143.514 -25143.514 -25445.424 -25445.424 291.99564 291.99564 253339.76 253339.76 120.56774 120.56774 7000 -25140.045 -25140.045 -25443.249 -25443.249 293.2475 293.2475 253500.96 253500.96 -119.22978 -119.22978 Loop time of 16.9549 on 1 procs for 1000 steps with 8000 atoms Performance: 5.096 ns/day, 4.710 hours/ns, 58.980 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 16.611 | 16.611 | 16.611 | 0.0 | 97.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.041063 | 0.041063 | 0.041063 | 0.0 | 0.24 Output | 3.9101e-05 | 3.9101e-05 | 3.9101e-05 | 0.0 | 0.00 Modify | 0.27501 | 0.27501 | 0.27501 | 0.0 | 1.62 Other | | 0.02781 | | | 0.16 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 144119 ave 144119 max 144119 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288238 ave 288238 max 288238 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288238 Ave neighs/atom = 36.0297 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.047282394272, Press = 14.2221684035662 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 14.49 | 14.49 | 14.49 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -25140.045 -25140.045 -25443.249 -25443.249 293.2475 293.2475 253500.96 253500.96 -119.22978 -119.22978 8000 -25144.561 -25144.561 -25447.733 -25447.733 293.21722 293.21722 253459.22 253459.22 -112.53086 -112.53086 Loop time of 16.4098 on 1 procs for 1000 steps with 8000 atoms Performance: 5.265 ns/day, 4.558 hours/ns, 60.939 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 16.072 | 16.072 | 16.072 | 0.0 | 97.94 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.040233 | 0.040233 | 0.040233 | 0.0 | 0.25 Output | 3.6955e-05 | 3.6955e-05 | 3.6955e-05 | 0.0 | 0.00 Modify | 0.2705 | 0.2705 | 0.2705 | 0.0 | 1.65 Other | | 0.02704 | | | 0.16 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 144126 ave 144126 max 144126 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288252 ave 288252 max 288252 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288252 Ave neighs/atom = 36.0315 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.168117873357, Press = 7.27340731090306 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 14.49 | 14.49 | 14.49 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -25144.561 -25144.561 -25447.733 -25447.733 293.21722 293.21722 253459.22 253459.22 -112.53086 -112.53086 9000 -25142.382 -25142.382 -25444.661 -25444.661 292.35302 292.35302 253352.04 253352.04 71.038527 71.038527 Loop time of 15.8599 on 1 procs for 1000 steps with 8000 atoms Performance: 5.448 ns/day, 4.406 hours/ns, 63.052 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 15.531 | 15.531 | 15.531 | 0.0 | 97.93 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037772 | 0.037772 | 0.037772 | 0.0 | 0.24 Output | 3.6955e-05 | 3.6955e-05 | 3.6955e-05 | 0.0 | 0.00 Modify | 0.2648 | 0.2648 | 0.2648 | 0.0 | 1.67 Other | | 0.02587 | | | 0.16 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 144073 ave 144073 max 144073 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288146 ave 288146 max 288146 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288146 Ave neighs/atom = 36.0183 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.313093262348, Press = 3.56025978391909 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 14.49 | 14.49 | 14.49 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -25142.382 -25142.382 -25444.661 -25444.661 292.35302 292.35302 253352.04 253352.04 71.038527 71.038527 10000 -25138.821 -25138.821 -25447.7 -25447.7 298.73628 298.73628 253334.75 253334.75 147.38436 147.38436 Loop time of 15.8316 on 1 procs for 1000 steps with 8000 atoms Performance: 5.457 ns/day, 4.398 hours/ns, 63.165 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 15.504 | 15.504 | 15.504 | 0.0 | 97.93 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037435 | 0.037435 | 0.037435 | 0.0 | 0.24 Output | 3.6955e-05 | 3.6955e-05 | 3.6955e-05 | 0.0 | 0.00 Modify | 0.26473 | 0.26473 | 0.26473 | 0.0 | 1.67 Other | | 0.02574 | | | 0.16 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 144249 ave 144249 max 144249 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288498 ave 288498 max 288498 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288498 Ave neighs/atom = 36.0622 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.205053871362, Press = 1.95337216761003 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 14.49 | 14.49 | 14.49 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -25138.821 -25138.821 -25447.7 -25447.7 298.73628 298.73628 253334.75 253334.75 147.38436 147.38436 11000 -25142.842 -25142.842 -25443.193 -25443.193 290.48843 290.48843 253227.33 253227.33 308.33886 308.33886 Loop time of 16.0975 on 1 procs for 1000 steps with 8000 atoms Performance: 5.367 ns/day, 4.472 hours/ns, 62.122 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 15.767 | 15.767 | 15.767 | 0.0 | 97.95 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.038161 | 0.038161 | 0.038161 | 0.0 | 0.24 Output | 3.7909e-05 | 3.7909e-05 | 3.7909e-05 | 0.0 | 0.00 Modify | 0.26587 | 0.26587 | 0.26587 | 0.0 | 1.65 Other | | 0.02612 | | | 0.16 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 143972 ave 143972 max 143972 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 287944 ave 287944 max 287944 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 287944 Ave neighs/atom = 35.993 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.145820977712, Press = 2.05247972223884 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 14.49 | 14.49 | 14.49 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -25142.842 -25142.842 -25443.193 -25443.193 290.48843 290.48843 253227.33 253227.33 308.33886 308.33886 12000 -25145.994 -25145.994 -25449.359 -25449.359 293.40383 293.40383 253197.66 253197.66 290.23591 290.23591 Loop time of 15.944 on 1 procs for 1000 steps with 8000 atoms Performance: 5.419 ns/day, 4.429 hours/ns, 62.719 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 15.618 | 15.618 | 15.618 | 0.0 | 97.96 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037395 | 0.037395 | 0.037395 | 0.0 | 0.23 Output | 3.7909e-05 | 3.7909e-05 | 3.7909e-05 | 0.0 | 0.00 Modify | 0.26294 | 0.26294 | 0.26294 | 0.0 | 1.65 Other | | 0.02566 | | | 0.16 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 144304 ave 144304 max 144304 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288608 ave 288608 max 288608 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288608 Ave neighs/atom = 36.076 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.20723128328, Press = 2.2240304793331 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 14.49 | 14.49 | 14.49 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -25145.994 -25145.994 -25449.359 -25449.359 293.40383 293.40383 253197.66 253197.66 290.23591 290.23591 13000 -25142.953 -25142.953 -25441.128 -25441.128 288.38405 288.38405 253197.36 253197.36 418.58249 418.58249 Loop time of 16.367 on 1 procs for 1000 steps with 8000 atoms Performance: 5.279 ns/day, 4.546 hours/ns, 61.099 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 16.035 | 16.035 | 16.035 | 0.0 | 97.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.038052 | 0.038052 | 0.038052 | 0.0 | 0.23 Output | 3.6955e-05 | 3.6955e-05 | 3.6955e-05 | 0.0 | 0.00 Modify | 0.26716 | 0.26716 | 0.26716 | 0.0 | 1.63 Other | | 0.02631 | | | 0.16 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 144267 ave 144267 max 144267 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288534 ave 288534 max 288534 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288534 Ave neighs/atom = 36.0667 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.28557252894, Press = 2.66228258872934 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 14.49 | 14.49 | 14.49 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -25142.953 -25142.953 -25441.128 -25441.128 288.38405 288.38405 253197.36 253197.36 418.58249 418.58249 14000 -25146.86 -25146.86 -25451.058 -25451.058 294.20915 294.20915 253257.66 253257.66 173.13146 173.13146 Loop time of 16.0372 on 1 procs for 1000 steps with 8000 atoms Performance: 5.387 ns/day, 4.455 hours/ns, 62.355 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 15.706 | 15.706 | 15.706 | 0.0 | 97.93 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.038327 | 0.038327 | 0.038327 | 0.0 | 0.24 Output | 3.7193e-05 | 3.7193e-05 | 3.7193e-05 | 0.0 | 0.00 Modify | 0.26649 | 0.26649 | 0.26649 | 0.0 | 1.66 Other | | 0.02635 | | | 0.16 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 144390 ave 144390 max 144390 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288780 ave 288780 max 288780 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288780 Ave neighs/atom = 36.0975 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.323812530398, Press = 2.3786222461174 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 14.49 | 14.49 | 14.49 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -25146.86 -25146.86 -25451.058 -25451.058 294.20915 294.20915 253257.66 253257.66 173.13146 173.13146 15000 -25145.842 -25145.842 -25439.787 -25439.787 284.29252 284.29252 253383.47 253383.47 49.089838 49.089838 Loop time of 15.9561 on 1 procs for 1000 steps with 8000 atoms Performance: 5.415 ns/day, 4.432 hours/ns, 62.672 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 15.628 | 15.628 | 15.628 | 0.0 | 97.95 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037755 | 0.037755 | 0.037755 | 0.0 | 0.24 Output | 4.7207e-05 | 4.7207e-05 | 4.7207e-05 | 0.0 | 0.00 Modify | 0.26384 | 0.26384 | 0.26384 | 0.0 | 1.65 Other | | 0.02602 | | | 0.16 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 144171 ave 144171 max 144171 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288342 ave 288342 max 288342 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288342 Ave neighs/atom = 36.0427 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.318448555844, Press = 1.30035781204806 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 14.49 | 14.49 | 14.49 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -25145.842 -25145.842 -25439.787 -25439.787 284.29252 284.29252 253383.47 253383.47 49.089838 49.089838 16000 -25145.997 -25145.997 -25447.471 -25447.471 291.57499 291.57499 253502.95 253502.95 -153.44848 -153.44848 Loop time of 16.5171 on 1 procs for 1000 steps with 8000 atoms Performance: 5.231 ns/day, 4.588 hours/ns, 60.543 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 16.183 | 16.183 | 16.183 | 0.0 | 97.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.039047 | 0.039047 | 0.039047 | 0.0 | 0.24 Output | 4.3869e-05 | 4.3869e-05 | 4.3869e-05 | 0.0 | 0.00 Modify | 0.26881 | 0.26881 | 0.26881 | 0.0 | 1.63 Other | | 0.02658 | | | 0.16 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 144415 ave 144415 max 144415 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288830 ave 288830 max 288830 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288830 Ave neighs/atom = 36.1037 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.219688677715, Press = 0.898670902856918 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 14.49 | 14.49 | 14.49 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -25145.997 -25145.997 -25447.471 -25447.471 291.57499 291.57499 253502.95 253502.95 -153.44848 -153.44848 17000 -25151.013 -25151.013 -25446.527 -25446.527 285.81015 285.81015 253479.81 253479.81 -149.57633 -149.57633 Loop time of 15.9001 on 1 procs for 1000 steps with 8000 atoms Performance: 5.434 ns/day, 4.417 hours/ns, 62.893 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 15.571 | 15.571 | 15.571 | 0.0 | 97.93 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.036905 | 0.036905 | 0.036905 | 0.0 | 0.23 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.26634 | 0.26634 | 0.26634 | 0.0 | 1.68 Other | | 0.02547 | | | 0.16 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 143827 ave 143827 max 143827 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 287654 ave 287654 max 287654 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 287654 Ave neighs/atom = 35.9567 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.160761596764, Press = 0.921855757761438 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 14.49 | 14.49 | 14.49 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -25151.013 -25151.013 -25446.527 -25446.527 285.81015 285.81015 253479.81 253479.81 -149.57633 -149.57633 18000 -25144.527 -25144.527 -25444.765 -25444.765 290.37952 290.37952 253530.36 253530.36 -201.80662 -201.80662 Loop time of 15.9851 on 1 procs for 1000 steps with 8000 atoms Performance: 5.405 ns/day, 4.440 hours/ns, 62.558 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 15.659 | 15.659 | 15.659 | 0.0 | 97.96 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037144 | 0.037144 | 0.037144 | 0.0 | 0.23 Output | 3.8862e-05 | 3.8862e-05 | 3.8862e-05 | 0.0 | 0.00 Modify | 0.2638 | 0.2638 | 0.2638 | 0.0 | 1.65 Other | | 0.02524 | | | 0.16 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 143932 ave 143932 max 143932 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 287864 ave 287864 max 287864 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 287864 Ave neighs/atom = 35.983 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.135349954433, Press = 0.827697637260055 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 14.49 | 14.49 | 14.49 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -25144.527 -25144.527 -25444.765 -25444.765 290.37952 290.37952 253530.36 253530.36 -201.80662 -201.80662 19000 -25144.707 -25144.707 -25442.007 -25442.007 287.53807 287.53807 253681.48 253681.48 -464.46734 -464.46734 Loop time of 15.6864 on 1 procs for 1000 steps with 8000 atoms Performance: 5.508 ns/day, 4.357 hours/ns, 63.749 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 15.359 | 15.359 | 15.359 | 0.0 | 97.91 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037032 | 0.037032 | 0.037032 | 0.0 | 0.24 Output | 3.6955e-05 | 3.6955e-05 | 3.6955e-05 | 0.0 | 0.00 Modify | 0.26472 | 0.26472 | 0.26472 | 0.0 | 1.69 Other | | 0.02538 | | | 0.16 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 144093 ave 144093 max 144093 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 288186 ave 288186 max 288186 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 288186 Ave neighs/atom = 36.0232 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.154162460082, Press = 0.575191354026409 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 14.49 | 14.49 | 14.49 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -25144.707 -25144.707 -25442.007 -25442.007 287.53807 287.53807 253681.48 253681.48 -464.46734 -464.46734 20000 -25139.12 -25139.12 -25444.668 -25444.668 295.51529 295.51529 253701.69 253701.69 -475.77685 -475.77685 Loop time of 15.5118 on 1 procs for 1000 steps with 8000 atoms Performance: 5.570 ns/day, 4.309 hours/ns, 64.467 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 15.189 | 15.189 | 15.189 | 0.0 | 97.92 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.035741 | 0.035741 | 0.035741 | 0.0 | 0.23 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.26241 | 0.26241 | 0.26241 | 0.0 | 1.69 Other | | 0.02488 | | | 0.16 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 143994 ave 143994 max 143994 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 287988 ave 287988 max 287988 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 287988 Ave neighs/atom = 35.9985 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.166051521548, Press = 0.205727745470855 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 14.49 | 14.49 | 14.49 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -25139.12 -25139.12 -25444.668 -25444.668 295.51529 295.51529 253701.69 253701.69 -475.77685 -475.77685 21000 -25151.72 -25151.72 -25447.626 -25447.626 286.18942 286.18942 253563.93 253563.93 -283.684 -283.684 Loop time of 15.0057 on 1 procs for 1000 steps with 8000 atoms Performance: 5.758 ns/day, 4.168 hours/ns, 66.641 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 14.682 | 14.682 | 14.682 | 0.0 | 97.84 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.034993 | 0.034993 | 0.034993 | 0.0 | 0.23 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.26452 | 0.26452 | 0.26452 | 0.0 | 1.76 Other | | 0.0241 | | | 0.16 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 143806 ave 143806 max 143806 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 287612 ave 287612 max 287612 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 287612 Ave neighs/atom = 35.9515 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T293.15.out" else "print 'not_converged' file output/vol_T293.15.out" print '${V}' file output/vol_T293.15.out 253411.892385754 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0