/usr/local/lib/python3.8/dist-packages/ase/atoms.py:967: VisibleDeprecationWarning: Use get_global_number_of_atoms() instead warnings.warn('Use get_global_number_of_atoms() instead', Traceback (most recent call last): File "/usr/local/lib/python3.8/dist-packages/ase/calculators/kim/kimpy_wrappers.py", line 24, in check_call return f(*args, **kwargs) File "/usr/local/lib/python3.8/dist-packages/ase/calculators/kim/kimpy_wrappers.py", line 155, in compute return self.kim_model.compute(compute_args_wrapped.compute_args, release_GIL) RuntimeError: the model does not provide an Extension routine! or the model's Extension routine returns error! During handling of the above exception, another exception occurred: Traceback (most recent call last): File "../../td/VacancyFormationMigration__TD_554849987965_001/runner", line 365, in main() File "../../td/VacancyFormationMigration__TD_554849987965_001/runner", line 355, in main res = instance.getResults() File "../../td/VacancyFormationMigration__TD_554849987965_001/runner", line 254, in getResults migrationEnergy, formationEnergy = self._getResultsForSize(size) File "../../td/VacancyFormationMigration__TD_554849987965_001/runner", line 135, in _getResultsForSize minimizer.run(fmax = C.MDMIN_TOL, steps = C.MDMIN_MAX_STEPS) File "/usr/local/lib/python3.8/dist-packages/ase/optimize/optimize.py", line 269, in run return Dynamics.run(self) File "/usr/local/lib/python3.8/dist-packages/ase/optimize/optimize.py", line 156, in run for converged in Dynamics.irun(self): File "/usr/local/lib/python3.8/dist-packages/ase/optimize/optimize.py", line 143, in irun self.log() File "/usr/local/lib/python3.8/dist-packages/ase/optimize/optimize.py", line 283, in log forces = self.atoms.get_forces() File "/usr/local/lib/python3.8/dist-packages/ase/neb.py", line 688, in get_forces forces = super().get_forces() File "/usr/local/lib/python3.8/dist-packages/ase/neb.py", line 405, in get_forces energies[i] = images[i].get_potential_energy() File "/usr/local/lib/python3.8/dist-packages/ase/atoms.py", line 731, in get_potential_energy energy = self._calc.get_potential_energy(self) File "/usr/local/lib/python3.8/dist-packages/ase/calculators/calculator.py", line 709, in get_potential_energy energy = self.get_property('energy', atoms) File "/usr/local/lib/python3.8/dist-packages/ase/calculators/calculator.py", line 737, in get_property self.calculate(atoms, [name], system_changes) File "/usr/local/lib/python3.8/dist-packages/ase/calculators/kim/kimmodel.py", line 265, in calculate self.kim_model.compute(self.compute_args, self.release_GIL) File "/usr/local/lib/python3.8/dist-packages/ase/calculators/kim/kimpy_wrappers.py", line 32, in myfunc return check_call(func, *args, **kwargs) File "/usr/local/lib/python3.8/dist-packages/ase/calculators/kim/kimpy_wrappers.py", line 26, in check_call raise KimpyError(f'Calling kimpy function "{f.__name__}" failed:\n {str(e)}') ase.calculators.kim.exceptions.KimpyError: Calling kimpy function "compute" failed: the model does not provide an Extension routine! or the model's Extension routine returns error! Command exited with non-zero status 1 {"realtime":7.72,"usertime":3.93,"systime":3.05,"memmax":369736,"memavg":0}