-------------------------------------------------------------------------- By default, for Open MPI 4.0 and later, infiniband ports on a device are not used by default. The intent is to use UCX for these devices. You can override this policy by setting the btl_openib_allow_ib MCA parameter to true. Local host: acn07 Local adapter: mlx5_0 Local port: 1 -------------------------------------------------------------------------- -------------------------------------------------------------------------- WARNING: There was an error initializing an OpenFabrics device. Local host: acn07 Local device: mlx5_0 -------------------------------------------------------------------------- [acn07:3355986] *** Process received signal *** [acn07:3355986] Signal: Segmentation fault (11) [acn07:3355986] Signal code: Invalid permissions (2) [acn07:3355986] Failing at address: 0x55abb1b2e6a0 [acn07:3355986] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7fd4d6a0e090] [acn07:3355986] [ 1] [0x55abb1b2e6a0] [acn07:3355986] *** End of error message *** Traceback (most recent call last): File "../../td/TriclinicPBCEnergyAndForces__TD_892847239811_003/runner", line 45, in run_lammps lammps_process = subprocess.check_call( File "/usr/lib/python3.8/subprocess.py", line 364, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['lammps', '-in', 'isolated_atom.lammps.Si.in']' died with . During handling of the above exception, another exception occurred: Traceback (most recent call last): File "../../td/TriclinicPBCEnergyAndForces__TD_892847239811_003/runner", line 207, in isolated_atom_energies[symbol] = get_isolated_atom_energy( File "../../td/TriclinicPBCEnergyAndForces__TD_892847239811_003/runner", line 71, in get_isolated_atom_energy run_lammps(templated_input, lammps_output) File "../../td/TriclinicPBCEnergyAndForces__TD_892847239811_003/runner", line 55, in run_lammps raise Exception("LAMMPS did not exit properly:\n" + extrainfo) Exception: LAMMPS did not exit properly: LAMMPS (2 Aug 2023 - Update 1) Command exited with non-zero status 1 {"realtime":4.71,"usertime":3.12,"systime":1.29,"memmax":273460,"memavg":0}