OpenBLAS blas_thread_init: pthread_create failed for thread 34 of 64: Resource temporarily unavailable OpenBLAS blas_thread_init: RLIMIT_NPROC 4096 current, 16384 max Traceback (most recent call last): File "/work2/08773/bwaters/stampede2/bwaters/job-9b6013f4-edd3-4ea8-9a87-bd768beb3e00-007-c09ee65c-cace-4ed1-b395-aefddae68c35/TE_937519953396_000-and-SM_473463498269_000-1682975978/staged_job_files/repository/td/EquilibriumCrystalStructure__TD_457028483760_000/util/aflow_util.py", line 510, in build_atoms_from_prototype dataset=refine_symmetry(atoms) File "/usr/local/lib/python3.8/dist-packages/ase/spacegroup/symmetrize.py", line 41, in refine_symmetry dataset = check_symmetry(atoms, symprec, verbose=verbose) File "/usr/local/lib/python3.8/dist-packages/ase/spacegroup/symmetrize.py", line 93, in check_symmetry dataset = spglib.get_symmetry_dataset(atoms_to_spglib_cell(atoms), File "/usr/local/lib/python3.8/dist-packages/ase/utils/__init__.py", line 596, in atoms_to_spglib_cell atoms.get_scaled_positions(), File "/usr/local/lib/python3.8/dist-packages/ase/atoms.py", line 1858, in get_scaled_positions fractional = self.cell.scaled_positions(self.positions) File "/usr/local/lib/python3.8/dist-packages/ase/cell.py", line 258, in scaled_positions return np.linalg.solve(self.complete().T, np.transpose(positions)).T File "<__array_function__ internals>", line 200, in solve File "/usr/local/lib/python3.8/dist-packages/numpy/linalg/linalg.py", line 386, in solve r = gufunc(a, b, signature=signature, extobj=extobj) KeyboardInterrupt During handling of the above exception, another exception occurred: Traceback (most recent call last): File "../../td/EquilibriumCrystalStructure__TD_457028483760_000/runner", line 140, in atoms = aflow.build_atoms_from_prototype(species,prototype_label,param_values_superlist[i]) File "/work2/08773/bwaters/stampede2/bwaters/job-9b6013f4-edd3-4ea8-9a87-bd768beb3e00-007-c09ee65c-cace-4ed1-b395-aefddae68c35/TE_937519953396_000-and-SM_473463498269_000-1682975978/staged_job_files/repository/td/EquilibriumCrystalStructure__TD_457028483760_000/util/aflow_util.py", line 512, in build_atoms_from_prototype raise self.failedRefineSymmetryException("WARNING: Error while trying to refine symmetry of ASE atoms object") util.aflow_util.failedRefineSymmetryException: WARNING: Error while trying to refine symmetry of ASE atoms object Command exited with non-zero status 1 {"realtime":18.80,"usertime":26.23,"systime":31.14,"memmax":112236,"memavg":0}