# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.4522534608840942*${_u_distance} variable latticeconst_converted equal 3.4522534608840942*1 lattice bcc ${latticeconst_converted} lattice bcc 3.45225346088409 Lattice spacing in x,y,z = 3.4522535 3.4522535 3.4522535 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (34.522535 34.522535 34.522535) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 2000 atoms using lattice units in orthogonal box = (0.0000000 0.0000000 0.0000000) to (34.522535 34.522535 34.522535) create_atoms CPU = 0.002 seconds variable mass_converted equal 6.941*${_u_mass} variable mass_converted equal 6.941*1 kim_interactions Li WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Li #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_CuiGaoCui_2012_LiSi__MO_557492625287_001 pair_coeff * * Li #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 6.941 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 41144.1430241516 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 41144.1430241516/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 41144.1430241516/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 41144.1430241516/(1*1*${_u_distance}) variable V0_metal equal 41144.1430241516/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 41144.1430241516*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 41144.1430241516 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 253.15*${_u_temperature} variable temp_converted equal 253.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 253.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "253.15 - 0.2" variable T_up equal "253.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_557492625287_001#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.701 | 3.701 | 3.701 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -3229.1844 -3229.1844 -3294.5961 -3294.5961 253.15 253.15 41144.143 41144.143 1698.116 1698.116 1000 -3163.9595 -3163.9595 -3228.0745 -3228.0745 248.13172 248.13172 42704.135 42704.135 -402.51463 -402.51463 Loop time of 129.191 on 1 procs for 1000 steps with 2000 atoms Performance: 0.669 ns/day, 35.886 hours/ns, 7.740 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 128.31 | 128.31 | 128.31 | 0.0 | 99.32 Neigh | 0.3796 | 0.3796 | 0.3796 | 0.0 | 0.29 Comm | 0.08865 | 0.08865 | 0.08865 | 0.0 | 0.07 Output | 0.00022979 | 0.00022979 | 0.00022979 | 0.0 | 0.00 Modify | 0.35853 | 0.35853 | 0.35853 | 0.0 | 0.28 Other | | 0.05616 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3128.00 ave 3128 max 3128 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119104.0 ave 119104 max 119104 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119104 Ave neighs/atom = 59.552000 Neighbor list builds = 17 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -3163.9595 -3163.9595 -3228.0745 -3228.0745 248.13172 248.13172 42704.135 42704.135 -402.51463 -402.51463 2000 -3164.3652 -3164.3652 -3230.0827 -3230.0827 254.33351 254.33351 42493.529 42493.529 159.29038 159.29038 Loop time of 140.543 on 1 procs for 1000 steps with 2000 atoms Performance: 0.615 ns/day, 39.040 hours/ns, 7.115 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 139.51 | 139.51 | 139.51 | 0.0 | 99.26 Neigh | 0.48485 | 0.48485 | 0.48485 | 0.0 | 0.34 Comm | 0.096612 | 0.096612 | 0.096612 | 0.0 | 0.07 Output | 0.0001884 | 0.0001884 | 0.0001884 | 0.0 | 0.00 Modify | 0.39548 | 0.39548 | 0.39548 | 0.0 | 0.28 Other | | 0.05922 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3147.00 ave 3147 max 3147 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119180.0 ave 119180 max 119180 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119180 Ave neighs/atom = 59.590000 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -3164.3652 -3164.3652 -3230.0827 -3230.0827 254.33351 254.33351 42493.529 42493.529 159.29038 159.29038 3000 -3164.5934 -3164.5934 -3229.3715 -3229.3715 250.69801 250.69801 42540.218 42540.218 21.162849 21.162849 Loop time of 129.89 on 1 procs for 1000 steps with 2000 atoms Performance: 0.665 ns/day, 36.080 hours/ns, 7.699 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 128.93 | 128.93 | 128.93 | 0.0 | 99.26 Neigh | 0.46775 | 0.46775 | 0.46775 | 0.0 | 0.36 Comm | 0.089794 | 0.089794 | 0.089794 | 0.0 | 0.07 Output | 0.00022188 | 0.00022188 | 0.00022188 | 0.0 | 0.00 Modify | 0.35059 | 0.35059 | 0.35059 | 0.0 | 0.27 Other | | 0.05567 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3114.00 ave 3114 max 3114 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119042.0 ave 119042 max 119042 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119042 Ave neighs/atom = 59.521000 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -3164.5934 -3164.5934 -3229.3715 -3229.3715 250.69801 250.69801 42540.218 42540.218 21.162849 21.162849 4000 -3163.1536 -3163.1536 -3229.0436 -3229.0436 255.00109 255.00109 42615.076 42615.076 -141.94387 -141.94387 Loop time of 123.582 on 1 procs for 1000 steps with 2000 atoms Performance: 0.699 ns/day, 34.328 hours/ns, 8.092 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 122.68 | 122.68 | 122.68 | 0.0 | 99.27 Neigh | 0.43064 | 0.43064 | 0.43064 | 0.0 | 0.35 Comm | 0.085976 | 0.085976 | 0.085976 | 0.0 | 0.07 Output | 0.00022886 | 0.00022886 | 0.00022886 | 0.0 | 0.00 Modify | 0.33327 | 0.33327 | 0.33327 | 0.0 | 0.27 Other | | 0.05447 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3133.00 ave 3133 max 3133 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119068.0 ave 119068 max 119068 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119068 Ave neighs/atom = 59.534000 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -3163.1536 -3163.1536 -3229.0436 -3229.0436 255.00109 255.00109 42615.076 42615.076 -141.94387 -141.94387 5000 -3164.7869 -3164.7869 -3230.7357 -3230.7357 255.22855 255.22855 42461.69 42461.69 156.39857 156.39857 Loop time of 139.507 on 1 procs for 1000 steps with 2000 atoms Performance: 0.619 ns/day, 38.752 hours/ns, 7.168 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 138.46 | 138.46 | 138.46 | 0.0 | 99.25 Neigh | 0.48931 | 0.48931 | 0.48931 | 0.0 | 0.35 Comm | 0.096622 | 0.096622 | 0.096622 | 0.0 | 0.07 Output | 0.00015764 | 0.00015764 | 0.00015764 | 0.0 | 0.00 Modify | 0.39742 | 0.39742 | 0.39742 | 0.0 | 0.28 Other | | 0.05806 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3154.00 ave 3154 max 3154 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119182.0 ave 119182 max 119182 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119182 Ave neighs/atom = 59.591000 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.904148092025, Press = 83.4821090416422 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -3164.7869 -3164.7869 -3230.7357 -3230.7357 255.22855 255.22855 42461.69 42461.69 156.39857 156.39857 6000 -3165.2689 -3165.2689 -3229.8972 -3229.8972 250.11823 250.11823 42554.668 42554.668 -92.460075 -92.460075 Loop time of 139.984 on 1 procs for 1000 steps with 2000 atoms Performance: 0.617 ns/day, 38.884 hours/ns, 7.144 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 138.98 | 138.98 | 138.98 | 0.0 | 99.28 Neigh | 0.45992 | 0.45992 | 0.45992 | 0.0 | 0.33 Comm | 0.094026 | 0.094026 | 0.094026 | 0.0 | 0.07 Output | 0.00015488 | 0.00015488 | 0.00015488 | 0.0 | 0.00 Modify | 0.39738 | 0.39738 | 0.39738 | 0.0 | 0.28 Other | | 0.05576 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3168.00 ave 3168 max 3168 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119124.0 ave 119124 max 119124 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119124 Ave neighs/atom = 59.562000 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 250.985840981427, Press = 31.7577577906766 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -3165.2689 -3165.2689 -3229.8972 -3229.8972 250.11823 250.11823 42554.668 42554.668 -92.460075 -92.460075 7000 -3161.1001 -3161.1001 -3227.2518 -3227.2518 256.01387 256.01387 42638.349 42638.349 -149.49651 -149.49651 Loop time of 138.084 on 1 procs for 1000 steps with 2000 atoms Performance: 0.626 ns/day, 38.357 hours/ns, 7.242 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 137.06 | 137.06 | 137.06 | 0.0 | 99.26 Neigh | 0.45711 | 0.45711 | 0.45711 | 0.0 | 0.33 Comm | 0.095908 | 0.095908 | 0.095908 | 0.0 | 0.07 Output | 0.00019237 | 0.00019237 | 0.00019237 | 0.0 | 0.00 Modify | 0.41173 | 0.41173 | 0.41173 | 0.0 | 0.30 Other | | 0.05731 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3135.00 ave 3135 max 3135 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119060.0 ave 119060 max 119060 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119060 Ave neighs/atom = 59.530000 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.370512577151, Press = -3.67662623962483 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -3161.1001 -3161.1001 -3227.2518 -3227.2518 256.01387 256.01387 42638.349 42638.349 -149.49651 -149.49651 8000 -3165.8355 -3165.8355 -3231.5659 -3231.5659 254.38338 254.38338 42403.879 42403.879 264.22471 264.22471 Loop time of 144.642 on 1 procs for 1000 steps with 2000 atoms Performance: 0.597 ns/day, 40.178 hours/ns, 6.914 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 143.55 | 143.55 | 143.55 | 0.0 | 99.25 Neigh | 0.49536 | 0.49536 | 0.49536 | 0.0 | 0.34 Comm | 0.099175 | 0.099175 | 0.099175 | 0.0 | 0.07 Output | 0.00015436 | 0.00015436 | 0.00015436 | 0.0 | 0.00 Modify | 0.43362 | 0.43362 | 0.43362 | 0.0 | 0.30 Other | | 0.05933 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3134.00 ave 3134 max 3134 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119162.0 ave 119162 max 119162 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119162 Ave neighs/atom = 59.581000 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.672908408649, Press = 6.49797204239719 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -3165.8355 -3165.8355 -3231.5659 -3231.5659 254.38338 254.38338 42403.879 42403.879 264.22471 264.22471 9000 -3163.8082 -3163.8082 -3227.6178 -3227.6178 246.94979 246.94979 42642.616 42642.616 -311.88944 -311.88944 Loop time of 132.275 on 1 procs for 1000 steps with 2000 atoms Performance: 0.653 ns/day, 36.743 hours/ns, 7.560 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 131.3 | 131.3 | 131.3 | 0.0 | 99.26 Neigh | 0.44829 | 0.44829 | 0.44829 | 0.0 | 0.34 Comm | 0.091893 | 0.091893 | 0.091893 | 0.0 | 0.07 Output | 0.00015921 | 0.00015921 | 0.00015921 | 0.0 | 0.00 Modify | 0.38137 | 0.38137 | 0.38137 | 0.0 | 0.29 Other | | 0.05588 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3141.00 ave 3141 max 3141 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119130.0 ave 119130 max 119130 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119130 Ave neighs/atom = 59.565000 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.336301397106, Press = 3.91577586480552 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -3163.8082 -3163.8082 -3227.6178 -3227.6178 246.94979 246.94979 42642.616 42642.616 -311.88944 -311.88944 10000 -3163.9369 -3163.9369 -3228.9963 -3228.9963 251.78673 251.78673 42436.519 42436.519 348.66007 348.66007 Loop time of 124.176 on 1 procs for 1000 steps with 2000 atoms Performance: 0.696 ns/day, 34.493 hours/ns, 8.053 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 123.23 | 123.23 | 123.23 | 0.0 | 99.24 Neigh | 0.45597 | 0.45597 | 0.45597 | 0.0 | 0.37 Comm | 0.088162 | 0.088162 | 0.088162 | 0.0 | 0.07 Output | 0.00015572 | 0.00015572 | 0.00015572 | 0.0 | 0.00 Modify | 0.35192 | 0.35192 | 0.35192 | 0.0 | 0.28 Other | | 0.05308 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3169.00 ave 3169 max 3169 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119208.0 ave 119208 max 119208 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119208 Ave neighs/atom = 59.604000 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.607305195918, Press = 3.09022185810986 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -3163.9369 -3163.9369 -3228.9963 -3228.9963 251.78673 251.78673 42436.519 42436.519 348.66007 348.66007 11000 -3163.3928 -3163.3928 -3229.1164 -3229.1164 254.35702 254.35702 42675.169 42675.169 -316.39243 -316.39243 Loop time of 128.11 on 1 procs for 1000 steps with 2000 atoms Performance: 0.674 ns/day, 35.586 hours/ns, 7.806 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.14 | 127.14 | 127.14 | 0.0 | 99.24 Neigh | 0.46355 | 0.46355 | 0.46355 | 0.0 | 0.36 Comm | 0.090032 | 0.090032 | 0.090032 | 0.0 | 0.07 Output | 0.00021369 | 0.00021369 | 0.00021369 | 0.0 | 0.00 Modify | 0.36385 | 0.36385 | 0.36385 | 0.0 | 0.28 Other | | 0.05424 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3135.00 ave 3135 max 3135 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 118938.0 ave 118938 max 118938 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 118938 Ave neighs/atom = 59.469000 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.830109905144, Press = 1.39714243353771 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -3163.3928 -3163.3928 -3229.1164 -3229.1164 254.35702 254.35702 42675.169 42675.169 -316.39243 -316.39243 12000 -3165.1008 -3165.1008 -3230.7541 -3230.7541 254.08522 254.08522 42475.738 42475.738 176.957 176.957 Loop time of 140.877 on 1 procs for 1000 steps with 2000 atoms Performance: 0.613 ns/day, 39.132 hours/ns, 7.098 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 139.84 | 139.84 | 139.84 | 0.0 | 99.27 Neigh | 0.46308 | 0.46308 | 0.46308 | 0.0 | 0.33 Comm | 0.09655 | 0.09655 | 0.09655 | 0.0 | 0.07 Output | 0.00015513 | 0.00015513 | 0.00015513 | 0.0 | 0.00 Modify | 0.41711 | 0.41711 | 0.41711 | 0.0 | 0.30 Other | | 0.05854 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3141.00 ave 3141 max 3141 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119144.0 ave 119144 max 119144 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119144 Ave neighs/atom = 59.572000 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.849000524259, Press = 0.140148640843554 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -3165.1008 -3165.1008 -3230.7541 -3230.7541 254.08522 254.08522 42475.738 42475.738 176.957 176.957 13000 -3159.4559 -3159.4559 -3225.366 -3225.366 255.07891 255.07891 42683.69 42683.69 -134.1249 -134.1249 Loop time of 131.824 on 1 procs for 1000 steps with 2000 atoms Performance: 0.655 ns/day, 36.618 hours/ns, 7.586 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 130.82 | 130.82 | 130.82 | 0.0 | 99.24 Neigh | 0.46763 | 0.46763 | 0.46763 | 0.0 | 0.35 Comm | 0.091614 | 0.091614 | 0.091614 | 0.0 | 0.07 Output | 0.00015419 | 0.00015419 | 0.00015419 | 0.0 | 0.00 Modify | 0.38473 | 0.38473 | 0.38473 | 0.0 | 0.29 Other | | 0.05672 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3150.00 ave 3150 max 3150 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119096.0 ave 119096 max 119096 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119096 Ave neighs/atom = 59.548000 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.962489771018, Press = 5.12626151705158 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -3159.4559 -3159.4559 -3225.366 -3225.366 255.07891 255.07891 42683.69 42683.69 -134.1249 -134.1249 14000 -3164.3423 -3164.3423 -3229.5262 -3229.5262 252.26867 252.26867 42651.612 42651.612 -336.82399 -336.82399 Loop time of 123.251 on 1 procs for 1000 steps with 2000 atoms Performance: 0.701 ns/day, 34.236 hours/ns, 8.114 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 122.31 | 122.31 | 122.31 | 0.0 | 99.23 Neigh | 0.45171 | 0.45171 | 0.45171 | 0.0 | 0.37 Comm | 0.086257 | 0.086257 | 0.086257 | 0.0 | 0.07 Output | 0.0001552 | 0.0001552 | 0.0001552 | 0.0 | 0.00 Modify | 0.35032 | 0.35032 | 0.35032 | 0.0 | 0.28 Other | | 0.0555 | | | 0.05 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3192.00 ave 3192 max 3192 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119032.0 ave 119032 max 119032 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119032 Ave neighs/atom = 59.516000 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.069746190159, Press = -2.44119697629903 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -3164.3423 -3164.3423 -3229.5262 -3229.5262 252.26867 252.26867 42651.612 42651.612 -336.82399 -336.82399 15000 -3163.6264 -3163.6264 -3228.7968 -3228.7968 252.21624 252.21624 42351.625 42351.625 576.21561 576.21561 Loop time of 133.398 on 1 procs for 1000 steps with 2000 atoms Performance: 0.648 ns/day, 37.055 hours/ns, 7.496 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 132.39 | 132.39 | 132.39 | 0.0 | 99.25 Neigh | 0.47202 | 0.47202 | 0.47202 | 0.0 | 0.35 Comm | 0.091767 | 0.091767 | 0.091767 | 0.0 | 0.07 Output | 0.0004172 | 0.0004172 | 0.0004172 | 0.0 | 0.00 Modify | 0.38453 | 0.38453 | 0.38453 | 0.0 | 0.29 Other | | 0.05717 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3169.00 ave 3169 max 3169 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119290.0 ave 119290 max 119290 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119290 Ave neighs/atom = 59.645000 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.977480692546, Press = 2.57183170000522 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -3163.6264 -3163.6264 -3228.7968 -3228.7968 252.21624 252.21624 42351.625 42351.625 576.21561 576.21561 16000 -3168.5193 -3168.5193 -3231.2896 -3231.2896 242.92731 242.92731 42677.912 42677.912 -490.64881 -490.64881 Loop time of 143.847 on 1 procs for 1000 steps with 2000 atoms Performance: 0.601 ns/day, 39.957 hours/ns, 6.952 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 142.76 | 142.76 | 142.76 | 0.0 | 99.24 Neigh | 0.49442 | 0.49442 | 0.49442 | 0.0 | 0.34 Comm | 0.10007 | 0.10007 | 0.10007 | 0.0 | 0.07 Output | 0.00021324 | 0.00021324 | 0.00021324 | 0.0 | 0.00 Modify | 0.43424 | 0.43424 | 0.43424 | 0.0 | 0.30 Other | | 0.05992 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3100.00 ave 3100 max 3100 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 118948.0 ave 118948 max 118948 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 118948 Ave neighs/atom = 59.474000 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.944743820142, Press = 1.61130012915705 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -3168.5193 -3168.5193 -3231.2896 -3231.2896 242.92731 242.92731 42677.912 42677.912 -490.64881 -490.64881 17000 -3164.8836 -3164.8836 -3230.3475 -3230.3475 253.35213 253.35213 42400.408 42400.408 372.29099 372.29099 Loop time of 129.781 on 1 procs for 1000 steps with 2000 atoms Performance: 0.666 ns/day, 36.050 hours/ns, 7.705 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 128.77 | 128.77 | 128.77 | 0.0 | 99.22 Neigh | 0.48614 | 0.48614 | 0.48614 | 0.0 | 0.37 Comm | 0.091707 | 0.091707 | 0.091707 | 0.0 | 0.07 Output | 0.00015335 | 0.00015335 | 0.00015335 | 0.0 | 0.00 Modify | 0.37832 | 0.37832 | 0.37832 | 0.0 | 0.29 Other | | 0.05652 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3153.00 ave 3153 max 3153 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119164.0 ave 119164 max 119164 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119164 Ave neighs/atom = 59.582000 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.933340757134, Press = -0.545138849579345 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -3164.8836 -3164.8836 -3230.3475 -3230.3475 253.35213 253.35213 42400.408 42400.408 372.29099 372.29099 18000 -3161.2818 -3161.2818 -3227.3616 -3227.3616 255.73548 255.73548 42542.327 42542.327 129.48325 129.48325 Loop time of 123.29 on 1 procs for 1000 steps with 2000 atoms Performance: 0.701 ns/day, 34.247 hours/ns, 8.111 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 122.35 | 122.35 | 122.35 | 0.0 | 99.23 Neigh | 0.45245 | 0.45245 | 0.45245 | 0.0 | 0.37 Comm | 0.087149 | 0.087149 | 0.087149 | 0.0 | 0.07 Output | 0.00019177 | 0.00019177 | 0.00019177 | 0.0 | 0.00 Modify | 0.35002 | 0.35002 | 0.35002 | 0.0 | 0.28 Other | | 0.05428 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3152.00 ave 3152 max 3152 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119110.0 ave 119110 max 119110 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119110 Ave neighs/atom = 59.555000 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.089621070561, Press = 2.99427813990825 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -3161.2818 -3161.2818 -3227.3616 -3227.3616 255.73548 255.73548 42542.327 42542.327 129.48325 129.48325 19000 -3165.0169 -3165.0169 -3231.011 -3231.011 255.40388 255.40388 42551.203 42551.203 -65.51107 -65.51107 Loop time of 123.018 on 1 procs for 1000 steps with 2000 atoms Performance: 0.702 ns/day, 34.172 hours/ns, 8.129 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 122.08 | 122.08 | 122.08 | 0.0 | 99.23 Neigh | 0.45181 | 0.45181 | 0.45181 | 0.0 | 0.37 Comm | 0.086806 | 0.086806 | 0.086806 | 0.0 | 0.07 Output | 0.00015279 | 0.00015279 | 0.00015279 | 0.0 | 0.00 Modify | 0.34937 | 0.34937 | 0.34937 | 0.0 | 0.28 Other | | 0.05487 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3178.00 ave 3178 max 3178 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 118968.0 ave 118968 max 118968 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 118968 Ave neighs/atom = 59.484000 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T253.15.out" else "print 'not_converged' file output/vol_T253.15.out" print '${V}' file output/vol_T253.15.out 42549.3814050664 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0