# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.4522534608840942*${_u_distance} variable latticeconst_converted equal 3.4522534608840942*1 lattice bcc ${latticeconst_converted} lattice bcc 3.45225346088409 Lattice spacing in x,y,z = 3.4522535 3.4522535 3.4522535 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (34.522535 34.522535 34.522535) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 2000 atoms using lattice units in orthogonal box = (0.0000000 0.0000000 0.0000000) to (34.522535 34.522535 34.522535) create_atoms CPU = 0.003 seconds variable mass_converted equal 6.941*${_u_mass} variable mass_converted equal 6.941*1 kim_interactions Li WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Li #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_CuiGaoCui_2012_LiSi__MO_557492625287_001 pair_coeff * * Li #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 6.941 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 41144.1430241516 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 41144.1430241516/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 41144.1430241516/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 41144.1430241516/(1*1*${_u_distance}) variable V0_metal equal 41144.1430241516/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 41144.1430241516*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 41144.1430241516 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 293.15*${_u_temperature} variable temp_converted equal 293.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 293.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "293.15 - 0.2" variable T_up equal "293.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_557492625287_001#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.701 | 3.701 | 3.701 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -3218.8488 -3218.8488 -3294.5961 -3294.5961 293.15 293.15 41144.143 41144.143 1966.4332 1966.4332 1000 -3140.7683 -3140.7683 -3215.4957 -3215.4957 289.20263 289.20263 42866.449 42866.449 14.511108 14.511108 Loop time of 133.025 on 1 procs for 1000 steps with 2000 atoms Performance: 0.650 ns/day, 36.951 hours/ns, 7.517 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 132.05 | 132.05 | 132.05 | 0.0 | 99.27 Neigh | 0.44895 | 0.44895 | 0.44895 | 0.0 | 0.34 Comm | 0.092948 | 0.092948 | 0.092948 | 0.0 | 0.07 Output | 0.00022376 | 0.00022376 | 0.00022376 | 0.0 | 0.00 Modify | 0.3763 | 0.3763 | 0.3763 | 0.0 | 0.28 Other | | 0.05828 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3140.00 ave 3140 max 3140 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119102.0 ave 119102 max 119102 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119102 Ave neighs/atom = 59.551000 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -3140.7683 -3140.7683 -3215.4957 -3215.4957 289.20263 289.20263 42866.449 42866.449 14.511108 14.511108 2000 -3144.0937 -3144.0937 -3220.5703 -3220.5703 295.97256 295.97256 42914.757 42914.757 -280.9818 -280.9818 Loop time of 125.527 on 1 procs for 1000 steps with 2000 atoms Performance: 0.688 ns/day, 34.869 hours/ns, 7.966 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 124.56 | 124.56 | 124.56 | 0.0 | 99.23 Neigh | 0.47703 | 0.47703 | 0.47703 | 0.0 | 0.38 Comm | 0.08871 | 0.08871 | 0.08871 | 0.0 | 0.07 Output | 0.00023583 | 0.00023583 | 0.00023583 | 0.0 | 0.00 Modify | 0.34311 | 0.34311 | 0.34311 | 0.0 | 0.27 Other | | 0.0562 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3113.00 ave 3113 max 3113 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119068.0 ave 119068 max 119068 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119068 Ave neighs/atom = 59.534000 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -3144.0937 -3144.0937 -3220.5703 -3220.5703 295.97256 295.97256 42914.757 42914.757 -280.9818 -280.9818 3000 -3141.0256 -3141.0256 -3217.9096 -3217.9096 297.54934 297.54934 42900.083 42900.083 -103.48384 -103.48384 Loop time of 124.767 on 1 procs for 1000 steps with 2000 atoms Performance: 0.692 ns/day, 34.657 hours/ns, 8.015 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 123.79 | 123.79 | 123.79 | 0.0 | 99.22 Neigh | 0.49759 | 0.49759 | 0.49759 | 0.0 | 0.40 Comm | 0.087451 | 0.087451 | 0.087451 | 0.0 | 0.07 Output | 0.00019052 | 0.00019052 | 0.00019052 | 0.0 | 0.00 Modify | 0.33813 | 0.33813 | 0.33813 | 0.0 | 0.27 Other | | 0.0543 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3149.00 ave 3149 max 3149 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 118996.0 ave 118996 max 118996 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 118996 Ave neighs/atom = 59.498000 Neighbor list builds = 23 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -3141.0256 -3141.0256 -3217.9096 -3217.9096 297.54934 297.54934 42900.083 42900.083 -103.48384 -103.48384 4000 -3143.0741 -3143.0741 -3219.6165 -3219.6165 296.22704 296.22704 42714.945 42714.945 285.97915 285.97915 Loop time of 123.319 on 1 procs for 1000 steps with 2000 atoms Performance: 0.701 ns/day, 34.255 hours/ns, 8.109 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 122.35 | 122.35 | 122.35 | 0.0 | 99.22 Neigh | 0.49481 | 0.49481 | 0.49481 | 0.0 | 0.40 Comm | 0.087206 | 0.087206 | 0.087206 | 0.0 | 0.07 Output | 0.00022117 | 0.00022117 | 0.00022117 | 0.0 | 0.00 Modify | 0.33165 | 0.33165 | 0.33165 | 0.0 | 0.27 Other | | 0.05401 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3159.00 ave 3159 max 3159 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119172.0 ave 119172 max 119172 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119172 Ave neighs/atom = 59.586000 Neighbor list builds = 23 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -3143.0741 -3143.0741 -3219.6165 -3219.6165 296.22704 296.22704 42714.945 42714.945 285.97915 285.97915 5000 -3140.8442 -3140.8442 -3215.5401 -3215.5401 289.08095 289.08095 42780.693 42780.693 208.82223 208.82223 Loop time of 137.021 on 1 procs for 1000 steps with 2000 atoms Performance: 0.631 ns/day, 38.061 hours/ns, 7.298 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 135.96 | 135.96 | 135.96 | 0.0 | 99.23 Neigh | 0.52653 | 0.52653 | 0.52653 | 0.0 | 0.38 Comm | 0.094475 | 0.094475 | 0.094475 | 0.0 | 0.07 Output | 0.00020002 | 0.00020002 | 0.00020002 | 0.0 | 0.00 Modify | 0.38239 | 0.38239 | 0.38239 | 0.0 | 0.28 Other | | 0.05751 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3165.00 ave 3165 max 3165 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119196.0 ave 119196 max 119196 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119196 Ave neighs/atom = 59.598000 Neighbor list builds = 23 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 297.448569665424, Press = 281.039519656191 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -3140.8442 -3140.8442 -3215.5401 -3215.5401 289.08095 289.08095 42780.693 42780.693 208.82223 208.82223 6000 -3142.5225 -3142.5225 -3217.6392 -3217.6392 290.70963 290.70963 43006.359 43006.359 -446.78707 -446.78707 Loop time of 127.469 on 1 procs for 1000 steps with 2000 atoms Performance: 0.678 ns/day, 35.408 hours/ns, 7.845 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 126.46 | 126.46 | 126.46 | 0.0 | 99.21 Neigh | 0.50327 | 0.50327 | 0.50327 | 0.0 | 0.39 Comm | 0.089668 | 0.089668 | 0.089668 | 0.0 | 0.07 Output | 0.00015577 | 0.00015577 | 0.00015577 | 0.0 | 0.00 Modify | 0.36459 | 0.36459 | 0.36459 | 0.0 | 0.29 Other | | 0.05532 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3139.00 ave 3139 max 3139 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119054.0 ave 119054 max 119054 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119054 Ave neighs/atom = 59.527000 Neighbor list builds = 23 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.981286042921, Press = 61.4338699596557 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -3142.5225 -3142.5225 -3217.6392 -3217.6392 290.70963 290.70963 43006.359 43006.359 -446.78707 -446.78707 7000 -3143.7721 -3143.7721 -3219.9148 -3219.9148 294.68035 294.68035 42907.614 42907.614 -329.89068 -329.89068 Loop time of 123.106 on 1 procs for 1000 steps with 2000 atoms Performance: 0.702 ns/day, 34.196 hours/ns, 8.123 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 122.12 | 122.12 | 122.12 | 0.0 | 99.20 Neigh | 0.49491 | 0.49491 | 0.49491 | 0.0 | 0.40 Comm | 0.087487 | 0.087487 | 0.087487 | 0.0 | 0.07 Output | 0.00015305 | 0.00015305 | 0.00015305 | 0.0 | 0.00 Modify | 0.34989 | 0.34989 | 0.34989 | 0.0 | 0.28 Other | | 0.05446 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3171.00 ave 3171 max 3171 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 118972.0 ave 118972 max 118972 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 118972 Ave neighs/atom = 59.486000 Neighbor list builds = 23 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.415459776525, Press = -2.15012082884219 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -3143.7721 -3143.7721 -3219.9148 -3219.9148 294.68035 294.68035 42907.614 42907.614 -329.89068 -329.89068 8000 -3143.2678 -3143.2678 -3219.1901 -3219.1901 293.82708 293.82708 42838.108 42838.108 -49.803453 -49.803453 Loop time of 123.17 on 1 procs for 1000 steps with 2000 atoms Performance: 0.701 ns/day, 34.214 hours/ns, 8.119 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 122.19 | 122.19 | 122.19 | 0.0 | 99.20 Neigh | 0.4935 | 0.4935 | 0.4935 | 0.0 | 0.40 Comm | 0.086546 | 0.086546 | 0.086546 | 0.0 | 0.07 Output | 0.00015331 | 0.00015331 | 0.00015331 | 0.0 | 0.00 Modify | 0.34889 | 0.34889 | 0.34889 | 0.0 | 0.28 Other | | 0.05404 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3132.00 ave 3132 max 3132 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119070.0 ave 119070 max 119070 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119070 Ave neighs/atom = 59.535000 Neighbor list builds = 23 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.154810219419, Press = -2.54777689194873 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -3143.2678 -3143.2678 -3219.1901 -3219.1901 293.82708 293.82708 42838.108 42838.108 -49.803453 -49.803453 9000 -3139.7143 -3139.7143 -3216.6074 -3216.6074 297.58417 297.58417 42939.692 42939.692 -192.82659 -192.82659 Loop time of 134.815 on 1 procs for 1000 steps with 2000 atoms Performance: 0.641 ns/day, 37.449 hours/ns, 7.418 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 133.75 | 133.75 | 133.75 | 0.0 | 99.21 Neigh | 0.52177 | 0.52177 | 0.52177 | 0.0 | 0.39 Comm | 0.094433 | 0.094433 | 0.094433 | 0.0 | 0.07 Output | 0.00015649 | 0.00015649 | 0.00015649 | 0.0 | 0.00 Modify | 0.39427 | 0.39427 | 0.39427 | 0.0 | 0.29 Other | | 0.05678 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3154.00 ave 3154 max 3154 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119018.0 ave 119018 max 119018 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119018 Ave neighs/atom = 59.509000 Neighbor list builds = 23 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.781450343533, Press = 5.7658050159859 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -3139.7143 -3139.7143 -3216.6074 -3216.6074 297.58417 297.58417 42939.692 42939.692 -192.82659 -192.82659 10000 -3142.6438 -3142.6438 -3217.4039 -3217.4039 289.3291 289.3291 42872.345 42872.345 -132.79574 -132.79574 Loop time of 124.358 on 1 procs for 1000 steps with 2000 atoms Performance: 0.695 ns/day, 34.544 hours/ns, 8.041 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 123.37 | 123.37 | 123.37 | 0.0 | 99.20 Neigh | 0.49822 | 0.49822 | 0.49822 | 0.0 | 0.40 Comm | 0.088813 | 0.088813 | 0.088813 | 0.0 | 0.07 Output | 0.00015395 | 0.00015395 | 0.00015395 | 0.0 | 0.00 Modify | 0.3513 | 0.3513 | 0.3513 | 0.0 | 0.28 Other | | 0.05315 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3112.00 ave 3112 max 3112 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119088.0 ave 119088 max 119088 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119088 Ave neighs/atom = 59.544000 Neighbor list builds = 23 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.833346108338, Press = 4.25392818064484 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -3142.6438 -3142.6438 -3217.4039 -3217.4039 289.3291 289.3291 42872.345 42872.345 -132.79574 -132.79574 11000 -3139.6227 -3139.6227 -3216.1741 -3216.1741 296.26189 296.26189 42851.495 42851.495 99.117916 99.117916 Loop time of 124.435 on 1 procs for 1000 steps with 2000 atoms Performance: 0.694 ns/day, 34.565 hours/ns, 8.036 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 123.44 | 123.44 | 123.44 | 0.0 | 99.20 Neigh | 0.4983 | 0.4983 | 0.4983 | 0.0 | 0.40 Comm | 0.088684 | 0.088684 | 0.088684 | 0.0 | 0.07 Output | 0.00019184 | 0.00019184 | 0.00019184 | 0.0 | 0.00 Modify | 0.3512 | 0.3512 | 0.3512 | 0.0 | 0.28 Other | | 0.05353 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3158.00 ave 3158 max 3158 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119124.0 ave 119124 max 119124 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119124 Ave neighs/atom = 59.562000 Neighbor list builds = 23 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.518999956271, Press = 0.84526166861578 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -3139.6227 -3139.6227 -3216.1741 -3216.1741 296.26189 296.26189 42851.495 42851.495 99.117916 99.117916 12000 -3142.8953 -3142.8953 -3218.8417 -3218.8417 293.92038 293.92038 42860.718 42860.718 -147.55435 -147.55435 Loop time of 135.045 on 1 procs for 1000 steps with 2000 atoms Performance: 0.640 ns/day, 37.512 hours/ns, 7.405 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 133.98 | 133.98 | 133.98 | 0.0 | 99.21 Neigh | 0.52123 | 0.52123 | 0.52123 | 0.0 | 0.39 Comm | 0.094373 | 0.094373 | 0.094373 | 0.0 | 0.07 Output | 0.00018558 | 0.00018558 | 0.00018558 | 0.0 | 0.00 Modify | 0.39146 | 0.39146 | 0.39146 | 0.0 | 0.29 Other | | 0.057 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3125.00 ave 3125 max 3125 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119004.0 ave 119004 max 119004 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119004 Ave neighs/atom = 59.502000 Neighbor list builds = 23 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.772646509513, Press = -1.60864071658672 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -3142.8953 -3142.8953 -3218.8417 -3218.8417 293.92038 293.92038 42860.718 42860.718 -147.55435 -147.55435 13000 -3139.8453 -3139.8453 -3216.9011 -3216.9011 298.21375 298.21375 42880.374 42880.374 -58.040342 -58.040342 Loop time of 142.82 on 1 procs for 1000 steps with 2000 atoms Performance: 0.605 ns/day, 39.672 hours/ns, 7.002 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 141.71 | 141.71 | 141.71 | 0.0 | 99.23 Neigh | 0.54013 | 0.54013 | 0.54013 | 0.0 | 0.38 Comm | 0.097527 | 0.097527 | 0.097527 | 0.0 | 0.07 Output | 0.00015394 | 0.00015394 | 0.00015394 | 0.0 | 0.00 Modify | 0.40947 | 0.40947 | 0.40947 | 0.0 | 0.29 Other | | 0.05869 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3142.00 ave 3142 max 3142 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119190.0 ave 119190 max 119190 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119190 Ave neighs/atom = 59.595000 Neighbor list builds = 23 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.84423516407, Press = 1.951644014753 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -3139.8453 -3139.8453 -3216.9011 -3216.9011 298.21375 298.21375 42880.374 42880.374 -58.040342 -58.040342 14000 -3142.3401 -3142.3401 -3217.0643 -3217.0643 289.1901 289.1901 42839.575 42839.575 23.430675 23.430675 Loop time of 123.329 on 1 procs for 1000 steps with 2000 atoms Performance: 0.701 ns/day, 34.258 hours/ns, 8.108 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 122.34 | 122.34 | 122.34 | 0.0 | 99.20 Neigh | 0.49343 | 0.49343 | 0.49343 | 0.0 | 0.40 Comm | 0.08799 | 0.08799 | 0.08799 | 0.0 | 0.07 Output | 0.0001867 | 0.0001867 | 0.0001867 | 0.0 | 0.00 Modify | 0.34915 | 0.34915 | 0.34915 | 0.0 | 0.28 Other | | 0.05456 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3148.00 ave 3148 max 3148 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119206.0 ave 119206 max 119206 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119206 Ave neighs/atom = 59.603000 Neighbor list builds = 23 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.999457021627, Press = 2.18320124025835 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -3142.3401 -3142.3401 -3217.0643 -3217.0643 289.1901 289.1901 42839.575 42839.575 23.430675 23.430675 15000 -3142.349 -3142.349 -3218.0467 -3218.0467 292.95784 292.95784 43070.061 43070.061 -584.27739 -584.27739 Loop time of 127.102 on 1 procs for 1000 steps with 2000 atoms Performance: 0.680 ns/day, 35.306 hours/ns, 7.868 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 126.11 | 126.11 | 126.11 | 0.0 | 99.22 Neigh | 0.47899 | 0.47899 | 0.47899 | 0.0 | 0.38 Comm | 0.089471 | 0.089471 | 0.089471 | 0.0 | 0.07 Output | 0.00045602 | 0.00045602 | 0.00045602 | 0.0 | 0.00 Modify | 0.36508 | 0.36508 | 0.36508 | 0.0 | 0.29 Other | | 0.05573 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3104.00 ave 3104 max 3104 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 118900.0 ave 118900 max 118900 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 118900 Ave neighs/atom = 59.450000 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.929985171408, Press = -0.659280062679546 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -3142.349 -3142.349 -3218.0467 -3218.0467 292.95784 292.95784 43070.061 43070.061 -584.27739 -584.27739 16000 -3143.5349 -3143.5349 -3219.588 -3219.588 294.33328 294.33328 42776.265 42776.265 133.01512 133.01512 Loop time of 129.794 on 1 procs for 1000 steps with 2000 atoms Performance: 0.666 ns/day, 36.054 hours/ns, 7.705 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 128.77 | 128.77 | 128.77 | 0.0 | 99.21 Neigh | 0.50845 | 0.50845 | 0.50845 | 0.0 | 0.39 Comm | 0.091647 | 0.091647 | 0.091647 | 0.0 | 0.07 Output | 0.00015589 | 0.00015589 | 0.00015589 | 0.0 | 0.00 Modify | 0.37211 | 0.37211 | 0.37211 | 0.0 | 0.29 Other | | 0.05598 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3154.00 ave 3154 max 3154 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119036.0 ave 119036 max 119036 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119036 Ave neighs/atom = 59.518000 Neighbor list builds = 23 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.717578242457, Press = -2.61736258600626 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -3143.5349 -3143.5349 -3219.588 -3219.588 294.33328 294.33328 42776.265 42776.265 133.01512 133.01512 17000 -3140.4428 -3140.4428 -3216.3069 -3216.3069 293.60195 293.60195 42707.917 42707.917 466.4867 466.4867 Loop time of 129.61 on 1 procs for 1000 steps with 2000 atoms Performance: 0.667 ns/day, 36.003 hours/ns, 7.715 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 128.6 | 128.6 | 128.6 | 0.0 | 99.22 Neigh | 0.48923 | 0.48923 | 0.48923 | 0.0 | 0.38 Comm | 0.089734 | 0.089734 | 0.089734 | 0.0 | 0.07 Output | 0.00021176 | 0.00021176 | 0.00021176 | 0.0 | 0.00 Modify | 0.37674 | 0.37674 | 0.37674 | 0.0 | 0.29 Other | | 0.05616 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3129.00 ave 3129 max 3129 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119132.0 ave 119132 max 119132 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119132 Ave neighs/atom = 59.566000 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.519328241337, Press = -0.181309045934935 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -3140.4428 -3140.4428 -3216.3069 -3216.3069 293.60195 293.60195 42707.917 42707.917 466.4867 466.4867 18000 -3142.6712 -3142.6712 -3218.1076 -3218.1076 291.94689 291.94689 42868.328 42868.328 -154.916 -154.916 Loop time of 123.831 on 1 procs for 1000 steps with 2000 atoms Performance: 0.698 ns/day, 34.397 hours/ns, 8.076 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 122.84 | 122.84 | 122.84 | 0.0 | 99.20 Neigh | 0.49466 | 0.49466 | 0.49466 | 0.0 | 0.40 Comm | 0.088116 | 0.088116 | 0.088116 | 0.0 | 0.07 Output | 0.00015569 | 0.00015569 | 0.00015569 | 0.0 | 0.00 Modify | 0.35192 | 0.35192 | 0.35192 | 0.0 | 0.28 Other | | 0.05443 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3159.00 ave 3159 max 3159 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119310.0 ave 119310 max 119310 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119310 Ave neighs/atom = 59.655000 Neighbor list builds = 23 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.450148663039, Press = 2.55267114109378 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -3142.6712 -3142.6712 -3218.1076 -3218.1076 291.94689 291.94689 42868.328 42868.328 -154.916 -154.916 19000 -3143.7326 -3143.7326 -3218.7961 -3218.7961 290.5033 290.5033 42874.095 42874.095 -170.58994 -170.58994 Loop time of 123.293 on 1 procs for 1000 steps with 2000 atoms Performance: 0.701 ns/day, 34.248 hours/ns, 8.111 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 122.28 | 122.28 | 122.28 | 0.0 | 99.18 Neigh | 0.51582 | 0.51582 | 0.51582 | 0.0 | 0.42 Comm | 0.087729 | 0.087729 | 0.087729 | 0.0 | 0.07 Output | 0.00015765 | 0.00015765 | 0.00015765 | 0.0 | 0.00 Modify | 0.34982 | 0.34982 | 0.34982 | 0.0 | 0.28 Other | | 0.05466 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3098.00 ave 3098 max 3098 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 118990.0 ave 118990 max 118990 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 118990 Ave neighs/atom = 59.495000 Neighbor list builds = 24 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.586118305694, Press = 0.888467873641866 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -3143.7326 -3143.7326 -3218.7961 -3218.7961 290.5033 290.5033 42874.095 42874.095 -170.58994 -170.58994 20000 -3143.6305 -3143.6305 -3218.7543 -3218.7543 290.73668 290.73668 42726.189 42726.189 251.50209 251.50209 Loop time of 123.422 on 1 procs for 1000 steps with 2000 atoms Performance: 0.700 ns/day, 34.284 hours/ns, 8.102 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 122.43 | 122.43 | 122.43 | 0.0 | 99.20 Neigh | 0.49444 | 0.49444 | 0.49444 | 0.0 | 0.40 Comm | 0.088005 | 0.088005 | 0.088005 | 0.0 | 0.07 Output | 0.00015587 | 0.00015587 | 0.00015587 | 0.0 | 0.00 Modify | 0.35018 | 0.35018 | 0.35018 | 0.0 | 0.28 Other | | 0.0546 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3165.00 ave 3165 max 3165 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119348.0 ave 119348 max 119348 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119348 Ave neighs/atom = 59.674000 Neighbor list builds = 23 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.478029241993, Press = 0.553688795830503 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -3143.6305 -3143.6305 -3218.7543 -3218.7543 290.73668 290.73668 42726.189 42726.189 251.50209 251.50209 21000 -3142.5021 -3142.5021 -3217.9892 -3217.9892 292.14293 292.14293 42770.97 42770.97 124.72558 124.72558 Loop time of 123.568 on 1 procs for 1000 steps with 2000 atoms Performance: 0.699 ns/day, 34.324 hours/ns, 8.093 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 122.6 | 122.6 | 122.6 | 0.0 | 99.22 Neigh | 0.47451 | 0.47451 | 0.47451 | 0.0 | 0.38 Comm | 0.087764 | 0.087764 | 0.087764 | 0.0 | 0.07 Output | 0.00018054 | 0.00018054 | 0.00018054 | 0.0 | 0.00 Modify | 0.35098 | 0.35098 | 0.35098 | 0.0 | 0.28 Other | | 0.05426 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3142.00 ave 3142 max 3142 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119218.0 ave 119218 max 119218 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119218 Ave neighs/atom = 59.609000 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.36990468123, Press = -0.318673146752728 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -3142.5021 -3142.5021 -3217.9892 -3217.9892 292.14293 292.14293 42770.97 42770.97 124.72558 124.72558 22000 -3140.725 -3140.725 -3216.9296 -3216.9296 294.92001 294.92001 42818.359 42818.359 71.003441 71.003441 Loop time of 125.551 on 1 procs for 1000 steps with 2000 atoms Performance: 0.688 ns/day, 34.875 hours/ns, 7.965 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 124.55 | 124.55 | 124.55 | 0.0 | 99.20 Neigh | 0.50339 | 0.50339 | 0.50339 | 0.0 | 0.40 Comm | 0.090156 | 0.090156 | 0.090156 | 0.0 | 0.07 Output | 0.00015437 | 0.00015437 | 0.00015437 | 0.0 | 0.00 Modify | 0.35376 | 0.35376 | 0.35376 | 0.0 | 0.28 Other | | 0.05443 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3178.00 ave 3178 max 3178 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119128.0 ave 119128 max 119128 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119128 Ave neighs/atom = 59.564000 Neighbor list builds = 23 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.252958271528, Press = 1.62840524957373 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.702 | 3.702 | 3.702 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -3140.725 -3140.725 -3216.9296 -3216.9296 294.92001 294.92001 42818.359 42818.359 71.003441 71.003441 23000 -3144.4274 -3144.4274 -3219.0832 -3219.0832 288.92551 288.92551 42815.325 42815.325 -53.839787 -53.839787 Loop time of 124.986 on 1 procs for 1000 steps with 2000 atoms Performance: 0.691 ns/day, 34.718 hours/ns, 8.001 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 124.01 | 124.01 | 124.01 | 0.0 | 99.22 Neigh | 0.47862 | 0.47862 | 0.47862 | 0.0 | 0.38 Comm | 0.089644 | 0.089644 | 0.089644 | 0.0 | 0.07 Output | 0.00015413 | 0.00015413 | 0.00015413 | 0.0 | 0.00 Modify | 0.35384 | 0.35384 | 0.35384 | 0.0 | 0.28 Other | | 0.05412 | | | 0.04 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3110.00 ave 3110 max 3110 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119160.0 ave 119160 max 119160 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119160 Ave neighs/atom = 59.580000 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T293.15.out" else "print 'not_converged' file output/vol_T293.15.out" print '${V}' file output/vol_T293.15.out 42842.6514322107 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0