# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.5090000331401834*${_u_distance} variable latticeconst_converted equal 3.5090000331401834*1 lattice bcc ${latticeconst_converted} lattice bcc 3.50900003314018 Lattice spacing in x,y,z = 3.5090000 3.5090000 3.5090000 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (35.090000 35.090000 35.090000) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 2000 atoms using lattice units in orthogonal box = (0.0000000 0.0000000 0.0000000) to (35.090000 35.090000 35.090000) create_atoms CPU = 0.002 seconds variable mass_converted equal 6.941*${_u_mass} variable mass_converted equal 6.941*1 kim_interactions Li WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Li #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_RoyDuttaChakraborti_2021_AlLi__MO_971738391444_000 pair_coeff * * Li #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 6.941 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 43206.6024531732 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 43206.6024531732/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 43206.6024531732/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 43206.6024531732/(1*1*${_u_distance}) variable V0_metal equal 43206.6024531732/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 43206.6024531732*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 43206.6024531732 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 253.15*${_u_temperature} variable temp_converted equal 253.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 253.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "253.15 - 0.2" variable T_up equal "253.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_971738391444_000#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.701 | 3.701 | 3.701 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -3234.5883 -3234.5883 -3300 -3300 253.15 253.15 43206.602 43206.602 1617.0499 1617.0499 1000 -3222.8213 -3222.8213 -3288.6462 -3288.6462 254.74904 254.74904 47043.203 47043.203 149.93702 149.93702 Loop time of 92.4253 on 1 procs for 1000 steps with 2000 atoms Performance: 0.935 ns/day, 25.674 hours/ns, 10.820 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 91.451 | 91.451 | 91.451 | 0.0 | 98.95 Neigh | 0.4766 | 0.4766 | 0.4766 | 0.0 | 0.52 Comm | 0.090764 | 0.090764 | 0.090764 | 0.0 | 0.10 Output | 0.00020148 | 0.00020148 | 0.00020148 | 0.0 | 0.00 Modify | 0.35104 | 0.35104 | 0.35104 | 0.0 | 0.38 Other | | 0.0552 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3278.00 ave 3278 max 3278 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119654.0 ave 119654 max 119654 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119654 Ave neighs/atom = 59.827000 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -3222.8213 -3222.8213 -3288.6462 -3288.6462 254.74904 254.74904 47043.203 47043.203 149.93702 149.93702 2000 -3223.9199 -3223.9199 -3287.0173 -3287.0173 244.19322 244.19322 47180.094 47180.094 -143.17912 -143.17912 Loop time of 92.6948 on 1 procs for 1000 steps with 2000 atoms Performance: 0.932 ns/day, 25.749 hours/ns, 10.788 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 91.768 | 91.768 | 91.768 | 0.0 | 99.00 Neigh | 0.43024 | 0.43024 | 0.43024 | 0.0 | 0.46 Comm | 0.090639 | 0.090639 | 0.090639 | 0.0 | 0.10 Output | 0.00018868 | 0.00018868 | 0.00018868 | 0.0 | 0.00 Modify | 0.35041 | 0.35041 | 0.35041 | 0.0 | 0.38 Other | | 0.0558 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3297.00 ave 3297 max 3297 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119606.0 ave 119606 max 119606 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119606 Ave neighs/atom = 59.803000 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -3223.9199 -3223.9199 -3287.0173 -3287.0173 244.19322 244.19322 47180.094 47180.094 -143.17912 -143.17912 3000 -3219.9491 -3219.9491 -3286.0129 -3286.0129 255.674 255.674 47143.195 47143.195 -70.368364 -70.368364 Loop time of 94.8715 on 1 procs for 1000 steps with 2000 atoms Performance: 0.911 ns/day, 26.353 hours/ns, 10.541 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 93.901 | 93.901 | 93.901 | 0.0 | 98.98 Neigh | 0.45801 | 0.45801 | 0.45801 | 0.0 | 0.48 Comm | 0.092604 | 0.092604 | 0.092604 | 0.0 | 0.10 Output | 0.00028353 | 0.00028353 | 0.00028353 | 0.0 | 0.00 Modify | 0.36207 | 0.36207 | 0.36207 | 0.0 | 0.38 Other | | 0.05711 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3295.00 ave 3295 max 3295 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119648.0 ave 119648 max 119648 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119648 Ave neighs/atom = 59.824000 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -3219.9491 -3219.9491 -3286.0129 -3286.0129 255.674 255.674 47143.195 47143.195 -70.368364 -70.368364 4000 -3225.9196 -3225.9196 -3290.4066 -3290.4066 249.57134 249.57134 47118.985 47118.985 -27.885893 -27.885893 Loop time of 96.7924 on 1 procs for 1000 steps with 2000 atoms Performance: 0.893 ns/day, 26.887 hours/ns, 10.331 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 95.822 | 95.822 | 95.822 | 0.0 | 99.00 Neigh | 0.44927 | 0.44927 | 0.44927 | 0.0 | 0.46 Comm | 0.093141 | 0.093141 | 0.093141 | 0.0 | 0.10 Output | 0.00018578 | 0.00018578 | 0.00018578 | 0.0 | 0.00 Modify | 0.37127 | 0.37127 | 0.37127 | 0.0 | 0.38 Other | | 0.05684 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3309.00 ave 3309 max 3309 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119916.0 ave 119916 max 119916 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119916 Ave neighs/atom = 59.958000 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -3225.9196 -3225.9196 -3290.4066 -3290.4066 249.57134 249.57134 47118.985 47118.985 -27.885893 -27.885893 5000 -3228.2151 -3228.2151 -3292.6334 -3292.6334 249.30554 249.30554 47182.845 47182.845 -154.08904 -154.08904 Loop time of 95.5843 on 1 procs for 1000 steps with 2000 atoms Performance: 0.904 ns/day, 26.551 hours/ns, 10.462 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 94.641 | 94.641 | 94.641 | 0.0 | 99.01 Neigh | 0.43136 | 0.43136 | 0.43136 | 0.0 | 0.45 Comm | 0.092605 | 0.092605 | 0.092605 | 0.0 | 0.10 Output | 0.00015211 | 0.00015211 | 0.00015211 | 0.0 | 0.00 Modify | 0.36272 | 0.36272 | 0.36272 | 0.0 | 0.38 Other | | 0.0568 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3314.00 ave 3314 max 3314 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119734.0 ave 119734 max 119734 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119734 Ave neighs/atom = 59.867000 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 246.251511464279, Press = -153.418978262809 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -3228.2151 -3228.2151 -3292.6334 -3292.6334 249.30554 249.30554 47182.845 47182.845 -154.08904 -154.08904 6000 -3229.1008 -3229.1008 -3293.0129 -3293.0129 247.34623 247.34623 47133.827 47133.827 111.96272 111.96272 Loop time of 96.9271 on 1 procs for 1000 steps with 2000 atoms Performance: 0.891 ns/day, 26.924 hours/ns, 10.317 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 95.944 | 95.944 | 95.944 | 0.0 | 98.99 Neigh | 0.44929 | 0.44929 | 0.44929 | 0.0 | 0.46 Comm | 0.093602 | 0.093602 | 0.093602 | 0.0 | 0.10 Output | 0.00019043 | 0.00019043 | 0.00019043 | 0.0 | 0.00 Modify | 0.38286 | 0.38286 | 0.38286 | 0.0 | 0.39 Other | | 0.05694 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3341.00 ave 3341 max 3341 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119384.0 ave 119384 max 119384 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119384 Ave neighs/atom = 59.692000 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 251.388444898232, Press = -1.22056923017214 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -3229.1008 -3229.1008 -3293.0129 -3293.0129 247.34623 247.34623 47133.827 47133.827 111.96272 111.96272 7000 -3227.2709 -3227.2709 -3292.468 -3292.468 252.3197 252.3197 47115.921 47115.921 73.545933 73.545933 Loop time of 97.1077 on 1 procs for 1000 steps with 2000 atoms Performance: 0.890 ns/day, 26.974 hours/ns, 10.298 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 96.113 | 96.113 | 96.113 | 0.0 | 98.98 Neigh | 0.456 | 0.456 | 0.456 | 0.0 | 0.47 Comm | 0.094383 | 0.094383 | 0.094383 | 0.0 | 0.10 Output | 0.00019479 | 0.00019479 | 0.00019479 | 0.0 | 0.00 Modify | 0.3867 | 0.3867 | 0.3867 | 0.0 | 0.40 Other | | 0.05721 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3344.00 ave 3344 max 3344 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119534.0 ave 119534 max 119534 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119534 Ave neighs/atom = 59.767000 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.315886382932, Press = -0.322246136062508 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -3227.2709 -3227.2709 -3292.468 -3292.468 252.3197 252.3197 47115.921 47115.921 73.545933 73.545933 8000 -3226.8202 -3226.8202 -3292.5642 -3292.5642 254.43624 254.43624 47186.751 47186.751 -43.136787 -43.136787 Loop time of 98.6005 on 1 procs for 1000 steps with 2000 atoms Performance: 0.876 ns/day, 27.389 hours/ns, 10.142 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 97.608 | 97.608 | 97.608 | 0.0 | 98.99 Neigh | 0.44967 | 0.44967 | 0.44967 | 0.0 | 0.46 Comm | 0.094631 | 0.094631 | 0.094631 | 0.0 | 0.10 Output | 0.00015502 | 0.00015502 | 0.00015502 | 0.0 | 0.00 Modify | 0.39026 | 0.39026 | 0.39026 | 0.0 | 0.40 Other | | 0.0575 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3330.00 ave 3330 max 3330 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119588.0 ave 119588 max 119588 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119588 Ave neighs/atom = 59.794000 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.702170018395, Press = -7.8723790566248 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -3226.8202 -3226.8202 -3292.5642 -3292.5642 254.43624 254.43624 47186.751 47186.751 -43.136787 -43.136787 9000 -3226.3604 -3226.3604 -3290.9633 -3290.9633 250.01974 250.01974 47108.442 47108.442 35.327274 35.327274 Loop time of 99.2593 on 1 procs for 1000 steps with 2000 atoms Performance: 0.870 ns/day, 27.572 hours/ns, 10.075 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 98.227 | 98.227 | 98.227 | 0.0 | 98.96 Neigh | 0.47827 | 0.47827 | 0.47827 | 0.0 | 0.48 Comm | 0.096383 | 0.096383 | 0.096383 | 0.0 | 0.10 Output | 0.00015549 | 0.00015549 | 0.00015549 | 0.0 | 0.00 Modify | 0.39885 | 0.39885 | 0.39885 | 0.0 | 0.40 Other | | 0.05819 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3339.00 ave 3339 max 3339 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119840.0 ave 119840 max 119840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119840 Ave neighs/atom = 59.920000 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.741197370255, Press = 3.76121260371078 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -3226.3604 -3226.3604 -3290.9633 -3290.9633 250.01974 250.01974 47108.442 47108.442 35.327274 35.327274 10000 -3227.4558 -3227.4558 -3291.1923 -3291.1923 246.66679 246.66679 47368.127 47368.127 -540.43976 -540.43976 Loop time of 99.0536 on 1 procs for 1000 steps with 2000 atoms Performance: 0.872 ns/day, 27.515 hours/ns, 10.096 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 98.035 | 98.035 | 98.035 | 0.0 | 98.97 Neigh | 0.4707 | 0.4707 | 0.4707 | 0.0 | 0.48 Comm | 0.095016 | 0.095016 | 0.095016 | 0.0 | 0.10 Output | 0.00015788 | 0.00015788 | 0.00015788 | 0.0 | 0.00 Modify | 0.39372 | 0.39372 | 0.39372 | 0.0 | 0.40 Other | | 0.05864 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3355.00 ave 3355 max 3355 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119392.0 ave 119392 max 119392 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119392 Ave neighs/atom = 59.696000 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.855397441521, Press = -9.0806533512901 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -3227.4558 -3227.4558 -3291.1923 -3291.1923 246.66679 246.66679 47368.127 47368.127 -540.43976 -540.43976 11000 -3227.7384 -3227.7384 -3293.0792 -3293.0792 252.87581 252.87581 46899.883 46899.883 596.67403 596.67403 Loop time of 95.9941 on 1 procs for 1000 steps with 2000 atoms Performance: 0.900 ns/day, 26.665 hours/ns, 10.417 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 95.017 | 95.017 | 95.017 | 0.0 | 98.98 Neigh | 0.44746 | 0.44746 | 0.44746 | 0.0 | 0.47 Comm | 0.093057 | 0.093057 | 0.093057 | 0.0 | 0.10 Output | 0.000156 | 0.000156 | 0.000156 | 0.0 | 0.00 Modify | 0.3797 | 0.3797 | 0.3797 | 0.0 | 0.40 Other | | 0.05655 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3339.00 ave 3339 max 3339 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 120478.0 ave 120478 max 120478 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 120478 Ave neighs/atom = 60.239000 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.679160472591, Press = -1.13606764936915 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -3227.7384 -3227.7384 -3293.0792 -3293.0792 252.87581 252.87581 46899.883 46899.883 596.67403 596.67403 12000 -3225.0344 -3225.0344 -3291.2735 -3291.2735 256.35196 256.35196 47283.38 47283.38 -219.62885 -219.62885 Loop time of 97.3494 on 1 procs for 1000 steps with 2000 atoms Performance: 0.888 ns/day, 27.041 hours/ns, 10.272 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 96.364 | 96.364 | 96.364 | 0.0 | 98.99 Neigh | 0.45169 | 0.45169 | 0.45169 | 0.0 | 0.46 Comm | 0.093043 | 0.093043 | 0.093043 | 0.0 | 0.10 Output | 0.00019508 | 0.00019508 | 0.00019508 | 0.0 | 0.00 Modify | 0.38298 | 0.38298 | 0.38298 | 0.0 | 0.39 Other | | 0.05754 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3345.00 ave 3345 max 3345 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119440.0 ave 119440 max 119440 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119440 Ave neighs/atom = 59.720000 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.45569125591, Press = 0.120138291124761 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -3225.0344 -3225.0344 -3291.2735 -3291.2735 256.35196 256.35196 47283.38 47283.38 -219.62885 -219.62885 13000 -3226.1328 -3226.1328 -3290.9351 -3290.9351 250.79129 250.79129 47197.203 47197.203 -65.788677 -65.788677 Loop time of 97.8725 on 1 procs for 1000 steps with 2000 atoms Performance: 0.883 ns/day, 27.187 hours/ns, 10.217 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 96.91 | 96.91 | 96.91 | 0.0 | 99.02 Neigh | 0.42295 | 0.42295 | 0.42295 | 0.0 | 0.43 Comm | 0.094469 | 0.094469 | 0.094469 | 0.0 | 0.10 Output | 0.0001538 | 0.0001538 | 0.0001538 | 0.0 | 0.00 Modify | 0.38739 | 0.38739 | 0.38739 | 0.0 | 0.40 Other | | 0.0572 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3333.00 ave 3333 max 3333 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119642.0 ave 119642 max 119642 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119642 Ave neighs/atom = 59.821000 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.559895184713, Press = -0.712681176861988 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -3226.1328 -3226.1328 -3290.9351 -3290.9351 250.79129 250.79129 47197.203 47197.203 -65.788677 -65.788677 14000 -3228.707 -3228.707 -3292.4983 -3292.4983 246.8787 246.8787 47089.515 47089.515 41.312184 41.312184 Loop time of 99.7655 on 1 procs for 1000 steps with 2000 atoms Performance: 0.866 ns/day, 27.713 hours/ns, 10.024 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 98.783 | 98.783 | 98.783 | 0.0 | 99.02 Neigh | 0.43148 | 0.43148 | 0.43148 | 0.0 | 0.43 Comm | 0.094848 | 0.094848 | 0.094848 | 0.0 | 0.10 Output | 0.00015442 | 0.00015442 | 0.00015442 | 0.0 | 0.00 Modify | 0.39781 | 0.39781 | 0.39781 | 0.0 | 0.40 Other | | 0.05802 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3352.00 ave 3352 max 3352 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119618.0 ave 119618 max 119618 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119618 Ave neighs/atom = 59.809000 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.490566398972, Press = -1.00929100260349 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -3228.707 -3228.707 -3292.4983 -3292.4983 246.8787 246.8787 47089.515 47089.515 41.312184 41.312184 15000 -3228.154 -3228.154 -3293.0425 -3293.0425 251.12519 251.12519 47165.667 47165.667 -145.32617 -145.32617 Loop time of 99.5693 on 1 procs for 1000 steps with 2000 atoms Performance: 0.868 ns/day, 27.658 hours/ns, 10.043 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 98.59 | 98.59 | 98.59 | 0.0 | 99.02 Neigh | 0.43469 | 0.43469 | 0.43469 | 0.0 | 0.44 Comm | 0.094325 | 0.094325 | 0.094325 | 0.0 | 0.09 Output | 0.00015486 | 0.00015486 | 0.00015486 | 0.0 | 0.00 Modify | 0.39293 | 0.39293 | 0.39293 | 0.0 | 0.39 Other | | 0.05744 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3303.00 ave 3303 max 3303 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119812.0 ave 119812 max 119812 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119812 Ave neighs/atom = 59.906000 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.567784917718, Press = -0.214131081582349 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -3228.154 -3228.154 -3293.0425 -3293.0425 251.12519 251.12519 47165.667 47165.667 -145.32617 -145.32617 16000 -3226.1221 -3226.1221 -3291.4251 -3291.4251 252.7294 252.7294 47211.657 47211.657 -38.902418 -38.902418 Loop time of 98.6906 on 1 procs for 1000 steps with 2000 atoms Performance: 0.875 ns/day, 27.414 hours/ns, 10.133 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 97.705 | 97.705 | 97.705 | 0.0 | 99.00 Neigh | 0.4448 | 0.4448 | 0.4448 | 0.0 | 0.45 Comm | 0.094503 | 0.094503 | 0.094503 | 0.0 | 0.10 Output | 0.00019634 | 0.00019634 | 0.00019634 | 0.0 | 0.00 Modify | 0.38894 | 0.38894 | 0.38894 | 0.0 | 0.39 Other | | 0.05726 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3341.00 ave 3341 max 3341 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119480.0 ave 119480 max 119480 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119480 Ave neighs/atom = 59.740000 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.679404606097, Press = -3.36273201131441 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -3226.1221 -3226.1221 -3291.4251 -3291.4251 252.7294 252.7294 47211.657 47211.657 -38.902418 -38.902418 17000 -3227.6245 -3227.6245 -3291.18 -3291.18 245.96622 245.96622 47051.692 47051.692 130.56025 130.56025 Loop time of 97.6028 on 1 procs for 1000 steps with 2000 atoms Performance: 0.885 ns/day, 27.112 hours/ns, 10.246 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 96.597 | 96.597 | 96.597 | 0.0 | 98.97 Neigh | 0.46796 | 0.46796 | 0.46796 | 0.0 | 0.48 Comm | 0.095127 | 0.095127 | 0.095127 | 0.0 | 0.10 Output | 0.00015254 | 0.00015254 | 0.00015254 | 0.0 | 0.00 Modify | 0.38551 | 0.38551 | 0.38551 | 0.0 | 0.39 Other | | 0.05685 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3348.00 ave 3348 max 3348 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 120044.0 ave 120044 max 120044 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 120044 Ave neighs/atom = 60.022000 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.880096917063, Press = 2.55306216357994 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -3227.6245 -3227.6245 -3291.18 -3291.18 245.96622 245.96622 47051.692 47051.692 130.56025 130.56025 18000 -3227.9608 -3227.9608 -3291.5529 -3291.5529 246.10813 246.10813 47238.613 47238.613 -168.97739 -168.97739 Loop time of 98.3392 on 1 procs for 1000 steps with 2000 atoms Performance: 0.879 ns/day, 27.316 hours/ns, 10.169 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 97.374 | 97.374 | 97.374 | 0.0 | 99.02 Neigh | 0.42356 | 0.42356 | 0.42356 | 0.0 | 0.43 Comm | 0.094485 | 0.094485 | 0.094485 | 0.0 | 0.10 Output | 0.00015504 | 0.00015504 | 0.00015504 | 0.0 | 0.00 Modify | 0.38962 | 0.38962 | 0.38962 | 0.0 | 0.40 Other | | 0.0577 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3315.00 ave 3315 max 3315 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119296.0 ave 119296 max 119296 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119296 Ave neighs/atom = 59.648000 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.935214101911, Press = -2.46927258579648 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -3227.9608 -3227.9608 -3291.5529 -3291.5529 246.10813 246.10813 47238.613 47238.613 -168.97739 -168.97739 19000 -3225.9928 -3225.9928 -3290.5535 -3290.5535 249.85636 249.85636 47026.622 47026.622 264.72769 264.72769 Loop time of 97.4834 on 1 procs for 1000 steps with 2000 atoms Performance: 0.886 ns/day, 27.079 hours/ns, 10.258 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 96.518 | 96.518 | 96.518 | 0.0 | 99.01 Neigh | 0.42545 | 0.42545 | 0.42545 | 0.0 | 0.44 Comm | 0.093418 | 0.093418 | 0.093418 | 0.0 | 0.10 Output | 0.00015536 | 0.00015536 | 0.00015536 | 0.0 | 0.00 Modify | 0.38828 | 0.38828 | 0.38828 | 0.0 | 0.40 Other | | 0.0577 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3338.00 ave 3338 max 3338 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 120180.0 ave 120180 max 120180 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 120180 Ave neighs/atom = 60.090000 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.899123667607, Press = 1.00514300242394 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -3225.9928 -3225.9928 -3290.5535 -3290.5535 249.85636 249.85636 47026.622 47026.622 264.72769 264.72769 20000 -3226.3193 -3226.3193 -3291.0719 -3291.0719 250.59943 250.59943 47414.229 47414.229 -540.59888 -540.59888 Loop time of 98.1831 on 1 procs for 1000 steps with 2000 atoms Performance: 0.880 ns/day, 27.273 hours/ns, 10.185 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 97.189 | 97.189 | 97.189 | 0.0 | 98.99 Neigh | 0.45175 | 0.45175 | 0.45175 | 0.0 | 0.46 Comm | 0.094663 | 0.094663 | 0.094663 | 0.0 | 0.10 Output | 0.00015622 | 0.00015622 | 0.00015622 | 0.0 | 0.00 Modify | 0.39022 | 0.39022 | 0.39022 | 0.0 | 0.40 Other | | 0.05767 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3329.00 ave 3329 max 3329 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119112.0 ave 119112 max 119112 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119112 Ave neighs/atom = 59.556000 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T253.15.out" else "print 'not_converged' file output/vol_T253.15.out" print '${V}' file output/vol_T253.15.out 47151.1121087446 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0