# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.5090000331401834*${_u_distance} variable latticeconst_converted equal 3.5090000331401834*1 lattice bcc ${latticeconst_converted} lattice bcc 3.50900003314018 Lattice spacing in x,y,z = 3.509 3.509 3.509 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (35.09 35.09 35.09) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 2000 atoms using lattice units in orthogonal box = (0 0 0) to (35.09 35.09 35.09) create_atoms CPU = 0.000 seconds variable mass_converted equal 6.941*${_u_mass} variable mass_converted equal 6.941*1 kim_interactions Li WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Li #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_RoyDuttaChakraborti_2021_AlLi__MO_971738391444_001 pair_coeff * * Li #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 6.941 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 43206.6024531732 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 43206.6024531732/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 43206.6024531732/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 43206.6024531732/(1*1*${_u_distance}) variable V0_metal equal 43206.6024531732/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 43206.6024531732*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 43206.6024531732 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 253.15*${_u_temperature} variable temp_converted equal 253.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 253.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "253.15 - 0.2" variable T_up equal "253.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_971738391444_001#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.701 | 3.701 | 3.701 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -3234.5883 -3234.5883 -3300 -3300 253.15 253.15 43206.602 43206.602 1617.0499 1617.0499 1000 -3222.8213 -3222.8213 -3288.6462 -3288.6462 254.74904 254.74904 47043.203 47043.203 149.93702 149.93702 Loop time of 17.4322 on 1 procs for 1000 steps with 2000 atoms Performance: 4.956 ns/day, 4.842 hours/ns, 57.365 timesteps/s 99.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.235 | 17.235 | 17.235 | 0.0 | 98.87 Neigh | 0.11675 | 0.11675 | 0.11675 | 0.0 | 0.67 Comm | 0.013995 | 0.013995 | 0.013995 | 0.0 | 0.08 Output | 0.00012239 | 0.00012239 | 0.00012239 | 0.0 | 0.00 Modify | 0.061289 | 0.061289 | 0.061289 | 0.0 | 0.35 Other | | 0.005067 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3278 ave 3278 max 3278 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119654 ave 119654 max 119654 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119654 Ave neighs/atom = 59.827 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -3222.8213 -3222.8213 -3288.6462 -3288.6462 254.74904 254.74904 47043.203 47043.203 149.93702 149.93702 2000 -3223.9199 -3223.9199 -3287.0173 -3287.0173 244.19322 244.19322 47180.094 47180.094 -143.17912 -143.17912 Loop time of 17.305 on 1 procs for 1000 steps with 2000 atoms Performance: 4.993 ns/day, 4.807 hours/ns, 57.787 timesteps/s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.124 | 17.124 | 17.124 | 0.0 | 98.96 Neigh | 0.103 | 0.103 | 0.103 | 0.0 | 0.60 Comm | 0.013399 | 0.013399 | 0.013399 | 0.0 | 0.08 Output | 3.6178e-05 | 3.6178e-05 | 3.6178e-05 | 0.0 | 0.00 Modify | 0.059589 | 0.059589 | 0.059589 | 0.0 | 0.34 Other | | 0.00456 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3297 ave 3297 max 3297 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119606 ave 119606 max 119606 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119606 Ave neighs/atom = 59.803 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -3223.9199 -3223.9199 -3287.0173 -3287.0173 244.19322 244.19322 47180.094 47180.094 -143.17912 -143.17912 3000 -3219.9491 -3219.9491 -3286.0129 -3286.0129 255.674 255.674 47143.195 47143.195 -70.368364 -70.368364 Loop time of 17.2559 on 1 procs for 1000 steps with 2000 atoms Performance: 5.007 ns/day, 4.793 hours/ns, 57.951 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.072 | 17.072 | 17.072 | 0.0 | 98.93 Neigh | 0.10688 | 0.10688 | 0.10688 | 0.0 | 0.62 Comm | 0.013427 | 0.013427 | 0.013427 | 0.0 | 0.08 Output | 3.727e-05 | 3.727e-05 | 3.727e-05 | 0.0 | 0.00 Modify | 0.059401 | 0.059401 | 0.059401 | 0.0 | 0.34 Other | | 0.004508 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3295 ave 3295 max 3295 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119648 ave 119648 max 119648 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119648 Ave neighs/atom = 59.824 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -3219.9491 -3219.9491 -3286.0129 -3286.0129 255.674 255.674 47143.195 47143.195 -70.368364 -70.368364 4000 -3225.9196 -3225.9196 -3290.4066 -3290.4066 249.57134 249.57134 47118.985 47118.985 -27.885893 -27.885893 Loop time of 17.214 on 1 procs for 1000 steps with 2000 atoms Performance: 5.019 ns/day, 4.782 hours/ns, 58.092 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.032 | 17.032 | 17.032 | 0.0 | 98.94 Neigh | 0.10468 | 0.10468 | 0.10468 | 0.0 | 0.61 Comm | 0.013349 | 0.013349 | 0.013349 | 0.0 | 0.08 Output | 3.709e-05 | 3.709e-05 | 3.709e-05 | 0.0 | 0.00 Modify | 0.059325 | 0.059325 | 0.059325 | 0.0 | 0.34 Other | | 0.004518 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3309 ave 3309 max 3309 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119916 ave 119916 max 119916 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119916 Ave neighs/atom = 59.958 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -3225.9196 -3225.9196 -3290.4066 -3290.4066 249.57134 249.57134 47118.985 47118.985 -27.885893 -27.885893 5000 -3228.2151 -3228.2151 -3292.6334 -3292.6334 249.30554 249.30554 47182.845 47182.845 -154.08904 -154.08904 Loop time of 17.3559 on 1 procs for 1000 steps with 2000 atoms Performance: 4.978 ns/day, 4.821 hours/ns, 57.617 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.18 | 17.18 | 17.18 | 0.0 | 98.99 Neigh | 0.098426 | 0.098426 | 0.098426 | 0.0 | 0.57 Comm | 0.013356 | 0.013356 | 0.013356 | 0.0 | 0.08 Output | 2.2452e-05 | 2.2452e-05 | 2.2452e-05 | 0.0 | 0.00 Modify | 0.059534 | 0.059534 | 0.059534 | 0.0 | 0.34 Other | | 0.004517 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3314 ave 3314 max 3314 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119734 ave 119734 max 119734 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119734 Ave neighs/atom = 59.867 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 246.251511464279, Press = -153.418978262809 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.703 | 3.703 | 3.703 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -3228.2151 -3228.2151 -3292.6334 -3292.6334 249.30554 249.30554 47182.845 47182.845 -154.08904 -154.08904 6000 -3229.1008 -3229.1008 -3293.0129 -3293.0129 247.34623 247.34623 47133.827 47133.827 111.96272 111.96272 Loop time of 17.4557 on 1 procs for 1000 steps with 2000 atoms Performance: 4.950 ns/day, 4.849 hours/ns, 57.288 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.273 | 17.273 | 17.273 | 0.0 | 98.96 Neigh | 0.10265 | 0.10265 | 0.10265 | 0.0 | 0.59 Comm | 0.013322 | 0.013322 | 0.013322 | 0.0 | 0.08 Output | 2.2412e-05 | 2.2412e-05 | 2.2412e-05 | 0.0 | 0.00 Modify | 0.061628 | 0.061628 | 0.061628 | 0.0 | 0.35 Other | | 0.004574 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3341 ave 3341 max 3341 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119384 ave 119384 max 119384 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119384 Ave neighs/atom = 59.692 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 251.388444898232, Press = -1.22056923017214 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -3229.1008 -3229.1008 -3293.0129 -3293.0129 247.34623 247.34623 47133.827 47133.827 111.96272 111.96272 7000 -3227.2709 -3227.2709 -3292.468 -3292.468 252.3197 252.3197 47115.921 47115.921 73.545933 73.545933 Loop time of 17.3798 on 1 procs for 1000 steps with 2000 atoms Performance: 4.971 ns/day, 4.828 hours/ns, 57.538 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.198 | 17.198 | 17.198 | 0.0 | 98.96 Neigh | 0.10195 | 0.10195 | 0.10195 | 0.0 | 0.59 Comm | 0.013388 | 0.013388 | 0.013388 | 0.0 | 0.08 Output | 3.4595e-05 | 3.4595e-05 | 3.4595e-05 | 0.0 | 0.00 Modify | 0.061613 | 0.061613 | 0.061613 | 0.0 | 0.35 Other | | 0.004556 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3344 ave 3344 max 3344 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119534 ave 119534 max 119534 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119534 Ave neighs/atom = 59.767 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.315886382932, Press = -0.322246136062508 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -3227.2709 -3227.2709 -3292.468 -3292.468 252.3197 252.3197 47115.921 47115.921 73.545933 73.545933 8000 -3226.8202 -3226.8202 -3292.5642 -3292.5642 254.43624 254.43624 47186.751 47186.751 -43.136787 -43.136787 Loop time of 17.4534 on 1 procs for 1000 steps with 2000 atoms Performance: 4.950 ns/day, 4.848 hours/ns, 57.295 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.272 | 17.272 | 17.272 | 0.0 | 98.96 Neigh | 0.10223 | 0.10223 | 0.10223 | 0.0 | 0.59 Comm | 0.013466 | 0.013466 | 0.013466 | 0.0 | 0.08 Output | 2.2081e-05 | 2.2081e-05 | 2.2081e-05 | 0.0 | 0.00 Modify | 0.061612 | 0.061612 | 0.061612 | 0.0 | 0.35 Other | | 0.004569 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3330 ave 3330 max 3330 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119588 ave 119588 max 119588 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119588 Ave neighs/atom = 59.794 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.702170018395, Press = -7.8723790566248 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -3226.8202 -3226.8202 -3292.5642 -3292.5642 254.43624 254.43624 47186.751 47186.751 -43.136787 -43.136787 9000 -3226.3604 -3226.3604 -3290.9633 -3290.9633 250.01974 250.01974 47108.442 47108.442 35.327274 35.327274 Loop time of 17.4216 on 1 procs for 1000 steps with 2000 atoms Performance: 4.959 ns/day, 4.839 hours/ns, 57.400 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.235 | 17.235 | 17.235 | 0.0 | 98.93 Neigh | 0.10718 | 0.10718 | 0.10718 | 0.0 | 0.62 Comm | 0.01344 | 0.01344 | 0.01344 | 0.0 | 0.08 Output | 2.678e-05 | 2.678e-05 | 2.678e-05 | 0.0 | 0.00 Modify | 0.061586 | 0.061586 | 0.061586 | 0.0 | 0.35 Other | | 0.004531 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3339 ave 3339 max 3339 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119840 ave 119840 max 119840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119840 Ave neighs/atom = 59.92 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.741197370255, Press = 3.76121260371078 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -3226.3604 -3226.3604 -3290.9633 -3290.9633 250.01974 250.01974 47108.442 47108.442 35.327274 35.327274 10000 -3227.4558 -3227.4558 -3291.1923 -3291.1923 246.66679 246.66679 47368.127 47368.127 -540.43976 -540.43976 Loop time of 17.4821 on 1 procs for 1000 steps with 2000 atoms Performance: 4.942 ns/day, 4.856 hours/ns, 57.201 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.295 | 17.295 | 17.295 | 0.0 | 98.93 Neigh | 0.10715 | 0.10715 | 0.10715 | 0.0 | 0.61 Comm | 0.014058 | 0.014058 | 0.014058 | 0.0 | 0.08 Output | 3.3282e-05 | 3.3282e-05 | 3.3282e-05 | 0.0 | 0.00 Modify | 0.0616 | 0.0616 | 0.0616 | 0.0 | 0.35 Other | | 0.004577 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3355 ave 3355 max 3355 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119392 ave 119392 max 119392 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119392 Ave neighs/atom = 59.696 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.855397441521, Press = -9.0806533512901 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -3227.4558 -3227.4558 -3291.1923 -3291.1923 246.66679 246.66679 47368.127 47368.127 -540.43976 -540.43976 11000 -3227.7384 -3227.7384 -3293.0792 -3293.0792 252.87581 252.87581 46899.883 46899.883 596.67403 596.67403 Loop time of 17.4616 on 1 procs for 1000 steps with 2000 atoms Performance: 4.948 ns/day, 4.850 hours/ns, 57.268 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.279 | 17.279 | 17.279 | 0.0 | 98.96 Neigh | 0.10276 | 0.10276 | 0.10276 | 0.0 | 0.59 Comm | 0.013386 | 0.013386 | 0.013386 | 0.0 | 0.08 Output | 2.2372e-05 | 2.2372e-05 | 2.2372e-05 | 0.0 | 0.00 Modify | 0.061492 | 0.061492 | 0.061492 | 0.0 | 0.35 Other | | 0.00457 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3339 ave 3339 max 3339 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 120478 ave 120478 max 120478 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 120478 Ave neighs/atom = 60.239 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.679160472591, Press = -1.13606764936915 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -3227.7384 -3227.7384 -3293.0792 -3293.0792 252.87581 252.87581 46899.883 46899.883 596.67403 596.67403 12000 -3225.0344 -3225.0344 -3291.2735 -3291.2735 256.35196 256.35196 47283.38 47283.38 -219.62885 -219.62885 Loop time of 17.4321 on 1 procs for 1000 steps with 2000 atoms Performance: 4.956 ns/day, 4.842 hours/ns, 57.365 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.25 | 17.25 | 17.25 | 0.0 | 98.96 Neigh | 0.10257 | 0.10257 | 0.10257 | 0.0 | 0.59 Comm | 0.013387 | 0.013387 | 0.013387 | 0.0 | 0.08 Output | 2.2492e-05 | 2.2492e-05 | 2.2492e-05 | 0.0 | 0.00 Modify | 0.061521 | 0.061521 | 0.061521 | 0.0 | 0.35 Other | | 0.004552 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3345 ave 3345 max 3345 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119440 ave 119440 max 119440 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119440 Ave neighs/atom = 59.72 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.45569125591, Press = 0.120138291124761 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -3225.0344 -3225.0344 -3291.2735 -3291.2735 256.35196 256.35196 47283.38 47283.38 -219.62885 -219.62885 13000 -3226.1328 -3226.1328 -3290.9351 -3290.9351 250.79129 250.79129 47197.203 47197.203 -65.788677 -65.788677 Loop time of 17.4305 on 1 procs for 1000 steps with 2000 atoms Performance: 4.957 ns/day, 4.842 hours/ns, 57.371 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.254 | 17.254 | 17.254 | 0.0 | 98.99 Neigh | 0.096966 | 0.096966 | 0.096966 | 0.0 | 0.56 Comm | 0.013463 | 0.013463 | 0.013463 | 0.0 | 0.08 Output | 2.3615e-05 | 2.3615e-05 | 2.3615e-05 | 0.0 | 0.00 Modify | 0.061543 | 0.061543 | 0.061543 | 0.0 | 0.35 Other | | 0.004547 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3333 ave 3333 max 3333 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119642 ave 119642 max 119642 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119642 Ave neighs/atom = 59.821 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.559895184713, Press = -0.712681176861988 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -3226.1328 -3226.1328 -3290.9351 -3290.9351 250.79129 250.79129 47197.203 47197.203 -65.788677 -65.788677 14000 -3228.707 -3228.707 -3292.4983 -3292.4983 246.8787 246.8787 47089.515 47089.515 41.312184 41.312184 Loop time of 17.428 on 1 procs for 1000 steps with 2000 atoms Performance: 4.958 ns/day, 4.841 hours/ns, 57.379 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.251 | 17.251 | 17.251 | 0.0 | 98.99 Neigh | 0.097208 | 0.097208 | 0.097208 | 0.0 | 0.56 Comm | 0.013407 | 0.013407 | 0.013407 | 0.0 | 0.08 Output | 9.597e-05 | 9.597e-05 | 9.597e-05 | 0.0 | 0.00 Modify | 0.061537 | 0.061537 | 0.061537 | 0.0 | 0.35 Other | | 0.004576 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3352 ave 3352 max 3352 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119618 ave 119618 max 119618 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119618 Ave neighs/atom = 59.809 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.490566398972, Press = -1.00929100260349 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -3228.707 -3228.707 -3292.4983 -3292.4983 246.8787 246.8787 47089.515 47089.515 41.312184 41.312184 15000 -3228.154 -3228.154 -3293.0425 -3293.0425 251.12519 251.12519 47165.667 47165.667 -145.32617 -145.32617 Loop time of 17.4475 on 1 procs for 1000 steps with 2000 atoms Performance: 4.952 ns/day, 4.847 hours/ns, 57.315 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.27 | 17.27 | 17.27 | 0.0 | 98.98 Neigh | 0.097881 | 0.097881 | 0.097881 | 0.0 | 0.56 Comm | 0.013361 | 0.013361 | 0.013361 | 0.0 | 0.08 Output | 2.6259e-05 | 2.6259e-05 | 2.6259e-05 | 0.0 | 0.00 Modify | 0.061546 | 0.061546 | 0.061546 | 0.0 | 0.35 Other | | 0.004548 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3303 ave 3303 max 3303 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119812 ave 119812 max 119812 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119812 Ave neighs/atom = 59.906 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.567784917718, Press = -0.214131081582349 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -3228.154 -3228.154 -3293.0425 -3293.0425 251.12519 251.12519 47165.667 47165.667 -145.32617 -145.32617 16000 -3226.1221 -3226.1221 -3291.4251 -3291.4251 252.7294 252.7294 47211.657 47211.657 -38.902418 -38.902418 Loop time of 17.462 on 1 procs for 1000 steps with 2000 atoms Performance: 4.948 ns/day, 4.851 hours/ns, 57.267 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.28 | 17.28 | 17.28 | 0.0 | 98.96 Neigh | 0.10198 | 0.10198 | 0.10198 | 0.0 | 0.58 Comm | 0.013425 | 0.013425 | 0.013425 | 0.0 | 0.08 Output | 2.5277e-05 | 2.5277e-05 | 2.5277e-05 | 0.0 | 0.00 Modify | 0.061554 | 0.061554 | 0.061554 | 0.0 | 0.35 Other | | 0.004535 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3341 ave 3341 max 3341 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119480 ave 119480 max 119480 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119480 Ave neighs/atom = 59.74 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.679404606097, Press = -3.36273201131441 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -3226.1221 -3226.1221 -3291.4251 -3291.4251 252.7294 252.7294 47211.657 47211.657 -38.902418 -38.902418 17000 -3227.6245 -3227.6245 -3291.18 -3291.18 245.96622 245.96622 47051.692 47051.692 130.56025 130.56025 Loop time of 17.4699 on 1 procs for 1000 steps with 2000 atoms Performance: 4.946 ns/day, 4.853 hours/ns, 57.241 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.283 | 17.283 | 17.283 | 0.0 | 98.93 Neigh | 0.10695 | 0.10695 | 0.10695 | 0.0 | 0.61 Comm | 0.013493 | 0.013493 | 0.013493 | 0.0 | 0.08 Output | 3.3673e-05 | 3.3673e-05 | 3.3673e-05 | 0.0 | 0.00 Modify | 0.061623 | 0.061623 | 0.061623 | 0.0 | 0.35 Other | | 0.004567 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3348 ave 3348 max 3348 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 120044 ave 120044 max 120044 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 120044 Ave neighs/atom = 60.022 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.880096917063, Press = 2.55306216357994 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -3227.6245 -3227.6245 -3291.18 -3291.18 245.96622 245.96622 47051.692 47051.692 130.56025 130.56025 18000 -3227.9608 -3227.9608 -3291.5529 -3291.5529 246.10813 246.10813 47238.613 47238.613 -168.97739 -168.97739 Loop time of 17.4432 on 1 procs for 1000 steps with 2000 atoms Performance: 4.953 ns/day, 4.845 hours/ns, 57.329 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.266 | 17.266 | 17.266 | 0.0 | 98.99 Neigh | 0.097414 | 0.097414 | 0.097414 | 0.0 | 0.56 Comm | 0.013406 | 0.013406 | 0.013406 | 0.0 | 0.08 Output | 2.2613e-05 | 2.2613e-05 | 2.2613e-05 | 0.0 | 0.00 Modify | 0.06162 | 0.06162 | 0.06162 | 0.0 | 0.35 Other | | 0.004568 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3315 ave 3315 max 3315 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119296 ave 119296 max 119296 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119296 Ave neighs/atom = 59.648 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.935214101911, Press = -2.46927258579648 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -3227.9608 -3227.9608 -3291.5529 -3291.5529 246.10813 246.10813 47238.613 47238.613 -168.97739 -168.97739 19000 -3225.9928 -3225.9928 -3290.5535 -3290.5535 249.85636 249.85636 47026.622 47026.622 264.72769 264.72769 Loop time of 17.4581 on 1 procs for 1000 steps with 2000 atoms Performance: 4.949 ns/day, 4.849 hours/ns, 57.280 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.281 | 17.281 | 17.281 | 0.0 | 98.99 Neigh | 0.097512 | 0.097512 | 0.097512 | 0.0 | 0.56 Comm | 0.013337 | 0.013337 | 0.013337 | 0.0 | 0.08 Output | 2.2272e-05 | 2.2272e-05 | 2.2272e-05 | 0.0 | 0.00 Modify | 0.061538 | 0.061538 | 0.061538 | 0.0 | 0.35 Other | | 0.004549 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3338 ave 3338 max 3338 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 120180 ave 120180 max 120180 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 120180 Ave neighs/atom = 60.09 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.899123667607, Press = 1.00514300242394 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.704 | 3.704 | 3.704 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -3225.9928 -3225.9928 -3290.5535 -3290.5535 249.85636 249.85636 47026.622 47026.622 264.72769 264.72769 20000 -3226.3193 -3226.3193 -3291.0719 -3291.0719 250.59943 250.59943 47414.229 47414.229 -540.59888 -540.59888 Loop time of 17.4153 on 1 procs for 1000 steps with 2000 atoms Performance: 4.961 ns/day, 4.838 hours/ns, 57.421 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.233 | 17.233 | 17.233 | 0.0 | 98.95 Neigh | 0.10298 | 0.10298 | 0.10298 | 0.0 | 0.59 Comm | 0.01343 | 0.01343 | 0.01343 | 0.0 | 0.08 Output | 3.4074e-05 | 3.4074e-05 | 3.4074e-05 | 0.0 | 0.00 Modify | 0.061559 | 0.061559 | 0.061559 | 0.0 | 0.35 Other | | 0.004557 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3329 ave 3329 max 3329 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119112 ave 119112 max 119112 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119112 Ave neighs/atom = 59.556 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T253.15.out" else "print 'not_converged' file output/vol_T253.15.out" print '${V}' file output/vol_T253.15.out 47151.1121087446 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0