# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.4522535204887386*${_u_distance} variable latticeconst_converted equal 3.4522535204887386*1 lattice bcc ${latticeconst_converted} lattice bcc 3.45225352048874 Lattice spacing in x,y,z = 3.45225 3.45225 3.45225 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (34.5225 34.5225 34.5225) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 2000 atoms create_atoms CPU = 0.000386953 secs variable mass_converted equal 6.941*${_u_mass} variable mass_converted equal 6.941*1 kim_interactions Li #=== BEGIN kim_interactions ================================== pair_style meam/c pair_coeff * * /tmp/kim-simulator-model-parameter-file-directory-XXXXXXlYsIri/library.meam Li Si /tmp/kim-simulator-model-parameter-file-directory-XXXXXXlYsIri/LiSi.meam Li #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 6.941 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 41144.1451552659 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 41144.1451552659/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 41144.1451552659/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 41144.1451552659/(1*1*${_u_distance}) variable V0_metal equal 41144.1451552659/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 41144.1451552659*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 41144.1451552659 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 253.15*${_u_temperature} variable temp_converted equal 253.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 253.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "253.15 - 0.2" variable T_up equal "253.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 2 neighbor lists, perpetual/occasional/extra = 2 0 0 (1) pair meam/c, perpetual attributes: full, newton on pair build: full/bin/atomonly stencil: full/bin/3d bin: standard (2) pair meam/c, perpetual, half/full from (1) attributes: half, newton on pair build: halffull/newton stencil: none bin: none Per MPI rank memory allocation (min/avg/max) = 10.94 | 10.94 | 10.94 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -3229.1844 -3229.1844 -3294.5961 -3294.5961 253.15 253.15 41144.145 41144.145 1698.1092 1698.1092 1000 -3163.9595 -3163.9595 -3228.0745 -3228.0745 248.13173 248.13173 42704.135 42704.135 -402.51418 -402.51418 Loop time of 52.1793 on 1 procs for 1000 steps with 2000 atoms Performance: 1.656 ns/day, 14.494 hours/ns, 19.165 timesteps/s 42.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 51.701 | 51.701 | 51.701 | 0.0 | 99.08 Neigh | 0.21005 | 0.21005 | 0.21005 | 0.0 | 0.40 Comm | 0.050309 | 0.050309 | 0.050309 | 0.0 | 0.10 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.17573 | 0.17573 | 0.17573 | 0.0 | 0.34 Other | | 0.04204 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3128 ave 3128 max 3128 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59552 ave 59552 max 59552 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119104 ave 119104 max 119104 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119104 Ave neighs/atom = 59.552 Neighbor list builds = 17 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -3163.9595 -3163.9595 -3228.0745 -3228.0745 248.13173 248.13173 42704.135 42704.135 -402.51418 -402.51418 2000 -3164.3652 -3164.3652 -3230.0826 -3230.0826 254.33343 254.33343 42493.53 42493.53 159.28859 159.28859 Loop time of 52.4978 on 1 procs for 1000 steps with 2000 atoms Performance: 1.646 ns/day, 14.583 hours/ns, 19.048 timesteps/s 43.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 52.063 | 52.063 | 52.063 | 0.0 | 99.17 Neigh | 0.2571 | 0.2571 | 0.2571 | 0.0 | 0.49 Comm | 0.021786 | 0.021786 | 0.021786 | 0.0 | 0.04 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.1342 | 0.1342 | 0.1342 | 0.0 | 0.26 Other | | 0.02184 | | | 0.04 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3147 ave 3147 max 3147 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59590 ave 59590 max 59590 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119180 ave 119180 max 119180 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119180 Ave neighs/atom = 59.59 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -3164.3652 -3164.3652 -3230.0826 -3230.0826 254.33343 254.33343 42493.53 42493.53 159.28859 159.28859 3000 -3164.5934 -3164.5934 -3229.3714 -3229.3714 250.69724 250.69724 42540.218 42540.218 21.223658 21.223658 Loop time of 51.592 on 1 procs for 1000 steps with 2000 atoms Performance: 1.675 ns/day, 14.331 hours/ns, 19.383 timesteps/s 43.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 51.186 | 51.186 | 51.186 | 0.0 | 99.21 Neigh | 0.25292 | 0.25292 | 0.25292 | 0.0 | 0.49 Comm | 0.021693 | 0.021693 | 0.021693 | 0.0 | 0.04 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.12208 | 0.12208 | 0.12208 | 0.0 | 0.24 Other | | 0.008824 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3114 ave 3114 max 3114 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59521 ave 59521 max 59521 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119042 ave 119042 max 119042 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119042 Ave neighs/atom = 59.521 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -3164.5934 -3164.5934 -3229.3714 -3229.3714 250.69724 250.69724 42540.218 42540.218 21.223658 21.223658 4000 -3163.1533 -3163.1533 -3229.0425 -3229.0425 254.99795 254.99795 42615.091 42615.091 -141.68531 -141.68531 Loop time of 50.3055 on 1 procs for 1000 steps with 2000 atoms Performance: 1.718 ns/day, 13.974 hours/ns, 19.879 timesteps/s 44.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 49.857 | 49.857 | 49.857 | 0.0 | 99.11 Neigh | 0.23855 | 0.23855 | 0.23855 | 0.0 | 0.47 Comm | 0.045177 | 0.045177 | 0.045177 | 0.0 | 0.09 Output | 2.5034e-05 | 2.5034e-05 | 2.5034e-05 | 0.0 | 0.00 Modify | 0.15556 | 0.15556 | 0.15556 | 0.0 | 0.31 Other | | 0.008811 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3133 ave 3133 max 3133 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59532 ave 59532 max 59532 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119064 ave 119064 max 119064 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119064 Ave neighs/atom = 59.532 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -3163.1533 -3163.1533 -3229.0425 -3229.0425 254.99795 254.99795 42615.091 42615.091 -141.68531 -141.68531 5000 -3164.7887 -3164.7887 -3230.7418 -3230.7418 255.24546 255.24546 42461.615 42461.615 155.55746 155.55746 Loop time of 47.7212 on 1 procs for 1000 steps with 2000 atoms Performance: 1.811 ns/day, 13.256 hours/ns, 20.955 timesteps/s 47.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.215 | 47.215 | 47.215 | 0.0 | 98.94 Neigh | 0.22933 | 0.22933 | 0.22933 | 0.0 | 0.48 Comm | 0.048989 | 0.048989 | 0.048989 | 0.0 | 0.10 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.17518 | 0.17518 | 0.17518 | 0.0 | 0.37 Other | | 0.05282 | | | 0.11 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3152 ave 3152 max 3152 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59587 ave 59587 max 59587 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119174 ave 119174 max 119174 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119174 Ave neighs/atom = 59.587 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.892749680194, Press = 85.0452410234031 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -3164.7887 -3164.7887 -3230.7418 -3230.7418 255.24546 255.24546 42461.615 42461.615 155.55746 155.55746 6000 -3165.2797 -3165.2797 -3230.034 -3230.034 250.60607 250.60607 42554.105 42554.105 -67.861164 -67.861164 Loop time of 50.5838 on 1 procs for 1000 steps with 2000 atoms Performance: 1.708 ns/day, 14.051 hours/ns, 19.769 timesteps/s 44.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 50.05 | 50.05 | 50.05 | 0.0 | 98.94 Neigh | 0.24763 | 0.24763 | 0.24763 | 0.0 | 0.49 Comm | 0.090467 | 0.090467 | 0.090467 | 0.0 | 0.18 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.17354 | 0.17354 | 0.17354 | 0.0 | 0.34 Other | | 0.02212 | | | 0.04 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3182 ave 3182 max 3182 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59533 ave 59533 max 59533 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119066 ave 119066 max 119066 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119066 Ave neighs/atom = 59.533 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 250.965360892617, Press = 32.1714109235439 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -3165.2797 -3165.2797 -3230.034 -3230.034 250.60607 250.60607 42554.105 42554.105 -67.861164 -67.861164 7000 -3161.1973 -3161.1973 -3227.3056 -3227.3056 255.84605 255.84605 42619.645 42619.645 -79.175144 -79.175144 Loop time of 46.6531 on 1 procs for 1000 steps with 2000 atoms Performance: 1.852 ns/day, 12.959 hours/ns, 21.435 timesteps/s 48.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.269 | 46.269 | 46.269 | 0.0 | 99.18 Neigh | 0.20834 | 0.20834 | 0.20834 | 0.0 | 0.45 Comm | 0.034866 | 0.034866 | 0.034866 | 0.0 | 0.07 Output | 2.1935e-05 | 2.1935e-05 | 2.1935e-05 | 0.0 | 0.00 Modify | 0.13214 | 0.13214 | 0.13214 | 0.0 | 0.28 Other | | 0.00877 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3141 ave 3141 max 3141 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59530 ave 59530 max 59530 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119060 ave 119060 max 119060 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119060 Ave neighs/atom = 59.53 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.391351878962, Press = -3.9798425568055 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -3161.1973 -3161.1973 -3227.3056 -3227.3056 255.84605 255.84605 42619.645 42619.645 -79.175144 -79.175144 8000 -3165.4223 -3165.4223 -3231.0653 -3231.0653 254.04511 254.04511 42433.302 42433.302 218.88749 218.88749 Loop time of 42.8389 on 1 procs for 1000 steps with 2000 atoms Performance: 2.017 ns/day, 11.900 hours/ns, 23.343 timesteps/s 52.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 42.471 | 42.471 | 42.471 | 0.0 | 99.14 Neigh | 0.18839 | 0.18839 | 0.18839 | 0.0 | 0.44 Comm | 0.021846 | 0.021846 | 0.021846 | 0.0 | 0.05 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.12571 | 0.12571 | 0.12571 | 0.0 | 0.29 Other | | 0.03194 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3172 ave 3172 max 3172 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59584 ave 59584 max 59584 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119168 ave 119168 max 119168 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119168 Ave neighs/atom = 59.584 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.819019430635, Press = 7.95133704730523 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -3165.4223 -3165.4223 -3231.0653 -3231.0653 254.04511 254.04511 42433.302 42433.302 218.88749 218.88749 9000 -3164.716 -3164.716 -3229.0558 -3229.0558 249.00164 249.00164 42686.344 42686.344 -412.81341 -412.81341 Loop time of 43.4503 on 1 procs for 1000 steps with 2000 atoms Performance: 1.988 ns/day, 12.070 hours/ns, 23.015 timesteps/s 51.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.055 | 43.055 | 43.055 | 0.0 | 99.09 Neigh | 0.18588 | 0.18588 | 0.18588 | 0.0 | 0.43 Comm | 0.021727 | 0.021727 | 0.021727 | 0.0 | 0.05 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.15443 | 0.15443 | 0.15443 | 0.0 | 0.36 Other | | 0.03293 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3140 ave 3140 max 3140 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59468 ave 59468 max 59468 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 118936 ave 118936 max 118936 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 118936 Ave neighs/atom = 59.468 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.302715331126, Press = 3.95458240476758 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -3164.716 -3164.716 -3229.0558 -3229.0558 249.00164 249.00164 42686.344 42686.344 -412.81341 -412.81341 10000 -3164.1789 -3164.1789 -3228.6612 -3228.6612 249.55321 249.55321 42392.597 42392.597 460.84147 460.84147 Loop time of 37.6139 on 1 procs for 1000 steps with 2000 atoms Performance: 2.297 ns/day, 10.448 hours/ns, 26.586 timesteps/s 59.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.302 | 37.302 | 37.302 | 0.0 | 99.17 Neigh | 0.15721 | 0.15721 | 0.15721 | 0.0 | 0.42 Comm | 0.021469 | 0.021469 | 0.021469 | 0.0 | 0.06 Output | 3.0041e-05 | 3.0041e-05 | 3.0041e-05 | 0.0 | 0.00 Modify | 0.12451 | 0.12451 | 0.12451 | 0.0 | 0.33 Other | | 0.008828 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3155 ave 3155 max 3155 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59568 ave 59568 max 59568 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119136 ave 119136 max 119136 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119136 Ave neighs/atom = 59.568 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.453473860527, Press = -1.80288500248067 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -3164.1789 -3164.1789 -3228.6612 -3228.6612 249.55321 249.55321 42392.597 42392.597 460.84147 460.84147 11000 -3161.5591 -3161.5591 -3227.6857 -3227.6857 255.91654 255.91654 42686.784 42686.784 -317.64582 -317.64582 Loop time of 38.074 on 1 procs for 1000 steps with 2000 atoms Performance: 2.269 ns/day, 10.576 hours/ns, 26.265 timesteps/s 59.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.723 | 37.723 | 37.723 | 0.0 | 99.08 Neigh | 0.18568 | 0.18568 | 0.18568 | 0.0 | 0.49 Comm | 0.0469 | 0.0469 | 0.0469 | 0.0 | 0.12 Output | 2.5034e-05 | 2.5034e-05 | 2.5034e-05 | 0.0 | 0.00 Modify | 0.11019 | 0.11019 | 0.11019 | 0.0 | 0.29 Other | | 0.008653 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3148 ave 3148 max 3148 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59525 ave 59525 max 59525 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119050 ave 119050 max 119050 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119050 Ave neighs/atom = 59.525 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.577800618232, Press = 5.92590427875798 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -3161.5591 -3161.5591 -3227.6857 -3227.6857 255.91654 255.91654 42686.784 42686.784 -317.64582 -317.64582 12000 -3164.2421 -3164.2421 -3229.2028 -3229.2028 251.4044 251.4044 42597.351 42597.351 -117.80527 -117.80527 Loop time of 40.5315 on 1 procs for 1000 steps with 2000 atoms Performance: 2.132 ns/day, 11.259 hours/ns, 24.672 timesteps/s 55.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.174 | 40.174 | 40.174 | 0.0 | 99.12 Neigh | 0.18675 | 0.18675 | 0.18675 | 0.0 | 0.46 Comm | 0.021767 | 0.021767 | 0.021767 | 0.0 | 0.05 Output | 2.8849e-05 | 2.8849e-05 | 2.8849e-05 | 0.0 | 0.00 Modify | 0.14027 | 0.14027 | 0.14027 | 0.0 | 0.35 Other | | 0.008642 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3129 ave 3129 max 3129 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59497 ave 59497 max 59497 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 118994 ave 118994 max 118994 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 118994 Ave neighs/atom = 59.497 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.81651913553, Press = -0.166865302384735 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -3164.2421 -3164.2421 -3229.2028 -3229.2028 251.4044 251.4044 42597.351 42597.351 -117.80527 -117.80527 13000 -3161.7406 -3161.7406 -3228.8292 -3228.8292 259.6396 259.6396 42472.455 42472.455 222.91405 222.91405 Loop time of 42.1233 on 1 procs for 1000 steps with 2000 atoms Performance: 2.051 ns/day, 11.701 hours/ns, 23.740 timesteps/s 53.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.667 | 41.667 | 41.667 | 0.0 | 98.92 Neigh | 0.23685 | 0.23685 | 0.23685 | 0.0 | 0.56 Comm | 0.034773 | 0.034773 | 0.034773 | 0.0 | 0.08 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.17585 | 0.17585 | 0.17585 | 0.0 | 0.42 Other | | 0.009127 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3162 ave 3162 max 3162 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59677 ave 59677 max 59677 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119354 ave 119354 max 119354 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119354 Ave neighs/atom = 59.677 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.014387934069, Press = 3.5769585851038 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -3161.7406 -3161.7406 -3228.8292 -3228.8292 259.6396 259.6396 42472.455 42472.455 222.91405 222.91405 14000 -3163.9108 -3163.9108 -3230.3442 -3230.3442 257.10444 257.10444 42702.91 42702.91 -400.59263 -400.59263 Loop time of 42.232 on 1 procs for 1000 steps with 2000 atoms Performance: 2.046 ns/day, 11.731 hours/ns, 23.679 timesteps/s 53.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.843 | 41.843 | 41.843 | 0.0 | 99.08 Neigh | 0.19861 | 0.19861 | 0.19861 | 0.0 | 0.47 Comm | 0.051426 | 0.051426 | 0.051426 | 0.0 | 0.12 Output | 2.8849e-05 | 2.8849e-05 | 2.8849e-05 | 0.0 | 0.00 Modify | 0.13053 | 0.13053 | 0.13053 | 0.0 | 0.31 Other | | 0.008901 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3132 ave 3132 max 3132 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59465 ave 59465 max 59465 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 118930 ave 118930 max 118930 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 118930 Ave neighs/atom = 59.465 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.232338334567, Press = 0.268829015411499 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -3163.9108 -3163.9108 -3230.3442 -3230.3442 257.10444 257.10444 42702.91 42702.91 -400.59263 -400.59263 15000 -3164.0036 -3164.0036 -3229.5399 -3229.5399 253.63206 253.63206 42398.562 42398.562 446.19626 446.19626 Loop time of 42.3561 on 1 procs for 1000 steps with 2000 atoms Performance: 2.040 ns/day, 11.766 hours/ns, 23.609 timesteps/s 54.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 42.024 | 42.024 | 42.024 | 0.0 | 99.22 Neigh | 0.14554 | 0.14554 | 0.14554 | 0.0 | 0.34 Comm | 0.035024 | 0.035024 | 0.035024 | 0.0 | 0.08 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.116 | 0.116 | 0.116 | 0.0 | 0.27 Other | | 0.03506 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3134 ave 3134 max 3134 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59595 ave 59595 max 59595 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119190 ave 119190 max 119190 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119190 Ave neighs/atom = 59.595 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.250509345617, Press = 1.16606327398344 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -3164.0036 -3164.0036 -3229.5399 -3229.5399 253.63206 253.63206 42398.562 42398.562 446.19626 446.19626 16000 -3162.3017 -3162.3017 -3227.4738 -3227.4738 252.2227 252.2227 42698.948 42698.948 -342.97043 -342.97043 Loop time of 40.631 on 1 procs for 1000 steps with 2000 atoms Performance: 2.126 ns/day, 11.286 hours/ns, 24.612 timesteps/s 55.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.279 | 40.279 | 40.279 | 0.0 | 99.13 Neigh | 0.17852 | 0.17852 | 0.17852 | 0.0 | 0.44 Comm | 0.021819 | 0.021819 | 0.021819 | 0.0 | 0.05 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.12782 | 0.12782 | 0.12782 | 0.0 | 0.31 Other | | 0.02385 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3171 ave 3171 max 3171 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59525 ave 59525 max 59525 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119050 ave 119050 max 119050 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119050 Ave neighs/atom = 59.525 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.438876293703, Press = 3.01334885795359 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -3162.3017 -3162.3017 -3227.4738 -3227.4738 252.2227 252.2227 42698.948 42698.948 -342.97043 -342.97043 17000 -3163.9515 -3163.9515 -3229.1244 -3229.1244 252.22586 252.22586 42591.804 42591.804 -147.52513 -147.52513 Loop time of 39.1818 on 1 procs for 1000 steps with 2000 atoms Performance: 2.205 ns/day, 10.884 hours/ns, 25.522 timesteps/s 57.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.731 | 38.731 | 38.731 | 0.0 | 98.85 Neigh | 0.22161 | 0.22161 | 0.22161 | 0.0 | 0.57 Comm | 0.072817 | 0.072817 | 0.072817 | 0.0 | 0.19 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.13461 | 0.13461 | 0.13461 | 0.0 | 0.34 Other | | 0.0218 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3117 ave 3117 max 3117 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59533 ave 59533 max 59533 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119066 ave 119066 max 119066 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119066 Ave neighs/atom = 59.533 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.545518588182, Press = -4.27300422124419 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -3163.9515 -3163.9515 -3229.1244 -3229.1244 252.22586 252.22586 42591.804 42591.804 -147.52513 -147.52513 18000 -3162.2153 -3162.2153 -3226.5921 -3226.5921 249.14469 249.14469 42477.545 42477.545 296.94031 296.94031 Loop time of 43.21 on 1 procs for 1000 steps with 2000 atoms Performance: 2.000 ns/day, 12.003 hours/ns, 23.143 timesteps/s 52.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 42.802 | 42.802 | 42.802 | 0.0 | 99.06 Neigh | 0.16498 | 0.16498 | 0.16498 | 0.0 | 0.38 Comm | 0.042038 | 0.042038 | 0.042038 | 0.0 | 0.10 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.1918 | 0.1918 | 0.1918 | 0.0 | 0.44 Other | | 0.009157 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3155 ave 3155 max 3155 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59604 ave 59604 max 59604 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119208 ave 119208 max 119208 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119208 Ave neighs/atom = 59.604 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.429948494744, Press = 3.19885712757512 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -3162.2153 -3162.2153 -3226.5921 -3226.5921 249.14469 249.14469 42477.545 42477.545 296.94031 296.94031 19000 -3167.3155 -3167.3155 -3230.6333 -3230.6333 245.04643 245.04643 42636.096 42636.096 -376.41324 -376.41324 Loop time of 41.1286 on 1 procs for 1000 steps with 2000 atoms Performance: 2.101 ns/day, 11.425 hours/ns, 24.314 timesteps/s 54.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.773 | 40.773 | 40.773 | 0.0 | 99.14 Neigh | 0.18669 | 0.18669 | 0.18669 | 0.0 | 0.45 Comm | 0.047954 | 0.047954 | 0.047954 | 0.0 | 0.12 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.11201 | 0.11201 | 0.11201 | 0.0 | 0.27 Other | | 0.008886 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3101 ave 3101 max 3101 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59464 ave 59464 max 59464 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 118928 ave 118928 max 118928 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 118928 Ave neighs/atom = 59.464 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.318729274685, Press = 1.14612763468718 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -3167.3155 -3167.3155 -3230.6333 -3230.6333 245.04643 245.04643 42636.096 42636.096 -376.41324 -376.41324 20000 -3162.3521 -3162.3521 -3228.4512 -3228.4512 255.81046 255.81046 42549.658 42549.658 75.89492 75.89492 Loop time of 40.6305 on 1 procs for 1000 steps with 2000 atoms Performance: 2.126 ns/day, 11.286 hours/ns, 24.612 timesteps/s 55.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.215 | 40.215 | 40.215 | 0.0 | 98.98 Neigh | 0.15542 | 0.15542 | 0.15542 | 0.0 | 0.38 Comm | 0.049921 | 0.049921 | 0.049921 | 0.0 | 0.12 Output | 2.2173e-05 | 2.2173e-05 | 2.2173e-05 | 0.0 | 0.00 Modify | 0.17791 | 0.17791 | 0.17791 | 0.0 | 0.44 Other | | 0.03181 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3167 ave 3167 max 3167 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59596 ave 59596 max 59596 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119192 ave 119192 max 119192 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119192 Ave neighs/atom = 59.596 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.245423295642, Press = -0.354819111255152 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -3162.3521 -3162.3521 -3228.4512 -3228.4512 255.81046 255.81046 42549.658 42549.658 75.89492 75.89492 21000 -3163.6984 -3163.6984 -3228.2828 -3228.2828 249.94845 249.94845 42558.511 42558.511 -70.541917 -70.541917 Loop time of 38.7606 on 1 procs for 1000 steps with 2000 atoms Performance: 2.229 ns/day, 10.767 hours/ns, 25.799 timesteps/s 58.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.337 | 38.337 | 38.337 | 0.0 | 98.91 Neigh | 0.18394 | 0.18394 | 0.18394 | 0.0 | 0.47 Comm | 0.034699 | 0.034699 | 0.034699 | 0.0 | 0.09 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.18076 | 0.18076 | 0.18076 | 0.0 | 0.47 Other | | 0.02384 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3133 ave 3133 max 3133 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59554 ave 59554 max 59554 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119108 ave 119108 max 119108 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119108 Ave neighs/atom = 59.554 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.27206457639, Press = 1.41712130496302 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -3163.6984 -3163.6984 -3228.2828 -3228.2828 249.94845 249.94845 42558.511 42558.511 -70.541917 -70.541917 22000 -3163.7857 -3163.7857 -3230.0654 -3230.0654 256.50935 256.50935 42747.512 42747.512 -554.2968 -554.2968 Loop time of 37.7498 on 1 procs for 1000 steps with 2000 atoms Performance: 2.289 ns/day, 10.486 hours/ns, 26.490 timesteps/s 59.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.351 | 37.351 | 37.351 | 0.0 | 98.94 Neigh | 0.17894 | 0.17894 | 0.17894 | 0.0 | 0.47 Comm | 0.022936 | 0.022936 | 0.022936 | 0.0 | 0.06 Output | 2.3127e-05 | 2.3127e-05 | 2.3127e-05 | 0.0 | 0.00 Modify | 0.17424 | 0.17424 | 0.17424 | 0.0 | 0.46 Other | | 0.02272 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3154 ave 3154 max 3154 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59415 ave 59415 max 59415 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 118830 ave 118830 max 118830 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 118830 Ave neighs/atom = 59.415 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.266282729916, Press = -0.773562452300966 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -3163.7857 -3163.7857 -3230.0654 -3230.0654 256.50935 256.50935 42747.512 42747.512 -554.2968 -554.2968 23000 -3164.8064 -3164.8064 -3231.4 -3231.4 257.72417 257.72417 42224.323 42224.323 887.15471 887.15471 Loop time of 40.7594 on 1 procs for 1000 steps with 2000 atoms Performance: 2.120 ns/day, 11.322 hours/ns, 24.534 timesteps/s 55.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.286 | 40.286 | 40.286 | 0.0 | 98.84 Neigh | 0.21422 | 0.21422 | 0.21422 | 0.0 | 0.53 Comm | 0.04784 | 0.04784 | 0.04784 | 0.0 | 0.12 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.2027 | 0.2027 | 0.2027 | 0.0 | 0.50 Other | | 0.008755 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3151 ave 3151 max 3151 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59649 ave 59649 max 59649 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119298 ave 119298 max 119298 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119298 Ave neighs/atom = 59.649 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.332005895446, Press = 1.19529398223194 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -3164.8064 -3164.8064 -3231.4 -3231.4 257.72417 257.72417 42224.323 42224.323 887.15471 887.15471 24000 -3164.2801 -3164.2801 -3231.1051 -3231.1051 258.6197 258.6197 42634.084 42634.084 -319.64668 -319.64668 Loop time of 42.4104 on 1 procs for 1000 steps with 2000 atoms Performance: 2.037 ns/day, 11.781 hours/ns, 23.579 timesteps/s 53.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 42.027 | 42.027 | 42.027 | 0.0 | 99.10 Neigh | 0.2176 | 0.2176 | 0.2176 | 0.0 | 0.51 Comm | 0.034931 | 0.034931 | 0.034931 | 0.0 | 0.08 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.10646 | 0.10646 | 0.10646 | 0.0 | 0.25 Other | | 0.02466 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3203 ave 3203 max 3203 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59531 ave 59531 max 59531 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119062 ave 119062 max 119062 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119062 Ave neighs/atom = 59.531 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.383964730416, Press = 1.50559789481146 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -3164.2801 -3164.2801 -3231.1051 -3231.1051 258.6197 258.6197 42634.084 42634.084 -319.64668 -319.64668 25000 -3166.7788 -3166.7788 -3230.632 -3230.632 247.11848 247.11848 42470.261 42470.261 158.89437 158.89437 Loop time of 40.3273 on 1 procs for 1000 steps with 2000 atoms Performance: 2.142 ns/day, 11.202 hours/ns, 24.797 timesteps/s 56.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.964 | 39.964 | 39.964 | 0.0 | 99.10 Neigh | 0.17407 | 0.17407 | 0.17407 | 0.0 | 0.43 Comm | 0.0217 | 0.0217 | 0.0217 | 0.0 | 0.05 Output | 2.2173e-05 | 2.2173e-05 | 2.2173e-05 | 0.0 | 0.00 Modify | 0.15902 | 0.15902 | 0.15902 | 0.0 | 0.39 Other | | 0.008911 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3114 ave 3114 max 3114 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59554 ave 59554 max 59554 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119108 ave 119108 max 119108 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119108 Ave neighs/atom = 59.554 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.271338487497, Press = -0.52519546146595 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -3166.7788 -3166.7788 -3230.632 -3230.632 247.11848 247.11848 42470.261 42470.261 158.89437 158.89437 26000 -3163.2001 -3163.2001 -3227.9513 -3227.9513 250.59402 250.59402 42579.141 42579.141 -43.140935 -43.140935 Loop time of 41.8237 on 1 procs for 1000 steps with 2000 atoms Performance: 2.066 ns/day, 11.618 hours/ns, 23.910 timesteps/s 53.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.363 | 41.363 | 41.363 | 0.0 | 98.90 Neigh | 0.24415 | 0.24415 | 0.24415 | 0.0 | 0.58 Comm | 0.049727 | 0.049727 | 0.049727 | 0.0 | 0.12 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.15783 | 0.15783 | 0.15783 | 0.0 | 0.38 Other | | 0.009208 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3138 ave 3138 max 3138 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59516 ave 59516 max 59516 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119032 ave 119032 max 119032 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119032 Ave neighs/atom = 59.516 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.267809575973, Press = 1.117286150345 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 26000 -3163.2001 -3163.2001 -3227.9513 -3227.9513 250.59402 250.59402 42579.141 42579.141 -43.140935 -43.140935 27000 -3165.6691 -3165.6691 -3232.6277 -3232.6277 259.13648 259.13648 42527.559 42527.559 -102.84154 -102.84154 Loop time of 39.5723 on 1 procs for 1000 steps with 2000 atoms Performance: 2.183 ns/day, 10.992 hours/ns, 25.270 timesteps/s 57.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.217 | 39.217 | 39.217 | 0.0 | 99.10 Neigh | 0.16305 | 0.16305 | 0.16305 | 0.0 | 0.41 Comm | 0.036238 | 0.036238 | 0.036238 | 0.0 | 0.09 Output | 1.9073e-05 | 1.9073e-05 | 1.9073e-05 | 0.0 | 0.00 Modify | 0.14737 | 0.14737 | 0.14737 | 0.0 | 0.37 Other | | 0.008853 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3135 ave 3135 max 3135 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59598 ave 59598 max 59598 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119196 ave 119196 max 119196 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119196 Ave neighs/atom = 59.598 Neighbor list builds = 20 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T253.15.out" else "print 'not_converged' file output/vol_T253.15.out" print '${V}' file output/vol_T253.15.out 42551.4224041833 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0