# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.4522535204887386*${_u_distance} variable latticeconst_converted equal 3.4522535204887386*1 lattice bcc ${latticeconst_converted} lattice bcc 3.45225352048874 Lattice spacing in x,y,z = 3.45225 3.45225 3.45225 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (34.5225 34.5225 34.5225) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 2000 atoms create_atoms CPU = 0.000310898 secs variable mass_converted equal 6.941*${_u_mass} variable mass_converted equal 6.941*1 kim_interactions Li #=== BEGIN kim_interactions ================================== pair_style meam/c pair_coeff * * /tmp/kim-simulator-model-parameter-file-directory-XXXXXXJD4bxi/library.meam Li Si /tmp/kim-simulator-model-parameter-file-directory-XXXXXXJD4bxi/LiSi.meam Li #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 6.941 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 41144.1451552659 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 41144.1451552659/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 41144.1451552659/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 41144.1451552659/(1*1*${_u_distance}) variable V0_metal equal 41144.1451552659/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 41144.1451552659*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 41144.1451552659 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 273.15*${_u_temperature} variable temp_converted equal 273.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 273.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "273.15 - 0.2" variable T_up equal "273.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 11 11 11 2 neighbor lists, perpetual/occasional/extra = 2 0 0 (1) pair meam/c, perpetual attributes: full, newton on pair build: full/bin/atomonly stencil: full/bin/3d bin: standard (2) pair meam/c, perpetual, half/full from (1) attributes: half, newton on pair build: halffull/newton stencil: none bin: none Per MPI rank memory allocation (min/avg/max) = 10.94 | 10.94 | 10.94 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -3224.0166 -3224.0166 -3294.5961 -3294.5961 273.15 273.15 41144.145 41144.145 1832.2678 1832.2678 1000 -3152.5889 -3152.5889 -3221.9841 -3221.9841 268.56659 268.56659 42786.828 42786.828 -225.27801 -225.27801 Loop time of 52.1071 on 1 procs for 1000 steps with 2000 atoms Performance: 1.658 ns/day, 14.474 hours/ns, 19.191 timesteps/s 42.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 51.661 | 51.661 | 51.661 | 0.0 | 99.14 Neigh | 0.2474 | 0.2474 | 0.2474 | 0.0 | 0.47 Comm | 0.052038 | 0.052038 | 0.052038 | 0.0 | 0.10 Output | 3.8862e-05 | 3.8862e-05 | 3.8862e-05 | 0.0 | 0.00 Modify | 0.1379 | 0.1379 | 0.1379 | 0.0 | 0.26 Other | | 0.008703 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3140 ave 3140 max 3140 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59563 ave 59563 max 59563 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119126 ave 119126 max 119126 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119126 Ave neighs/atom = 59.563 Neighbor list builds = 19 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -3152.5889 -3152.5889 -3221.9841 -3221.9841 268.56659 268.56659 42786.828 42786.828 -225.27801 -225.27801 2000 -3154.6156 -3154.6156 -3225.319 -3225.319 273.62912 273.62912 42728.302 42728.302 -172.15833 -172.15833 Loop time of 51.6892 on 1 procs for 1000 steps with 2000 atoms Performance: 1.672 ns/day, 14.358 hours/ns, 19.346 timesteps/s 44.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 51.246 | 51.246 | 51.246 | 0.0 | 99.14 Neigh | 0.24005 | 0.24005 | 0.24005 | 0.0 | 0.46 Comm | 0.053608 | 0.053608 | 0.053608 | 0.0 | 0.10 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.14079 | 0.14079 | 0.14079 | 0.0 | 0.27 Other | | 0.008795 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3150 ave 3150 max 3150 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59549 ave 59549 max 59549 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119098 ave 119098 max 119098 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119098 Ave neighs/atom = 59.549 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -3154.6156 -3154.6156 -3225.319 -3225.319 273.62912 273.62912 42728.302 42728.302 -172.15833 -172.15833 3000 -3152.108 -3152.108 -3223.5489 -3223.5489 276.48355 276.48355 42622.447 42622.447 237.09871 237.09871 Loop time of 51.1898 on 1 procs for 1000 steps with 2000 atoms Performance: 1.688 ns/day, 14.219 hours/ns, 19.535 timesteps/s 44.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 50.544 | 50.544 | 50.544 | 0.0 | 98.74 Neigh | 0.31741 | 0.31741 | 0.31741 | 0.0 | 0.62 Comm | 0.073041 | 0.073041 | 0.073041 | 0.0 | 0.14 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.22827 | 0.22827 | 0.22827 | 0.0 | 0.45 Other | | 0.0268 | | | 0.05 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3150 ave 3150 max 3150 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59580 ave 59580 max 59580 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119160 ave 119160 max 119160 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119160 Ave neighs/atom = 59.58 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -3152.108 -3152.108 -3223.5489 -3223.5489 276.48355 276.48355 42622.447 42622.447 237.09871 237.09871 4000 -3153.2406 -3153.2406 -3224.9126 -3224.9126 277.3784 277.3784 42736.233 42736.233 -82.388191 -82.388191 Loop time of 48.2056 on 1 procs for 1000 steps with 2000 atoms Performance: 1.792 ns/day, 13.390 hours/ns, 20.744 timesteps/s 47.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.732 | 47.732 | 47.732 | 0.0 | 99.02 Neigh | 0.27394 | 0.27394 | 0.27394 | 0.0 | 0.57 Comm | 0.031781 | 0.031781 | 0.031781 | 0.0 | 0.07 Output | 4.0054e-05 | 4.0054e-05 | 4.0054e-05 | 0.0 | 0.00 Modify | 0.15877 | 0.15877 | 0.15877 | 0.0 | 0.33 Other | | 0.00887 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3142 ave 3142 max 3142 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59547 ave 59547 max 59547 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119094 ave 119094 max 119094 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119094 Ave neighs/atom = 59.547 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -3153.2406 -3153.2406 -3224.9126 -3224.9126 277.3784 277.3784 42736.233 42736.233 -82.388191 -82.388191 5000 -3153.4451 -3153.4451 -3224.3784 -3224.3784 274.51927 274.51927 42830.242 42830.242 -459.33227 -459.33227 Loop time of 49.547 on 1 procs for 1000 steps with 2000 atoms Performance: 1.744 ns/day, 13.763 hours/ns, 20.183 timesteps/s 46.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.983 | 48.983 | 48.983 | 0.0 | 98.86 Neigh | 0.30203 | 0.30203 | 0.30203 | 0.0 | 0.61 Comm | 0.022199 | 0.022199 | 0.022199 | 0.0 | 0.04 Output | 4.0054e-05 | 4.0054e-05 | 4.0054e-05 | 0.0 | 0.00 Modify | 0.19819 | 0.19819 | 0.19819 | 0.0 | 0.40 Other | | 0.04182 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3112 ave 3112 max 3112 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59512 ave 59512 max 59512 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119024 ave 119024 max 119024 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119024 Ave neighs/atom = 59.512 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 274.213715408826, Press = -435.06168612421 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -3153.4451 -3153.4451 -3224.3784 -3224.3784 274.51927 274.51927 42830.242 42830.242 -459.33227 -459.33227 6000 -3151.2318 -3151.2318 -3222.3633 -3222.3633 275.28628 275.28628 42724.211 42724.211 -45.886918 -45.886918 Loop time of 51.2704 on 1 procs for 1000 steps with 2000 atoms Performance: 1.685 ns/day, 14.242 hours/ns, 19.504 timesteps/s 44.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 50.715 | 50.715 | 50.715 | 0.0 | 98.92 Neigh | 0.28984 | 0.28984 | 0.28984 | 0.0 | 0.57 Comm | 0.039266 | 0.039266 | 0.039266 | 0.0 | 0.08 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.21759 | 0.21759 | 0.21759 | 0.0 | 0.42 Other | | 0.008992 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3144 ave 3144 max 3144 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59543 ave 59543 max 59543 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119086 ave 119086 max 119086 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119086 Ave neighs/atom = 59.543 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.817325798128, Press = -49.0003412320269 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -3151.2318 -3151.2318 -3222.3633 -3222.3633 275.28628 275.28628 42724.211 42724.211 -45.886918 -45.886918 7000 -3155.3749 -3155.3749 -3225.3548 -3225.3548 270.82961 270.82961 42533.691 42533.691 304.18401 304.18401 Loop time of 48.7045 on 1 procs for 1000 steps with 2000 atoms Performance: 1.774 ns/day, 13.529 hours/ns, 20.532 timesteps/s 46.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.162 | 48.162 | 48.162 | 0.0 | 98.89 Neigh | 0.26637 | 0.26637 | 0.26637 | 0.0 | 0.55 Comm | 0.037985 | 0.037985 | 0.037985 | 0.0 | 0.08 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.21154 | 0.21154 | 0.21154 | 0.0 | 0.43 Other | | 0.02666 | | | 0.05 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3154 ave 3154 max 3154 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59632 ave 59632 max 59632 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119264 ave 119264 max 119264 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119264 Ave neighs/atom = 59.632 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.047339383077, Press = -4.42686900912149 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -3155.3749 -3155.3749 -3225.3548 -3225.3548 270.82961 270.82961 42533.691 42533.691 304.18401 304.18401 8000 -3151.6133 -3151.6133 -3223.1989 -3223.1989 277.0437 277.0437 42825.041 42825.041 -345.99551 -345.99551 Loop time of 46.15 on 1 procs for 1000 steps with 2000 atoms Performance: 1.872 ns/day, 12.819 hours/ns, 21.668 timesteps/s 49.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 45.701 | 45.701 | 45.701 | 0.0 | 99.03 Neigh | 0.257 | 0.257 | 0.257 | 0.0 | 0.56 Comm | 0.024831 | 0.024831 | 0.024831 | 0.0 | 0.05 Output | 3.0041e-05 | 3.0041e-05 | 3.0041e-05 | 0.0 | 0.00 Modify | 0.14561 | 0.14561 | 0.14561 | 0.0 | 0.32 Other | | 0.02108 | | | 0.05 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3150 ave 3150 max 3150 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59508 ave 59508 max 59508 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119016 ave 119016 max 119016 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119016 Ave neighs/atom = 59.508 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.664176278571, Press = -3.97120632881744 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -3151.6133 -3151.6133 -3223.1989 -3223.1989 277.0437 277.0437 42825.041 42825.041 -345.99551 -345.99551 9000 -3154.957 -3154.957 -3226.7057 -3226.7057 277.67485 277.67485 42777.025 42777.025 -349.06979 -349.06979 Loop time of 39.7309 on 1 procs for 1000 steps with 2000 atoms Performance: 2.175 ns/day, 11.036 hours/ns, 25.169 timesteps/s 57.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.351 | 39.351 | 39.351 | 0.0 | 99.04 Neigh | 0.16262 | 0.16262 | 0.16262 | 0.0 | 0.41 Comm | 0.022055 | 0.022055 | 0.022055 | 0.0 | 0.06 Output | 2.8849e-05 | 2.8849e-05 | 2.8849e-05 | 0.0 | 0.00 Modify | 0.18614 | 0.18614 | 0.18614 | 0.0 | 0.47 Other | | 0.008778 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3105 ave 3105 max 3105 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59482 ave 59482 max 59482 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 118964 ave 118964 max 118964 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 118964 Ave neighs/atom = 59.482 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.699864630213, Press = -9.61075970556588 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -3154.957 -3154.957 -3226.7057 -3226.7057 277.67485 277.67485 42777.025 42777.025 -349.06979 -349.06979 10000 -3150.4809 -3150.4809 -3222.3307 -3222.3307 278.06618 278.06618 42682.701 42682.701 106.9037 106.9037 Loop time of 40.7253 on 1 procs for 1000 steps with 2000 atoms Performance: 2.122 ns/day, 11.313 hours/ns, 24.555 timesteps/s 55.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.357 | 40.357 | 40.357 | 0.0 | 99.09 Neigh | 0.18997 | 0.18997 | 0.18997 | 0.0 | 0.47 Comm | 0.022088 | 0.022088 | 0.022088 | 0.0 | 0.05 Output | 2.1935e-05 | 2.1935e-05 | 2.1935e-05 | 0.0 | 0.00 Modify | 0.14758 | 0.14758 | 0.14758 | 0.0 | 0.36 Other | | 0.008995 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3154 ave 3154 max 3154 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59566 ave 59566 max 59566 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119132 ave 119132 max 119132 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119132 Ave neighs/atom = 59.566 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.859691651149, Press = -8.92281289216492 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -3150.4809 -3150.4809 -3222.3307 -3222.3307 278.06618 278.06618 42682.701 42682.701 106.9037 106.9037 11000 -3152.4956 -3152.4956 -3224.1586 -3224.1586 277.34309 277.34309 42559.827 42559.827 397.74298 397.74298 Loop time of 39.868 on 1 procs for 1000 steps with 2000 atoms Performance: 2.167 ns/day, 11.074 hours/ns, 25.083 timesteps/s 56.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.494 | 39.494 | 39.494 | 0.0 | 99.06 Neigh | 0.18794 | 0.18794 | 0.18794 | 0.0 | 0.47 Comm | 0.035135 | 0.035135 | 0.035135 | 0.0 | 0.09 Output | 2.5034e-05 | 2.5034e-05 | 2.5034e-05 | 0.0 | 0.00 Modify | 0.1425 | 0.1425 | 0.1425 | 0.0 | 0.36 Other | | 0.008673 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3138 ave 3138 max 3138 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59628 ave 59628 max 59628 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119256 ave 119256 max 119256 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119256 Ave neighs/atom = 59.628 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.971406521901, Press = 3.31561222937181 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -3152.4956 -3152.4956 -3224.1586 -3224.1586 277.34309 277.34309 42559.827 42559.827 397.74298 397.74298 12000 -3154.743 -3154.743 -3223.5 -3223.5 266.09668 266.09668 42792.181 42792.181 -342.77202 -342.77202 Loop time of 39.0433 on 1 procs for 1000 steps with 2000 atoms Performance: 2.213 ns/day, 10.845 hours/ns, 25.613 timesteps/s 58.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.668 | 38.668 | 38.668 | 0.0 | 99.04 Neigh | 0.18265 | 0.18265 | 0.18265 | 0.0 | 0.47 Comm | 0.045059 | 0.045059 | 0.045059 | 0.0 | 0.12 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.13837 | 0.13837 | 0.13837 | 0.0 | 0.35 Other | | 0.008819 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3138 ave 3138 max 3138 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59542 ave 59542 max 59542 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119084 ave 119084 max 119084 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119084 Ave neighs/atom = 59.542 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.279853379432, Press = -0.673940051488885 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -3154.743 -3154.743 -3223.5 -3223.5 266.09668 266.09668 42792.181 42792.181 -342.77202 -342.77202 13000 -3151.2537 -3151.2537 -3222.4157 -3222.4157 275.40445 275.40445 42732.187 42732.187 10.939793 10.939793 Loop time of 37.4919 on 1 procs for 1000 steps with 2000 atoms Performance: 2.304 ns/day, 10.414 hours/ns, 26.672 timesteps/s 60.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.029 | 37.029 | 37.029 | 0.0 | 98.77 Neigh | 0.1645 | 0.1645 | 0.1645 | 0.0 | 0.44 Comm | 0.060966 | 0.060966 | 0.060966 | 0.0 | 0.16 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.22851 | 0.22851 | 0.22851 | 0.0 | 0.61 Other | | 0.008787 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3168 ave 3168 max 3168 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59567 ave 59567 max 59567 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119134 ave 119134 max 119134 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119134 Ave neighs/atom = 59.567 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.16644496691, Press = -5.94654397518101 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -3151.2537 -3151.2537 -3222.4157 -3222.4157 275.40445 275.40445 42732.187 42732.187 10.939793 10.939793 14000 -3154.1412 -3154.1412 -3222.2488 -3222.2488 263.58345 263.58345 42673.087 42673.087 41.613956 41.613956 Loop time of 37.6724 on 1 procs for 1000 steps with 2000 atoms Performance: 2.293 ns/day, 10.465 hours/ns, 26.545 timesteps/s 60.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.311 | 37.311 | 37.311 | 0.0 | 99.04 Neigh | 0.20368 | 0.20368 | 0.20368 | 0.0 | 0.54 Comm | 0.037496 | 0.037496 | 0.037496 | 0.0 | 0.10 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.11184 | 0.11184 | 0.11184 | 0.0 | 0.30 Other | | 0.008796 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3104 ave 3104 max 3104 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59546 ave 59546 max 59546 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119092 ave 119092 max 119092 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119092 Ave neighs/atom = 59.546 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.94234778421, Press = -1.01320800490013 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -3154.1412 -3154.1412 -3222.2488 -3222.2488 263.58345 263.58345 42673.087 42673.087 41.613956 41.613956 15000 -3150.1133 -3150.1133 -3222.0714 -3222.0714 278.48512 278.48512 42849.867 42849.867 -307.00334 -307.00334 Loop time of 39.0063 on 1 procs for 1000 steps with 2000 atoms Performance: 2.215 ns/day, 10.835 hours/ns, 25.637 timesteps/s 57.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.65 | 38.65 | 38.65 | 0.0 | 99.09 Neigh | 0.20109 | 0.20109 | 0.20109 | 0.0 | 0.52 Comm | 0.021813 | 0.021813 | 0.021813 | 0.0 | 0.06 Output | 2.8849e-05 | 2.8849e-05 | 2.8849e-05 | 0.0 | 0.00 Modify | 0.1244 | 0.1244 | 0.1244 | 0.0 | 0.32 Other | | 0.00859 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3141 ave 3141 max 3141 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59518 ave 59518 max 59518 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119036 ave 119036 max 119036 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119036 Ave neighs/atom = 59.518 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.081890763227, Press = -1.75482829892564 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -3150.1133 -3150.1133 -3222.0714 -3222.0714 278.48512 278.48512 42849.867 42849.867 -307.00334 -307.00334 16000 -3154.0183 -3154.0183 -3224.9313 -3224.9313 274.44037 274.44037 42587.066 42587.066 219.65696 219.65696 Loop time of 38.8312 on 1 procs for 1000 steps with 2000 atoms Performance: 2.225 ns/day, 10.786 hours/ns, 25.753 timesteps/s 59.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.459 | 38.459 | 38.459 | 0.0 | 99.04 Neigh | 0.18989 | 0.18989 | 0.18989 | 0.0 | 0.49 Comm | 0.048832 | 0.048832 | 0.048832 | 0.0 | 0.13 Output | 2.0981e-05 | 2.0981e-05 | 2.0981e-05 | 0.0 | 0.00 Modify | 0.11166 | 0.11166 | 0.11166 | 0.0 | 0.29 Other | | 0.02182 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3155 ave 3155 max 3155 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59568 ave 59568 max 59568 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119136 ave 119136 max 119136 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119136 Ave neighs/atom = 59.568 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.164555756521, Press = -3.22623021184088 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -3154.0183 -3154.0183 -3224.9313 -3224.9313 274.44037 274.44037 42587.066 42587.066 219.65696 219.65696 17000 -3153.1998 -3153.1998 -3225.2863 -3225.2863 278.98234 278.98234 42525.84 42525.84 413.0564 413.0564 Loop time of 38.6345 on 1 procs for 1000 steps with 2000 atoms Performance: 2.236 ns/day, 10.732 hours/ns, 25.884 timesteps/s 58.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.227 | 38.227 | 38.227 | 0.0 | 98.95 Neigh | 0.17836 | 0.17836 | 0.17836 | 0.0 | 0.46 Comm | 0.060196 | 0.060196 | 0.060196 | 0.0 | 0.16 Output | 2.1935e-05 | 2.1935e-05 | 2.1935e-05 | 0.0 | 0.00 Modify | 0.14693 | 0.14693 | 0.14693 | 0.0 | 0.38 Other | | 0.02182 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3168 ave 3168 max 3168 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59648 ave 59648 max 59648 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119296 ave 119296 max 119296 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119296 Ave neighs/atom = 59.648 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.191241770245, Press = -0.770208131193114 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -3153.1998 -3153.1998 -3225.2863 -3225.2863 278.98234 278.98234 42525.84 42525.84 413.0564 413.0564 18000 -3151.0143 -3151.0143 -3221.2086 -3221.2086 271.65922 271.65922 43007.419 43007.419 -752.63336 -752.63336 Loop time of 41.4385 on 1 procs for 1000 steps with 2000 atoms Performance: 2.085 ns/day, 11.511 hours/ns, 24.132 timesteps/s 54.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.038 | 41.038 | 41.038 | 0.0 | 99.03 Neigh | 0.17599 | 0.17599 | 0.17599 | 0.0 | 0.42 Comm | 0.044349 | 0.044349 | 0.044349 | 0.0 | 0.11 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.1579 | 0.1579 | 0.1579 | 0.0 | 0.38 Other | | 0.02185 | | | 0.05 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3113 ave 3113 max 3113 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59444 ave 59444 max 59444 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 118888 ave 118888 max 118888 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 118888 Ave neighs/atom = 59.444 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.27773595109, Press = -0.439745633135963 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -3151.0143 -3151.0143 -3221.2086 -3221.2086 271.65922 271.65922 43007.419 43007.419 -752.63336 -752.63336 19000 -3153.8505 -3153.8505 -3223.6768 -3223.6768 270.235 270.235 42781.366 42781.366 -225.75641 -225.75641 Loop time of 40.0218 on 1 procs for 1000 steps with 2000 atoms Performance: 2.159 ns/day, 11.117 hours/ns, 24.986 timesteps/s 56.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.574 | 39.574 | 39.574 | 0.0 | 98.88 Neigh | 0.23119 | 0.23119 | 0.23119 | 0.0 | 0.58 Comm | 0.036137 | 0.036137 | 0.036137 | 0.0 | 0.09 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.15872 | 0.15872 | 0.15872 | 0.0 | 0.40 Other | | 0.02168 | | | 0.05 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3126 ave 3126 max 3126 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59489 ave 59489 max 59489 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 118978 ave 118978 max 118978 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 118978 Ave neighs/atom = 59.489 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.181163448079, Press = -3.90015942343266 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -3153.8505 -3153.8505 -3223.6768 -3223.6768 270.235 270.235 42781.366 42781.366 -225.75641 -225.75641 20000 -3152.4702 -3152.4702 -3224.4164 -3224.4164 278.43925 278.43925 42697.981 42697.981 -27.028834 -27.028834 Loop time of 36.9294 on 1 procs for 1000 steps with 2000 atoms Performance: 2.340 ns/day, 10.258 hours/ns, 27.079 timesteps/s 61.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 36.531 | 36.531 | 36.531 | 0.0 | 98.92 Neigh | 0.23473 | 0.23473 | 0.23473 | 0.0 | 0.64 Comm | 0.022033 | 0.022033 | 0.022033 | 0.0 | 0.06 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.13263 | 0.13263 | 0.13263 | 0.0 | 0.36 Other | | 0.008853 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3151 ave 3151 max 3151 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59565 ave 59565 max 59565 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119130 ave 119130 max 119130 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119130 Ave neighs/atom = 59.565 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.210273050379, Press = -2.8038697855215 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -3152.4702 -3152.4702 -3224.4164 -3224.4164 278.43925 278.43925 42697.981 42697.981 -27.028834 -27.028834 21000 -3151.4168 -3151.4168 -3220.8691 -3220.8691 268.78754 268.78754 42706.857 42706.857 98.783728 98.783728 Loop time of 40.0959 on 1 procs for 1000 steps with 2000 atoms Performance: 2.155 ns/day, 11.138 hours/ns, 24.940 timesteps/s 56.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.729 | 39.729 | 39.729 | 0.0 | 99.09 Neigh | 0.17129 | 0.17129 | 0.17129 | 0.0 | 0.43 Comm | 0.061513 | 0.061513 | 0.061513 | 0.0 | 0.15 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.1251 | 0.1251 | 0.1251 | 0.0 | 0.31 Other | | 0.008737 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3145 ave 3145 max 3145 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59599 ave 59599 max 59599 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119198 ave 119198 max 119198 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119198 Ave neighs/atom = 59.599 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.198872590099, Press = -1.05331655126162 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -3151.4168 -3151.4168 -3220.8691 -3220.8691 268.78754 268.78754 42706.857 42706.857 98.783728 98.783728 22000 -3153.1997 -3153.1997 -3224.4864 -3224.4864 275.8869 275.8869 42665.292 42665.292 52.716759 52.716759 Loop time of 42.3441 on 1 procs for 1000 steps with 2000 atoms Performance: 2.040 ns/day, 11.762 hours/ns, 23.616 timesteps/s 53.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.932 | 41.932 | 41.932 | 0.0 | 99.03 Neigh | 0.22195 | 0.22195 | 0.22195 | 0.0 | 0.52 Comm | 0.050216 | 0.050216 | 0.050216 | 0.0 | 0.12 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.09827 | 0.09827 | 0.09827 | 0.0 | 0.23 Other | | 0.0416 | | | 0.10 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3158 ave 3158 max 3158 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59618 ave 59618 max 59618 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119236 ave 119236 max 119236 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119236 Ave neighs/atom = 59.618 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.312834559389, Press = -0.870584695290875 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -3153.1997 -3153.1997 -3224.4864 -3224.4864 275.8869 275.8869 42665.292 42665.292 52.716759 52.716759 23000 -3154.4672 -3154.4672 -3224.1132 -3224.1132 269.53711 269.53711 42733.32 42733.32 -130.79552 -130.79552 Loop time of 42.1345 on 1 procs for 1000 steps with 2000 atoms Performance: 2.051 ns/day, 11.704 hours/ns, 23.734 timesteps/s 53.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.772 | 41.772 | 41.772 | 0.0 | 99.14 Neigh | 0.17984 | 0.17984 | 0.17984 | 0.0 | 0.43 Comm | 0.049427 | 0.049427 | 0.049427 | 0.0 | 0.12 Output | 3.0041e-05 | 3.0041e-05 | 3.0041e-05 | 0.0 | 0.00 Modify | 0.12429 | 0.12429 | 0.12429 | 0.0 | 0.29 Other | | 0.00865 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3148 ave 3148 max 3148 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59557 ave 59557 max 59557 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119114 ave 119114 max 119114 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119114 Ave neighs/atom = 59.557 Neighbor list builds = 21 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.235068970534, Press = 0.529296197819504 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -3154.4672 -3154.4672 -3224.1132 -3224.1132 269.53711 269.53711 42733.32 42733.32 -130.79552 -130.79552 24000 -3153.525 -3153.525 -3223.2138 -3223.2138 269.70268 269.70268 42787.512 42787.512 -249.06525 -249.06525 Loop time of 41.3186 on 1 procs for 1000 steps with 2000 atoms Performance: 2.091 ns/day, 11.477 hours/ns, 24.202 timesteps/s 55.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.854 | 40.854 | 40.854 | 0.0 | 98.87 Neigh | 0.27869 | 0.27869 | 0.27869 | 0.0 | 0.67 Comm | 0.022611 | 0.022611 | 0.022611 | 0.0 | 0.05 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.1547 | 0.1547 | 0.1547 | 0.0 | 0.37 Other | | 0.008924 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3126 ave 3126 max 3126 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59494 ave 59494 max 59494 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 118988 ave 118988 max 118988 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 118988 Ave neighs/atom = 59.494 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.309782499919, Press = -2.69665726922791 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -3153.525 -3153.525 -3223.2138 -3223.2138 269.70268 269.70268 42787.512 42787.512 -249.06525 -249.06525 25000 -3151.5909 -3151.5909 -3223.8334 -3223.8334 279.58626 279.58626 42655.801 42655.801 114.12721 114.12721 Loop time of 38.5817 on 1 procs for 1000 steps with 2000 atoms Performance: 2.239 ns/day, 10.717 hours/ns, 25.919 timesteps/s 58.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.228 | 38.228 | 38.228 | 0.0 | 99.08 Neigh | 0.18122 | 0.18122 | 0.18122 | 0.0 | 0.47 Comm | 0.034653 | 0.034653 | 0.034653 | 0.0 | 0.09 Output | 2.5034e-05 | 2.5034e-05 | 2.5034e-05 | 0.0 | 0.00 Modify | 0.10728 | 0.10728 | 0.10728 | 0.0 | 0.28 Other | | 0.03068 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3157 ave 3157 max 3157 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59542 ave 59542 max 59542 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119084 ave 119084 max 119084 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119084 Ave neighs/atom = 59.542 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.312347571954, Press = -2.60725835863328 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.99 | 10.99 | 10.99 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -3151.5909 -3151.5909 -3223.8334 -3223.8334 279.58626 279.58626 42655.801 42655.801 114.12721 114.12721 26000 -3154.9674 -3154.9674 -3225.0805 -3225.0805 271.34459 271.34459 42400.809 42400.809 739.90746 739.90746 Loop time of 38.5896 on 1 procs for 1000 steps with 2000 atoms Performance: 2.239 ns/day, 10.719 hours/ns, 25.914 timesteps/s 58.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.13 | 38.13 | 38.13 | 0.0 | 98.81 Neigh | 0.2436 | 0.2436 | 0.2436 | 0.0 | 0.63 Comm | 0.030956 | 0.030956 | 0.030956 | 0.0 | 0.08 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.16362 | 0.16362 | 0.16362 | 0.0 | 0.42 Other | | 0.02166 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 3152 ave 3152 max 3152 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 59637 ave 59637 max 59637 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 119274 ave 119274 max 119274 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 119274 Ave neighs/atom = 59.637 Neighbor list builds = 22 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T273.15.out" else "print 'not_converged' file output/vol_T273.15.out" print '${V}' file output/vol_T273.15.out 42696.2617247542 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0