# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.050199627876282*${_u_distance} variable latticeconst_converted equal 4.050199627876282*1 lattice fcc ${latticeconst_converted} lattice fcc 4.05019962787628 Lattice spacing in x,y,z = 4.0502 4.0502 4.0502 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (40.502 40.502 40.502) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000339985 secs variable mass_converted equal 26.981538*${_u_mass} variable mass_converted equal 26.981538*1 # specify which KIM Model to use pair_style kim EAM_Dynamo_ZhouWadleyJohnson_2001NISTretabulation_Al__MO_060567868558_000 pair_coeff * * Al mass 1 ${mass_converted} mass 1 26.981538 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 66439.9486729232 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 66439.9486729232/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 66439.9486729232/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 66439.9486729232/(1*1*${_u_distance}) variable V0_metal equal 66439.9486729232/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 66439.9486729232*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 66439.9486729232 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 253.15*${_u_temperature} variable temp_converted equal 253.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 253.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "253.15 - 0.2" variable T_up equal "253.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8.40393 ghost atom cutoff = 8.40393 binsize = 4.20196, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8.40393 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -14189.153 -14189.153 -14320.009 -14320.009 253.15 253.15 66439.949 66439.949 2103.657 2103.657 1000 -14024.693 -14024.693 -14159.96 -14159.96 261.68309 261.68309 69565.737 69565.737 -1492.3911 -1492.3911 Loop time of 25.1644 on 1 procs for 1000 steps with 4000 atoms Performance: 3.433 ns/day, 6.990 hours/ns, 39.739 timesteps/s 48.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.605 | 24.605 | 24.605 | 0.0 | 97.78 Neigh | 0.05563 | 0.05563 | 0.05563 | 0.0 | 0.22 Comm | 0.15464 | 0.15464 | 0.15464 | 0.0 | 0.61 Output | 6.1989e-05 | 6.1989e-05 | 6.1989e-05 | 0.0 | 0.00 Modify | 0.30796 | 0.30796 | 0.30796 | 0.0 | 1.22 Other | | 0.04108 | | | 0.16 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7975 ave 7975 max 7975 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562566 ave 562566 max 562566 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562566 Ave neighs/atom = 140.642 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -14024.693 -14024.693 -14159.96 -14159.96 261.68309 261.68309 69565.737 69565.737 -1492.3911 -1492.3911 2000 -14038.853 -14038.853 -14166.402 -14166.402 246.75247 246.75247 69194.871 69194.871 491.46418 491.46418 Loop time of 25.7367 on 1 procs for 1000 steps with 4000 atoms Performance: 3.357 ns/day, 7.149 hours/ns, 38.855 timesteps/s 47.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.158 | 25.158 | 25.158 | 0.0 | 97.75 Neigh | 0.038704 | 0.038704 | 0.038704 | 0.0 | 0.15 Comm | 0.092959 | 0.092959 | 0.092959 | 0.0 | 0.36 Output | 4.5061e-05 | 4.5061e-05 | 4.5061e-05 | 0.0 | 0.00 Modify | 0.4066 | 0.4066 | 0.4066 | 0.0 | 1.58 Other | | 0.04083 | | | 0.16 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8020 ave 8020 max 8020 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562798 ave 562798 max 562798 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562798 Ave neighs/atom = 140.7 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -14038.853 -14038.853 -14166.402 -14166.402 246.75247 246.75247 69194.871 69194.871 491.46418 491.46418 3000 -14037.777 -14037.777 -14167.706 -14167.706 251.357 251.357 69216.223 69216.223 554.7925 554.7925 Loop time of 25.9421 on 1 procs for 1000 steps with 4000 atoms Performance: 3.330 ns/day, 7.206 hours/ns, 38.547 timesteps/s 47.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.408 | 25.408 | 25.408 | 0.0 | 97.94 Neigh | 0.11301 | 0.11301 | 0.11301 | 0.0 | 0.44 Comm | 0.093434 | 0.093434 | 0.093434 | 0.0 | 0.36 Output | 4.3154e-05 | 4.3154e-05 | 4.3154e-05 | 0.0 | 0.00 Modify | 0.30743 | 0.30743 | 0.30743 | 0.0 | 1.19 Other | | 0.02068 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7994 ave 7994 max 7994 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562280 ave 562280 max 562280 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562280 Ave neighs/atom = 140.57 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -14037.777 -14037.777 -14167.706 -14167.706 251.357 251.357 69216.223 69216.223 554.7925 554.7925 4000 -14035.241 -14035.241 -14166.998 -14166.998 254.89411 254.89411 69255.762 69255.762 21.253634 21.253634 Loop time of 23.0247 on 1 procs for 1000 steps with 4000 atoms Performance: 3.752 ns/day, 6.396 hours/ns, 43.432 timesteps/s 52.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 22.396 | 22.396 | 22.396 | 0.0 | 97.27 Neigh | 0.07572 | 0.07572 | 0.07572 | 0.0 | 0.33 Comm | 0.20456 | 0.20456 | 0.20456 | 0.0 | 0.89 Output | 3.9101e-05 | 3.9101e-05 | 3.9101e-05 | 0.0 | 0.00 Modify | 0.32712 | 0.32712 | 0.32712 | 0.0 | 1.42 Other | | 0.02084 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8021 ave 8021 max 8021 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562490 ave 562490 max 562490 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562490 Ave neighs/atom = 140.623 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -14035.241 -14035.241 -14166.998 -14166.998 254.89411 254.89411 69255.762 69255.762 21.253634 21.253634 5000 -14038.055 -14038.055 -14166.209 -14166.209 247.92304 247.92304 69239.028 69239.028 331.5637 331.5637 Loop time of 28.8929 on 1 procs for 1000 steps with 4000 atoms Performance: 2.990 ns/day, 8.026 hours/ns, 34.611 timesteps/s 42.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.258 | 28.258 | 28.258 | 0.0 | 97.80 Neigh | 0.041046 | 0.041046 | 0.041046 | 0.0 | 0.14 Comm | 0.11324 | 0.11324 | 0.11324 | 0.0 | 0.39 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.43913 | 0.43913 | 0.43913 | 0.0 | 1.52 Other | | 0.04137 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8048 ave 8048 max 8048 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562456 ave 562456 max 562456 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562456 Ave neighs/atom = 140.614 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.655861423951, Press = 32.92201774327 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -14038.055 -14038.055 -14166.209 -14166.209 247.92304 247.92304 69239.028 69239.028 331.5637 331.5637 6000 -14034.73 -14034.73 -14168.522 -14168.522 258.83039 258.83039 69287.827 69287.827 -495.93911 -495.93911 Loop time of 33.1089 on 1 procs for 1000 steps with 4000 atoms Performance: 2.610 ns/day, 9.197 hours/ns, 30.203 timesteps/s 36.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 32.42 | 32.42 | 32.42 | 0.0 | 97.92 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13308 | 0.13308 | 0.13308 | 0.0 | 0.40 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.51428 | 0.51428 | 0.51428 | 0.0 | 1.55 Other | | 0.04137 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8029 ave 8029 max 8029 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562418 ave 562418 max 562418 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562418 Ave neighs/atom = 140.605 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.556845453561, Press = -11.0255924907659 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -14034.73 -14034.73 -14168.522 -14168.522 258.83039 258.83039 69287.827 69287.827 -495.93911 -495.93911 7000 -14039.261 -14039.261 -14168.108 -14168.108 249.26468 249.26468 69362.116 69362.116 -1145.987 -1145.987 Loop time of 31.3653 on 1 procs for 1000 steps with 4000 atoms Performance: 2.755 ns/day, 8.713 hours/ns, 31.882 timesteps/s 39.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.562 | 30.562 | 30.562 | 0.0 | 97.44 Neigh | 0.16884 | 0.16884 | 0.16884 | 0.0 | 0.54 Comm | 0.11421 | 0.11421 | 0.11421 | 0.0 | 0.36 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.45847 | 0.45847 | 0.45847 | 0.0 | 1.46 Other | | 0.06138 | | | 0.20 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7991 ave 7991 max 7991 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 561694 ave 561694 max 561694 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 561694 Ave neighs/atom = 140.423 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.993992057252, Press = -17.9718120712642 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -14039.261 -14039.261 -14168.108 -14168.108 249.26468 249.26468 69362.116 69362.116 -1145.987 -1145.987 8000 -14034.808 -14034.808 -14166.099 -14166.099 253.9908 253.9908 69201.485 69201.485 749.93855 749.93855 Loop time of 33.3235 on 1 procs for 1000 steps with 4000 atoms Performance: 2.593 ns/day, 9.257 hours/ns, 30.009 timesteps/s 36.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 32.609 | 32.609 | 32.609 | 0.0 | 97.86 Neigh | 0.11847 | 0.11847 | 0.11847 | 0.0 | 0.36 Comm | 0.21681 | 0.21681 | 0.21681 | 0.0 | 0.65 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.3176 | 0.3176 | 0.3176 | 0.0 | 0.95 Other | | 0.06114 | | | 0.18 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8035 ave 8035 max 8035 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562310 ave 562310 max 562310 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562310 Ave neighs/atom = 140.577 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.250858298115, Press = -7.17612166562759 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -14034.808 -14034.808 -14166.099 -14166.099 253.9908 253.9908 69201.485 69201.485 749.93855 749.93855 9000 -14036.668 -14036.668 -14167.477 -14167.477 253.06042 253.06042 69291.304 69291.304 -341.17997 -341.17997 Loop time of 31.8364 on 1 procs for 1000 steps with 4000 atoms Performance: 2.714 ns/day, 8.843 hours/ns, 31.411 timesteps/s 38.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 31.058 | 31.058 | 31.058 | 0.0 | 97.55 Neigh | 0.15062 | 0.15062 | 0.15062 | 0.0 | 0.47 Comm | 0.13376 | 0.13376 | 0.13376 | 0.0 | 0.42 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.473 | 0.473 | 0.473 | 0.0 | 1.49 Other | | 0.02104 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8012 ave 8012 max 8012 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562748 ave 562748 max 562748 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562748 Ave neighs/atom = 140.687 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.040532942372, Press = -5.42774940741684 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -14036.668 -14036.668 -14167.477 -14167.477 253.06042 253.06042 69291.304 69291.304 -341.17997 -341.17997 10000 -14036.965 -14036.965 -14168.415 -14168.415 254.29995 254.29995 69321.644 69321.644 -745.84628 -745.84628 Loop time of 28.6729 on 1 procs for 1000 steps with 4000 atoms Performance: 3.013 ns/day, 7.965 hours/ns, 34.876 timesteps/s 42.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.852 | 27.852 | 27.852 | 0.0 | 97.14 Neigh | 0.082094 | 0.082094 | 0.082094 | 0.0 | 0.29 Comm | 0.13331 | 0.13331 | 0.13331 | 0.0 | 0.46 Output | 4.22e-05 | 4.22e-05 | 4.22e-05 | 0.0 | 0.00 Modify | 0.55451 | 0.55451 | 0.55451 | 0.0 | 1.93 Other | | 0.05133 | | | 0.18 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7989 ave 7989 max 7989 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562018 ave 562018 max 562018 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562018 Ave neighs/atom = 140.505 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.838919084022, Press = -2.37286865632105 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -14036.965 -14036.965 -14168.415 -14168.415 254.29995 254.29995 69321.644 69321.644 -745.84628 -745.84628 11000 -14032.99 -14032.99 -14165.761 -14165.761 256.85493 256.85493 69305.472 69305.472 -156.80134 -156.80134 Loop time of 34.1564 on 1 procs for 1000 steps with 4000 atoms Performance: 2.530 ns/day, 9.488 hours/ns, 29.277 timesteps/s 35.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.422 | 33.422 | 33.422 | 0.0 | 97.85 Neigh | 0.035723 | 0.035723 | 0.035723 | 0.0 | 0.10 Comm | 0.17548 | 0.17548 | 0.17548 | 0.0 | 0.51 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.46196 | 0.46196 | 0.46196 | 0.0 | 1.35 Other | | 0.06131 | | | 0.18 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7984 ave 7984 max 7984 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562462 ave 562462 max 562462 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562462 Ave neighs/atom = 140.615 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.980918511356, Press = -2.82877859519238 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -14032.99 -14032.99 -14165.761 -14165.761 256.85493 256.85493 69305.472 69305.472 -156.80134 -156.80134 12000 -14038.737 -14038.737 -14169.434 -14169.434 252.841 252.841 69310.128 69310.128 -671.4895 -671.4895 Loop time of 34.0809 on 1 procs for 1000 steps with 4000 atoms Performance: 2.535 ns/day, 9.467 hours/ns, 29.342 timesteps/s 35.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.207 | 33.207 | 33.207 | 0.0 | 97.43 Neigh | 0.12888 | 0.12888 | 0.12888 | 0.0 | 0.38 Comm | 0.1744 | 0.1744 | 0.1744 | 0.0 | 0.51 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.44927 | 0.44927 | 0.44927 | 0.0 | 1.32 Other | | 0.1216 | | | 0.36 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7978 ave 7978 max 7978 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562414 ave 562414 max 562414 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562414 Ave neighs/atom = 140.603 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.087801323845, Press = 0.278508279296607 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -14038.737 -14038.737 -14169.434 -14169.434 252.841 252.841 69310.128 69310.128 -671.4895 -671.4895 13000 -14034.662 -14034.662 -14166.646 -14166.646 255.33131 255.33131 69207.297 69207.297 382.43606 382.43606 Loop time of 34.2218 on 1 procs for 1000 steps with 4000 atoms Performance: 2.525 ns/day, 9.506 hours/ns, 29.221 timesteps/s 35.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.36 | 33.36 | 33.36 | 0.0 | 97.48 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15334 | 0.15334 | 0.15334 | 0.0 | 0.45 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.60643 | 0.60643 | 0.60643 | 0.0 | 1.77 Other | | 0.1018 | | | 0.30 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7998 ave 7998 max 7998 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 561928 ave 561928 max 561928 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 561928 Ave neighs/atom = 140.482 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.089936096253, Press = 1.85631970858451 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -14034.662 -14034.662 -14166.646 -14166.646 255.33131 255.33131 69207.297 69207.297 382.43606 382.43606 14000 -14031.859 -14031.859 -14165.618 -14165.618 258.76523 258.76523 69239.509 69239.509 557.65501 557.65501 Loop time of 32.6177 on 1 procs for 1000 steps with 4000 atoms Performance: 2.649 ns/day, 9.060 hours/ns, 30.658 timesteps/s 37.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 31.973 | 31.973 | 31.973 | 0.0 | 98.02 Neigh | 0.055048 | 0.055048 | 0.055048 | 0.0 | 0.17 Comm | 0.053627 | 0.053627 | 0.053627 | 0.0 | 0.16 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.49453 | 0.49453 | 0.49453 | 0.0 | 1.52 Other | | 0.04142 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8031 ave 8031 max 8031 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562584 ave 562584 max 562584 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562584 Ave neighs/atom = 140.646 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.193398006581, Press = -1.35015643402779 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -14031.859 -14031.859 -14165.618 -14165.618 258.76523 258.76523 69239.509 69239.509 557.65501 557.65501 15000 -14032.144 -14032.144 -14165.773 -14165.773 258.51543 258.51543 69190.736 69190.736 840.8272 840.8272 Loop time of 34.4677 on 1 procs for 1000 steps with 4000 atoms Performance: 2.507 ns/day, 9.574 hours/ns, 29.013 timesteps/s 34.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.698 | 33.698 | 33.698 | 0.0 | 97.77 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.093332 | 0.093332 | 0.093332 | 0.0 | 0.27 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.57485 | 0.57485 | 0.57485 | 0.0 | 1.67 Other | | 0.1015 | | | 0.29 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7958 ave 7958 max 7958 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562726 ave 562726 max 562726 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562726 Ave neighs/atom = 140.681 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.189754437187, Press = 3.54735392193027 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -14032.144 -14032.144 -14165.773 -14165.773 258.51543 258.51543 69190.736 69190.736 840.8272 840.8272 16000 -14037.088 -14037.088 -14168.501 -14168.501 254.22696 254.22696 69203.884 69203.884 440.85658 440.85658 Loop time of 34.1712 on 1 procs for 1000 steps with 4000 atoms Performance: 2.528 ns/day, 9.492 hours/ns, 29.264 timesteps/s 36.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.32 | 33.32 | 33.32 | 0.0 | 97.51 Neigh | 0.26786 | 0.26786 | 0.26786 | 0.0 | 0.78 Comm | 0.13497 | 0.13497 | 0.13497 | 0.0 | 0.39 Output | 3.4809e-05 | 3.4809e-05 | 3.4809e-05 | 0.0 | 0.00 Modify | 0.40694 | 0.40694 | 0.40694 | 0.0 | 1.19 Other | | 0.04095 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7974 ave 7974 max 7974 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 561982 ave 561982 max 561982 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 561982 Ave neighs/atom = 140.495 Neighbor list builds = 6 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.268517311974, Press = -4.54999156059102 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -14037.088 -14037.088 -14168.501 -14168.501 254.22696 254.22696 69203.884 69203.884 440.85658 440.85658 17000 -14032.103 -14032.103 -14165.564 -14165.564 258.18865 258.18865 69320.031 69320.031 -301.52214 -301.52214 Loop time of 31.566 on 1 procs for 1000 steps with 4000 atoms Performance: 2.737 ns/day, 8.768 hours/ns, 31.680 timesteps/s 38.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.845 | 30.845 | 30.845 | 0.0 | 97.72 Neigh | 0.043456 | 0.043456 | 0.043456 | 0.0 | 0.14 Comm | 0.14405 | 0.14405 | 0.14405 | 0.0 | 0.46 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.49177 | 0.49177 | 0.49177 | 0.0 | 1.56 Other | | 0.0415 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7972 ave 7972 max 7972 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562112 ave 562112 max 562112 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562112 Ave neighs/atom = 140.528 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.316196397639, Press = -1.23164992041118 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -14032.103 -14032.103 -14165.564 -14165.564 258.18865 258.18865 69320.031 69320.031 -301.52214 -301.52214 18000 -14038.7 -14038.7 -14167.364 -14167.364 248.90865 248.90865 69257.487 69257.487 188.43108 188.43108 Loop time of 30.9831 on 1 procs for 1000 steps with 4000 atoms Performance: 2.789 ns/day, 8.606 hours/ns, 32.276 timesteps/s 39.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.037 | 30.037 | 30.037 | 0.0 | 96.94 Neigh | 0.15545 | 0.15545 | 0.15545 | 0.0 | 0.50 Comm | 0.11383 | 0.11383 | 0.11383 | 0.0 | 0.37 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.63596 | 0.63596 | 0.63596 | 0.0 | 2.05 Other | | 0.04127 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8030 ave 8030 max 8030 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562028 ave 562028 max 562028 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562028 Ave neighs/atom = 140.507 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.283296581194, Press = -1.50364157235169 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -14038.7 -14038.7 -14167.364 -14167.364 248.90865 248.90865 69257.487 69257.487 188.43108 188.43108 19000 -14033.727 -14033.727 -14166.252 -14166.252 256.3777 256.3777 69230.041 69230.041 445.83548 445.83548 Loop time of 30.7962 on 1 procs for 1000 steps with 4000 atoms Performance: 2.806 ns/day, 8.555 hours/ns, 32.472 timesteps/s 39.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.138 | 30.138 | 30.138 | 0.0 | 97.86 Neigh | 0.035626 | 0.035626 | 0.035626 | 0.0 | 0.12 Comm | 0.19356 | 0.19356 | 0.19356 | 0.0 | 0.63 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.40715 | 0.40715 | 0.40715 | 0.0 | 1.32 Other | | 0.02138 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7996 ave 7996 max 7996 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562420 ave 562420 max 562420 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562420 Ave neighs/atom = 140.605 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.249298345357, Press = -0.311602611624589 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -14033.727 -14033.727 -14166.252 -14166.252 256.3777 256.3777 69230.041 69230.041 445.83548 445.83548 20000 -14042.695 -14042.695 -14169.463 -14169.463 245.24222 245.24222 69182.139 69182.139 301.11238 301.11238 Loop time of 28.5066 on 1 procs for 1000 steps with 4000 atoms Performance: 3.031 ns/day, 7.919 hours/ns, 35.080 timesteps/s 41.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.888 | 27.888 | 27.888 | 0.0 | 97.83 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10269 | 0.10269 | 0.10269 | 0.0 | 0.36 Output | 3.7909e-05 | 3.7909e-05 | 3.7909e-05 | 0.0 | 0.00 Modify | 0.4547 | 0.4547 | 0.4547 | 0.0 | 1.60 Other | | 0.06171 | | | 0.22 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8045 ave 8045 max 8045 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562394 ave 562394 max 562394 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562394 Ave neighs/atom = 140.599 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.173940942577, Press = -0.748219322979098 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -14042.695 -14042.695 -14169.463 -14169.463 245.24222 245.24222 69182.139 69182.139 301.11238 301.11238 21000 -14034.469 -14034.469 -14164.461 -14164.461 251.47817 251.47817 69284.146 69284.146 250.69935 250.69935 Loop time of 29.1186 on 1 procs for 1000 steps with 4000 atoms Performance: 2.967 ns/day, 8.088 hours/ns, 34.342 timesteps/s 41.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.49 | 28.49 | 28.49 | 0.0 | 97.84 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.072938 | 0.072938 | 0.072938 | 0.0 | 0.25 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.49468 | 0.49468 | 0.49468 | 0.0 | 1.70 Other | | 0.06135 | | | 0.21 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8038 ave 8038 max 8038 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562500 ave 562500 max 562500 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562500 Ave neighs/atom = 140.625 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.12822101383, Press = -1.07211873911382 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -14034.469 -14034.469 -14164.461 -14164.461 251.47817 251.47817 69284.146 69284.146 250.69935 250.69935 22000 -14032.746 -14032.746 -14164.654 -14164.654 255.18543 255.18543 69262.016 69262.016 300.38558 300.38558 Loop time of 29.645 on 1 procs for 1000 steps with 4000 atoms Performance: 2.914 ns/day, 8.235 hours/ns, 33.732 timesteps/s 41.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.811 | 28.811 | 28.811 | 0.0 | 97.19 Neigh | 0.22073 | 0.22073 | 0.22073 | 0.0 | 0.74 Comm | 0.097058 | 0.097058 | 0.097058 | 0.0 | 0.33 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.43524 | 0.43524 | 0.43524 | 0.0 | 1.47 Other | | 0.08131 | | | 0.27 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7993 ave 7993 max 7993 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562690 ave 562690 max 562690 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562690 Ave neighs/atom = 140.673 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.156876545609, Press = 1.01974875460222 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -14032.746 -14032.746 -14164.654 -14164.654 255.18543 255.18543 69262.016 69262.016 300.38558 300.38558 23000 -14042.042 -14042.042 -14170.94 -14170.94 249.36131 249.36131 69113.13 69113.13 656.25583 656.25583 Loop time of 29.035 on 1 procs for 1000 steps with 4000 atoms Performance: 2.976 ns/day, 8.065 hours/ns, 34.441 timesteps/s 41.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.397 | 28.397 | 28.397 | 0.0 | 97.80 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13342 | 0.13342 | 0.13342 | 0.0 | 0.46 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.44316 | 0.44316 | 0.44316 | 0.0 | 1.53 Other | | 0.0617 | | | 0.21 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8021 ave 8021 max 8021 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562538 ave 562538 max 562538 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562538 Ave neighs/atom = 140.635 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.117770693227, Press = -2.31315038729878 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -14042.042 -14042.042 -14170.94 -14170.94 249.36131 249.36131 69113.13 69113.13 656.25583 656.25583 24000 -14035.471 -14035.471 -14167.68 -14167.68 255.76706 255.76706 69207.684 69207.684 431.27114 431.27114 Loop time of 29.5765 on 1 procs for 1000 steps with 4000 atoms Performance: 2.921 ns/day, 8.216 hours/ns, 33.811 timesteps/s 41.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.939 | 28.939 | 28.939 | 0.0 | 97.85 Neigh | 0.096439 | 0.096439 | 0.096439 | 0.0 | 0.33 Comm | 0.13448 | 0.13448 | 0.13448 | 0.0 | 0.45 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.30488 | 0.30488 | 0.30488 | 0.0 | 1.03 Other | | 0.1014 | | | 0.34 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7989 ave 7989 max 7989 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562678 ave 562678 max 562678 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562678 Ave neighs/atom = 140.669 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.066768983942, Press = 1.3250410669685 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -14035.471 -14035.471 -14167.68 -14167.68 255.76706 255.76706 69207.684 69207.684 431.27114 431.27114 25000 -14034.892 -14034.892 -14163.676 -14163.676 249.14053 249.14053 69396.668 69396.668 -741.69707 -741.69707 Loop time of 26.4171 on 1 procs for 1000 steps with 4000 atoms Performance: 3.271 ns/day, 7.338 hours/ns, 37.854 timesteps/s 45.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.711 | 25.711 | 25.711 | 0.0 | 97.33 Neigh | 0.13594 | 0.13594 | 0.13594 | 0.0 | 0.51 Comm | 0.18399 | 0.18399 | 0.18399 | 0.0 | 0.70 Output | 3.4809e-05 | 3.4809e-05 | 3.4809e-05 | 0.0 | 0.00 Modify | 0.34475 | 0.34475 | 0.34475 | 0.0 | 1.31 Other | | 0.04095 | | | 0.16 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7974 ave 7974 max 7974 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 561986 ave 561986 max 561986 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 561986 Ave neighs/atom = 140.496 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.053519542533, Press = -1.30453045215709 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -14034.892 -14034.892 -14163.676 -14163.676 249.14053 249.14053 69396.668 69396.668 -741.69707 -741.69707 26000 -14042.409 -14042.409 -14170.493 -14170.493 247.78712 247.78712 69255.433 69255.433 -468.33142 -468.33142 Loop time of 27.2557 on 1 procs for 1000 steps with 4000 atoms Performance: 3.170 ns/day, 7.571 hours/ns, 36.690 timesteps/s 44.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.441 | 26.441 | 26.441 | 0.0 | 97.01 Neigh | 0.13693 | 0.13693 | 0.13693 | 0.0 | 0.50 Comm | 0.093938 | 0.093938 | 0.093938 | 0.0 | 0.34 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.51261 | 0.51261 | 0.51261 | 0.0 | 1.88 Other | | 0.07124 | | | 0.26 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7967 ave 7967 max 7967 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 562566 ave 562566 max 562566 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 562566 Ave neighs/atom = 140.642 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T253.15.out" else "print 'not_converged' file output/vol_T253.15.out" print '${V}' file output/vol_T253.15.out 69257.2162615127 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0