# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.9946166351437573*${_u_distance} variable latticeconst_converted equal 3.9946166351437573*1 lattice fcc ${latticeconst_converted} lattice fcc 3.99461663514376 Lattice spacing in x,y,z = 3.99462 3.99462 3.99462 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (39.9462 39.9462 39.9462) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000492096 secs variable mass_converted equal 26.981538*${_u_mass} variable mass_converted equal 26.981538*1 # specify which KIM Model to use pair_style kim EMT_Asap_Standard_JacobsenStoltzeNorskov_1996_AlAgAuCuNiPdPt__MO_115316750986_001 pair_coeff * * Al mass 1 ${mass_converted} mass 1 26.981538 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 63741.9460982933 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 63741.9460982933/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 63741.9460982933/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 63741.9460982933/(1*1*${_u_distance}) variable V0_metal equal 63741.9460982933/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 63741.9460982933*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 63741.9460982933 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 253.15*${_u_temperature} variable temp_converted equal 253.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 253.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "253.15 - 0.2" variable T_up equal "253.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.61876 ghost atom cutoff = 7.61876 binsize = 3.80938, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.61876 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -13008.59 -13008.59 -13139.446 -13139.446 253.15 253.15 63741.946 63741.946 2192.7409 2192.7409 1000 -12864.61 -12864.61 -12994.798 -12994.798 251.85625 251.85625 65306.018 65306.018 -575.83488 -575.83488 Loop time of 71.8841 on 1 procs for 1000 steps with 4000 atoms Performance: 1.202 ns/day, 19.968 hours/ns, 13.911 timesteps/s 39.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 71.404 | 71.404 | 71.404 | 0.0 | 99.33 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.080806 | 0.080806 | 0.080806 | 0.0 | 0.11 Output | 4.4107e-05 | 4.4107e-05 | 4.4107e-05 | 0.0 | 0.00 Modify | 0.35899 | 0.35899 | 0.35899 | 0.0 | 0.50 Other | | 0.03975 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 536000 ave 536000 max 536000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 536000 Ave neighs/atom = 134 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -12864.61 -12864.61 -12994.798 -12994.798 251.85625 251.85625 65306.018 65306.018 -575.83488 -575.83488 2000 -12876.803 -12876.803 -13004.462 -13004.462 246.96672 246.96672 65110.907 65110.907 103.52473 103.52473 Loop time of 74.8399 on 1 procs for 1000 steps with 4000 atoms Performance: 1.154 ns/day, 20.789 hours/ns, 13.362 timesteps/s 39.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 74.375 | 74.375 | 74.375 | 0.0 | 99.38 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10556 | 0.10556 | 0.10556 | 0.0 | 0.14 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.2798 | 0.2798 | 0.2798 | 0.0 | 0.37 Other | | 0.07985 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 478724 ave 478724 max 478724 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 478724 Ave neighs/atom = 119.681 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -12876.803 -12876.803 -13004.462 -13004.462 246.96672 246.96672 65110.907 65110.907 103.52473 103.52473 3000 -12870.402 -12870.402 -13003.007 -13003.007 256.53401 256.53401 65181.082 65181.082 -70.90327 -70.90327 Loop time of 70.9156 on 1 procs for 1000 steps with 4000 atoms Performance: 1.218 ns/day, 19.699 hours/ns, 14.101 timesteps/s 41.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 70.467 | 70.467 | 70.467 | 0.0 | 99.37 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.079869 | 0.079869 | 0.079869 | 0.0 | 0.11 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.34877 | 0.34877 | 0.34877 | 0.0 | 0.49 Other | | 0.01986 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 483516 ave 483516 max 483516 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 483516 Ave neighs/atom = 120.879 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -12870.402 -12870.402 -13003.007 -13003.007 256.53401 256.53401 65181.082 65181.082 -70.90327 -70.90327 4000 -12872.85 -12872.85 -13000.736 -13000.736 247.40379 247.40379 65215.837 65215.837 -251.40816 -251.40816 Loop time of 67.9771 on 1 procs for 1000 steps with 4000 atoms Performance: 1.271 ns/day, 18.883 hours/ns, 14.711 timesteps/s 44.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 67.478 | 67.478 | 67.478 | 0.0 | 99.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13981 | 0.13981 | 0.13981 | 0.0 | 0.21 Output | 4.1962e-05 | 4.1962e-05 | 4.1962e-05 | 0.0 | 0.00 Modify | 0.31922 | 0.31922 | 0.31922 | 0.0 | 0.47 Other | | 0.03975 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 482898 ave 482898 max 482898 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 482898 Ave neighs/atom = 120.725 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -12872.85 -12872.85 -13000.736 -13000.736 247.40379 247.40379 65215.837 65215.837 -251.40816 -251.40816 5000 -12874.028 -12874.028 -13005.098 -13005.098 253.56338 253.56338 65053.111 65053.111 515.72969 515.72969 Loop time of 62.521 on 1 procs for 1000 steps with 4000 atoms Performance: 1.382 ns/day, 17.367 hours/ns, 15.995 timesteps/s 47.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 62.12 | 62.12 | 62.12 | 0.0 | 99.36 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.080187 | 0.080187 | 0.080187 | 0.0 | 0.13 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.3013 | 0.3013 | 0.3013 | 0.0 | 0.48 Other | | 0.01993 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 481902 ave 481902 max 481902 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 481902 Ave neighs/atom = 120.475 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 254.352770682728, Press = 189.316710821996 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -12874.028 -12874.028 -13005.098 -13005.098 253.56338 253.56338 65053.111 65053.111 515.72969 515.72969 6000 -12870.964 -12870.964 -13001.73 -13001.73 252.97477 252.97477 65262.554 65262.554 -556.6922 -556.6922 Loop time of 60.6854 on 1 procs for 1000 steps with 4000 atoms Performance: 1.424 ns/day, 16.857 hours/ns, 16.478 timesteps/s 49.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.218 | 60.218 | 60.218 | 0.0 | 99.23 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10938 | 0.10938 | 0.10938 | 0.0 | 0.18 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.33775 | 0.33775 | 0.33775 | 0.0 | 0.56 Other | | 0.02014 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 485244 ave 485244 max 485244 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 485244 Ave neighs/atom = 121.311 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.745816614928, Press = 3.54498097958851 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -12870.964 -12870.964 -13001.73 -13001.73 252.97477 252.97477 65262.554 65262.554 -556.6922 -556.6922 7000 -12874.575 -12874.575 -13004.503 -13004.503 251.3558 251.3558 65093.264 65093.264 302.73671 302.73671 Loop time of 70.1099 on 1 procs for 1000 steps with 4000 atoms Performance: 1.232 ns/day, 19.475 hours/ns, 14.263 timesteps/s 42.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 69.649 | 69.649 | 69.649 | 0.0 | 99.34 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11962 | 0.11962 | 0.11962 | 0.0 | 0.17 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.3213 | 0.3213 | 0.3213 | 0.0 | 0.46 Other | | 0.01968 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 480870 ave 480870 max 480870 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 480870 Ave neighs/atom = 120.218 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.121189643258, Press = 24.6519923339178 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -12874.575 -12874.575 -13004.503 -13004.503 251.3558 251.3558 65093.264 65093.264 302.73671 302.73671 8000 -12870.321 -12870.321 -13001.675 -13001.675 254.11329 254.11329 65157.637 65157.637 52.45152 52.45152 Loop time of 69.0577 on 1 procs for 1000 steps with 4000 atoms Performance: 1.251 ns/day, 19.183 hours/ns, 14.481 timesteps/s 42.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.499 | 68.499 | 68.499 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11931 | 0.11931 | 0.11931 | 0.0 | 0.17 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.39994 | 0.39994 | 0.39994 | 0.0 | 0.58 Other | | 0.03984 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 484208 ave 484208 max 484208 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 484208 Ave neighs/atom = 121.052 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.013565205057, Press = -6.1439361318045 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -12870.321 -12870.321 -13001.675 -13001.675 254.11329 254.11329 65157.637 65157.637 52.45152 52.45152 9000 -12872.986 -12872.986 -13003.51 -13003.51 252.50812 252.50812 65210.663 65210.663 -386.63435 -386.63435 Loop time of 67.622 on 1 procs for 1000 steps with 4000 atoms Performance: 1.278 ns/day, 18.784 hours/ns, 14.788 timesteps/s 43.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 67.112 | 67.112 | 67.112 | 0.0 | 99.25 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11851 | 0.11851 | 0.11851 | 0.0 | 0.18 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.35236 | 0.35236 | 0.35236 | 0.0 | 0.52 Other | | 0.03944 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 482336 ave 482336 max 482336 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 482336 Ave neighs/atom = 120.584 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.141479287184, Press = 10.3787714988662 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -12872.986 -12872.986 -13003.51 -13003.51 252.50812 252.50812 65210.663 65210.663 -386.63435 -386.63435 10000 -12871.462 -12871.462 -13004.738 -13004.738 257.83257 257.83257 65069.177 65069.177 437.14892 437.14892 Loop time of 70.3055 on 1 procs for 1000 steps with 4000 atoms Performance: 1.229 ns/day, 19.529 hours/ns, 14.224 timesteps/s 41.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 69.655 | 69.655 | 69.655 | 0.0 | 99.07 Neigh | 0.033372 | 0.033372 | 0.033372 | 0.0 | 0.05 Comm | 0.1496 | 0.1496 | 0.1496 | 0.0 | 0.21 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.40856 | 0.40856 | 0.40856 | 0.0 | 0.58 Other | | 0.05923 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 482566 ave 482566 max 482566 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 482566 Ave neighs/atom = 120.641 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.43515925895, Press = 1.79311093012521 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -12871.462 -12871.462 -13004.738 -13004.738 257.83257 257.83257 65069.177 65069.177 437.14892 437.14892 11000 -12874.985 -12874.985 -13004.169 -13004.169 249.91557 249.91557 65193.582 65193.582 -282.0172 -282.0172 Loop time of 70.3517 on 1 procs for 1000 steps with 4000 atoms Performance: 1.228 ns/day, 19.542 hours/ns, 14.214 timesteps/s 41.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 69.891 | 69.891 | 69.891 | 0.0 | 99.34 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.092404 | 0.092404 | 0.092404 | 0.0 | 0.13 Output | 3.2187e-05 | 3.2187e-05 | 3.2187e-05 | 0.0 | 0.00 Modify | 0.34905 | 0.34905 | 0.34905 | 0.0 | 0.50 Other | | 0.01935 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 484522 ave 484522 max 484522 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 484522 Ave neighs/atom = 121.13 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.378982220448, Press = 3.28994181880292 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -12874.985 -12874.985 -13004.169 -13004.169 249.91557 249.91557 65193.582 65193.582 -282.0172 -282.0172 12000 -12870.073 -12870.073 -13000.999 -13000.999 253.28591 253.28591 65158.015 65158.015 98.294984 98.294984 Loop time of 78.482 on 1 procs for 1000 steps with 4000 atoms Performance: 1.101 ns/day, 21.801 hours/ns, 12.742 timesteps/s 37.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 77.986 | 77.986 | 77.986 | 0.0 | 99.37 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.098373 | 0.098373 | 0.098373 | 0.0 | 0.13 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.35789 | 0.35789 | 0.35789 | 0.0 | 0.46 Other | | 0.03919 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 482412 ave 482412 max 482412 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 482412 Ave neighs/atom = 120.603 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.379787930632, Press = 3.77686928996663 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -12870.073 -12870.073 -13000.999 -13000.999 253.28591 253.28591 65158.015 65158.015 98.294984 98.294984 13000 -12871.345 -12871.345 -13001.169 -13001.169 251.15211 251.15211 65155.436 65155.436 91.763824 91.763824 Loop time of 76.5766 on 1 procs for 1000 steps with 4000 atoms Performance: 1.128 ns/day, 21.271 hours/ns, 13.059 timesteps/s 38.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 75.98 | 75.98 | 75.98 | 0.0 | 99.22 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.098214 | 0.098214 | 0.098214 | 0.0 | 0.13 Output | 2.5034e-05 | 2.5034e-05 | 2.5034e-05 | 0.0 | 0.00 Modify | 0.45849 | 0.45849 | 0.45849 | 0.0 | 0.60 Other | | 0.03942 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5842 ave 5842 max 5842 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 482310 ave 482310 max 482310 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 482310 Ave neighs/atom = 120.578 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.324116941634, Press = 1.44319041813588 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -12871.345 -12871.345 -13001.169 -13001.169 251.15211 251.15211 65155.436 65155.436 91.763824 91.763824 14000 -12871.997 -12871.997 -13005.439 -13005.439 258.15348 258.15348 65154.46 65154.46 16.416707 16.416707 Loop time of 72.7154 on 1 procs for 1000 steps with 4000 atoms Performance: 1.188 ns/day, 20.199 hours/ns, 13.752 timesteps/s 39.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 72.1 | 72.1 | 72.1 | 0.0 | 99.15 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.16893 | 0.16893 | 0.16893 | 0.0 | 0.23 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.3074 | 0.3074 | 0.3074 | 0.0 | 0.42 Other | | 0.1394 | | | 0.19 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 482972 ave 482972 max 482972 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 482972 Ave neighs/atom = 120.743 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.510418795292, Press = 3.05316859322047 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -12871.997 -12871.997 -13005.439 -13005.439 258.15348 258.15348 65154.46 65154.46 16.416707 16.416707 15000 -12874.775 -12874.775 -13004.087 -13004.087 250.16424 250.16424 65129.136 65129.136 131.83445 131.83445 Loop time of 78.5283 on 1 procs for 1000 steps with 4000 atoms Performance: 1.100 ns/day, 21.813 hours/ns, 12.734 timesteps/s 37.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 78.013 | 78.013 | 78.013 | 0.0 | 99.34 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058093 | 0.058093 | 0.058093 | 0.0 | 0.07 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.37749 | 0.37749 | 0.37749 | 0.0 | 0.48 Other | | 0.07927 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 483542 ave 483542 max 483542 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 483542 Ave neighs/atom = 120.885 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.367463635303, Press = 1.14867220841962 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -12874.775 -12874.775 -13004.087 -13004.087 250.16424 250.16424 65129.136 65129.136 131.83445 131.83445 16000 -12870.679 -12870.679 -13001.842 -13001.842 253.74375 253.74375 65222.027 65222.027 -301.12031 -301.12031 Loop time of 87.6058 on 1 procs for 1000 steps with 4000 atoms Performance: 0.986 ns/day, 24.335 hours/ns, 11.415 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 87.008 | 87.008 | 87.008 | 0.0 | 99.32 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11893 | 0.11893 | 0.11893 | 0.0 | 0.14 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.43895 | 0.43895 | 0.43895 | 0.0 | 0.50 Other | | 0.0395 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 484020 ave 484020 max 484020 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 484020 Ave neighs/atom = 121.005 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.353639683596, Press = 2.12041227137965 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -12870.679 -12870.679 -13001.842 -13001.842 253.74375 253.74375 65222.027 65222.027 -301.12031 -301.12031 17000 -12873.381 -12873.381 -13005.121 -13005.121 254.86098 254.86098 64924.492 64924.492 1242.8181 1242.8181 Loop time of 87.9912 on 1 procs for 1000 steps with 4000 atoms Performance: 0.982 ns/day, 24.442 hours/ns, 11.365 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 87.314 | 87.314 | 87.314 | 0.0 | 99.23 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.078596 | 0.078596 | 0.078596 | 0.0 | 0.09 Output | 5.2214e-05 | 5.2214e-05 | 5.2214e-05 | 0.0 | 0.00 Modify | 0.53934 | 0.53934 | 0.53934 | 0.0 | 0.61 Other | | 0.05942 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 481760 ave 481760 max 481760 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 481760 Ave neighs/atom = 120.44 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.33438708932, Press = 2.48269707913929 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -12873.381 -12873.381 -13005.121 -13005.121 254.86098 254.86098 64924.492 64924.492 1242.8181 1242.8181 18000 -12870.849 -12870.849 -13003.629 -13003.629 256.87287 256.87287 65264.737 65264.737 -543.40125 -543.40125 Loop time of 88.1417 on 1 procs for 1000 steps with 4000 atoms Performance: 0.980 ns/day, 24.484 hours/ns, 11.345 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 87.523 | 87.523 | 87.523 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15956 | 0.15956 | 0.15956 | 0.0 | 0.18 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.37963 | 0.37963 | 0.37963 | 0.0 | 0.43 Other | | 0.07955 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 486778 ave 486778 max 486778 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 486778 Ave neighs/atom = 121.695 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.412391424513, Press = -1.45424823781929 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -12870.849 -12870.849 -13003.629 -13003.629 256.87287 256.87287 65264.737 65264.737 -543.40125 -543.40125 19000 -12870.254 -12870.254 -13002.334 -13002.334 255.51736 255.51736 65185.132 65185.132 -157.6593 -157.6593 Loop time of 84.8493 on 1 procs for 1000 steps with 4000 atoms Performance: 1.018 ns/day, 23.569 hours/ns, 11.786 timesteps/s 34.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 84.213 | 84.213 | 84.213 | 0.0 | 99.25 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.17893 | 0.17893 | 0.17893 | 0.0 | 0.21 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.41762 | 0.41762 | 0.41762 | 0.0 | 0.49 Other | | 0.03937 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 481498 ave 481498 max 481498 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 481498 Ave neighs/atom = 120.374 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.375124835034, Press = 3.40554625647689 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -12870.254 -12870.254 -13002.334 -13002.334 255.51736 255.51736 65185.132 65185.132 -157.6593 -157.6593 20000 -12876.054 -12876.054 -13004.453 -13004.453 248.39722 248.39722 65068.181 65068.181 416.69478 416.69478 Loop time of 81.4663 on 1 procs for 1000 steps with 4000 atoms Performance: 1.061 ns/day, 22.630 hours/ns, 12.275 timesteps/s 35.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 80.879 | 80.879 | 80.879 | 0.0 | 99.28 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058545 | 0.058545 | 0.058545 | 0.0 | 0.07 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.41932 | 0.41932 | 0.41932 | 0.0 | 0.51 Other | | 0.1092 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 481880 ave 481880 max 481880 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 481880 Ave neighs/atom = 120.47 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.356483001683, Press = 0.320039330554394 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -12876.054 -12876.054 -13004.453 -13004.453 248.39722 248.39722 65068.181 65068.181 416.69478 416.69478 21000 -12868.053 -12868.053 -13001.359 -13001.359 257.89067 257.89067 65261.71 65261.71 -498.34361 -498.34361 Loop time of 82.5988 on 1 procs for 1000 steps with 4000 atoms Performance: 1.046 ns/day, 22.944 hours/ns, 12.107 timesteps/s 35.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 81.868 | 81.868 | 81.868 | 0.0 | 99.12 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11173 | 0.11173 | 0.11173 | 0.0 | 0.14 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.55973 | 0.55973 | 0.55973 | 0.0 | 0.68 Other | | 0.05945 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 484710 ave 484710 max 484710 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 484710 Ave neighs/atom = 121.177 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.383890699164, Press = 1.77679500731094 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -12868.053 -12868.053 -13001.359 -13001.359 257.89067 257.89067 65261.71 65261.71 -498.34361 -498.34361 22000 -12872.835 -12872.835 -13002.334 -13002.334 250.52432 250.52432 65020.401 65020.401 751.17487 751.17487 Loop time of 80.5284 on 1 procs for 1000 steps with 4000 atoms Performance: 1.073 ns/day, 22.369 hours/ns, 12.418 timesteps/s 36.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 79.931 | 79.931 | 79.931 | 0.0 | 99.26 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058374 | 0.058374 | 0.058374 | 0.0 | 0.07 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.47963 | 0.47963 | 0.47963 | 0.0 | 0.60 Other | | 0.05939 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 480556 ave 480556 max 480556 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 480556 Ave neighs/atom = 120.139 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.349951170238, Press = 2.16083082938349 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -12872.835 -12872.835 -13002.334 -13002.334 250.52432 250.52432 65020.401 65020.401 751.17487 751.17487 23000 -12873.67 -12873.67 -13004.547 -13004.547 253.19166 253.19166 65280.32 65280.32 -721.50278 -721.50278 Loop time of 75.4332 on 1 procs for 1000 steps with 4000 atoms Performance: 1.145 ns/day, 20.954 hours/ns, 13.257 timesteps/s 38.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 74.791 | 74.791 | 74.791 | 0.0 | 99.15 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.089998 | 0.089998 | 0.089998 | 0.0 | 0.12 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.4728 | 0.4728 | 0.4728 | 0.0 | 0.63 Other | | 0.07941 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 484504 ave 484504 max 484504 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 484504 Ave neighs/atom = 121.126 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.31562275241, Press = -1.31167850600269 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -12873.67 -12873.67 -13004.547 -13004.547 253.19166 253.19166 65280.32 65280.32 -721.50278 -721.50278 24000 -12872.169 -12872.169 -13005.284 -13005.284 257.51944 257.51944 65148.753 65148.753 16.73412 16.73412 Loop time of 66.1425 on 1 procs for 1000 steps with 4000 atoms Performance: 1.306 ns/day, 18.373 hours/ns, 15.119 timesteps/s 44.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 65.746 | 65.746 | 65.746 | 0.0 | 99.40 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058421 | 0.058421 | 0.058421 | 0.0 | 0.09 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.31889 | 0.31889 | 0.31889 | 0.0 | 0.48 Other | | 0.01931 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 480694 ave 480694 max 480694 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 480694 Ave neighs/atom = 120.174 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.332508175222, Press = 2.76780730152721 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -12872.169 -12872.169 -13005.284 -13005.284 257.51944 257.51944 65148.753 65148.753 16.73412 16.73412 25000 -12874.747 -12874.747 -13004.875 -13004.875 251.74114 251.74114 65091.419 65091.419 358.00243 358.00243 Loop time of 60.2503 on 1 procs for 1000 steps with 4000 atoms Performance: 1.434 ns/day, 16.736 hours/ns, 16.597 timesteps/s 48.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 59.829 | 59.829 | 59.829 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058656 | 0.058656 | 0.058656 | 0.0 | 0.10 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.32285 | 0.32285 | 0.32285 | 0.0 | 0.54 Other | | 0.03928 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 483402 ave 483402 max 483402 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 483402 Ave neighs/atom = 120.85 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.34335659016, Press = 0.51488344229408 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -12874.747 -12874.747 -13004.875 -13004.875 251.74114 251.74114 65091.419 65091.419 358.00243 358.00243 26000 -12869.978 -12869.978 -13003.779 -13003.779 258.84734 258.84734 65222.36 65222.36 -284.0543 -284.0543 Loop time of 58.6385 on 1 procs for 1000 steps with 4000 atoms Performance: 1.473 ns/day, 16.288 hours/ns, 17.054 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 58.121 | 58.121 | 58.121 | 0.0 | 99.12 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.07877 | 0.07877 | 0.07877 | 0.0 | 0.13 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.41957 | 0.41957 | 0.41957 | 0.0 | 0.72 Other | | 0.01942 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 484540 ave 484540 max 484540 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 484540 Ave neighs/atom = 121.135 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.312484152575, Press = 1.28070079778836 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 26000 -12869.978 -12869.978 -13003.779 -13003.779 258.84734 258.84734 65222.36 65222.36 -284.0543 -284.0543 27000 -12879.779 -12879.779 -13006.231 -13006.231 244.63124 244.63124 65020.952 65020.952 590.50456 590.50456 Loop time of 55.146 on 1 procs for 1000 steps with 4000 atoms Performance: 1.567 ns/day, 15.318 hours/ns, 18.134 timesteps/s 53.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 54.66 | 54.66 | 54.66 | 0.0 | 99.12 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.068786 | 0.068786 | 0.068786 | 0.0 | 0.12 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.35842 | 0.35842 | 0.35842 | 0.0 | 0.65 Other | | 0.05893 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 482156 ave 482156 max 482156 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 482156 Ave neighs/atom = 120.539 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.265693321912, Press = 1.08873365060225 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 27000 -12879.779 -12879.779 -13006.231 -13006.231 244.63124 244.63124 65020.952 65020.952 590.50456 590.50456 28000 -12868.908 -12868.908 -13001.248 -13001.248 256.02232 256.02232 65323.04 65323.04 -797.65768 -797.65768 Loop time of 65.8321 on 1 procs for 1000 steps with 4000 atoms Performance: 1.312 ns/day, 18.287 hours/ns, 15.190 timesteps/s 44.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 65.385 | 65.385 | 65.385 | 0.0 | 99.32 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.038438 | 0.038438 | 0.038438 | 0.0 | 0.06 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.36985 | 0.36985 | 0.36985 | 0.0 | 0.56 Other | | 0.03926 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 485744 ave 485744 max 485744 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 485744 Ave neighs/atom = 121.436 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T253.15.out" else "print 'not_converged' file output/vol_T253.15.out" print '${V}' file output/vol_T253.15.out 65153.1966929179 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0