# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.9946166351437573*${_u_distance} variable latticeconst_converted equal 3.9946166351437573*1 lattice fcc ${latticeconst_converted} lattice fcc 3.99461663514376 Lattice spacing in x,y,z = 3.99462 3.99462 3.99462 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (39.9462 39.9462 39.9462) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000458002 secs variable mass_converted equal 26.981538*${_u_mass} variable mass_converted equal 26.981538*1 # specify which KIM Model to use pair_style kim EMT_Asap_Standard_JacobsenStoltzeNorskov_1996_AlAgAuCuNiPdPt__MO_115316750986_001 pair_coeff * * Al mass 1 ${mass_converted} mass 1 26.981538 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 63741.9460982933 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 63741.9460982933/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 63741.9460982933/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 63741.9460982933/(1*1*${_u_distance}) variable V0_metal equal 63741.9460982933/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 63741.9460982933*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 63741.9460982933 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 273.15*${_u_temperature} variable temp_converted equal 273.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 273.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "273.15 - 0.2" variable T_up equal "273.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.61876 ghost atom cutoff = 7.61876 binsize = 3.80938, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.61876 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -12998.252 -12998.252 -13139.446 -13139.446 273.15 273.15 63741.946 63741.946 2365.9775 2365.9775 1000 -12842.817 -12842.817 -12983.126 -12983.126 271.43774 271.43774 65434.715 65434.715 -701.19871 -701.19871 Loop time of 73.5737 on 1 procs for 1000 steps with 4000 atoms Performance: 1.174 ns/day, 20.437 hours/ns, 13.592 timesteps/s 38.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 72.987 | 72.987 | 72.987 | 0.0 | 99.20 Neigh | 0.056675 | 0.056675 | 0.056675 | 0.0 | 0.08 Comm | 0.09952 | 0.09952 | 0.09952 | 0.0 | 0.14 Output | 4.7922e-05 | 4.7922e-05 | 4.7922e-05 | 0.0 | 0.00 Modify | 0.41031 | 0.41031 | 0.41031 | 0.0 | 0.56 Other | | 0.0198 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 475210 ave 475210 max 475210 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 475210 Ave neighs/atom = 118.802 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -12842.817 -12842.817 -12983.126 -12983.126 271.43774 271.43774 65434.715 65434.715 -701.19871 -701.19871 2000 -12856.037 -12856.037 -12993.757 -12993.757 266.42837 266.42837 65189.736 65189.736 226.41851 226.41851 Loop time of 75.9298 on 1 procs for 1000 steps with 4000 atoms Performance: 1.138 ns/day, 21.092 hours/ns, 13.170 timesteps/s 38.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 75.187 | 75.187 | 75.187 | 0.0 | 99.02 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.17013 | 0.17013 | 0.17013 | 0.0 | 0.22 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.53225 | 0.53225 | 0.53225 | 0.0 | 0.70 Other | | 0.04003 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 475164 ave 475164 max 475164 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 475164 Ave neighs/atom = 118.791 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -12856.037 -12856.037 -12993.757 -12993.757 266.42837 266.42837 65189.736 65189.736 226.41851 226.41851 3000 -12848.951 -12848.951 -12992.274 -12992.274 277.26907 277.26907 65327.536 65327.536 -291.59039 -291.59039 Loop time of 68.1087 on 1 procs for 1000 steps with 4000 atoms Performance: 1.269 ns/day, 18.919 hours/ns, 14.682 timesteps/s 43.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 67.701 | 67.701 | 67.701 | 0.0 | 99.40 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.068904 | 0.068904 | 0.068904 | 0.0 | 0.10 Output | 4.3869e-05 | 4.3869e-05 | 4.3869e-05 | 0.0 | 0.00 Modify | 0.29881 | 0.29881 | 0.29881 | 0.0 | 0.44 Other | | 0.03986 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 480554 ave 480554 max 480554 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 480554 Ave neighs/atom = 120.138 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -12848.951 -12848.951 -12992.274 -12992.274 277.26907 277.26907 65327.536 65327.536 -291.59039 -291.59039 4000 -12851.785 -12851.785 -12991.526 -12991.526 270.33942 270.33942 65244.316 65244.316 89.649198 89.649198 Loop time of 70.2963 on 1 procs for 1000 steps with 4000 atoms Performance: 1.229 ns/day, 19.527 hours/ns, 14.226 timesteps/s 42.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 69.764 | 69.764 | 69.764 | 0.0 | 99.24 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.079547 | 0.079547 | 0.079547 | 0.0 | 0.11 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.39316 | 0.39316 | 0.39316 | 0.0 | 0.56 Other | | 0.06001 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 478676 ave 478676 max 478676 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 478676 Ave neighs/atom = 119.669 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -12851.785 -12851.785 -12991.526 -12991.526 270.33942 270.33942 65244.316 65244.316 89.649198 89.649198 5000 -12852.761 -12852.761 -12993.823 -12993.823 272.89262 272.89262 65281.64 65281.64 -141.81497 -141.81497 Loop time of 62.2865 on 1 procs for 1000 steps with 4000 atoms Performance: 1.387 ns/day, 17.302 hours/ns, 16.055 timesteps/s 46.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 61.77 | 61.77 | 61.77 | 0.0 | 99.17 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.099304 | 0.099304 | 0.099304 | 0.0 | 0.16 Output | 2.718e-05 | 2.718e-05 | 2.718e-05 | 0.0 | 0.00 Modify | 0.31711 | 0.31711 | 0.31711 | 0.0 | 0.51 Other | | 0.09967 | | | 0.16 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 479830 ave 479830 max 479830 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 479830 Ave neighs/atom = 119.957 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 274.896346838192, Press = 44.3800376336775 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -12852.761 -12852.761 -12993.823 -12993.823 272.89262 272.89262 65281.64 65281.64 -141.81497 -141.81497 6000 -12849.883 -12849.883 -12991.903 -12991.903 274.74874 274.74874 65211.176 65211.176 329.76209 329.76209 Loop time of 59.2759 on 1 procs for 1000 steps with 4000 atoms Performance: 1.458 ns/day, 16.466 hours/ns, 16.870 timesteps/s 49.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 58.825 | 58.825 | 58.825 | 0.0 | 99.24 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1193 | 0.1193 | 0.1193 | 0.0 | 0.20 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.29213 | 0.29213 | 0.29213 | 0.0 | 0.49 Other | | 0.03959 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 479948 ave 479948 max 479948 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 479948 Ave neighs/atom = 119.987 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.832552268515, Press = -11.7987309190844 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -12849.883 -12849.883 -12991.903 -12991.903 274.74874 274.74874 65211.176 65211.176 329.76209 329.76209 7000 -12853.788 -12853.788 -12994.761 -12994.761 272.72167 272.72167 65330.983 65330.983 -482.33358 -482.33358 Loop time of 69.033 on 1 procs for 1000 steps with 4000 atoms Performance: 1.252 ns/day, 19.176 hours/ns, 14.486 timesteps/s 42.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.483 | 68.483 | 68.483 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11892 | 0.11892 | 0.11892 | 0.0 | 0.17 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.37215 | 0.37215 | 0.37215 | 0.0 | 0.54 Other | | 0.05936 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5843 ave 5843 max 5843 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 480454 ave 480454 max 480454 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 480454 Ave neighs/atom = 120.114 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.061374082098, Press = 15.5857938422626 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -12853.788 -12853.788 -12994.761 -12994.761 272.72167 272.72167 65330.983 65330.983 -482.33358 -482.33358 8000 -12846.746 -12846.746 -12991.434 -12991.434 279.90791 279.90791 65214.584 65214.584 352.76336 352.76336 Loop time of 69.1787 on 1 procs for 1000 steps with 4000 atoms Performance: 1.249 ns/day, 19.216 hours/ns, 14.455 timesteps/s 41.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.604 | 68.604 | 68.604 | 0.0 | 99.17 Neigh | 0.05545 | 0.05545 | 0.05545 | 0.0 | 0.08 Comm | 0.059236 | 0.059236 | 0.059236 | 0.0 | 0.09 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.38023 | 0.38023 | 0.38023 | 0.0 | 0.55 Other | | 0.07955 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 477454 ave 477454 max 477454 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 477454 Ave neighs/atom = 119.364 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.247866659429, Press = -14.6864206097267 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -12846.746 -12846.746 -12991.434 -12991.434 279.90791 279.90791 65214.584 65214.584 352.76336 352.76336 9000 -12853.477 -12853.477 -12992.436 -12992.436 268.82487 268.82487 65290.281 65290.281 -213.41932 -213.41932 Loop time of 69.1757 on 1 procs for 1000 steps with 4000 atoms Performance: 1.249 ns/day, 19.215 hours/ns, 14.456 timesteps/s 41.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.631 | 68.631 | 68.631 | 0.0 | 99.21 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.068466 | 0.068466 | 0.068466 | 0.0 | 0.10 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.43688 | 0.43688 | 0.43688 | 0.0 | 0.63 Other | | 0.03936 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 480356 ave 480356 max 480356 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 480356 Ave neighs/atom = 120.089 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.45277498652, Press = 5.53827702849374 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -12853.477 -12853.477 -12992.436 -12992.436 268.82487 268.82487 65290.281 65290.281 -213.41932 -213.41932 10000 -12848.865 -12848.865 -12990.671 -12990.671 274.33429 274.33429 65240.876 65240.876 195.39792 195.39792 Loop time of 69.9257 on 1 procs for 1000 steps with 4000 atoms Performance: 1.236 ns/day, 19.424 hours/ns, 14.301 timesteps/s 41.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 69.58 | 69.58 | 69.58 | 0.0 | 99.51 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.057841 | 0.057841 | 0.057841 | 0.0 | 0.08 Output | 5.0068e-05 | 5.0068e-05 | 5.0068e-05 | 0.0 | 0.00 Modify | 0.26864 | 0.26864 | 0.26864 | 0.0 | 0.38 Other | | 0.01903 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 479262 ave 479262 max 479262 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 479262 Ave neighs/atom = 119.816 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.500662952581, Press = -1.34904575907117 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -12848.865 -12848.865 -12990.671 -12990.671 274.33429 274.33429 65240.876 65240.876 195.39792 195.39792 11000 -12858.25 -12858.25 -12994.521 -12994.521 263.62438 263.62438 65221.848 65221.848 75.782911 75.782911 Loop time of 68.9142 on 1 procs for 1000 steps with 4000 atoms Performance: 1.254 ns/day, 19.143 hours/ns, 14.511 timesteps/s 41.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.418 | 68.418 | 68.418 | 0.0 | 99.28 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058057 | 0.058057 | 0.058057 | 0.0 | 0.08 Output | 3.0994e-05 | 3.0994e-05 | 3.0994e-05 | 0.0 | 0.00 Modify | 0.37936 | 0.37936 | 0.37936 | 0.0 | 0.55 Other | | 0.05918 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 480002 ave 480002 max 480002 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 480002 Ave neighs/atom = 120.001 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.372705440732, Press = 0.505512710111544 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -12858.25 -12858.25 -12994.521 -12994.521 263.62438 263.62438 65221.848 65221.848 75.782911 75.782911 12000 -12850.623 -12850.623 -12992.661 -12992.661 274.78151 274.78151 65235.432 65235.432 103.54982 103.54982 Loop time of 76.6211 on 1 procs for 1000 steps with 4000 atoms Performance: 1.128 ns/day, 21.284 hours/ns, 13.051 timesteps/s 37.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 76.097 | 76.097 | 76.097 | 0.0 | 99.32 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.097516 | 0.097516 | 0.097516 | 0.0 | 0.13 Output | 2.718e-05 | 2.718e-05 | 2.718e-05 | 0.0 | 0.00 Modify | 0.36739 | 0.36739 | 0.36739 | 0.0 | 0.48 Other | | 0.059 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 480742 ave 480742 max 480742 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 480742 Ave neighs/atom = 120.186 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.083763077877, Press = 0.722660246697963 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -12850.623 -12850.623 -12992.661 -12992.661 274.78151 274.78151 65235.432 65235.432 103.54982 103.54982 13000 -12856.417 -12856.417 -12995.096 -12995.096 268.28406 268.28406 65259.852 65259.852 -76.651771 -76.651771 Loop time of 74.8279 on 1 procs for 1000 steps with 4000 atoms Performance: 1.155 ns/day, 20.786 hours/ns, 13.364 timesteps/s 38.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 74.372 | 74.372 | 74.372 | 0.0 | 99.39 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.098485 | 0.098485 | 0.098485 | 0.0 | 0.13 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.29795 | 0.29795 | 0.29795 | 0.0 | 0.40 Other | | 0.05893 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5842 ave 5842 max 5842 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 479964 ave 479964 max 479964 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 479964 Ave neighs/atom = 119.991 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.942307749152, Press = -1.35320761464252 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -12856.417 -12856.417 -12995.096 -12995.096 268.28406 268.28406 65259.852 65259.852 -76.651771 -76.651771 14000 -12852.859 -12852.859 -12995.965 -12995.965 276.84833 276.84833 65234.717 65234.717 8.4685693 8.4685693 Loop time of 72.4523 on 1 procs for 1000 steps with 4000 atoms Performance: 1.193 ns/day, 20.126 hours/ns, 13.802 timesteps/s 39.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 71.849 | 71.849 | 71.849 | 0.0 | 99.17 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13767 | 0.13767 | 0.13767 | 0.0 | 0.19 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.42711 | 0.42711 | 0.42711 | 0.0 | 0.59 Other | | 0.03898 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5843 ave 5843 max 5843 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 479926 ave 479926 max 479926 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 479926 Ave neighs/atom = 119.981 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.9979695398, Press = 2.00883344393682 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -12852.859 -12852.859 -12995.965 -12995.965 276.84833 276.84833 65234.717 65234.717 8.4685693 8.4685693 15000 -12845.327 -12845.327 -12989.519 -12989.519 278.94883 278.94883 65330.07 65330.07 -265.68084 -265.68084 Loop time of 75.6372 on 1 procs for 1000 steps with 4000 atoms Performance: 1.142 ns/day, 21.010 hours/ns, 13.221 timesteps/s 37.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 75.035 | 75.035 | 75.035 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11895 | 0.11895 | 0.11895 | 0.0 | 0.16 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.41073 | 0.41073 | 0.41073 | 0.0 | 0.54 Other | | 0.07233 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 480802 ave 480802 max 480802 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 480802 Ave neighs/atom = 120.201 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.079030039489, Press = -3.64800506586365 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -12845.327 -12845.327 -12989.519 -12989.519 278.94883 278.94883 65330.07 65330.07 -265.68084 -265.68084 16000 -12851.376 -12851.376 -12993.998 -12993.998 275.91102 275.91102 65187.838 65187.838 467.98883 467.98883 Loop time of 87.0109 on 1 procs for 1000 steps with 4000 atoms Performance: 0.993 ns/day, 24.170 hours/ns, 11.493 timesteps/s 33.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 86.492 | 86.492 | 86.492 | 0.0 | 99.40 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10679 | 0.10679 | 0.10679 | 0.0 | 0.12 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.39281 | 0.39281 | 0.39281 | 0.0 | 0.45 Other | | 0.019 | | | 0.02 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 478456 ave 478456 max 478456 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 478456 Ave neighs/atom = 119.614 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.178452690976, Press = 3.7017292692623 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -12851.376 -12851.376 -12993.998 -12993.998 275.91102 275.91102 65187.838 65187.838 467.98883 467.98883 17000 -12850.952 -12850.952 -12991.432 -12991.432 271.76801 271.76801 65302.32 65302.32 -287.23339 -287.23339 Loop time of 86.4555 on 1 procs for 1000 steps with 4000 atoms Performance: 0.999 ns/day, 24.015 hours/ns, 11.567 timesteps/s 33.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 85.835 | 85.835 | 85.835 | 0.0 | 99.28 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12837 | 0.12837 | 0.12837 | 0.0 | 0.15 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.40467 | 0.40467 | 0.40467 | 0.0 | 0.47 Other | | 0.08765 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 481408 ave 481408 max 481408 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 481408 Ave neighs/atom = 120.352 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.272471901925, Press = -2.42343143299523 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -12850.952 -12850.952 -12991.432 -12991.432 271.76801 271.76801 65302.32 65302.32 -287.23339 -287.23339 18000 -12851.157 -12851.157 -12993.596 -12993.596 275.55763 275.55763 65239.403 65239.403 97.862608 97.862608 Loop time of 86.9071 on 1 procs for 1000 steps with 4000 atoms Performance: 0.994 ns/day, 24.141 hours/ns, 11.507 timesteps/s 33.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 86.402 | 86.402 | 86.402 | 0.0 | 99.42 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.079008 | 0.079008 | 0.079008 | 0.0 | 0.09 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.3872 | 0.3872 | 0.3872 | 0.0 | 0.45 Other | | 0.03923 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 478276 ave 478276 max 478276 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 478276 Ave neighs/atom = 119.569 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.222447081151, Press = 0.505186584481314 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -12851.157 -12851.157 -12993.596 -12993.596 275.55763 275.55763 65239.403 65239.403 97.862608 97.862608 19000 -12857.451 -12857.451 -12998.166 -12998.166 272.22295 272.22295 65224.41 65224.41 -2.0164698 -2.0164698 Loop time of 83.6774 on 1 procs for 1000 steps with 4000 atoms Performance: 1.033 ns/day, 23.244 hours/ns, 11.951 timesteps/s 34.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 83.002 | 83.002 | 83.002 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.077873 | 0.077873 | 0.077873 | 0.0 | 0.09 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.55849 | 0.55849 | 0.55849 | 0.0 | 0.67 Other | | 0.03902 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 479930 ave 479930 max 479930 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 479930 Ave neighs/atom = 119.983 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.184970793338, Press = -1.03936083892297 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -12857.451 -12857.451 -12998.166 -12998.166 272.22295 272.22295 65224.41 65224.41 -2.0164698 -2.0164698 20000 -12849.055 -12849.055 -12991.272 -12991.272 275.1275 275.1275 65260.661 65260.661 7.500157 7.500157 Loop time of 79.2451 on 1 procs for 1000 steps with 4000 atoms Performance: 1.090 ns/day, 22.013 hours/ns, 12.619 timesteps/s 36.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 78.759 | 78.759 | 78.759 | 0.0 | 99.39 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.078144 | 0.078144 | 0.078144 | 0.0 | 0.10 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.36914 | 0.36914 | 0.36914 | 0.0 | 0.47 Other | | 0.03914 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 481442 ave 481442 max 481442 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 481442 Ave neighs/atom = 120.361 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.139804413442, Press = 0.628987303090791 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -12849.055 -12849.055 -12991.272 -12991.272 275.1275 275.1275 65260.661 65260.661 7.500157 7.500157 21000 -12849.95 -12849.95 -12993.131 -12993.131 276.99394 276.99394 65369.217 65369.217 -591.80091 -591.80091 Loop time of 81.5644 on 1 procs for 1000 steps with 4000 atoms Performance: 1.059 ns/day, 22.657 hours/ns, 12.260 timesteps/s 35.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 81.027 | 81.027 | 81.027 | 0.0 | 99.34 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.077945 | 0.077945 | 0.077945 | 0.0 | 0.10 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.40003 | 0.40003 | 0.40003 | 0.0 | 0.49 Other | | 0.05928 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 479192 ave 479192 max 479192 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 479192 Ave neighs/atom = 119.798 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.057483435976, Press = -1.95587727168065 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -12849.95 -12849.95 -12993.131 -12993.131 276.99394 276.99394 65369.217 65369.217 -591.80091 -591.80091 22000 -12848.293 -12848.293 -12989.869 -12989.869 273.88763 273.88763 65159.557 65159.557 672.36712 672.36712 Loop time of 79.642 on 1 procs for 1000 steps with 4000 atoms Performance: 1.085 ns/day, 22.123 hours/ns, 12.556 timesteps/s 36.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 79.025 | 79.025 | 79.025 | 0.0 | 99.23 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1487 | 0.1487 | 0.1487 | 0.0 | 0.19 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.38919 | 0.38919 | 0.38919 | 0.0 | 0.49 Other | | 0.07924 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 478236 ave 478236 max 478236 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 478236 Ave neighs/atom = 119.559 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.026213780951, Press = 1.47709465254252 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -12848.293 -12848.293 -12989.869 -12989.869 273.88763 273.88763 65159.557 65159.557 672.36712 672.36712 23000 -12854.443 -12854.443 -12995.624 -12995.624 273.12414 273.12414 65337.457 65337.457 -537.67891 -537.67891 Loop time of 76.2053 on 1 procs for 1000 steps with 4000 atoms Performance: 1.134 ns/day, 21.168 hours/ns, 13.122 timesteps/s 37.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 75.693 | 75.693 | 75.693 | 0.0 | 99.33 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058204 | 0.058204 | 0.058204 | 0.0 | 0.08 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.39505 | 0.39505 | 0.39505 | 0.0 | 0.52 Other | | 0.05924 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 480750 ave 480750 max 480750 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 480750 Ave neighs/atom = 120.188 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.018037532123, Press = -0.85866252699893 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -12854.443 -12854.443 -12995.624 -12995.624 273.12414 273.12414 65337.457 65337.457 -537.67891 -537.67891 24000 -12852.792 -12852.792 -12991.735 -12991.735 268.79533 268.79533 65175.358 65175.358 443.09485 443.09485 Loop time of 68.3326 on 1 procs for 1000 steps with 4000 atoms Performance: 1.264 ns/day, 18.981 hours/ns, 14.634 timesteps/s 41.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 67.887 | 67.887 | 67.887 | 0.0 | 99.35 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12814 | 0.12814 | 0.12814 | 0.0 | 0.19 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.29823 | 0.29823 | 0.29823 | 0.0 | 0.44 Other | | 0.01884 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 479116 ave 479116 max 479116 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 479116 Ave neighs/atom = 119.779 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.005574437484, Press = 0.340930160791164 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -12852.792 -12852.792 -12991.735 -12991.735 268.79533 268.79533 65175.358 65175.358 443.09485 443.09485 25000 -12851.092 -12851.092 -12992.48 -12992.48 273.52512 273.52512 65325.767 65325.767 -413.71013 -413.71013 Loop time of 60.9343 on 1 procs for 1000 steps with 4000 atoms Performance: 1.418 ns/day, 16.926 hours/ns, 16.411 timesteps/s 47.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.517 | 60.517 | 60.517 | 0.0 | 99.32 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.078287 | 0.078287 | 0.078287 | 0.0 | 0.13 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.29984 | 0.29984 | 0.29984 | 0.0 | 0.49 Other | | 0.03908 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 480530 ave 480530 max 480530 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 480530 Ave neighs/atom = 120.132 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.042698817533, Press = -0.421503507318803 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -12851.092 -12851.092 -12992.48 -12992.48 273.52512 273.52512 65325.767 65325.767 -413.71013 -413.71013 26000 -12851.705 -12851.705 -12992.341 -12992.341 272.06928 272.06928 65236.28 65236.28 86.689543 86.689543 Loop time of 57.9249 on 1 procs for 1000 steps with 4000 atoms Performance: 1.492 ns/day, 16.090 hours/ns, 17.264 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 57.47 | 57.47 | 57.47 | 0.0 | 99.21 Neigh | 0.03547 | 0.03547 | 0.03547 | 0.0 | 0.06 Comm | 0.079108 | 0.079108 | 0.079108 | 0.0 | 0.14 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.29938 | 0.29938 | 0.29938 | 0.0 | 0.52 Other | | 0.04105 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5842 ave 5842 max 5842 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 480734 ave 480734 max 480734 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 480734 Ave neighs/atom = 120.183 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T273.15.out" else "print 'not_converged' file output/vol_T273.15.out" print '${V}' file output/vol_T273.15.out 65256.09253204 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0