# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.9946166351437573*${_u_distance} variable latticeconst_converted equal 3.9946166351437573*1 lattice fcc ${latticeconst_converted} lattice fcc 3.99461663514376 Lattice spacing in x,y,z = 3.99462 3.99462 3.99462 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (39.9462 39.9462 39.9462) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000451088 secs variable mass_converted equal 26.981538*${_u_mass} variable mass_converted equal 26.981538*1 # specify which KIM Model to use pair_style kim EMT_Asap_Standard_JacobsenStoltzeNorskov_1996_AlAgAuCuNiPdPt__MO_115316750986_001 pair_coeff * * Al mass 1 ${mass_converted} mass 1 26.981538 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 63741.9460982933 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 63741.9460982933/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 63741.9460982933/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 63741.9460982933/(1*1*${_u_distance}) variable V0_metal equal 63741.9460982933/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 63741.9460982933*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 63741.9460982933 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.61876 ghost atom cutoff = 7.61876 binsize = 3.80938, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.61876 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -12977.576 -12977.576 -13139.446 -13139.446 313.15 313.15 63741.946 63741.946 2712.4509 2712.4509 1000 -12798.594 -12798.594 -12960.241 -12960.241 312.71677 312.71677 65496.602 65496.602 159.50859 159.50859 Loop time of 75.7745 on 1 procs for 1000 steps with 4000 atoms Performance: 1.140 ns/day, 21.048 hours/ns, 13.197 timesteps/s 37.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 75.27 | 75.27 | 75.27 | 0.0 | 99.33 Neigh | 0.035983 | 0.035983 | 0.035983 | 0.0 | 0.05 Comm | 0.059596 | 0.059596 | 0.059596 | 0.0 | 0.08 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.38875 | 0.38875 | 0.38875 | 0.0 | 0.51 Other | | 0.02008 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 481166 ave 481166 max 481166 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 481166 Ave neighs/atom = 120.291 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -12798.594 -12798.594 -12960.241 -12960.241 312.71677 312.71677 65496.602 65496.602 159.50859 159.50859 2000 -12814.804 -12814.804 -12972.622 -12972.622 305.30979 305.30979 65491.099 65491.099 -361.32537 -361.32537 Loop time of 73.6226 on 1 procs for 1000 steps with 4000 atoms Performance: 1.174 ns/day, 20.451 hours/ns, 13.583 timesteps/s 39.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 73.032 | 73.032 | 73.032 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.069957 | 0.069957 | 0.069957 | 0.0 | 0.10 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.42008 | 0.42008 | 0.42008 | 0.0 | 0.57 Other | | 0.1002 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 471714 ave 471714 max 471714 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 471714 Ave neighs/atom = 117.928 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -12814.804 -12814.804 -12972.622 -12972.622 305.30979 305.30979 65491.099 65491.099 -361.32537 -361.32537 3000 -12805.627 -12805.627 -12970.766 -12970.766 319.47177 319.47177 65506.342 65506.342 -130.8992 -130.8992 Loop time of 71.454 on 1 procs for 1000 steps with 4000 atoms Performance: 1.209 ns/day, 19.848 hours/ns, 13.995 timesteps/s 40.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 70.925 | 70.925 | 70.925 | 0.0 | 99.26 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13973 | 0.13973 | 0.13973 | 0.0 | 0.20 Output | 3.6955e-05 | 3.6955e-05 | 3.6955e-05 | 0.0 | 0.00 Modify | 0.36922 | 0.36922 | 0.36922 | 0.0 | 0.52 Other | | 0.01988 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 472986 ave 472986 max 472986 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 472986 Ave neighs/atom = 118.246 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -12805.627 -12805.627 -12970.766 -12970.766 319.47177 319.47177 65506.342 65506.342 -130.8992 -130.8992 4000 -12810.083 -12810.083 -12971.832 -12971.832 312.91511 312.91511 65444.454 65444.454 78.435517 78.435517 Loop time of 67.6719 on 1 procs for 1000 steps with 4000 atoms Performance: 1.277 ns/day, 18.798 hours/ns, 14.777 timesteps/s 43.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 67.042 | 67.042 | 67.042 | 0.0 | 99.07 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.09969 | 0.09969 | 0.09969 | 0.0 | 0.15 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.51015 | 0.51015 | 0.51015 | 0.0 | 0.75 Other | | 0.02012 | | | 0.03 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 473118 ave 473118 max 473118 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 473118 Ave neighs/atom = 118.279 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -12810.083 -12810.083 -12971.832 -12971.832 312.91511 312.91511 65444.454 65444.454 78.435517 78.435517 5000 -12809.48 -12809.48 -12971.266 -12971.266 312.98606 312.98606 65474.9 65474.9 -21.458936 -21.458936 Loop time of 60.9012 on 1 procs for 1000 steps with 4000 atoms Performance: 1.419 ns/day, 16.917 hours/ns, 16.420 timesteps/s 48.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.375 | 60.375 | 60.375 | 0.0 | 99.14 Neigh | 0.037282 | 0.037282 | 0.037282 | 0.0 | 0.06 Comm | 0.080187 | 0.080187 | 0.080187 | 0.0 | 0.13 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.36913 | 0.36913 | 0.36913 | 0.0 | 0.61 Other | | 0.03993 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 473434 ave 473434 max 473434 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 473434 Ave neighs/atom = 118.359 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 314.829065016028, Press = 126.68256652831 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -12809.48 -12809.48 -12971.266 -12971.266 312.98606 312.98606 65474.9 65474.9 -21.458936 -21.458936 6000 -12808.287 -12808.287 -12969.911 -12969.911 312.67365 312.67365 65539.871 65539.871 -419.0317 -419.0317 Loop time of 59.1626 on 1 procs for 1000 steps with 4000 atoms Performance: 1.460 ns/day, 16.434 hours/ns, 16.903 timesteps/s 49.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 58.705 | 58.705 | 58.705 | 0.0 | 99.23 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.082979 | 0.082979 | 0.082979 | 0.0 | 0.14 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.31438 | 0.31438 | 0.31438 | 0.0 | 0.53 Other | | 0.06015 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 474042 ave 474042 max 474042 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 474042 Ave neighs/atom = 118.51 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.659454756287, Press = 1.84307132019211 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -12808.287 -12808.287 -12969.911 -12969.911 312.67365 312.67365 65539.871 65539.871 -419.0317 -419.0317 7000 -12809.881 -12809.881 -12970.58 -12970.58 310.88276 310.88276 65411.744 65411.744 391.29931 391.29931 Loop time of 68.3566 on 1 procs for 1000 steps with 4000 atoms Performance: 1.264 ns/day, 18.988 hours/ns, 14.629 timesteps/s 42.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 67.916 | 67.916 | 67.916 | 0.0 | 99.36 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.099056 | 0.099056 | 0.099056 | 0.0 | 0.14 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.30121 | 0.30121 | 0.30121 | 0.0 | 0.44 Other | | 0.03996 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 472218 ave 472218 max 472218 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 472218 Ave neighs/atom = 118.055 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.065327899332, Press = -16.8146281826304 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -12809.881 -12809.881 -12970.58 -12970.58 310.88276 310.88276 65411.744 65411.744 391.29931 391.29931 8000 -12808.979 -12808.979 -12971.354 -12971.354 314.12667 314.12667 65288.046 65288.046 961.42652 961.42652 Loop time of 67.6795 on 1 procs for 1000 steps with 4000 atoms Performance: 1.277 ns/day, 18.800 hours/ns, 14.776 timesteps/s 42.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 67.097 | 67.097 | 67.097 | 0.0 | 99.14 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.16172 | 0.16172 | 0.16172 | 0.0 | 0.24 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.36057 | 0.36057 | 0.36057 | 0.0 | 0.53 Other | | 0.05978 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 474594 ave 474594 max 474594 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 474594 Ave neighs/atom = 118.648 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.875945555266, Press = 7.92983237329443 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -12808.979 -12808.979 -12971.354 -12971.354 314.12667 314.12667 65288.046 65288.046 961.42652 961.42652 9000 -12809.169 -12809.169 -12969.936 -12969.936 311.01457 311.01457 65524.307 65524.307 -240.59145 -240.59145 Loop time of 69.0165 on 1 procs for 1000 steps with 4000 atoms Performance: 1.252 ns/day, 19.171 hours/ns, 14.489 timesteps/s 42.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.39 | 68.39 | 68.39 | 0.0 | 99.09 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.098415 | 0.098415 | 0.098415 | 0.0 | 0.14 Output | 4.6968e-05 | 4.6968e-05 | 4.6968e-05 | 0.0 | 0.00 Modify | 0.48791 | 0.48791 | 0.48791 | 0.0 | 0.71 Other | | 0.03969 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5842 ave 5842 max 5842 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 476672 ave 476672 max 476672 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 476672 Ave neighs/atom = 119.168 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.967570229993, Press = 10.3750905056042 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -12809.169 -12809.169 -12969.936 -12969.936 311.01457 311.01457 65524.307 65524.307 -240.59145 -240.59145 10000 -12809.624 -12809.624 -12972.667 -12972.667 315.41665 315.41665 65535.929 65535.929 -531.06044 -531.06044 Loop time of 68.9083 on 1 procs for 1000 steps with 4000 atoms Performance: 1.254 ns/day, 19.141 hours/ns, 14.512 timesteps/s 41.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.364 | 68.364 | 68.364 | 0.0 | 99.21 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10837 | 0.10837 | 0.10837 | 0.0 | 0.16 Output | 5.2929e-05 | 5.2929e-05 | 5.2929e-05 | 0.0 | 0.00 Modify | 0.39654 | 0.39654 | 0.39654 | 0.0 | 0.58 Other | | 0.03944 | | | 0.06 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 472964 ave 472964 max 472964 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 472964 Ave neighs/atom = 118.241 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.877122150738, Press = 0.870903933197568 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -12809.624 -12809.624 -12972.667 -12972.667 315.41665 315.41665 65535.929 65535.929 -531.06044 -531.06044 11000 -12806.813 -12806.813 -12972.111 -12972.111 319.77925 319.77925 65455.276 65455.276 -22.824484 -22.824484 Loop time of 68.1486 on 1 procs for 1000 steps with 4000 atoms Performance: 1.268 ns/day, 18.930 hours/ns, 14.674 timesteps/s 42.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 67.708 | 67.708 | 67.708 | 0.0 | 99.35 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.071967 | 0.071967 | 0.071967 | 0.0 | 0.11 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.31877 | 0.31877 | 0.31877 | 0.0 | 0.47 Other | | 0.04972 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 472466 ave 472466 max 472466 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 472466 Ave neighs/atom = 118.117 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.076171996549, Press = -2.16851255810492 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -12806.813 -12806.813 -12972.111 -12972.111 319.77925 319.77925 65455.276 65455.276 -22.824484 -22.824484 12000 -12811.577 -12811.577 -12973.6 -12973.6 313.44467 313.44467 65366.637 65366.637 419.30542 419.30542 Loop time of 77.1 on 1 procs for 1000 steps with 4000 atoms Performance: 1.121 ns/day, 21.417 hours/ns, 12.970 timesteps/s 37.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 76.527 | 76.527 | 76.527 | 0.0 | 99.26 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.077974 | 0.077974 | 0.077974 | 0.0 | 0.10 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.43544 | 0.43544 | 0.43544 | 0.0 | 0.56 Other | | 0.05944 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 473796 ave 473796 max 473796 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 473796 Ave neighs/atom = 118.449 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.098556363355, Press = 0.987836171312981 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -12811.577 -12811.577 -12973.6 -12973.6 313.44467 313.44467 65366.637 65366.637 419.30542 419.30542 13000 -12806.99 -12806.99 -12968.84 -12968.84 313.10989 313.10989 65481.012 65481.012 -59.800043 -59.800043 Loop time of 74.7524 on 1 procs for 1000 steps with 4000 atoms Performance: 1.156 ns/day, 20.765 hours/ns, 13.377 timesteps/s 38.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 74.151 | 74.151 | 74.151 | 0.0 | 99.20 Neigh | 0.044182 | 0.044182 | 0.044182 | 0.0 | 0.06 Comm | 0.13891 | 0.13891 | 0.13891 | 0.0 | 0.19 Output | 5.2929e-05 | 5.2929e-05 | 5.2929e-05 | 0.0 | 0.00 Modify | 0.37877 | 0.37877 | 0.37877 | 0.0 | 0.51 Other | | 0.03959 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 473332 ave 473332 max 473332 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 473332 Ave neighs/atom = 118.333 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.203617687261, Press = 5.83199367142992 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -12806.99 -12806.99 -12968.84 -12968.84 313.10989 313.10989 65481.012 65481.012 -59.800043 -59.800043 14000 -12812.943 -12812.943 -12971.865 -12971.865 307.44512 307.44512 65648.238 65648.238 -1171.0789 -1171.0789 Loop time of 71.9806 on 1 procs for 1000 steps with 4000 atoms Performance: 1.200 ns/day, 19.995 hours/ns, 13.893 timesteps/s 39.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 71.422 | 71.422 | 71.422 | 0.0 | 99.22 Neigh | 0.033044 | 0.033044 | 0.033044 | 0.0 | 0.05 Comm | 0.11857 | 0.11857 | 0.11857 | 0.0 | 0.16 Output | 3.8862e-05 | 3.8862e-05 | 3.8862e-05 | 0.0 | 0.00 Modify | 0.3675 | 0.3675 | 0.3675 | 0.0 | 0.51 Other | | 0.03907 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5845 ave 5845 max 5845 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 472232 ave 472232 max 472232 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 472232 Ave neighs/atom = 118.058 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.236777699259, Press = -1.35886632146593 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -12812.943 -12812.943 -12971.865 -12971.865 307.44512 307.44512 65648.238 65648.238 -1171.0789 -1171.0789 15000 -12801.759 -12801.759 -12969.132 -12969.132 323.79513 323.79513 65431.006 65431.006 360.61675 360.61675 Loop time of 74.6074 on 1 procs for 1000 steps with 4000 atoms Performance: 1.158 ns/day, 20.724 hours/ns, 13.403 timesteps/s 38.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 74.211 | 74.211 | 74.211 | 0.0 | 99.47 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.038007 | 0.038007 | 0.038007 | 0.0 | 0.05 Output | 0.020086 | 0.020086 | 0.020086 | 0.0 | 0.03 Modify | 0.29824 | 0.29824 | 0.29824 | 0.0 | 0.40 Other | | 0.03973 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 470826 ave 470826 max 470826 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 470826 Ave neighs/atom = 117.707 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.207790788313, Press = -1.55168833213164 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -12801.759 -12801.759 -12969.132 -12969.132 323.79513 323.79513 65431.006 65431.006 360.61675 360.61675 16000 -12810.022 -12810.022 -12974.049 -12974.049 317.32107 317.32107 65380.166 65380.166 412.04635 412.04635 Loop time of 86.277 on 1 procs for 1000 steps with 4000 atoms Performance: 1.001 ns/day, 23.966 hours/ns, 11.591 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 85.698 | 85.698 | 85.698 | 0.0 | 99.33 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.098958 | 0.098958 | 0.098958 | 0.0 | 0.11 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.44017 | 0.44017 | 0.44017 | 0.0 | 0.51 Other | | 0.0394 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 474376 ave 474376 max 474376 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 474376 Ave neighs/atom = 118.594 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.387409238086, Press = 2.33558552006311 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -12810.022 -12810.022 -12974.049 -12974.049 317.32107 317.32107 65380.166 65380.166 412.04635 412.04635 17000 -12807.264 -12807.264 -12970.578 -12970.578 315.94114 315.94114 65526.06 65526.06 -317.23871 -317.23871 Loop time of 85.7869 on 1 procs for 1000 steps with 4000 atoms Performance: 1.007 ns/day, 23.830 hours/ns, 11.657 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 85.05 | 85.05 | 85.05 | 0.0 | 99.14 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1182 | 0.1182 | 0.1182 | 0.0 | 0.14 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.47858 | 0.47858 | 0.47858 | 0.0 | 0.56 Other | | 0.1397 | | | 0.16 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5842 ave 5842 max 5842 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 475294 ave 475294 max 475294 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 475294 Ave neighs/atom = 118.823 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.423060454744, Press = 2.24747563128769 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -12807.264 -12807.264 -12970.578 -12970.578 315.94114 315.94114 65526.06 65526.06 -317.23871 -317.23871 18000 -12810.021 -12810.021 -12973.403 -12973.403 316.07453 316.07453 65565.521 65565.521 -722.85935 -722.85935 Loop time of 85.858 on 1 procs for 1000 steps with 4000 atoms Performance: 1.006 ns/day, 23.849 hours/ns, 11.647 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 85.282 | 85.282 | 85.282 | 0.0 | 99.33 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15814 | 0.15814 | 0.15814 | 0.0 | 0.18 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.35812 | 0.35812 | 0.35812 | 0.0 | 0.42 Other | | 0.05938 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 472376 ave 472376 max 472376 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 472376 Ave neighs/atom = 118.094 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.420995177093, Press = -0.583117868323447 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -12810.021 -12810.021 -12973.403 -12973.403 316.07453 316.07453 65565.521 65565.521 -722.85935 -722.85935 19000 -12810.293 -12810.293 -12972.262 -12972.262 313.3388 313.3388 65279.469 65279.469 1027.8747 1027.8747 Loop time of 84.2637 on 1 procs for 1000 steps with 4000 atoms Performance: 1.025 ns/day, 23.407 hours/ns, 11.868 timesteps/s 34.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 83.396 | 83.396 | 83.396 | 0.0 | 98.97 Neigh | 0.14946 | 0.14946 | 0.14946 | 0.0 | 0.18 Comm | 0.13962 | 0.13962 | 0.13962 | 0.0 | 0.17 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.51946 | 0.51946 | 0.51946 | 0.0 | 0.62 Other | | 0.0592 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5843 ave 5843 max 5843 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 475916 ave 475916 max 475916 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 475916 Ave neighs/atom = 118.979 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.508502320815, Press = -4.14337065453518 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -12810.293 -12810.293 -12972.262 -12972.262 313.3388 313.3388 65279.469 65279.469 1027.8747 1027.8747 20000 -12807.821 -12807.821 -12971.327 -12971.327 316.3134 316.3134 65360.724 65360.724 621.958 621.958 Loop time of 80.9292 on 1 procs for 1000 steps with 4000 atoms Performance: 1.068 ns/day, 22.480 hours/ns, 12.356 timesteps/s 35.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 80.393 | 80.393 | 80.393 | 0.0 | 99.34 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.07805 | 0.07805 | 0.07805 | 0.0 | 0.10 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.41876 | 0.41876 | 0.41876 | 0.0 | 0.52 Other | | 0.03971 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 477184 ave 477184 max 477184 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 477184 Ave neighs/atom = 119.296 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.398201342212, Press = 3.03307575718692 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -12807.821 -12807.821 -12971.327 -12971.327 316.3134 316.3134 65360.724 65360.724 621.958 621.958 21000 -12808.597 -12808.597 -12968.03 -12968.03 308.43394 308.43394 65557.573 65557.573 -472.61737 -472.61737 Loop time of 79.3066 on 1 procs for 1000 steps with 4000 atoms Performance: 1.089 ns/day, 22.030 hours/ns, 12.609 timesteps/s 36.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 78.786 | 78.786 | 78.786 | 0.0 | 99.34 Neigh | 0.056255 | 0.056255 | 0.056255 | 0.0 | 0.07 Comm | 0.065901 | 0.065901 | 0.065901 | 0.0 | 0.08 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.32767 | 0.32767 | 0.32767 | 0.0 | 0.41 Other | | 0.0705 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 473938 ave 473938 max 473938 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 473938 Ave neighs/atom = 118.484 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.29524793999, Press = 1.5738245379144 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -12808.597 -12808.597 -12968.03 -12968.03 308.43394 308.43394 65557.573 65557.573 -472.61737 -472.61737 22000 -12812.862 -12812.862 -12974.587 -12974.587 312.86898 312.86898 65518.075 65518.075 -494.37732 -494.37732 Loop time of 79.2027 on 1 procs for 1000 steps with 4000 atoms Performance: 1.091 ns/day, 22.001 hours/ns, 12.626 timesteps/s 36.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 78.469 | 78.469 | 78.469 | 0.0 | 99.07 Neigh | 0.055639 | 0.055639 | 0.055639 | 0.0 | 0.07 Comm | 0.11913 | 0.11913 | 0.11913 | 0.0 | 0.15 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.49933 | 0.49933 | 0.49933 | 0.0 | 0.63 Other | | 0.05944 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 474900 ave 474900 max 474900 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 474900 Ave neighs/atom = 118.725 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.172715045768, Press = -0.233834580354027 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -12812.862 -12812.862 -12974.587 -12974.587 312.86898 312.86898 65518.075 65518.075 -494.37732 -494.37732 23000 -12812.493 -12812.493 -12973.718 -12973.718 311.90087 311.90087 65378.518 65378.518 315.64721 315.64721 Loop time of 78.4881 on 1 procs for 1000 steps with 4000 atoms Performance: 1.101 ns/day, 21.802 hours/ns, 12.741 timesteps/s 36.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 77.76 | 77.76 | 77.76 | 0.0 | 99.07 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.17814 | 0.17814 | 0.17814 | 0.0 | 0.23 Output | 3.4809e-05 | 3.4809e-05 | 3.4809e-05 | 0.0 | 0.00 Modify | 0.45078 | 0.45078 | 0.45078 | 0.0 | 0.57 Other | | 0.09926 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 473224 ave 473224 max 473224 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 473224 Ave neighs/atom = 118.306 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 65461.6286036986 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0