# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.210718545317654*${_u_distance} variable latticeconst_converted equal 4.210718545317654*1 lattice fcc ${latticeconst_converted} lattice fcc 4.21071854531765 Lattice spacing in x,y,z = 4.21072 4.21072 4.21072 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (42.1072 42.1072 42.1072) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000457048 secs variable mass_converted equal 26.981538*${_u_mass} variable mass_converted equal 26.981538*1 # specify which KIM Model to use pair_style kim EAM_Dynamo_SchopfBrommerFrigan_2012_AlMnPd__MO_137572817842_000 pair_coeff * * Al mass 1 ${mass_converted} mass 1 26.981538 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 74656.6742285268 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 74656.6742285268/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 74656.6742285268/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 74656.6742285268/(1*1*${_u_distance}) variable V0_metal equal 74656.6742285268/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 74656.6742285268*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 74656.6742285268 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 253.15*${_u_temperature} variable temp_converted equal 253.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 253.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "253.15 - 0.2" variable T_up equal "253.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 9 ghost atom cutoff = 9 binsize = 4.5, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 9 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -14774.269 -14774.269 -14905.125 -14905.125 253.15 253.15 74656.674 74656.674 1872.1782 1872.1782 1000 -14618.701 -14618.701 -14757.705 -14757.705 268.91305 268.91305 77914.942 77914.942 -231.1768 -231.1768 Loop time of 23.7443 on 1 procs for 1000 steps with 4000 atoms Performance: 3.639 ns/day, 6.596 hours/ns, 42.115 timesteps/s 58.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 23.044 | 23.044 | 23.044 | 0.0 | 97.05 Neigh | 0.19541 | 0.19541 | 0.19541 | 0.0 | 0.82 Comm | 0.095811 | 0.095811 | 0.095811 | 0.0 | 0.40 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.36791 | 0.36791 | 0.36791 | 0.0 | 1.55 Other | | 0.0414 | | | 0.17 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8191 ave 8191 max 8191 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 615280 ave 615280 max 615280 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 615280 Ave neighs/atom = 153.82 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -14618.701 -14618.701 -14757.705 -14757.705 268.91305 268.91305 77914.942 77914.942 -231.1768 -231.1768 2000 -14635.449 -14635.449 -14763.18 -14763.18 247.10417 247.10417 77698.8 77698.8 95.736793 95.736793 Loop time of 20.9079 on 1 procs for 1000 steps with 4000 atoms Performance: 4.132 ns/day, 5.808 hours/ns, 47.829 timesteps/s 66.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 20.089 | 20.089 | 20.089 | 0.0 | 96.08 Neigh | 0.29304 | 0.29304 | 0.29304 | 0.0 | 1.40 Comm | 0.13529 | 0.13529 | 0.13529 | 0.0 | 0.65 Output | 4.5061e-05 | 4.5061e-05 | 4.5061e-05 | 0.0 | 0.00 Modify | 0.36718 | 0.36718 | 0.36718 | 0.0 | 1.76 Other | | 0.02349 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8191 ave 8191 max 8191 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 617916 ave 617916 max 617916 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 617916 Ave neighs/atom = 154.479 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -14635.449 -14635.449 -14763.18 -14763.18 247.10417 247.10417 77698.8 77698.8 95.736793 95.736793 3000 -14627.812 -14627.812 -14760.857 -14760.857 257.38338 257.38338 77732.477 77732.477 263.14297 263.14297 Loop time of 21.7783 on 1 procs for 1000 steps with 4000 atoms Performance: 3.967 ns/day, 6.050 hours/ns, 45.917 timesteps/s 64.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 21.103 | 21.103 | 21.103 | 0.0 | 96.90 Neigh | 0.25144 | 0.25144 | 0.25144 | 0.0 | 1.15 Comm | 0.075526 | 0.075526 | 0.075526 | 0.0 | 0.35 Output | 4.4107e-05 | 4.4107e-05 | 4.4107e-05 | 0.0 | 0.00 Modify | 0.22714 | 0.22714 | 0.22714 | 0.0 | 1.04 Other | | 0.1209 | | | 0.55 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8193 ave 8193 max 8193 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 617204 ave 617204 max 617204 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 617204 Ave neighs/atom = 154.301 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -14627.812 -14627.812 -14760.857 -14760.857 257.38338 257.38338 77732.477 77732.477 263.14297 263.14297 4000 -14632.819 -14632.819 -14763.956 -14763.956 253.69185 253.69185 77611.718 77611.718 511.54828 511.54828 Loop time of 20.4731 on 1 procs for 1000 steps with 4000 atoms Performance: 4.220 ns/day, 5.687 hours/ns, 48.845 timesteps/s 68.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 19.933 | 19.933 | 19.933 | 0.0 | 97.36 Neigh | 0.19534 | 0.19534 | 0.19534 | 0.0 | 0.95 Comm | 0.11534 | 0.11534 | 0.11534 | 0.0 | 0.56 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.20843 | 0.20843 | 0.20843 | 0.0 | 1.02 Other | | 0.02079 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8193 ave 8193 max 8193 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 616840 ave 616840 max 616840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 616840 Ave neighs/atom = 154.21 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -14632.819 -14632.819 -14763.956 -14763.956 253.69185 253.69185 77611.718 77611.718 511.54828 511.54828 5000 -14630.995 -14630.995 -14763.689 -14763.689 256.70551 256.70551 77725.604 77725.604 -15.084981 -15.084981 Loop time of 18.8973 on 1 procs for 1000 steps with 4000 atoms Performance: 4.572 ns/day, 5.249 hours/ns, 52.917 timesteps/s 73.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 18.309 | 18.309 | 18.309 | 0.0 | 96.89 Neigh | 0.29414 | 0.29414 | 0.29414 | 0.0 | 1.56 Comm | 0.055597 | 0.055597 | 0.055597 | 0.0 | 0.29 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.19805 | 0.19805 | 0.19805 | 0.0 | 1.05 Other | | 0.04057 | | | 0.21 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8191 ave 8191 max 8191 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 616694 ave 616694 max 616694 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 616694 Ave neighs/atom = 154.173 Neighbor list builds = 10 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 251.625147795141, Press = -146.110333442625 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -14630.995 -14630.995 -14763.689 -14763.689 256.70551 256.70551 77725.604 77725.604 -15.084981 -15.084981 6000 -14628.3 -14628.3 -14758.856 -14758.856 252.56936 252.56936 77749.336 77749.336 268.64862 268.64862 Loop time of 19.8395 on 1 procs for 1000 steps with 4000 atoms Performance: 4.355 ns/day, 5.511 hours/ns, 50.404 timesteps/s 70.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 19.197 | 19.197 | 19.197 | 0.0 | 96.76 Neigh | 0.25477 | 0.25477 | 0.25477 | 0.0 | 1.28 Comm | 0.07542 | 0.07542 | 0.07542 | 0.0 | 0.38 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.29193 | 0.29193 | 0.29193 | 0.0 | 1.47 Other | | 0.02083 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8192 ave 8192 max 8192 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 616990 ave 616990 max 616990 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 616990 Ave neighs/atom = 154.248 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.290689627418, Press = 0.357150626111793 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -14628.3 -14628.3 -14758.856 -14758.856 252.56936 252.56936 77749.336 77749.336 268.64862 268.64862 7000 -14631.094 -14631.094 -14761.609 -14761.609 252.48911 252.48911 77667.184 77667.184 403.8429 403.8429 Loop time of 25.759 on 1 procs for 1000 steps with 4000 atoms Performance: 3.354 ns/day, 7.155 hours/ns, 38.821 timesteps/s 54.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.906 | 24.906 | 24.906 | 0.0 | 96.69 Neigh | 0.30398 | 0.30398 | 0.30398 | 0.0 | 1.18 Comm | 0.096454 | 0.096454 | 0.096454 | 0.0 | 0.37 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.43157 | 0.43157 | 0.43157 | 0.0 | 1.68 Other | | 0.02102 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8194 ave 8194 max 8194 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 616582 ave 616582 max 616582 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 616582 Ave neighs/atom = 154.145 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.290639496383, Press = -4.98648187142565 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -14631.094 -14631.094 -14761.609 -14761.609 252.48911 252.48911 77667.184 77667.184 403.8429 403.8429 8000 -14633.896 -14633.896 -14764.04 -14764.04 251.77334 251.77334 77731.209 77731.209 -151.13039 -151.13039 Loop time of 29.7333 on 1 procs for 1000 steps with 4000 atoms Performance: 2.906 ns/day, 8.259 hours/ns, 33.632 timesteps/s 46.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.041 | 29.041 | 29.041 | 0.0 | 97.67 Neigh | 0.28699 | 0.28699 | 0.28699 | 0.0 | 0.97 Comm | 0.094984 | 0.094984 | 0.094984 | 0.0 | 0.32 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.24994 | 0.24994 | 0.24994 | 0.0 | 0.84 Other | | 0.06064 | | | 0.20 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8193 ave 8193 max 8193 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 616620 ave 616620 max 616620 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 616620 Ave neighs/atom = 154.155 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.125593040705, Press = -7.34665526287568 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -14633.896 -14633.896 -14764.04 -14764.04 251.77334 251.77334 77731.209 77731.209 -151.13039 -151.13039 9000 -14627.88 -14627.88 -14761.269 -14761.269 258.05135 258.05135 77747.354 77747.354 108.24087 108.24087 Loop time of 28.7127 on 1 procs for 1000 steps with 4000 atoms Performance: 3.009 ns/day, 7.976 hours/ns, 34.828 timesteps/s 48.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.839 | 27.839 | 27.839 | 0.0 | 96.96 Neigh | 0.30773 | 0.30773 | 0.30773 | 0.0 | 1.07 Comm | 0.11602 | 0.11602 | 0.11602 | 0.0 | 0.40 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.40922 | 0.40922 | 0.40922 | 0.0 | 1.43 Other | | 0.04118 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8192 ave 8192 max 8192 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 616232 ave 616232 max 616232 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 616232 Ave neighs/atom = 154.058 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.128997282446, Press = -6.77658103276213 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -14627.88 -14627.88 -14761.269 -14761.269 258.05135 258.05135 77747.354 77747.354 108.24087 108.24087 10000 -14631.723 -14631.723 -14764.096 -14764.096 256.08364 256.08364 77820.852 77820.852 -486.6931 -486.6931 Loop time of 30.4052 on 1 procs for 1000 steps with 4000 atoms Performance: 2.842 ns/day, 8.446 hours/ns, 32.889 timesteps/s 46.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.317 | 29.317 | 29.317 | 0.0 | 96.42 Neigh | 0.33167 | 0.33167 | 0.33167 | 0.0 | 1.09 Comm | 0.15554 | 0.15554 | 0.15554 | 0.0 | 0.51 Output | 5.3167e-05 | 5.3167e-05 | 5.3167e-05 | 0.0 | 0.00 Modify | 0.49943 | 0.49943 | 0.49943 | 0.0 | 1.64 Other | | 0.1013 | | | 0.33 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8192 ave 8192 max 8192 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 616074 ave 616074 max 616074 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 616074 Ave neighs/atom = 154.018 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.270165923586, Press = -4.90118527446274 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -14631.723 -14631.723 -14764.096 -14764.096 256.08364 256.08364 77820.852 77820.852 -486.6931 -486.6931 11000 -14629.127 -14629.127 -14759.088 -14759.088 251.41887 251.41887 77835.277 77835.277 -246.39409 -246.39409 Loop time of 31.7204 on 1 procs for 1000 steps with 4000 atoms Performance: 2.724 ns/day, 8.811 hours/ns, 31.525 timesteps/s 44.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.824 | 30.824 | 30.824 | 0.0 | 97.18 Neigh | 0.32455 | 0.32455 | 0.32455 | 0.0 | 1.02 Comm | 0.11512 | 0.11512 | 0.11512 | 0.0 | 0.36 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.41579 | 0.41579 | 0.41579 | 0.0 | 1.31 Other | | 0.04058 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8188 ave 8188 max 8188 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 615880 ave 615880 max 615880 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 615880 Ave neighs/atom = 153.97 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.34664653192, Press = -4.16255724413209 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -14629.127 -14629.127 -14759.088 -14759.088 251.41887 251.41887 77835.277 77835.277 -246.39409 -246.39409 12000 -14631.163 -14631.163 -14761.821 -14761.821 252.76689 252.76689 77922.014 77922.014 -807.90716 -807.90716 Loop time of 28.3496 on 1 procs for 1000 steps with 4000 atoms Performance: 3.048 ns/day, 7.875 hours/ns, 35.274 timesteps/s 49.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.598 | 27.598 | 27.598 | 0.0 | 97.35 Neigh | 0.3649 | 0.3649 | 0.3649 | 0.0 | 1.29 Comm | 0.095915 | 0.095915 | 0.095915 | 0.0 | 0.34 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.25018 | 0.25018 | 0.25018 | 0.0 | 0.88 Other | | 0.04052 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8187 ave 8187 max 8187 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 617684 ave 617684 max 617684 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 617684 Ave neighs/atom = 154.421 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.423520759099, Press = -2.17109142070234 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -14631.163 -14631.163 -14761.821 -14761.821 252.76689 252.76689 77922.014 77922.014 -807.90716 -807.90716 13000 -14629.015 -14629.015 -14759.17 -14759.17 251.79389 251.79389 77882.67 77882.67 -368.34643 -368.34643 Loop time of 27.0971 on 1 procs for 1000 steps with 4000 atoms Performance: 3.189 ns/day, 7.527 hours/ns, 36.904 timesteps/s 51.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.148 | 26.148 | 26.148 | 0.0 | 96.50 Neigh | 0.33372 | 0.33372 | 0.33372 | 0.0 | 1.23 Comm | 0.094897 | 0.094897 | 0.094897 | 0.0 | 0.35 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.4794 | 0.4794 | 0.4794 | 0.0 | 1.77 Other | | 0.04072 | | | 0.15 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8190 ave 8190 max 8190 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 616856 ave 616856 max 616856 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 616856 Ave neighs/atom = 154.214 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.357180600483, Press = -0.302693009297595 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -14629.015 -14629.015 -14759.17 -14759.17 251.79389 251.79389 77882.67 77882.67 -368.34643 -368.34643 14000 -14631.663 -14631.663 -14761.178 -14761.178 250.55463 250.55463 77822.035 77822.035 -313.11087 -313.11087 Loop time of 27.8865 on 1 procs for 1000 steps with 4000 atoms Performance: 3.098 ns/day, 7.746 hours/ns, 35.860 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.11 | 27.11 | 27.11 | 0.0 | 97.21 Neigh | 0.35127 | 0.35127 | 0.35127 | 0.0 | 1.26 Comm | 0.11503 | 0.11503 | 0.11503 | 0.0 | 0.41 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.28926 | 0.28926 | 0.28926 | 0.0 | 1.04 Other | | 0.0212 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8182 ave 8182 max 8182 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 616272 ave 616272 max 616272 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 616272 Ave neighs/atom = 154.068 Neighbor list builds = 10 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.37811843719, Press = 0.66470618333516 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -14631.663 -14631.663 -14761.178 -14761.178 250.55463 250.55463 77822.035 77822.035 -313.11087 -313.11087 15000 -14634.585 -14634.585 -14762.635 -14762.635 247.72077 247.72077 77806.195 77806.195 -376.76203 -376.76203 Loop time of 28.0163 on 1 procs for 1000 steps with 4000 atoms Performance: 3.084 ns/day, 7.782 hours/ns, 35.694 timesteps/s 49.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.152 | 27.152 | 27.152 | 0.0 | 96.91 Neigh | 0.3186 | 0.3186 | 0.3186 | 0.0 | 1.14 Comm | 0.07513 | 0.07513 | 0.07513 | 0.0 | 0.27 Output | 4.8161e-05 | 4.8161e-05 | 4.8161e-05 | 0.0 | 0.00 Modify | 0.45037 | 0.45037 | 0.45037 | 0.0 | 1.61 Other | | 0.02054 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8190 ave 8190 max 8190 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 617200 ave 617200 max 617200 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 617200 Ave neighs/atom = 154.3 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.242336308421, Press = 3.23568852991499 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -14634.585 -14634.585 -14762.635 -14762.635 247.72077 247.72077 77806.195 77806.195 -376.76203 -376.76203 16000 -14628.499 -14628.499 -14760.821 -14760.821 255.9864 255.9864 77796.093 77796.093 -73.082921 -73.082921 Loop time of 25.2022 on 1 procs for 1000 steps with 4000 atoms Performance: 3.428 ns/day, 7.001 hours/ns, 39.679 timesteps/s 55.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.34 | 24.34 | 24.34 | 0.0 | 96.58 Neigh | 0.30221 | 0.30221 | 0.30221 | 0.0 | 1.20 Comm | 0.074999 | 0.074999 | 0.074999 | 0.0 | 0.30 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.42406 | 0.42406 | 0.42406 | 0.0 | 1.68 Other | | 0.06079 | | | 0.24 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8190 ave 8190 max 8190 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 617074 ave 617074 max 617074 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 617074 Ave neighs/atom = 154.268 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.205017777659, Press = 0.581007696987836 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -14628.499 -14628.499 -14760.821 -14760.821 255.9864 255.9864 77796.093 77796.093 -73.082921 -73.082921 17000 -14634.675 -14634.675 -14764.082 -14764.082 250.34647 250.34647 77619.787 77619.787 434.62788 434.62788 Loop time of 22.4429 on 1 procs for 1000 steps with 4000 atoms Performance: 3.850 ns/day, 6.234 hours/ns, 44.557 timesteps/s 62.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 21.827 | 21.827 | 21.827 | 0.0 | 97.26 Neigh | 0.27025 | 0.27025 | 0.27025 | 0.0 | 1.20 Comm | 0.05474 | 0.05474 | 0.05474 | 0.0 | 0.24 Output | 2.6226e-05 | 2.6226e-05 | 2.6226e-05 | 0.0 | 0.00 Modify | 0.27056 | 0.27056 | 0.27056 | 0.0 | 1.21 Other | | 0.02036 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8183 ave 8183 max 8183 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 617702 ave 617702 max 617702 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 617702 Ave neighs/atom = 154.425 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.131124681108, Press = -0.612656068734225 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -14634.675 -14634.675 -14764.082 -14764.082 250.34647 250.34647 77619.787 77619.787 434.62788 434.62788 18000 -14630.415 -14630.415 -14763.736 -14763.736 257.91842 257.91842 77610.093 77610.093 493.78523 493.78523 Loop time of 24.4469 on 1 procs for 1000 steps with 4000 atoms Performance: 3.534 ns/day, 6.791 hours/ns, 40.905 timesteps/s 57.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 23.753 | 23.753 | 23.753 | 0.0 | 97.16 Neigh | 0.28105 | 0.28105 | 0.28105 | 0.0 | 1.15 Comm | 0.075306 | 0.075306 | 0.075306 | 0.0 | 0.31 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.29663 | 0.29663 | 0.29663 | 0.0 | 1.21 Other | | 0.0407 | | | 0.17 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 617450 ave 617450 max 617450 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 617450 Ave neighs/atom = 154.363 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.100085745075, Press = -0.598203505952508 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -14630.415 -14630.415 -14763.736 -14763.736 257.91842 257.91842 77610.093 77610.093 493.78523 493.78523 19000 -14629.995 -14629.995 -14761.544 -14761.544 254.49035 254.49035 77710.115 77710.115 268.15398 268.15398 Loop time of 24.0506 on 1 procs for 1000 steps with 4000 atoms Performance: 3.592 ns/day, 6.681 hours/ns, 41.579 timesteps/s 57.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 23.355 | 23.355 | 23.355 | 0.0 | 97.11 Neigh | 0.2892 | 0.2892 | 0.2892 | 0.0 | 1.20 Comm | 0.094753 | 0.094753 | 0.094753 | 0.0 | 0.39 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.25054 | 0.25054 | 0.25054 | 0.0 | 1.04 Other | | 0.06061 | | | 0.25 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8186 ave 8186 max 8186 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 616756 ave 616756 max 616756 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 616756 Ave neighs/atom = 154.189 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.086409967667, Press = -0.797496679364106 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -14629.995 -14629.995 -14761.544 -14761.544 254.49035 254.49035 77710.115 77710.115 268.15398 268.15398 20000 -14630.515 -14630.515 -14761.589 -14761.589 253.57054 253.57054 77782.243 77782.243 -124.93968 -124.93968 Loop time of 24.0019 on 1 procs for 1000 steps with 4000 atoms Performance: 3.600 ns/day, 6.667 hours/ns, 41.663 timesteps/s 58.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 23.224 | 23.224 | 23.224 | 0.0 | 96.76 Neigh | 0.32897 | 0.32897 | 0.32897 | 0.0 | 1.37 Comm | 0.13842 | 0.13842 | 0.13842 | 0.0 | 0.58 Output | 5.0068e-05 | 5.0068e-05 | 5.0068e-05 | 0.0 | 0.00 Modify | 0.2698 | 0.2698 | 0.2698 | 0.0 | 1.12 Other | | 0.04061 | | | 0.17 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8183 ave 8183 max 8183 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 616776 ave 616776 max 616776 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 616776 Ave neighs/atom = 154.194 Neighbor list builds = 10 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.038862605545, Press = -0.691004703186565 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -14630.515 -14630.515 -14761.589 -14761.589 253.57054 253.57054 77782.243 77782.243 -124.93968 -124.93968 21000 -14634.477 -14634.477 -14763.062 -14763.062 248.75634 248.75634 77693.339 77693.339 184.79968 184.79968 Loop time of 17.8917 on 1 procs for 1000 steps with 4000 atoms Performance: 4.829 ns/day, 4.970 hours/ns, 55.892 timesteps/s 78.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.315 | 17.315 | 17.315 | 0.0 | 96.78 Neigh | 0.20878 | 0.20878 | 0.20878 | 0.0 | 1.17 Comm | 0.095375 | 0.095375 | 0.095375 | 0.0 | 0.53 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.21121 | 0.21121 | 0.21121 | 0.0 | 1.18 Other | | 0.06108 | | | 0.34 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8188 ave 8188 max 8188 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 616222 ave 616222 max 616222 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 616222 Ave neighs/atom = 154.055 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.990901315127, Press = -2.36243199047687 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -14634.477 -14634.477 -14763.062 -14763.062 248.75634 248.75634 77693.339 77693.339 184.79968 184.79968 22000 -14626.878 -14626.878 -14761.203 -14761.203 259.85944 259.85944 77805.992 77805.992 -164.37583 -164.37583 Loop time of 19.3982 on 1 procs for 1000 steps with 4000 atoms Performance: 4.454 ns/day, 5.388 hours/ns, 51.551 timesteps/s 72.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 18.838 | 18.838 | 18.838 | 0.0 | 97.11 Neigh | 0.19088 | 0.19088 | 0.19088 | 0.0 | 0.98 Comm | 0.074954 | 0.074954 | 0.074954 | 0.0 | 0.39 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.27341 | 0.27341 | 0.27341 | 0.0 | 1.41 Other | | 0.02092 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 615844 ave 615844 max 615844 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 615844 Ave neighs/atom = 153.961 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.968029450221, Press = -1.25577001705068 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -14626.878 -14626.878 -14761.203 -14761.203 259.85944 259.85944 77805.992 77805.992 -164.37583 -164.37583 23000 -14633.169 -14633.169 -14765.579 -14765.579 256.15652 256.15652 77730.435 77730.435 -183.05096 -183.05096 Loop time of 16.6691 on 1 procs for 1000 steps with 4000 atoms Performance: 5.183 ns/day, 4.630 hours/ns, 59.991 timesteps/s 83.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 16.217 | 16.217 | 16.217 | 0.0 | 97.29 Neigh | 0.1464 | 0.1464 | 0.1464 | 0.0 | 0.88 Comm | 0.054583 | 0.054583 | 0.054583 | 0.0 | 0.33 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.21029 | 0.21029 | 0.21029 | 0.0 | 1.26 Other | | 0.04064 | | | 0.24 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8191 ave 8191 max 8191 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 616238 ave 616238 max 616238 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 616238 Ave neighs/atom = 154.06 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.92934954016, Press = -2.57930748500172 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -14633.169 -14633.169 -14765.579 -14765.579 256.15652 256.15652 77730.435 77730.435 -183.05096 -183.05096 24000 -14633.033 -14633.033 -14762.113 -14762.113 249.71493 249.71493 77759.308 77759.308 -100.29334 -100.29334 Loop time of 17.2257 on 1 procs for 1000 steps with 4000 atoms Performance: 5.016 ns/day, 4.785 hours/ns, 58.053 timesteps/s 80.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 16.769 | 16.769 | 16.769 | 0.0 | 97.35 Neigh | 0.17078 | 0.17078 | 0.17078 | 0.0 | 0.99 Comm | 0.054462 | 0.054462 | 0.054462 | 0.0 | 0.32 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.21008 | 0.21008 | 0.21008 | 0.0 | 1.22 Other | | 0.02139 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8193 ave 8193 max 8193 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 617698 ave 617698 max 617698 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 617698 Ave neighs/atom = 154.424 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T253.15.out" else "print 'not_converged' file output/vol_T253.15.out" print '${V}' file output/vol_T253.15.out 77748.7654650133 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0