# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.210718545317654*${_u_distance} variable latticeconst_converted equal 4.210718545317654*1 lattice fcc ${latticeconst_converted} lattice fcc 4.21071854531765 Lattice spacing in x,y,z = 4.21072 4.21072 4.21072 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (42.1072 42.1072 42.1072) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000477076 secs variable mass_converted equal 26.981538*${_u_mass} variable mass_converted equal 26.981538*1 # specify which KIM Model to use pair_style kim EAM_Dynamo_SchopfBrommerFrigan_2012_AlMnPd__MO_137572817842_000 pair_coeff * * Al mass 1 ${mass_converted} mass 1 26.981538 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 74656.6742285268 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 74656.6742285268/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 74656.6742285268/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 74656.6742285268/(1*1*${_u_distance}) variable V0_metal equal 74656.6742285268/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 74656.6742285268*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 74656.6742285268 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 293.15*${_u_temperature} variable temp_converted equal 293.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 293.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "293.15 - 0.2" variable T_up equal "293.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 9 ghost atom cutoff = 9 binsize = 4.5, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 9 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -14753.592 -14753.592 -14905.125 -14905.125 293.15 293.15 74656.674 74656.674 2167.9974 2167.9974 1000 -14569.462 -14569.462 -14728.71 -14728.71 308.07725 308.07725 78665.816 78665.816 -662.67242 -662.67242 Loop time of 21.1911 on 1 procs for 1000 steps with 4000 atoms Performance: 4.077 ns/day, 5.886 hours/ns, 47.190 timesteps/s 65.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 20.495 | 20.495 | 20.495 | 0.0 | 96.71 Neigh | 0.21109 | 0.21109 | 0.21109 | 0.0 | 1.00 Comm | 0.11566 | 0.11566 | 0.11566 | 0.0 | 0.55 Output | 4.4107e-05 | 4.4107e-05 | 4.4107e-05 | 0.0 | 0.00 Modify | 0.28859 | 0.28859 | 0.28859 | 0.0 | 1.36 Other | | 0.08089 | | | 0.38 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8183 ave 8183 max 8183 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 610760 ave 610760 max 610760 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 610760 Ave neighs/atom = 152.69 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -14569.462 -14569.462 -14728.71 -14728.71 308.07725 308.07725 78665.816 78665.816 -662.67242 -662.67242 2000 -14586.136 -14586.136 -14735.54 -14735.54 289.03238 289.03238 78302.647 78302.647 241.8981 241.8981 Loop time of 20.1255 on 1 procs for 1000 steps with 4000 atoms Performance: 4.293 ns/day, 5.590 hours/ns, 49.688 timesteps/s 68.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 19.421 | 19.421 | 19.421 | 0.0 | 96.50 Neigh | 0.35232 | 0.35232 | 0.35232 | 0.0 | 1.75 Comm | 0.075602 | 0.075602 | 0.075602 | 0.0 | 0.38 Output | 4.4107e-05 | 4.4107e-05 | 4.4107e-05 | 0.0 | 0.00 Modify | 0.25612 | 0.25612 | 0.25612 | 0.0 | 1.27 Other | | 0.02055 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8179 ave 8179 max 8179 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 613366 ave 613366 max 613366 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 613366 Ave neighs/atom = 153.341 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -14586.136 -14586.136 -14735.54 -14735.54 289.03238 289.03238 78302.647 78302.647 241.8981 241.8981 3000 -14582.551 -14582.551 -14736.353 -14736.353 297.54105 297.54105 78329.942 78329.942 95.647801 95.647801 Loop time of 20.4473 on 1 procs for 1000 steps with 4000 atoms Performance: 4.225 ns/day, 5.680 hours/ns, 48.906 timesteps/s 68.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 19.761 | 19.761 | 19.761 | 0.0 | 96.64 Neigh | 0.32291 | 0.32291 | 0.32291 | 0.0 | 1.58 Comm | 0.074798 | 0.074798 | 0.074798 | 0.0 | 0.37 Output | 4.4107e-05 | 4.4107e-05 | 4.4107e-05 | 0.0 | 0.00 Modify | 0.26841 | 0.26841 | 0.26841 | 0.0 | 1.31 Other | | 0.0206 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8174 ave 8174 max 8174 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 612568 ave 612568 max 612568 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 612568 Ave neighs/atom = 153.142 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -14582.551 -14582.551 -14736.353 -14736.353 297.54105 297.54105 78329.942 78329.942 95.647801 95.647801 4000 -14583.755 -14583.755 -14735.575 -14735.575 293.70649 293.70649 78345.056 78345.056 77.968037 77.968037 Loop time of 21.2951 on 1 procs for 1000 steps with 4000 atoms Performance: 4.057 ns/day, 5.915 hours/ns, 46.959 timesteps/s 65.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 20.751 | 20.751 | 20.751 | 0.0 | 97.45 Neigh | 0.23025 | 0.23025 | 0.23025 | 0.0 | 1.08 Comm | 0.055483 | 0.055483 | 0.055483 | 0.0 | 0.26 Output | 3.8862e-05 | 3.8862e-05 | 3.8862e-05 | 0.0 | 0.00 Modify | 0.23777 | 0.23777 | 0.23777 | 0.0 | 1.12 Other | | 0.02052 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8173 ave 8173 max 8173 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 612322 ave 612322 max 612322 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 612322 Ave neighs/atom = 153.081 Neighbor list builds = 10 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -14583.755 -14583.755 -14735.575 -14735.575 293.70649 293.70649 78345.056 78345.056 77.968037 77.968037 5000 -14586.338 -14586.338 -14737.671 -14737.671 292.76283 292.76283 78387.798 78387.798 -352.92028 -352.92028 Loop time of 21.1238 on 1 procs for 1000 steps with 4000 atoms Performance: 4.090 ns/day, 5.868 hours/ns, 47.340 timesteps/s 65.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 20.359 | 20.359 | 20.359 | 0.0 | 96.38 Neigh | 0.31176 | 0.31176 | 0.31176 | 0.0 | 1.48 Comm | 0.13531 | 0.13531 | 0.13531 | 0.0 | 0.64 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.29704 | 0.29704 | 0.29704 | 0.0 | 1.41 Other | | 0.02056 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8181 ave 8181 max 8181 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 612182 ave 612182 max 612182 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 612182 Ave neighs/atom = 153.046 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 290.368736700758, Press = -134.875777926931 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -14586.338 -14586.338 -14737.671 -14737.671 292.76283 292.76283 78387.798 78387.798 -352.92028 -352.92028 6000 -14585.146 -14585.146 -14739.627 -14739.627 298.85454 298.85454 78205.749 78205.749 311.22225 311.22225 Loop time of 21.4645 on 1 procs for 1000 steps with 4000 atoms Performance: 4.025 ns/day, 5.962 hours/ns, 46.589 timesteps/s 64.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 20.838 | 20.838 | 20.838 | 0.0 | 97.08 Neigh | 0.25872 | 0.25872 | 0.25872 | 0.0 | 1.21 Comm | 0.075591 | 0.075591 | 0.075591 | 0.0 | 0.35 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.25117 | 0.25117 | 0.25117 | 0.0 | 1.17 Other | | 0.04075 | | | 0.19 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8172 ave 8172 max 8172 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 614050 ave 614050 max 614050 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 614050 Ave neighs/atom = 153.512 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.171926652151, Press = -3.68100283054622 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -14585.146 -14585.146 -14739.627 -14739.627 298.85454 298.85454 78205.749 78205.749 311.22225 311.22225 7000 -14588.68 -14588.68 -14737.972 -14737.972 288.81549 288.81549 78316.528 78316.528 -181.1082 -181.1082 Loop time of 27.3789 on 1 procs for 1000 steps with 4000 atoms Performance: 3.156 ns/day, 7.605 hours/ns, 36.524 timesteps/s 51.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.531 | 26.531 | 26.531 | 0.0 | 96.90 Neigh | 0.36786 | 0.36786 | 0.36786 | 0.0 | 1.34 Comm | 0.076144 | 0.076144 | 0.076144 | 0.0 | 0.28 Output | 2.718e-05 | 2.718e-05 | 2.718e-05 | 0.0 | 0.00 Modify | 0.38241 | 0.38241 | 0.38241 | 0.0 | 1.40 Other | | 0.02098 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8183 ave 8183 max 8183 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 612050 ave 612050 max 612050 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 612050 Ave neighs/atom = 153.012 Neighbor list builds = 10 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.923326020566, Press = -18.6885055557264 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -14588.68 -14588.68 -14737.972 -14737.972 288.81549 288.81549 78316.528 78316.528 -181.1082 -181.1082 8000 -14580.796 -14580.796 -14732.717 -14732.717 293.90181 293.90181 78514.139 78514.139 -441.96856 -441.96856 Loop time of 29.8121 on 1 procs for 1000 steps with 4000 atoms Performance: 2.898 ns/day, 8.281 hours/ns, 33.543 timesteps/s 46.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.82 | 28.82 | 28.82 | 0.0 | 96.67 Neigh | 0.39939 | 0.39939 | 0.39939 | 0.0 | 1.34 Comm | 0.11541 | 0.11541 | 0.11541 | 0.0 | 0.39 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.4169 | 0.4169 | 0.4169 | 0.0 | 1.40 Other | | 0.06074 | | | 0.20 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8168 ave 8168 max 8168 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 612402 ave 612402 max 612402 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 612402 Ave neighs/atom = 153.101 Neighbor list builds = 10 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.207532434597, Press = -0.604969542481102 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -14580.796 -14580.796 -14732.717 -14732.717 293.90181 293.90181 78514.139 78514.139 -441.96856 -441.96856 9000 -14588.043 -14588.043 -14738.219 -14738.219 290.52525 290.52525 78165.464 78165.464 715.96487 715.96487 Loop time of 29.7649 on 1 procs for 1000 steps with 4000 atoms Performance: 2.903 ns/day, 8.268 hours/ns, 33.597 timesteps/s 47.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.917 | 28.917 | 28.917 | 0.0 | 97.15 Neigh | 0.35086 | 0.35086 | 0.35086 | 0.0 | 1.18 Comm | 0.16567 | 0.16567 | 0.16567 | 0.0 | 0.56 Output | 5.4121e-05 | 5.4121e-05 | 5.4121e-05 | 0.0 | 0.00 Modify | 0.25025 | 0.25025 | 0.25025 | 0.0 | 0.84 Other | | 0.08075 | | | 0.27 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8173 ave 8173 max 8173 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 613042 ave 613042 max 613042 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 613042 Ave neighs/atom = 153.261 Neighbor list builds = 10 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.974848013754, Press = 1.04752629253523 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -14588.043 -14588.043 -14738.219 -14738.219 290.52525 290.52525 78165.464 78165.464 715.96487 715.96487 10000 -14585.348 -14585.348 -14736.064 -14736.064 291.56996 291.56996 78469.599 78469.599 -581.79518 -581.79518 Loop time of 29.3106 on 1 procs for 1000 steps with 4000 atoms Performance: 2.948 ns/day, 8.142 hours/ns, 34.117 timesteps/s 47.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.356 | 28.356 | 28.356 | 0.0 | 96.74 Neigh | 0.4554 | 0.4554 | 0.4554 | 0.0 | 1.55 Comm | 0.116 | 0.116 | 0.116 | 0.0 | 0.40 Output | 5.1022e-05 | 5.1022e-05 | 5.1022e-05 | 0.0 | 0.00 Modify | 0.34236 | 0.34236 | 0.34236 | 0.0 | 1.17 Other | | 0.04066 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8169 ave 8169 max 8169 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 612418 ave 612418 max 612418 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 612418 Ave neighs/atom = 153.105 Neighbor list builds = 10 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.078539179972, Press = -4.71464704426106 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -14585.348 -14585.348 -14736.064 -14736.064 291.56996 291.56996 78469.599 78469.599 -581.79518 -581.79518 11000 -14591.326 -14591.326 -14736.282 -14736.282 280.42755 280.42755 78309.696 78309.696 24.951966 24.951966 Loop time of 25.7077 on 1 procs for 1000 steps with 4000 atoms Performance: 3.361 ns/day, 7.141 hours/ns, 38.899 timesteps/s 54.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.907 | 24.907 | 24.907 | 0.0 | 96.89 Neigh | 0.32311 | 0.32311 | 0.32311 | 0.0 | 1.26 Comm | 0.11542 | 0.11542 | 0.11542 | 0.0 | 0.45 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.32031 | 0.32031 | 0.32031 | 0.0 | 1.25 Other | | 0.04137 | | | 0.16 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8178 ave 8178 max 8178 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 614038 ave 614038 max 614038 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 614038 Ave neighs/atom = 153.51 Neighbor list builds = 10 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.097001835365, Press = 1.33766555155329 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -14591.326 -14591.326 -14736.282 -14736.282 280.42755 280.42755 78309.696 78309.696 24.951966 24.951966 12000 -14583.646 -14583.646 -14737.675 -14737.675 297.98093 297.98093 78211.068 78211.068 416.661 416.661 Loop time of 28.6517 on 1 procs for 1000 steps with 4000 atoms Performance: 3.016 ns/day, 7.959 hours/ns, 34.902 timesteps/s 48.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.738 | 27.738 | 27.738 | 0.0 | 96.81 Neigh | 0.38159 | 0.38159 | 0.38159 | 0.0 | 1.33 Comm | 0.17577 | 0.17577 | 0.17577 | 0.0 | 0.61 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.33555 | 0.33555 | 0.33555 | 0.0 | 1.17 Other | | 0.02061 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8162 ave 8162 max 8162 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 613732 ave 613732 max 613732 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 613732 Ave neighs/atom = 153.433 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.929539709586, Press = -0.0738715813319797 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -14583.646 -14583.646 -14737.675 -14737.675 297.98093 297.98093 78211.068 78211.068 416.661 416.661 13000 -14583.255 -14583.255 -14733.528 -14733.528 290.71191 290.71191 78451.755 78451.755 -340.64258 -340.64258 Loop time of 28.6202 on 1 procs for 1000 steps with 4000 atoms Performance: 3.019 ns/day, 7.950 hours/ns, 34.940 timesteps/s 48.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.71 | 27.71 | 27.71 | 0.0 | 96.82 Neigh | 0.40325 | 0.40325 | 0.40325 | 0.0 | 1.41 Comm | 0.11548 | 0.11548 | 0.11548 | 0.0 | 0.40 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.32062 | 0.32062 | 0.32062 | 0.0 | 1.12 Other | | 0.07073 | | | 0.25 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8178 ave 8178 max 8178 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 612078 ave 612078 max 612078 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 612078 Ave neighs/atom = 153.019 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.11231949086, Press = -2.12817360241519 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -14583.255 -14583.255 -14733.528 -14733.528 290.71191 290.71191 78451.755 78451.755 -340.64258 -340.64258 14000 -14585.049 -14585.049 -14737.678 -14737.678 295.27089 295.27089 78329.099 78329.099 -90.994718 -90.994718 Loop time of 27.8552 on 1 procs for 1000 steps with 4000 atoms Performance: 3.102 ns/day, 7.738 hours/ns, 35.900 timesteps/s 49.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.938 | 26.938 | 26.938 | 0.0 | 96.71 Neigh | 0.38948 | 0.38948 | 0.38948 | 0.0 | 1.40 Comm | 0.095247 | 0.095247 | 0.095247 | 0.0 | 0.34 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.39168 | 0.39168 | 0.39168 | 0.0 | 1.41 Other | | 0.0405 | | | 0.15 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8172 ave 8172 max 8172 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 614086 ave 614086 max 614086 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 614086 Ave neighs/atom = 153.522 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.052392831375, Press = 2.82891686717327 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -14585.049 -14585.049 -14737.678 -14737.678 295.27089 295.27089 78329.099 78329.099 -90.994718 -90.994718 15000 -14579.172 -14579.172 -14732.961 -14732.961 297.51516 297.51516 78277.49 78277.49 660.4621 660.4621 Loop time of 27.4768 on 1 procs for 1000 steps with 4000 atoms Performance: 3.144 ns/day, 7.632 hours/ns, 36.394 timesteps/s 50.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.741 | 26.741 | 26.741 | 0.0 | 97.32 Neigh | 0.36948 | 0.36948 | 0.36948 | 0.0 | 1.34 Comm | 0.11538 | 0.11538 | 0.11538 | 0.0 | 0.42 Output | 3.4809e-05 | 3.4809e-05 | 3.4809e-05 | 0.0 | 0.00 Modify | 0.21057 | 0.21057 | 0.21057 | 0.0 | 0.77 Other | | 0.04064 | | | 0.15 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8170 ave 8170 max 8170 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 611868 ave 611868 max 611868 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 611868 Ave neighs/atom = 152.967 Neighbor list builds = 10 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.143668610343, Press = -1.8220728673612 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -14579.172 -14579.172 -14732.961 -14732.961 297.51516 297.51516 78277.49 78277.49 660.4621 660.4621 16000 -14583.102 -14583.102 -14735.602 -14735.602 295.0202 295.0202 78414.611 78414.611 -286.01654 -286.01654 Loop time of 24.4927 on 1 procs for 1000 steps with 4000 atoms Performance: 3.528 ns/day, 6.804 hours/ns, 40.828 timesteps/s 56.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 23.843 | 23.843 | 23.843 | 0.0 | 97.35 Neigh | 0.31303 | 0.31303 | 0.31303 | 0.0 | 1.28 Comm | 0.11541 | 0.11541 | 0.11541 | 0.0 | 0.47 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.20105 | 0.20105 | 0.20105 | 0.0 | 0.82 Other | | 0.02059 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8169 ave 8169 max 8169 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 611998 ave 611998 max 611998 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 611998 Ave neighs/atom = 153 Neighbor list builds = 10 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.160467235362, Press = -2.08887727060188 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -14583.102 -14583.102 -14735.602 -14735.602 295.0202 295.0202 78414.611 78414.611 -286.01654 -286.01654 17000 -14582.799 -14582.799 -14734.128 -14734.128 292.75633 292.75633 78403.262 78403.262 -154.19362 -154.19362 Loop time of 23.7306 on 1 procs for 1000 steps with 4000 atoms Performance: 3.641 ns/day, 6.592 hours/ns, 42.140 timesteps/s 58.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 22.999 | 22.999 | 22.999 | 0.0 | 96.92 Neigh | 0.30402 | 0.30402 | 0.30402 | 0.0 | 1.28 Comm | 0.13552 | 0.13552 | 0.13552 | 0.0 | 0.57 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.27188 | 0.27188 | 0.27188 | 0.0 | 1.15 Other | | 0.02055 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8147 ave 8147 max 8147 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 612894 ave 612894 max 612894 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 612894 Ave neighs/atom = 153.224 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.12708293219, Press = 1.18358529574925 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -14582.799 -14582.799 -14734.128 -14734.128 292.75633 292.75633 78403.262 78403.262 -154.19362 -154.19362 18000 -14583.638 -14583.638 -14739.232 -14739.232 301.00686 301.00686 78289.457 78289.457 -40.224357 -40.224357 Loop time of 23.5895 on 1 procs for 1000 steps with 4000 atoms Performance: 3.663 ns/day, 6.553 hours/ns, 42.392 timesteps/s 58.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 22.85 | 22.85 | 22.85 | 0.0 | 96.87 Neigh | 0.31151 | 0.31151 | 0.31151 | 0.0 | 1.32 Comm | 0.075169 | 0.075169 | 0.075169 | 0.0 | 0.32 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.33186 | 0.33186 | 0.33186 | 0.0 | 1.41 Other | | 0.02061 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8166 ave 8166 max 8166 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 614304 ave 614304 max 614304 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 614304 Ave neighs/atom = 153.576 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.104007866805, Press = 1.68727541250231 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -14583.638 -14583.638 -14739.232 -14739.232 301.00686 301.00686 78289.457 78289.457 -40.224357 -40.224357 19000 -14581.689 -14581.689 -14733.71 -14733.71 294.09458 294.09458 78306.442 78306.442 414.22782 414.22782 Loop time of 25.2857 on 1 procs for 1000 steps with 4000 atoms Performance: 3.417 ns/day, 7.024 hours/ns, 39.548 timesteps/s 55.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.352 | 24.352 | 24.352 | 0.0 | 96.31 Neigh | 0.40677 | 0.40677 | 0.40677 | 0.0 | 1.61 Comm | 0.095457 | 0.095457 | 0.095457 | 0.0 | 0.38 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.33033 | 0.33033 | 0.33033 | 0.0 | 1.31 Other | | 0.101 | | | 0.40 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8166 ave 8166 max 8166 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 613262 ave 613262 max 613262 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 613262 Ave neighs/atom = 153.315 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.211720422026, Press = -1.26348277631887 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -14581.689 -14581.689 -14733.71 -14733.71 294.09458 294.09458 78306.442 78306.442 414.22782 414.22782 20000 -14582.216 -14582.216 -14732.817 -14732.817 291.34797 291.34797 78331.503 78331.503 308.08341 308.08341 Loop time of 22.3828 on 1 procs for 1000 steps with 4000 atoms Performance: 3.860 ns/day, 6.217 hours/ns, 44.677 timesteps/s 62.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 21.711 | 21.711 | 21.711 | 0.0 | 97.00 Neigh | 0.28482 | 0.28482 | 0.28482 | 0.0 | 1.27 Comm | 0.095163 | 0.095163 | 0.095163 | 0.0 | 0.43 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.2713 | 0.2713 | 0.2713 | 0.0 | 1.21 Other | | 0.02042 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8180 ave 8180 max 8180 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 612116 ave 612116 max 612116 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 612116 Ave neighs/atom = 153.029 Neighbor list builds = 10 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.225749854678, Press = -0.759355013640301 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -14582.216 -14582.216 -14732.817 -14732.817 291.34797 291.34797 78331.503 78331.503 308.08341 308.08341 21000 -14586.074 -14586.074 -14737.303 -14737.303 292.56293 292.56293 78262.01 78262.01 300.73224 300.73224 Loop time of 20.7157 on 1 procs for 1000 steps with 4000 atoms Performance: 4.171 ns/day, 5.754 hours/ns, 48.273 timesteps/s 67.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 20.092 | 20.092 | 20.092 | 0.0 | 96.99 Neigh | 0.26626 | 0.26626 | 0.26626 | 0.0 | 1.29 Comm | 0.095487 | 0.095487 | 0.095487 | 0.0 | 0.46 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.24173 | 0.24173 | 0.24173 | 0.0 | 1.17 Other | | 0.02044 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8179 ave 8179 max 8179 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 613904 ave 613904 max 613904 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 613904 Ave neighs/atom = 153.476 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.165134010786, Press = 2.04229235833547 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -14586.074 -14586.074 -14737.303 -14737.303 292.56293 292.56293 78262.01 78262.01 300.73224 300.73224 22000 -14580.366 -14580.366 -14734.722 -14734.722 298.61249 298.61249 78395.522 78395.522 -91.660003 -91.660003 Loop time of 20.3138 on 1 procs for 1000 steps with 4000 atoms Performance: 4.253 ns/day, 5.643 hours/ns, 49.228 timesteps/s 68.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 19.686 | 19.686 | 19.686 | 0.0 | 96.91 Neigh | 0.2813 | 0.2813 | 0.2813 | 0.0 | 1.38 Comm | 0.095262 | 0.095262 | 0.095262 | 0.0 | 0.47 Output | 3.4809e-05 | 3.4809e-05 | 3.4809e-05 | 0.0 | 0.00 Modify | 0.23087 | 0.23087 | 0.23087 | 0.0 | 1.14 Other | | 0.02054 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8179 ave 8179 max 8179 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 612052 ave 612052 max 612052 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 612052 Ave neighs/atom = 153.013 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.181142732301, Press = -2.09814357256175 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -14580.366 -14580.366 -14734.722 -14734.722 298.61249 298.61249 78395.522 78395.522 -91.660003 -91.660003 23000 -14587.358 -14587.358 -14738.544 -14738.544 292.47954 292.47954 78473.509 78473.509 -999.22641 -999.22641 Loop time of 16.6867 on 1 procs for 1000 steps with 4000 atoms Performance: 5.178 ns/day, 4.635 hours/ns, 59.928 timesteps/s 83.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 16.097 | 16.097 | 16.097 | 0.0 | 96.46 Neigh | 0.28165 | 0.28165 | 0.28165 | 0.0 | 1.69 Comm | 0.095696 | 0.095696 | 0.095696 | 0.0 | 0.57 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.19209 | 0.19209 | 0.19209 | 0.0 | 1.15 Other | | 0.02076 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8178 ave 8178 max 8178 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 612340 ave 612340 max 612340 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 612340 Ave neighs/atom = 153.085 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.219479761107, Press = 0.91271597023241 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -14587.358 -14587.358 -14738.544 -14738.544 292.47954 292.47954 78473.509 78473.509 -999.22641 -999.22641 24000 -14582.795 -14582.795 -14735.134 -14735.134 294.70962 294.70962 78249.714 78249.714 553.62104 553.62104 Loop time of 15.7222 on 1 procs for 1000 steps with 4000 atoms Performance: 5.495 ns/day, 4.367 hours/ns, 63.604 timesteps/s 87.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 15.187 | 15.187 | 15.187 | 0.0 | 96.59 Neigh | 0.26991 | 0.26991 | 0.26991 | 0.0 | 1.72 Comm | 0.054968 | 0.054968 | 0.054968 | 0.0 | 0.35 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.1902 | 0.1902 | 0.1902 | 0.0 | 1.21 Other | | 0.02048 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8171 ave 8171 max 8171 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 613864 ave 613864 max 613864 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 613864 Ave neighs/atom = 153.466 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.200940314693, Press = 0.640340055706763 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -14582.795 -14582.795 -14735.134 -14735.134 294.70962 294.70962 78249.714 78249.714 553.62104 553.62104 25000 -14585.663 -14585.663 -14736.381 -14736.381 291.57551 291.57551 78350.056 78350.056 -94.638855 -94.638855 Loop time of 16.1072 on 1 procs for 1000 steps with 4000 atoms Performance: 5.364 ns/day, 4.474 hours/ns, 62.084 timesteps/s 85.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 15.534 | 15.534 | 15.534 | 0.0 | 96.44 Neigh | 0.24785 | 0.24785 | 0.24785 | 0.0 | 1.54 Comm | 0.094764 | 0.094764 | 0.094764 | 0.0 | 0.59 Output | 3.4809e-05 | 3.4809e-05 | 3.4809e-05 | 0.0 | 0.00 Modify | 0.18984 | 0.18984 | 0.18984 | 0.0 | 1.18 Other | | 0.04028 | | | 0.25 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8160 ave 8160 max 8160 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 612472 ave 612472 max 612472 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 612472 Ave neighs/atom = 153.118 Neighbor list builds = 10 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.25280759814, Press = -0.97478764223186 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.243 | 6.243 | 6.243 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -14585.663 -14585.663 -14736.381 -14736.381 291.57551 291.57551 78350.056 78350.056 -94.638855 -94.638855 26000 -14583.684 -14583.684 -14736.504 -14736.504 295.64006 295.64006 78462.7 78462.7 -708.04608 -708.04608 Loop time of 15.1284 on 1 procs for 1000 steps with 4000 atoms Performance: 5.711 ns/day, 4.202 hours/ns, 66.101 timesteps/s 92.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 14.655 | 14.655 | 14.655 | 0.0 | 96.87 Neigh | 0.17481 | 0.17481 | 0.17481 | 0.0 | 1.16 Comm | 0.076791 | 0.076791 | 0.076791 | 0.0 | 0.51 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.20153 | 0.20153 | 0.20153 | 0.0 | 1.33 Other | | 0.02053 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8156 ave 8156 max 8156 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 612792 ave 612792 max 612792 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 612792 Ave neighs/atom = 153.198 Neighbor list builds = 10 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T293.15.out" else "print 'not_converged' file output/vol_T293.15.out" print '${V}' file output/vol_T293.15.out 78352.661366253 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0