# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.049696564674378*${_u_distance} variable latticeconst_converted equal 4.049696564674378*1 lattice fcc ${latticeconst_converted} lattice fcc 4.04969656467438 Lattice spacing in x,y,z = 4.0497 4.0497 4.0497 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (40.497 40.497 40.497) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000339031 secs variable mass_converted equal 26.981538*${_u_mass} variable mass_converted equal 26.981538*1 # specify which KIM Model to use pair_style kim EAM_Dynamo_VailheFarkas_1997_CoAl__MO_284963179498_005 pair_coeff * * Al mass 1 ${mass_converted} mass 1 26.981538 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 66415.1948248735 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 66415.1948248735/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 66415.1948248735/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 66415.1948248735/(1*1*${_u_distance}) variable V0_metal equal 66415.1948248735/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 66415.1948248735*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 66415.1948248735 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.60004 ghost atom cutoff = 7.60004 binsize = 3.80002, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.60004 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -13311.961 -13311.961 -13473.832 -13473.832 313.15 313.15 66415.195 66415.195 2603.2428 2603.2428 1000 -13121.134 -13121.134 -13288.103 -13288.103 323.01278 323.01278 68791.903 68791.903 -41.020398 -41.020398 Loop time of 20.1436 on 1 procs for 1000 steps with 4000 atoms Performance: 4.289 ns/day, 5.595 hours/ns, 49.644 timesteps/s 46.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 19.428 | 19.428 | 19.428 | 0.0 | 96.45 Neigh | 0.080532 | 0.080532 | 0.080532 | 0.0 | 0.40 Comm | 0.079963 | 0.079963 | 0.079963 | 0.0 | 0.40 Output | 3.7909e-05 | 3.7909e-05 | 3.7909e-05 | 0.0 | 0.00 Modify | 0.4747 | 0.4747 | 0.4747 | 0.0 | 2.36 Other | | 0.07993 | | | 0.40 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 411164 ave 411164 max 411164 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 411164 Ave neighs/atom = 102.791 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -13121.134 -13121.134 -13288.103 -13288.103 323.01278 323.01278 68791.903 68791.903 -41.020398 -41.020398 2000 -13144.238 -13144.238 -13301.487 -13301.487 304.20808 304.20808 68605.221 68605.221 -69.956219 -69.956219 Loop time of 19.2047 on 1 procs for 1000 steps with 4000 atoms Performance: 4.499 ns/day, 5.335 hours/ns, 52.071 timesteps/s 51.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 18.781 | 18.781 | 18.781 | 0.0 | 97.79 Neigh | 0.036228 | 0.036228 | 0.036228 | 0.0 | 0.19 Comm | 0.04083 | 0.04083 | 0.04083 | 0.0 | 0.21 Output | 4.0054e-05 | 4.0054e-05 | 4.0054e-05 | 0.0 | 0.00 Modify | 0.32673 | 0.32673 | 0.32673 | 0.0 | 1.70 Other | | 0.01998 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 412992 ave 412992 max 412992 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 412992 Ave neighs/atom = 103.248 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -13144.238 -13144.238 -13301.487 -13301.487 304.20808 304.20808 68605.221 68605.221 -69.956219 -69.956219 3000 -13130.8 -13130.8 -13296.986 -13296.986 321.49779 321.49779 68633.123 68633.123 450.26682 450.26682 Loop time of 20.2877 on 1 procs for 1000 steps with 4000 atoms Performance: 4.259 ns/day, 5.635 hours/ns, 49.291 timesteps/s 48.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 19.864 | 19.864 | 19.864 | 0.0 | 97.91 Neigh | 0.036378 | 0.036378 | 0.036378 | 0.0 | 0.18 Comm | 0.1015 | 0.1015 | 0.1015 | 0.0 | 0.50 Output | 4.4107e-05 | 4.4107e-05 | 4.4107e-05 | 0.0 | 0.00 Modify | 0.26533 | 0.26533 | 0.26533 | 0.0 | 1.31 Other | | 0.02004 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 412158 ave 412158 max 412158 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 412158 Ave neighs/atom = 103.04 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -13130.8 -13130.8 -13296.986 -13296.986 321.49779 321.49779 68633.123 68633.123 450.26682 450.26682 4000 -13135.27 -13135.27 -13297.239 -13297.239 313.34011 313.34011 68718.103 68718.103 -545.45742 -545.45742 Loop time of 18.8609 on 1 procs for 1000 steps with 4000 atoms Performance: 4.581 ns/day, 5.239 hours/ns, 53.020 timesteps/s 47.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 18.417 | 18.417 | 18.417 | 0.0 | 97.65 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.059518 | 0.059518 | 0.059518 | 0.0 | 0.32 Output | 4.5061e-05 | 4.5061e-05 | 4.5061e-05 | 0.0 | 0.00 Modify | 0.32454 | 0.32454 | 0.32454 | 0.0 | 1.72 Other | | 0.05998 | | | 0.32 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 412832 ave 412832 max 412832 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 412832 Ave neighs/atom = 103.208 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -13135.27 -13135.27 -13297.239 -13297.239 313.34011 313.34011 68718.103 68718.103 -545.45742 -545.45742 5000 -13137.266 -13137.266 -13298.517 -13298.517 311.95164 311.95164 68551.212 68551.212 1164.8093 1164.8093 Loop time of 20.9721 on 1 procs for 1000 steps with 4000 atoms Performance: 4.120 ns/day, 5.826 hours/ns, 47.682 timesteps/s 44.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 20.367 | 20.367 | 20.367 | 0.0 | 97.11 Neigh | 0.036628 | 0.036628 | 0.036628 | 0.0 | 0.17 Comm | 0.11049 | 0.11049 | 0.11049 | 0.0 | 0.53 Output | 3.4809e-05 | 3.4809e-05 | 3.4809e-05 | 0.0 | 0.00 Modify | 0.41813 | 0.41813 | 0.41813 | 0.0 | 1.99 Other | | 0.04004 | | | 0.19 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 411496 ave 411496 max 411496 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 411496 Ave neighs/atom = 102.874 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.582237675981, Press = -100.9303061619 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -13137.266 -13137.266 -13298.517 -13298.517 311.95164 311.95164 68551.212 68551.212 1164.8093 1164.8093 6000 -13134.542 -13134.542 -13296.752 -13296.752 313.80613 313.80613 68679.998 68679.998 -119.61313 -119.61313 Loop time of 21.1367 on 1 procs for 1000 steps with 4000 atoms Performance: 4.088 ns/day, 5.871 hours/ns, 47.311 timesteps/s 46.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 20.476 | 20.476 | 20.476 | 0.0 | 96.88 Neigh | 0.069351 | 0.069351 | 0.069351 | 0.0 | 0.33 Comm | 0.12076 | 0.12076 | 0.12076 | 0.0 | 0.57 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.45082 | 0.45082 | 0.45082 | 0.0 | 2.13 Other | | 0.01951 | | | 0.09 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 411232 ave 411232 max 411232 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 411232 Ave neighs/atom = 102.808 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.791475811871, Press = -32.9337965800633 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -13134.542 -13134.542 -13296.752 -13296.752 313.80613 313.80613 68679.998 68679.998 -119.61313 -119.61313 7000 -13135.884 -13135.884 -13297.524 -13297.524 312.70281 312.70281 68745.686 68745.686 -851.43955 -851.43955 Loop time of 20.2677 on 1 procs for 1000 steps with 4000 atoms Performance: 4.263 ns/day, 5.630 hours/ns, 49.339 timesteps/s 45.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 19.721 | 19.721 | 19.721 | 0.0 | 97.30 Neigh | 0.016539 | 0.016539 | 0.016539 | 0.0 | 0.08 Comm | 0.099944 | 0.099944 | 0.099944 | 0.0 | 0.49 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.4098 | 0.4098 | 0.4098 | 0.0 | 2.02 Other | | 0.02016 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 409704 ave 409704 max 409704 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 409704 Ave neighs/atom = 102.426 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.229078645959, Press = 6.59428784530539 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -13135.884 -13135.884 -13297.524 -13297.524 312.70281 312.70281 68745.686 68745.686 -851.43955 -851.43955 8000 -13138.724 -13138.724 -13300.707 -13300.707 313.36692 313.36692 68514.523 68514.523 1232.9335 1232.9335 Loop time of 20.5484 on 1 procs for 1000 steps with 4000 atoms Performance: 4.205 ns/day, 5.708 hours/ns, 48.666 timesteps/s 47.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 20.045 | 20.045 | 20.045 | 0.0 | 97.55 Neigh | 0.036721 | 0.036721 | 0.036721 | 0.0 | 0.18 Comm | 0.080857 | 0.080857 | 0.080857 | 0.0 | 0.39 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.36617 | 0.36617 | 0.36617 | 0.0 | 1.78 Other | | 0.01989 | | | 0.10 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 412544 ave 412544 max 412544 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 412544 Ave neighs/atom = 103.136 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.084422348683, Press = 0.717222678724012 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -13138.724 -13138.724 -13300.707 -13300.707 313.36692 313.36692 68514.523 68514.523 1232.9335 1232.9335 9000 -13133.878 -13133.878 -13295.442 -13295.442 312.55729 312.55729 68769.12 68769.12 -910.36321 -910.36321 Loop time of 18.2156 on 1 procs for 1000 steps with 4000 atoms Performance: 4.743 ns/day, 5.060 hours/ns, 54.898 timesteps/s 49.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.927 | 17.927 | 17.927 | 0.0 | 98.41 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.039541 | 0.039541 | 0.039541 | 0.0 | 0.22 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.22941 | 0.22941 | 0.22941 | 0.0 | 1.26 Other | | 0.01998 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 414252 ave 414252 max 414252 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 414252 Ave neighs/atom = 103.563 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.357685773, Press = 1.80282629789768 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -13133.878 -13133.878 -13295.442 -13295.442 312.55729 312.55729 68769.12 68769.12 -910.36321 -910.36321 10000 -13135.485 -13135.485 -13297.522 -13297.522 313.47188 313.47188 68626.205 68626.205 310.5537 310.5537 Loop time of 19.7076 on 1 procs for 1000 steps with 4000 atoms Performance: 4.384 ns/day, 5.474 hours/ns, 50.742 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 19.175 | 19.175 | 19.175 | 0.0 | 97.30 Neigh | 0.072989 | 0.072989 | 0.072989 | 0.0 | 0.37 Comm | 0.040936 | 0.040936 | 0.040936 | 0.0 | 0.21 Output | 5.5075e-05 | 5.5075e-05 | 5.5075e-05 | 0.0 | 0.00 Modify | 0.37818 | 0.37818 | 0.37818 | 0.0 | 1.92 Other | | 0.04 | | | 0.20 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 412352 ave 412352 max 412352 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 412352 Ave neighs/atom = 103.088 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.463806703099, Press = -2.33268504548187 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -13135.485 -13135.485 -13297.522 -13297.522 313.47188 313.47188 68626.205 68626.205 310.5537 310.5537 11000 -13132.645 -13132.645 -13293.956 -13293.956 312.06712 312.06712 68699.564 68699.564 40.997441 40.997441 Loop time of 17.2976 on 1 procs for 1000 steps with 4000 atoms Performance: 4.995 ns/day, 4.805 hours/ns, 57.811 timesteps/s 52.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 16.903 | 16.903 | 16.903 | 0.0 | 97.72 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10329 | 0.10329 | 0.10329 | 0.0 | 0.60 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.25091 | 0.25091 | 0.25091 | 0.0 | 1.45 Other | | 0.04032 | | | 0.23 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 412246 ave 412246 max 412246 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 412246 Ave neighs/atom = 103.061 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.637806869208, Press = -2.19231618302145 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -13132.645 -13132.645 -13293.956 -13293.956 312.06712 312.06712 68699.564 68699.564 40.997441 40.997441 12000 -13132.322 -13132.322 -13294.209 -13294.209 313.18152 313.18152 68708.401 68708.401 -121.05458 -121.05458 Loop time of 17.6379 on 1 procs for 1000 steps with 4000 atoms Performance: 4.899 ns/day, 4.899 hours/ns, 56.696 timesteps/s 55.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 17.098 | 17.098 | 17.098 | 0.0 | 96.94 Neigh | 0.07291 | 0.07291 | 0.07291 | 0.0 | 0.41 Comm | 0.080514 | 0.080514 | 0.080514 | 0.0 | 0.46 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.36699 | 0.36699 | 0.36699 | 0.0 | 2.08 Other | | 0.01979 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 411626 ave 411626 max 411626 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 411626 Ave neighs/atom = 102.906 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.760966755068, Press = -2.27476719439082 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -13132.322 -13132.322 -13294.209 -13294.209 313.18152 313.18152 68708.401 68708.401 -121.05458 -121.05458 13000 -13136.539 -13136.539 -13296.805 -13296.805 310.04505 310.04505 68679.634 68679.634 -225.04989 -225.04989 Loop time of 16.0926 on 1 procs for 1000 steps with 4000 atoms Performance: 5.369 ns/day, 4.470 hours/ns, 62.140 timesteps/s 57.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 15.653 | 15.653 | 15.653 | 0.0 | 97.27 Neigh | 0.029001 | 0.029001 | 0.029001 | 0.0 | 0.18 Comm | 0.1205 | 0.1205 | 0.1205 | 0.0 | 0.75 Output | 4.6015e-05 | 4.6015e-05 | 4.6015e-05 | 0.0 | 0.00 Modify | 0.25005 | 0.25005 | 0.25005 | 0.0 | 1.55 Other | | 0.03973 | | | 0.25 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 411992 ave 411992 max 411992 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 411992 Ave neighs/atom = 102.998 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.641596565664, Press = -0.579047511023003 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -13136.539 -13136.539 -13296.805 -13296.805 310.04505 310.04505 68679.634 68679.634 -225.04989 -225.04989 14000 -13131.97 -13131.97 -13295.078 -13295.078 315.54291 315.54291 68615.92 68615.92 828.15573 828.15573 Loop time of 14.8017 on 1 procs for 1000 steps with 4000 atoms Performance: 5.837 ns/day, 4.112 hours/ns, 67.560 timesteps/s 65.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 14.436 | 14.436 | 14.436 | 0.0 | 97.53 Neigh | 0.01262 | 0.01262 | 0.01262 | 0.0 | 0.09 Comm | 0.060684 | 0.060684 | 0.060684 | 0.0 | 0.41 Output | 3.4809e-05 | 3.4809e-05 | 3.4809e-05 | 0.0 | 0.00 Modify | 0.25249 | 0.25249 | 0.25249 | 0.0 | 1.71 Other | | 0.03998 | | | 0.27 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 412000 ave 412000 max 412000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 412000 Ave neighs/atom = 103 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.759983148385, Press = -1.02426179668194 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -13131.97 -13131.97 -13295.078 -13295.078 315.54291 315.54291 68615.92 68615.92 828.15573 828.15573 15000 -13138.287 -13138.287 -13296.764 -13296.764 306.58563 306.58563 68762.671 68762.671 -1040.0923 -1040.0923 Loop time of 16.6203 on 1 procs for 1000 steps with 4000 atoms Performance: 5.198 ns/day, 4.617 hours/ns, 60.167 timesteps/s 57.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 16.035 | 16.035 | 16.035 | 0.0 | 96.48 Neigh | 0.12329 | 0.12329 | 0.12329 | 0.0 | 0.74 Comm | 0.06056 | 0.06056 | 0.06056 | 0.0 | 0.36 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.38186 | 0.38186 | 0.38186 | 0.0 | 2.30 Other | | 0.01974 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 412780 ave 412780 max 412780 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 412780 Ave neighs/atom = 103.195 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.75628929718, Press = -1.26142241305927 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -13138.287 -13138.287 -13296.764 -13296.764 306.58563 306.58563 68762.671 68762.671 -1040.0923 -1040.0923 16000 -13132.221 -13132.221 -13295.051 -13295.051 315.00461 315.00461 68548.14 68548.14 1477.2019 1477.2019 Loop time of 15.864 on 1 procs for 1000 steps with 4000 atoms Performance: 5.446 ns/day, 4.407 hours/ns, 63.036 timesteps/s 57.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 15.553 | 15.553 | 15.553 | 0.0 | 98.04 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.059794 | 0.059794 | 0.059794 | 0.0 | 0.38 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.21093 | 0.21093 | 0.21093 | 0.0 | 1.33 Other | | 0.04018 | | | 0.25 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 410408 ave 410408 max 410408 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 410408 Ave neighs/atom = 102.602 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.71399143752, Press = 1.15759764142852 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -13132.221 -13132.221 -13295.051 -13295.051 315.00461 315.00461 68548.14 68548.14 1477.2019 1477.2019 17000 -13139.259 -13139.259 -13299.137 -13299.137 309.29546 309.29546 68606.699 68606.699 244.4327 244.4327 Loop time of 15.3882 on 1 procs for 1000 steps with 4000 atoms Performance: 5.615 ns/day, 4.274 hours/ns, 64.985 timesteps/s 58.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 15.037 | 15.037 | 15.037 | 0.0 | 97.72 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.059736 | 0.059736 | 0.059736 | 0.0 | 0.39 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.27112 | 0.27112 | 0.27112 | 0.0 | 1.76 Other | | 0.02004 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 413232 ave 413232 max 413232 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 413232 Ave neighs/atom = 103.308 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.650130810508, Press = -1.65807732392396 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -13139.259 -13139.259 -13299.137 -13299.137 309.29546 309.29546 68606.699 68606.699 244.4327 244.4327 18000 -13137.304 -13137.304 -13299.117 -13299.117 313.03846 313.03846 68691.741 68691.741 -646.05854 -646.05854 Loop time of 13.0479 on 1 procs for 1000 steps with 4000 atoms Performance: 6.622 ns/day, 3.624 hours/ns, 76.641 timesteps/s 68.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 12.778 | 12.778 | 12.778 | 0.0 | 97.94 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.059763 | 0.059763 | 0.059763 | 0.0 | 0.46 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.18981 | 0.18981 | 0.18981 | 0.0 | 1.45 Other | | 0.01983 | | | 0.15 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 412332 ave 412332 max 412332 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 412332 Ave neighs/atom = 103.083 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.467822699579, Press = 1.06642029931759 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -13137.304 -13137.304 -13299.117 -13299.117 313.03846 313.03846 68691.741 68691.741 -646.05854 -646.05854 19000 -13137.167 -13137.167 -13298.497 -13298.497 312.1023 312.1023 68585.353 68585.353 723.67752 723.67752 Loop time of 14.8038 on 1 procs for 1000 steps with 4000 atoms Performance: 5.836 ns/day, 4.112 hours/ns, 67.550 timesteps/s 60.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 14.405 | 14.405 | 14.405 | 0.0 | 97.31 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.039588 | 0.039588 | 0.039588 | 0.0 | 0.27 Output | 4.1008e-05 | 4.1008e-05 | 4.1008e-05 | 0.0 | 0.00 Modify | 0.33882 | 0.33882 | 0.33882 | 0.0 | 2.29 Other | | 0.01994 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 411190 ave 411190 max 411190 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 411190 Ave neighs/atom = 102.797 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.442787371923, Press = 2.30215479356095 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -13137.167 -13137.167 -13298.497 -13298.497 312.1023 312.1023 68585.353 68585.353 723.67752 723.67752 20000 -13133.274 -13133.274 -13296.79 -13296.79 316.3332 316.3332 68691.005 68691.005 -226.02127 -226.02127 Loop time of 15.8936 on 1 procs for 1000 steps with 4000 atoms Performance: 5.436 ns/day, 4.415 hours/ns, 62.918 timesteps/s 61.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 15.548 | 15.548 | 15.548 | 0.0 | 97.83 Neigh | 0.036463 | 0.036463 | 0.036463 | 0.0 | 0.23 Comm | 0.040422 | 0.040422 | 0.040422 | 0.0 | 0.25 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.22884 | 0.22884 | 0.22884 | 0.0 | 1.44 Other | | 0.03966 | | | 0.25 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 413166 ave 413166 max 413166 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 413166 Ave neighs/atom = 103.291 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.360235367265, Press = -0.738143376068556 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -13133.274 -13133.274 -13296.79 -13296.79 316.3332 316.3332 68691.005 68691.005 -226.02127 -226.02127 21000 -13141.681 -13141.681 -13300.835 -13300.835 307.89489 307.89489 68625.363 68625.363 -187.85711 -187.85711 Loop time of 13.8671 on 1 procs for 1000 steps with 4000 atoms Performance: 6.231 ns/day, 3.852 hours/ns, 72.113 timesteps/s 70.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 13.59 | 13.59 | 13.59 | 0.0 | 98.00 Neigh | 0.013182 | 0.013182 | 0.013182 | 0.0 | 0.10 Comm | 0.039937 | 0.039937 | 0.039937 | 0.0 | 0.29 Output | 6.8903e-05 | 6.8903e-05 | 6.8903e-05 | 0.0 | 0.00 Modify | 0.1838 | 0.1838 | 0.1838 | 0.0 | 1.33 Other | | 0.03974 | | | 0.29 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 412018 ave 412018 max 412018 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 412018 Ave neighs/atom = 103.004 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 68664.8559640789 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0