# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.987558534741402*${_u_distance} variable latticeconst_converted equal 3.987558534741402*1 lattice fcc ${latticeconst_converted} lattice fcc 3.9875585347414 Lattice spacing in x,y,z = 3.98756 3.98756 3.98756 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (39.8756 39.8756 39.8756) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000443935 secs variable mass_converted equal 26.981538*${_u_mass} variable mass_converted equal 26.981538*1 # specify which KIM Model to use pair_style kim EAM_Dynamo_JacobsenNorskovPuska_1987_Al__MO_411692133366_000 pair_coeff * * Al mass 1 ${mass_converted} mass 1 26.981538 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 63404.6652224655 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 63404.6652224655/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 63404.6652224655/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 63404.6652224655/(1*1*${_u_distance}) variable V0_metal equal 63404.6652224655/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 63404.6652224655*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 63404.6652224655 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 273.15*${_u_temperature} variable temp_converted equal 273.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 273.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "273.15 - 0.2" variable T_up equal "273.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8 ghost atom cutoff = 8 binsize = 4, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 5.48 | 5.48 | 5.48 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -13409.361 -13409.361 -13550.555 -13550.555 273.15 273.15 63404.665 63404.665 2378.5462 2378.5462 1000 -13254.757 -13254.757 -13401.42 -13401.42 283.7283 283.7283 64528.259 64528.259 -1010.8582 -1010.8582 Loop time of 38.9968 on 1 procs for 1000 steps with 4000 atoms Performance: 2.216 ns/day, 10.832 hours/ns, 25.643 timesteps/s 25.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.921 | 37.921 | 37.921 | 0.0 | 97.24 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26302 | 0.26302 | 0.26302 | 0.0 | 0.67 Output | 4.4823e-05 | 4.4823e-05 | 4.4823e-05 | 0.0 | 0.00 Modify | 0.73586 | 0.73586 | 0.73586 | 0.0 | 1.89 Other | | 0.07675 | | | 0.20 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 560000 ave 560000 max 560000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 560000 Ave neighs/atom = 140 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -13254.757 -13254.757 -13401.42 -13401.42 283.7283 283.7283 64528.259 64528.259 -1010.8582 -1010.8582 2000 -13266.291 -13266.291 -13407.737 -13407.737 273.63833 273.63833 64414.448 64414.448 6.5323718 6.5323718 Loop time of 42.217 on 1 procs for 1000 steps with 4000 atoms Performance: 2.047 ns/day, 11.727 hours/ns, 23.687 timesteps/s 25.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.387 | 41.387 | 41.387 | 0.0 | 98.03 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.16523 | 0.16523 | 0.16523 | 0.0 | 0.39 Output | 4.3154e-05 | 4.3154e-05 | 4.3154e-05 | 0.0 | 0.00 Modify | 0.58474 | 0.58474 | 0.58474 | 0.0 | 1.39 Other | | 0.08045 | | | 0.19 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6792 ave 6792 max 6792 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546328 ave 546328 max 546328 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546328 Ave neighs/atom = 136.582 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -13266.291 -13266.291 -13407.737 -13407.737 273.63833 273.63833 64414.448 64414.448 6.5323718 6.5323718 3000 -13262.799 -13262.799 -13404.55 -13404.55 274.2256 274.2256 64431.881 64431.881 21.663469 21.663469 Loop time of 41.6511 on 1 procs for 1000 steps with 4000 atoms Performance: 2.074 ns/day, 11.570 hours/ns, 24.009 timesteps/s 25.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.829 | 40.829 | 40.829 | 0.0 | 98.03 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10402 | 0.10402 | 0.10402 | 0.0 | 0.25 Output | 4.5061e-05 | 4.5061e-05 | 4.5061e-05 | 0.0 | 0.00 Modify | 0.63801 | 0.63801 | 0.63801 | 0.0 | 1.53 Other | | 0.0802 | | | 0.19 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6814 ave 6814 max 6814 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546580 ave 546580 max 546580 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546580 Ave neighs/atom = 136.645 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -13262.799 -13262.799 -13404.55 -13404.55 274.2256 274.2256 64431.881 64431.881 21.663469 21.663469 4000 -13262.343 -13262.343 -13404.358 -13404.358 274.73782 274.73782 64445.054 64445.054 -145.69728 -145.69728 Loop time of 41.6445 on 1 procs for 1000 steps with 4000 atoms Performance: 2.075 ns/day, 11.568 hours/ns, 24.013 timesteps/s 25.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.667 | 40.667 | 40.667 | 0.0 | 97.65 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.22416 | 0.22416 | 0.22416 | 0.0 | 0.54 Output | 0.030086 | 0.030086 | 0.030086 | 0.0 | 0.07 Modify | 0.67267 | 0.67267 | 0.67267 | 0.0 | 1.62 Other | | 0.05037 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6780 ave 6780 max 6780 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546576 ave 546576 max 546576 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546576 Ave neighs/atom = 136.644 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -13262.343 -13262.343 -13404.358 -13404.358 274.73782 274.73782 64445.054 64445.054 -145.69728 -145.69728 5000 -13265.975 -13265.975 -13406.783 -13406.783 272.40269 272.40269 64407.872 64407.872 152.28548 152.28548 Loop time of 42.0235 on 1 procs for 1000 steps with 4000 atoms Performance: 2.056 ns/day, 11.673 hours/ns, 23.796 timesteps/s 25.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.112 | 41.112 | 41.112 | 0.0 | 97.83 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13526 | 0.13526 | 0.13526 | 0.0 | 0.32 Output | 4.6968e-05 | 4.6968e-05 | 4.6968e-05 | 0.0 | 0.00 Modify | 0.7563 | 0.7563 | 0.7563 | 0.0 | 1.80 Other | | 0.02031 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6891 ave 6891 max 6891 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546580 ave 546580 max 546580 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546580 Ave neighs/atom = 136.645 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.035343202735, Press = 146.728903895613 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -13265.975 -13265.975 -13406.783 -13406.783 272.40269 272.40269 64407.872 64407.872 152.28548 152.28548 6000 -13260.534 -13260.534 -13404.501 -13404.501 278.5145 278.5145 64507.612 64507.612 -1020.0263 -1020.0263 Loop time of 41.4456 on 1 procs for 1000 steps with 4000 atoms Performance: 2.085 ns/day, 11.513 hours/ns, 24.128 timesteps/s 24.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.391 | 40.391 | 40.391 | 0.0 | 97.45 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.19916 | 0.19916 | 0.19916 | 0.0 | 0.48 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.71569 | 0.71569 | 0.71569 | 0.0 | 1.73 Other | | 0.1402 | | | 0.34 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6811 ave 6811 max 6811 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546612 ave 546612 max 546612 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546612 Ave neighs/atom = 136.653 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.619783842977, Press = -6.84074718291724 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -13260.534 -13260.534 -13404.501 -13404.501 278.5145 278.5145 64507.612 64507.612 -1020.0263 -1020.0263 7000 -13266.426 -13266.426 -13406.392 -13406.392 270.77418 270.77418 64303.316 64303.316 1647.4559 1647.4559 Loop time of 41.172 on 1 procs for 1000 steps with 4000 atoms Performance: 2.099 ns/day, 11.437 hours/ns, 24.288 timesteps/s 25.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.329 | 40.329 | 40.329 | 0.0 | 97.95 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.27486 | 0.27486 | 0.27486 | 0.0 | 0.67 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.5183 | 0.5183 | 0.5183 | 0.0 | 1.26 Other | | 0.05026 | | | 0.12 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6827 ave 6827 max 6827 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546402 ave 546402 max 546402 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546402 Ave neighs/atom = 136.601 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.018228946433, Press = -0.77771900887815 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -13266.426 -13266.426 -13406.392 -13406.392 270.77418 270.77418 64303.316 64303.316 1647.4559 1647.4559 8000 -13263.398 -13263.398 -13407.373 -13407.373 278.52874 278.52874 64484.392 64484.392 -941.02787 -941.02787 Loop time of 40.4302 on 1 procs for 1000 steps with 4000 atoms Performance: 2.137 ns/day, 11.231 hours/ns, 24.734 timesteps/s 25.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.419 | 39.419 | 39.419 | 0.0 | 97.50 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2948 | 0.2948 | 0.2948 | 0.0 | 0.73 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.64597 | 0.64597 | 0.64597 | 0.0 | 1.60 Other | | 0.07023 | | | 0.17 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6786 ave 6786 max 6786 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546956 ave 546956 max 546956 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546956 Ave neighs/atom = 136.739 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.208910353132, Press = 10.7992413113827 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -13263.398 -13263.398 -13407.373 -13407.373 278.52874 278.52874 64484.392 64484.392 -941.02787 -941.02787 9000 -13264.346 -13264.346 -13406.245 -13406.245 274.51307 274.51307 64449.62 64449.62 -351.00618 -351.00618 Loop time of 41.0491 on 1 procs for 1000 steps with 4000 atoms Performance: 2.105 ns/day, 11.403 hours/ns, 24.361 timesteps/s 25.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.047 | 40.047 | 40.047 | 0.0 | 97.56 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.30474 | 0.30474 | 0.30474 | 0.0 | 0.74 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.67765 | 0.67765 | 0.67765 | 0.0 | 1.65 Other | | 0.02013 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6870 ave 6870 max 6870 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546478 ave 546478 max 546478 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546478 Ave neighs/atom = 136.619 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.379525956642, Press = -2.34100579340472 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -13264.346 -13264.346 -13406.245 -13406.245 274.51307 274.51307 64449.62 64449.62 -351.00618 -351.00618 10000 -13264.384 -13264.384 -13405.199 -13405.199 272.41635 272.41635 64380.213 64380.213 712.03565 712.03565 Loop time of 41.7897 on 1 procs for 1000 steps with 4000 atoms Performance: 2.067 ns/day, 11.608 hours/ns, 23.929 timesteps/s 25.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.869 | 40.869 | 40.869 | 0.0 | 97.80 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.22404 | 0.22404 | 0.22404 | 0.0 | 0.54 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.67683 | 0.67683 | 0.67683 | 0.0 | 1.62 Other | | 0.02022 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6749 ave 6749 max 6749 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546552 ave 546552 max 546552 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546552 Ave neighs/atom = 136.638 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.587292995561, Press = 3.61376391297526 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -13264.384 -13264.384 -13405.199 -13405.199 272.41635 272.41635 64380.213 64380.213 712.03565 712.03565 11000 -13262.099 -13262.099 -13402.271 -13402.271 271.17269 271.17269 64484.771 64484.771 -510.35323 -510.35323 Loop time of 41.2974 on 1 procs for 1000 steps with 4000 atoms Performance: 2.092 ns/day, 11.472 hours/ns, 24.215 timesteps/s 25.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.595 | 40.595 | 40.595 | 0.0 | 98.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.074855 | 0.074855 | 0.074855 | 0.0 | 0.18 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.54716 | 0.54716 | 0.54716 | 0.0 | 1.32 Other | | 0.08024 | | | 0.19 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6863 ave 6863 max 6863 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546786 ave 546786 max 546786 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546786 Ave neighs/atom = 136.696 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.584803437011, Press = 3.45582938646261 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -13262.099 -13262.099 -13402.271 -13402.271 271.17269 271.17269 64484.771 64484.771 -510.35323 -510.35323 12000 -13262.155 -13262.155 -13401.257 -13401.257 269.10255 269.10255 64420.315 64420.315 414.16646 414.16646 Loop time of 41.1989 on 1 procs for 1000 steps with 4000 atoms Performance: 2.097 ns/day, 11.444 hours/ns, 24.272 timesteps/s 25.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.136 | 40.136 | 40.136 | 0.0 | 97.42 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.28939 | 0.28939 | 0.28939 | 0.0 | 0.70 Output | 4.1008e-05 | 4.1008e-05 | 4.1008e-05 | 0.0 | 0.00 Modify | 0.64284 | 0.64284 | 0.64284 | 0.0 | 1.56 Other | | 0.1303 | | | 0.32 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6721 ave 6721 max 6721 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546406 ave 546406 max 546406 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546406 Ave neighs/atom = 136.601 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.638796255151, Press = -1.49134255587849 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -13262.155 -13262.155 -13401.257 -13401.257 269.10255 269.10255 64420.315 64420.315 414.16646 414.16646 13000 -13265.843 -13265.843 -13407.311 -13407.311 273.68054 273.68054 64418.549 64418.549 0.61560869 0.61560869 Loop time of 41.5847 on 1 procs for 1000 steps with 4000 atoms Performance: 2.078 ns/day, 11.551 hours/ns, 24.047 timesteps/s 25.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.496 | 40.496 | 40.496 | 0.0 | 97.38 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.27513 | 0.27513 | 0.27513 | 0.0 | 0.66 Output | 2.6226e-05 | 2.6226e-05 | 2.6226e-05 | 0.0 | 0.00 Modify | 0.7927 | 0.7927 | 0.7927 | 0.0 | 1.91 Other | | 0.02058 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6873 ave 6873 max 6873 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546678 ave 546678 max 546678 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546678 Ave neighs/atom = 136.669 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.497667950718, Press = 3.96696549080399 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -13265.843 -13265.843 -13407.311 -13407.311 273.68054 273.68054 64418.549 64418.549 0.61560869 0.61560869 14000 -13257.285 -13257.285 -13399.527 -13399.527 275.17549 275.17549 64574.241 64574.241 -1535.0141 -1535.0141 Loop time of 40.8814 on 1 procs for 1000 steps with 4000 atoms Performance: 2.113 ns/day, 11.356 hours/ns, 24.461 timesteps/s 25.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.914 | 39.914 | 39.914 | 0.0 | 97.63 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.18407 | 0.18407 | 0.18407 | 0.0 | 0.45 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.71316 | 0.71316 | 0.71316 | 0.0 | 1.74 Other | | 0.07016 | | | 0.17 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6749 ave 6749 max 6749 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546684 ave 546684 max 546684 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546684 Ave neighs/atom = 136.671 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.525241690339, Press = -1.31338833375814 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -13257.285 -13257.285 -13399.527 -13399.527 275.17549 275.17549 64574.241 64574.241 -1535.0141 -1535.0141 15000 -13265.426 -13265.426 -13408.344 -13408.344 276.48392 276.48392 64335.53 64335.53 1102.0081 1102.0081 Loop time of 40.6706 on 1 procs for 1000 steps with 4000 atoms Performance: 2.124 ns/day, 11.297 hours/ns, 24.588 timesteps/s 25.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.71 | 39.71 | 39.71 | 0.0 | 97.64 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.29709 | 0.29709 | 0.29709 | 0.0 | 0.73 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.58341 | 0.58341 | 0.58341 | 0.0 | 1.43 Other | | 0.08017 | | | 0.20 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6844 ave 6844 max 6844 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546220 ave 546220 max 546220 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546220 Ave neighs/atom = 136.555 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.615922328921, Press = -0.714015557911204 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -13265.426 -13265.426 -13408.344 -13408.344 276.48392 276.48392 64335.53 64335.53 1102.0081 1102.0081 16000 -13259.58 -13259.58 -13401.421 -13401.421 274.40144 274.40144 64454.758 64454.758 14.585115 14.585115 Loop time of 39.5911 on 1 procs for 1000 steps with 4000 atoms Performance: 2.182 ns/day, 10.998 hours/ns, 25.258 timesteps/s 26.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.807 | 38.807 | 38.807 | 0.0 | 98.02 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.094204 | 0.094204 | 0.094204 | 0.0 | 0.24 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.66981 | 0.66981 | 0.66981 | 0.0 | 1.69 Other | | 0.02021 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6714 ave 6714 max 6714 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546868 ave 546868 max 546868 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546868 Ave neighs/atom = 136.717 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.651816945415, Press = 3.3669227957135 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -13259.58 -13259.58 -13401.421 -13401.421 274.40144 274.40144 64454.758 64454.758 14.585115 14.585115 17000 -13262.383 -13262.383 -13403.643 -13403.643 273.27589 273.27589 64490.09 64490.09 -664.59399 -664.59399 Loop time of 39.29 on 1 procs for 1000 steps with 4000 atoms Performance: 2.199 ns/day, 10.914 hours/ns, 25.452 timesteps/s 26.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.574 | 38.574 | 38.574 | 0.0 | 98.18 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10532 | 0.10532 | 0.10532 | 0.0 | 0.27 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.50988 | 0.50988 | 0.50988 | 0.0 | 1.30 Other | | 0.1004 | | | 0.26 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6903 ave 6903 max 6903 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546502 ave 546502 max 546502 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546502 Ave neighs/atom = 136.625 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.540561270109, Press = -0.231295966988793 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -13262.383 -13262.383 -13403.643 -13403.643 273.27589 273.27589 64490.09 64490.09 -664.59399 -664.59399 18000 -13263.801 -13263.801 -13405.304 -13405.304 273.74659 273.74659 64364.191 64364.191 932.53272 932.53272 Loop time of 35.3951 on 1 procs for 1000 steps with 4000 atoms Performance: 2.441 ns/day, 9.832 hours/ns, 28.253 timesteps/s 29.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 34.626 | 34.626 | 34.626 | 0.0 | 97.83 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.18455 | 0.18455 | 0.18455 | 0.0 | 0.52 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.54407 | 0.54407 | 0.54407 | 0.0 | 1.54 Other | | 0.04012 | | | 0.11 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6754 ave 6754 max 6754 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546386 ave 546386 max 546386 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546386 Ave neighs/atom = 136.596 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.481182131355, Press = -0.322463917735317 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -13263.801 -13263.801 -13405.304 -13405.304 273.74659 273.74659 64364.191 64364.191 932.53272 932.53272 19000 -13261.915 -13261.915 -13403.19 -13403.19 273.30656 273.30656 64441.182 64441.182 27.736198 27.736198 Loop time of 31.5573 on 1 procs for 1000 steps with 4000 atoms Performance: 2.738 ns/day, 8.766 hours/ns, 31.688 timesteps/s 32.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.876 | 30.876 | 30.876 | 0.0 | 97.84 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13496 | 0.13496 | 0.13496 | 0.0 | 0.43 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.46647 | 0.46647 | 0.46647 | 0.0 | 1.48 Other | | 0.08007 | | | 0.25 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6876 ave 6876 max 6876 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546830 ave 546830 max 546830 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546830 Ave neighs/atom = 136.708 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.465456779269, Press = 2.85158676401648 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -13261.915 -13261.915 -13403.19 -13403.19 273.30656 273.30656 64441.182 64441.182 27.736198 27.736198 20000 -13266.485 -13266.485 -13407.065 -13407.065 271.96257 271.96257 64485.772 64485.772 -912.02359 -912.02359 Loop time of 31.0328 on 1 procs for 1000 steps with 4000 atoms Performance: 2.784 ns/day, 8.620 hours/ns, 32.224 timesteps/s 33.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.329 | 30.329 | 30.329 | 0.0 | 97.73 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.084825 | 0.084825 | 0.084825 | 0.0 | 0.27 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.53792 | 0.53792 | 0.53792 | 0.0 | 1.73 Other | | 0.08051 | | | 0.26 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6854 ave 6854 max 6854 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546552 ave 546552 max 546552 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546552 Ave neighs/atom = 136.638 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.50601647077, Press = -0.612811623041361 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -13266.485 -13266.485 -13407.065 -13407.065 271.96257 271.96257 64485.772 64485.772 -912.02359 -912.02359 21000 -13261.578 -13261.578 -13403.675 -13403.675 274.89689 274.89689 64347.101 64347.101 1344.0264 1344.0264 Loop time of 29.5022 on 1 procs for 1000 steps with 4000 atoms Performance: 2.929 ns/day, 8.195 hours/ns, 33.896 timesteps/s 35.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.851 | 28.851 | 28.851 | 0.0 | 97.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12425 | 0.12425 | 0.12425 | 0.0 | 0.42 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.48654 | 0.48654 | 0.48654 | 0.0 | 1.65 Other | | 0.0402 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6762 ave 6762 max 6762 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546448 ave 546448 max 546448 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546448 Ave neighs/atom = 136.612 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.438091158779, Press = 0.265418185517781 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -13261.578 -13261.578 -13403.675 -13403.675 274.89689 274.89689 64347.101 64347.101 1344.0264 1344.0264 22000 -13271.874 -13271.874 -13409.36 -13409.36 265.9765 265.9765 64452.008 64452.008 -705.63719 -705.63719 Loop time of 26.6432 on 1 procs for 1000 steps with 4000 atoms Performance: 3.243 ns/day, 7.401 hours/ns, 37.533 timesteps/s 38.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.074 | 26.074 | 26.074 | 0.0 | 97.86 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11124 | 0.11124 | 0.11124 | 0.0 | 0.42 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.41772 | 0.41772 | 0.41772 | 0.0 | 1.57 Other | | 0.04 | | | 0.15 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6809 ave 6809 max 6809 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546764 ave 546764 max 546764 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546764 Ave neighs/atom = 136.691 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.344722706807, Press = 3.00762198182202 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -13271.874 -13271.874 -13409.36 -13409.36 265.9765 265.9765 64452.008 64452.008 -705.63719 -705.63719 23000 -13259.649 -13259.649 -13401.419 -13401.419 274.26425 274.26425 64478.968 64478.968 -340.24995 -340.24995 Loop time of 26.2727 on 1 procs for 1000 steps with 4000 atoms Performance: 3.289 ns/day, 7.298 hours/ns, 38.062 timesteps/s 39.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.732 | 25.732 | 25.732 | 0.0 | 97.94 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15408 | 0.15408 | 0.15408 | 0.0 | 0.59 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.36645 | 0.36645 | 0.36645 | 0.0 | 1.39 Other | | 0.01982 | | | 0.08 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6803 ave 6803 max 6803 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546462 ave 546462 max 546462 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546462 Ave neighs/atom = 136.615 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.298824808125, Press = -0.647693884982237 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -13259.649 -13259.649 -13401.419 -13401.419 274.26425 274.26425 64478.968 64478.968 -340.24995 -340.24995 24000 -13264.16 -13264.16 -13404.472 -13404.472 271.44326 271.44326 64397.505 64397.505 514.22891 514.22891 Loop time of 26.0341 on 1 procs for 1000 steps with 4000 atoms Performance: 3.319 ns/day, 7.232 hours/ns, 38.411 timesteps/s 39.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.517 | 25.517 | 25.517 | 0.0 | 98.01 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10487 | 0.10487 | 0.10487 | 0.0 | 0.40 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.36982 | 0.36982 | 0.36982 | 0.0 | 1.42 Other | | 0.04233 | | | 0.16 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6764 ave 6764 max 6764 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546340 ave 546340 max 546340 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546340 Ave neighs/atom = 136.585 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.337414479866, Press = 0.76617336559442 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -13264.16 -13264.16 -13404.472 -13404.472 271.44326 271.44326 64397.505 64397.505 514.22891 514.22891 25000 -13260.048 -13260.048 -13404.041 -13404.041 278.56475 278.56475 64466.852 64466.852 -328.86926 -328.86926 Loop time of 25.8107 on 1 procs for 1000 steps with 4000 atoms Performance: 3.347 ns/day, 7.170 hours/ns, 38.744 timesteps/s 39.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.342 | 25.342 | 25.342 | 0.0 | 98.18 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.065071 | 0.065071 | 0.065071 | 0.0 | 0.25 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.36339 | 0.36339 | 0.36339 | 0.0 | 1.41 Other | | 0.04011 | | | 0.16 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6877 ave 6877 max 6877 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546640 ave 546640 max 546640 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546640 Ave neighs/atom = 136.66 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.40049368688, Press = 0.70539849975717 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -13260.048 -13260.048 -13404.041 -13404.041 278.56475 278.56475 64466.852 64466.852 -328.86926 -328.86926 26000 -13263.713 -13263.713 -13404.952 -13404.952 273.2358 273.2358 64402.317 64402.317 391.54892 391.54892 Loop time of 28.3952 on 1 procs for 1000 steps with 4000 atoms Performance: 3.043 ns/day, 7.888 hours/ns, 35.217 timesteps/s 36.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.729 | 27.729 | 27.729 | 0.0 | 97.65 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1445 | 0.1445 | 0.1445 | 0.0 | 0.51 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.46942 | 0.46942 | 0.46942 | 0.0 | 1.65 Other | | 0.05261 | | | 0.19 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6863 ave 6863 max 6863 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546418 ave 546418 max 546418 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546418 Ave neighs/atom = 136.605 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.340363169462, Press = -1.29392791811602 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 26000 -13263.713 -13263.713 -13404.952 -13404.952 273.2358 273.2358 64402.317 64402.317 391.54892 391.54892 27000 -13263.924 -13263.924 -13404.94 -13404.94 272.80378 272.80378 64350.928 64350.928 1138.6243 1138.6243 Loop time of 28.3526 on 1 procs for 1000 steps with 4000 atoms Performance: 3.047 ns/day, 7.876 hours/ns, 35.270 timesteps/s 36.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.922 | 27.922 | 27.922 | 0.0 | 98.48 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14458 | 0.14458 | 0.14458 | 0.0 | 0.51 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.24556 | 0.24556 | 0.24556 | 0.0 | 0.87 Other | | 0.04034 | | | 0.14 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6751 ave 6751 max 6751 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546646 ave 546646 max 546646 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546646 Ave neighs/atom = 136.661 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.300139377253, Press = 2.99691197812619 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.483 | 5.483 | 5.483 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 27000 -13263.924 -13263.924 -13404.94 -13404.94 272.80378 272.80378 64350.928 64350.928 1138.6243 1138.6243 28000 -13267.17 -13267.17 -13407.933 -13407.933 272.31526 272.31526 64505.623 64505.623 -1291.7336 -1291.7336 Loop time of 27.0391 on 1 procs for 1000 steps with 4000 atoms Performance: 3.195 ns/day, 7.511 hours/ns, 36.983 timesteps/s 38.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.448 | 26.448 | 26.448 | 0.0 | 97.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.064886 | 0.064886 | 0.064886 | 0.0 | 0.24 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.42744 | 0.42744 | 0.42744 | 0.0 | 1.58 Other | | 0.09876 | | | 0.37 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6931 ave 6931 max 6931 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 546882 ave 546882 max 546882 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 546882 Ave neighs/atom = 136.72 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T273.15.out" else "print 'not_converged' file output/vol_T273.15.out" print '${V}' file output/vol_T273.15.out 64432.767838722 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0