# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.050000071525574*${_u_distance} variable latticeconst_converted equal 4.050000071525574*1 lattice fcc ${latticeconst_converted} lattice fcc 4.05000007152557 Lattice spacing in x,y,z = 4.05 4.05 4.05 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (40.5 40.5 40.5) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.000462055 secs variable mass_converted equal 26.981538*${_u_mass} variable mass_converted equal 26.981538*1 # specify which KIM Model to use pair_style kim EAM_Dynamo_AngeloMoodyBaskes_1995_NiAlH__MO_418978237058_005 pair_coeff * * Al mass 1 ${mass_converted} mass 1 26.981538 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 66430.1285195946 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 66430.1285195946/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 66430.1285195946/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 66430.1285195946/(1*1*${_u_distance}) variable V0_metal equal 66430.1285195946/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 66430.1285195946*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 66430.1285195946 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 293.15*${_u_temperature} variable temp_converted equal 293.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 293.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "293.15 - 0.2" variable T_up equal "293.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.65 ghost atom cutoff = 7.65 binsize = 3.825, bins = 11 11 11 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.65 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -13288.467 -13288.467 -13440 -13440 293.15 293.15 66430.129 66430.129 2436.4617 2436.4617 1000 -13094.198 -13094.198 -13252.871 -13252.871 306.96369 306.96369 69013.993 69013.993 -434.61039 -434.61039 Loop time of 34.3116 on 1 procs for 1000 steps with 4000 atoms Performance: 2.518 ns/day, 9.531 hours/ns, 29.145 timesteps/s 25.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.15 | 33.15 | 33.15 | 0.0 | 96.62 Neigh | 0.23539 | 0.23539 | 0.23539 | 0.0 | 0.69 Comm | 0.20114 | 0.20114 | 0.20114 | 0.0 | 0.59 Output | 4.6015e-05 | 4.6015e-05 | 4.6015e-05 | 0.0 | 0.00 Modify | 0.61432 | 0.61432 | 0.61432 | 0.0 | 1.79 Other | | 0.1102 | | | 0.32 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 428682 ave 428682 max 428682 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 428682 Ave neighs/atom = 107.171 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -13094.198 -13094.198 -13252.871 -13252.871 306.96369 306.96369 69013.993 69013.993 -434.61039 -434.61039 2000 -13104.953 -13104.953 -13256.265 -13256.265 292.72393 292.72393 68983.652 68983.652 -328.02878 -328.02878 Loop time of 39.4828 on 1 procs for 1000 steps with 4000 atoms Performance: 2.188 ns/day, 10.967 hours/ns, 25.328 timesteps/s 24.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.098 | 38.098 | 38.098 | 0.0 | 96.49 Neigh | 0.43913 | 0.43913 | 0.43913 | 0.0 | 1.11 Comm | 0.31121 | 0.31121 | 0.31121 | 0.0 | 0.79 Output | 4.3869e-05 | 4.3869e-05 | 4.3869e-05 | 0.0 | 0.00 Modify | 0.52484 | 0.52484 | 0.52484 | 0.0 | 1.33 Other | | 0.1098 | | | 0.28 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 429396 ave 429396 max 429396 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 429396 Ave neighs/atom = 107.349 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -13104.953 -13104.953 -13256.265 -13256.265 292.72393 292.72393 68983.652 68983.652 -328.02878 -328.02878 3000 -13105.42 -13105.42 -13256.637 -13256.637 292.53948 292.53948 68890.912 68890.912 547.09441 547.09441 Loop time of 38.5022 on 1 procs for 1000 steps with 4000 atoms Performance: 2.244 ns/day, 10.695 hours/ns, 25.973 timesteps/s 25.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.164 | 37.164 | 37.164 | 0.0 | 96.53 Neigh | 0.57682 | 0.57682 | 0.57682 | 0.0 | 1.50 Comm | 0.069854 | 0.069854 | 0.069854 | 0.0 | 0.18 Output | 5.9128e-05 | 5.9128e-05 | 5.9128e-05 | 0.0 | 0.00 Modify | 0.61197 | 0.61197 | 0.61197 | 0.0 | 1.59 Other | | 0.07923 | | | 0.21 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 430852 ave 430852 max 430852 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 430852 Ave neighs/atom = 107.713 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -13105.42 -13105.42 -13256.637 -13256.637 292.53948 292.53948 68890.912 68890.912 547.09441 547.09441 4000 -13101.75 -13101.75 -13253.242 -13253.242 293.07171 293.07171 69057.5 69057.5 -625.31554 -625.31554 Loop time of 38.2344 on 1 procs for 1000 steps with 4000 atoms Performance: 2.260 ns/day, 10.621 hours/ns, 26.154 timesteps/s 25.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 36.638 | 36.638 | 36.638 | 0.0 | 95.82 Neigh | 0.58548 | 0.58548 | 0.58548 | 0.0 | 1.53 Comm | 0.28046 | 0.28046 | 0.28046 | 0.0 | 0.73 Output | 4.4107e-05 | 4.4107e-05 | 4.4107e-05 | 0.0 | 0.00 Modify | 0.6213 | 0.6213 | 0.6213 | 0.0 | 1.62 Other | | 0.1093 | | | 0.29 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5843 ave 5843 max 5843 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 428510 ave 428510 max 428510 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 428510 Ave neighs/atom = 107.127 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -13101.75 -13101.75 -13253.242 -13253.242 293.07171 293.07171 69057.5 69057.5 -625.31554 -625.31554 5000 -13107.132 -13107.132 -13257.55 -13257.55 290.99461 290.99461 68874.862 68874.862 561.22778 561.22778 Loop time of 38.9195 on 1 procs for 1000 steps with 4000 atoms Performance: 2.220 ns/day, 10.811 hours/ns, 25.694 timesteps/s 24.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.519 | 37.519 | 37.519 | 0.0 | 96.40 Neigh | 0.51221 | 0.51221 | 0.51221 | 0.0 | 1.32 Comm | 0.1303 | 0.1303 | 0.1303 | 0.0 | 0.33 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.61791 | 0.61791 | 0.61791 | 0.0 | 1.59 Other | | 0.1396 | | | 0.36 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 429178 ave 429178 max 429178 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 429178 Ave neighs/atom = 107.294 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.406677461713, Press = -113.130314255835 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -13107.132 -13107.132 -13257.55 -13257.55 290.99461 290.99461 68874.862 68874.862 561.22778 561.22778 6000 -13108.339 -13108.339 -13262.72 -13262.72 298.65953 298.65953 68754.864 68754.864 465.57416 465.57416 Loop time of 38.65 on 1 procs for 1000 steps with 4000 atoms Performance: 2.235 ns/day, 10.736 hours/ns, 25.873 timesteps/s 25.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.322 | 37.322 | 37.322 | 0.0 | 96.56 Neigh | 0.56305 | 0.56305 | 0.56305 | 0.0 | 1.46 Comm | 0.15005 | 0.15005 | 0.15005 | 0.0 | 0.39 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.49589 | 0.49589 | 0.49589 | 0.0 | 1.28 Other | | 0.119 | | | 0.31 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 432020 ave 432020 max 432020 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 432020 Ave neighs/atom = 108.005 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.954827360937, Press = -9.35791978888137 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -13108.339 -13108.339 -13262.72 -13262.72 298.65953 298.65953 68754.864 68754.864 465.57416 465.57416 7000 -13107.869 -13107.869 -13260.856 -13260.856 295.96421 295.96421 68900.742 68900.742 -457.86883 -457.86883 Loop time of 38.3197 on 1 procs for 1000 steps with 4000 atoms Performance: 2.255 ns/day, 10.644 hours/ns, 26.096 timesteps/s 25.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 36.668 | 36.668 | 36.668 | 0.0 | 95.69 Neigh | 0.40676 | 0.40676 | 0.40676 | 0.0 | 1.06 Comm | 0.19012 | 0.19012 | 0.19012 | 0.0 | 0.50 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.98561 | 0.98561 | 0.98561 | 0.0 | 2.57 Other | | 0.06941 | | | 0.18 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 432956 ave 432956 max 432956 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 432956 Ave neighs/atom = 108.239 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.868701218069, Press = 12.0718737739706 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -13107.869 -13107.869 -13260.856 -13260.856 295.96421 295.96421 68900.742 68900.742 -457.86883 -457.86883 8000 -13101.544 -13101.544 -13255.726 -13255.726 298.27577 298.27577 68948.387 68948.387 137.06238 137.06238 Loop time of 37.3307 on 1 procs for 1000 steps with 4000 atoms Performance: 2.314 ns/day, 10.370 hours/ns, 26.788 timesteps/s 25.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 36.153 | 36.153 | 36.153 | 0.0 | 96.84 Neigh | 0.50279 | 0.50279 | 0.50279 | 0.0 | 1.35 Comm | 0.03999 | 0.03999 | 0.03999 | 0.0 | 0.11 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.55595 | 0.55595 | 0.55595 | 0.0 | 1.49 Other | | 0.07917 | | | 0.21 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 429816 ave 429816 max 429816 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 429816 Ave neighs/atom = 107.454 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.026864313586, Press = -7.10420423623577 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -13101.544 -13101.544 -13255.726 -13255.726 298.27577 298.27577 68948.387 68948.387 137.06238 137.06238 9000 -13099.603 -13099.603 -13251.469 -13251.469 293.79461 293.79461 69031.186 69031.186 105.94268 105.94268 Loop time of 36.6044 on 1 procs for 1000 steps with 4000 atoms Performance: 2.360 ns/day, 10.168 hours/ns, 27.319 timesteps/s 26.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.32 | 35.32 | 35.32 | 0.0 | 96.49 Neigh | 0.51329 | 0.51329 | 0.51329 | 0.0 | 1.40 Comm | 0.17029 | 0.17029 | 0.17029 | 0.0 | 0.47 Output | 3.4809e-05 | 3.4809e-05 | 3.4809e-05 | 0.0 | 0.00 Modify | 0.58164 | 0.58164 | 0.58164 | 0.0 | 1.59 Other | | 0.01949 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 429270 ave 429270 max 429270 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 429270 Ave neighs/atom = 107.317 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.187033603916, Press = -5.70113791379318 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -13099.603 -13099.603 -13251.469 -13251.469 293.79461 293.79461 69031.186 69031.186 105.94268 105.94268 10000 -13106.678 -13106.678 -13258.887 -13258.887 294.45817 294.45817 68830.336 68830.336 327.55805 327.55805 Loop time of 37.4468 on 1 procs for 1000 steps with 4000 atoms Performance: 2.307 ns/day, 10.402 hours/ns, 26.705 timesteps/s 26.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 36.437 | 36.437 | 36.437 | 0.0 | 97.30 Neigh | 0.40278 | 0.40278 | 0.40278 | 0.0 | 1.08 Comm | 0.22148 | 0.22148 | 0.22148 | 0.0 | 0.59 Output | 5.2929e-05 | 5.2929e-05 | 5.2929e-05 | 0.0 | 0.00 Modify | 0.36615 | 0.36615 | 0.36615 | 0.0 | 0.98 Other | | 0.01953 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 431332 ave 431332 max 431332 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 431332 Ave neighs/atom = 107.833 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.302360572789, Press = 1.03101676815094 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -13106.678 -13106.678 -13258.887 -13258.887 294.45817 294.45817 68830.336 68830.336 327.55805 327.55805 11000 -13115.809 -13115.809 -13264.759 -13264.759 288.15396 288.15396 68783.69 68783.69 26.507924 26.507924 Loop time of 38.513 on 1 procs for 1000 steps with 4000 atoms Performance: 2.243 ns/day, 10.698 hours/ns, 25.965 timesteps/s 25.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.215 | 37.215 | 37.215 | 0.0 | 96.63 Neigh | 0.57116 | 0.57116 | 0.57116 | 0.0 | 1.48 Comm | 0.15086 | 0.15086 | 0.15086 | 0.0 | 0.39 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.5267 | 0.5267 | 0.5267 | 0.0 | 1.37 Other | | 0.04941 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 435222 ave 435222 max 435222 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 435222 Ave neighs/atom = 108.805 Neighbor list builds = 9 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.020866974847, Press = 9.24292582391832 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -13115.809 -13115.809 -13264.759 -13264.759 288.15396 288.15396 68783.69 68783.69 26.507924 26.507924 12000 -13105.681 -13105.681 -13255.119 -13255.119 289.09787 289.09787 68947.458 68947.458 -47.957339 -47.957339 Loop time of 37.2304 on 1 procs for 1000 steps with 4000 atoms Performance: 2.321 ns/day, 10.342 hours/ns, 26.860 timesteps/s 26.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.769 | 35.769 | 35.769 | 0.0 | 96.08 Neigh | 0.46278 | 0.46278 | 0.46278 | 0.0 | 1.24 Comm | 0.21059 | 0.21059 | 0.21059 | 0.0 | 0.57 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.70848 | 0.70848 | 0.70848 | 0.0 | 1.90 Other | | 0.07916 | | | 0.21 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 429570 ave 429570 max 429570 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 429570 Ave neighs/atom = 107.392 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.773801817185, Press = -3.77893761498713 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -13105.681 -13105.681 -13255.119 -13255.119 289.09787 289.09787 68947.458 68947.458 -47.957339 -47.957339 13000 -13107.203 -13107.203 -13258.774 -13258.774 293.22441 293.22441 68931.211 68931.211 -446.32165 -446.32165 Loop time of 37.9617 on 1 procs for 1000 steps with 4000 atoms Performance: 2.276 ns/day, 10.545 hours/ns, 26.342 timesteps/s 25.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 36.306 | 36.306 | 36.306 | 0.0 | 95.64 Neigh | 0.53905 | 0.53905 | 0.53905 | 0.0 | 1.42 Comm | 0.31011 | 0.31011 | 0.31011 | 0.0 | 0.82 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.75729 | 0.75729 | 0.75729 | 0.0 | 1.99 Other | | 0.04926 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 430398 ave 430398 max 430398 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 430398 Ave neighs/atom = 107.6 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.862674495989, Press = 0.217567011988114 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -13107.203 -13107.203 -13258.774 -13258.774 293.22441 293.22441 68931.211 68931.211 -446.32165 -446.32165 14000 -13110.077 -13110.077 -13259.305 -13259.305 288.69008 288.69008 68864.496 68864.496 242.17188 242.17188 Loop time of 38.0701 on 1 procs for 1000 steps with 4000 atoms Performance: 2.269 ns/day, 10.575 hours/ns, 26.267 timesteps/s 25.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 36.337 | 36.337 | 36.337 | 0.0 | 95.45 Neigh | 0.44695 | 0.44695 | 0.44695 | 0.0 | 1.17 Comm | 0.27467 | 0.27467 | 0.27467 | 0.0 | 0.72 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.93256 | 0.93256 | 0.93256 | 0.0 | 2.45 Other | | 0.07924 | | | 0.21 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 430314 ave 430314 max 430314 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 430314 Ave neighs/atom = 107.579 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.78857229305, Press = -3.1630878391783 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -13110.077 -13110.077 -13259.305 -13259.305 288.69008 288.69008 68864.496 68864.496 242.17188 242.17188 15000 -13102.347 -13102.347 -13254.208 -13254.208 293.78658 293.78658 69009.142 69009.142 -587.42483 -587.42483 Loop time of 38.1031 on 1 procs for 1000 steps with 4000 atoms Performance: 2.268 ns/day, 10.584 hours/ns, 26.245 timesteps/s 25.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.037 | 37.037 | 37.037 | 0.0 | 97.20 Neigh | 0.42993 | 0.42993 | 0.42993 | 0.0 | 1.13 Comm | 0.1004 | 0.1004 | 0.1004 | 0.0 | 0.26 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.51706 | 0.51706 | 0.51706 | 0.0 | 1.36 Other | | 0.01919 | | | 0.05 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 430318 ave 430318 max 430318 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 430318 Ave neighs/atom = 107.579 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.928107939826, Press = 0.691534868849066 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -13102.347 -13102.347 -13254.208 -13254.208 293.78658 293.78658 69009.142 69009.142 -587.42483 -587.42483 16000 -13108.091 -13108.091 -13258.306 -13258.306 290.60102 290.60102 68879.356 68879.356 300.42709 300.42709 Loop time of 38.1133 on 1 procs for 1000 steps with 4000 atoms Performance: 2.267 ns/day, 10.587 hours/ns, 26.238 timesteps/s 25.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 36.704 | 36.704 | 36.704 | 0.0 | 96.30 Neigh | 0.42139 | 0.42139 | 0.42139 | 0.0 | 1.11 Comm | 0.16035 | 0.16035 | 0.16035 | 0.0 | 0.42 Output | 5.0068e-05 | 5.0068e-05 | 5.0068e-05 | 0.0 | 0.00 Modify | 0.71801 | 0.71801 | 0.71801 | 0.0 | 1.88 Other | | 0.1096 | | | 0.29 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 429572 ave 429572 max 429572 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 429572 Ave neighs/atom = 107.393 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.918964009317, Press = -2.27355696378385 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -13108.091 -13108.091 -13258.306 -13258.306 290.60102 290.60102 68879.356 68879.356 300.42709 300.42709 17000 -13103.997 -13103.997 -13258.161 -13258.161 298.24154 298.24154 68905.101 68905.101 98.262382 98.262382 Loop time of 37.9178 on 1 procs for 1000 steps with 4000 atoms Performance: 2.279 ns/day, 10.533 hours/ns, 26.373 timesteps/s 25.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 36.572 | 36.572 | 36.572 | 0.0 | 96.45 Neigh | 0.49121 | 0.49121 | 0.49121 | 0.0 | 1.30 Comm | 0.20883 | 0.20883 | 0.20883 | 0.0 | 0.55 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.59664 | 0.59664 | 0.59664 | 0.0 | 1.57 Other | | 0.04941 | | | 0.13 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 431296 ave 431296 max 431296 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 431296 Ave neighs/atom = 107.824 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.041737915266, Press = 0.793228638907091 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -13103.997 -13103.997 -13258.161 -13258.161 298.24154 298.24154 68905.101 68905.101 98.262382 98.262382 18000 -13108.781 -13108.781 -13255.129 -13255.129 283.11996 283.11996 68869.456 68869.456 756.68151 756.68151 Loop time of 37.0314 on 1 procs for 1000 steps with 4000 atoms Performance: 2.333 ns/day, 10.287 hours/ns, 27.004 timesteps/s 26.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.638 | 35.638 | 35.638 | 0.0 | 96.24 Neigh | 0.52742 | 0.52742 | 0.52742 | 0.0 | 1.42 Comm | 0.10017 | 0.10017 | 0.10017 | 0.0 | 0.27 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.68631 | 0.68631 | 0.68631 | 0.0 | 1.85 Other | | 0.0792 | | | 0.21 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 431694 ave 431694 max 431694 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 431694 Ave neighs/atom = 107.924 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.188550393437, Press = 1.31617581988138 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -13108.781 -13108.781 -13255.129 -13255.129 283.11996 283.11996 68869.456 68869.456 756.68151 756.68151 19000 -13104.269 -13104.269 -13256.749 -13256.749 294.98423 294.98423 68918.178 68918.178 215.37888 215.37888 Loop time of 35.6894 on 1 procs for 1000 steps with 4000 atoms Performance: 2.421 ns/day, 9.914 hours/ns, 28.020 timesteps/s 27.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 34.536 | 34.536 | 34.536 | 0.0 | 96.77 Neigh | 0.38622 | 0.38622 | 0.38622 | 0.0 | 1.08 Comm | 0.07033 | 0.07033 | 0.07033 | 0.0 | 0.20 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.61709 | 0.61709 | 0.61709 | 0.0 | 1.73 Other | | 0.07925 | | | 0.22 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5845 ave 5845 max 5845 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 428842 ave 428842 max 428842 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 428842 Ave neighs/atom = 107.21 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.093484563793, Press = -2.84808339075831 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -13104.269 -13104.269 -13256.749 -13256.749 294.98423 294.98423 68918.178 68918.178 215.37888 215.37888 20000 -13102.327 -13102.327 -13253.229 -13253.229 291.92948 291.92948 68941.361 68941.361 434.54501 434.54501 Loop time of 31.6165 on 1 procs for 1000 steps with 4000 atoms Performance: 2.733 ns/day, 8.782 hours/ns, 31.629 timesteps/s 30.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.563 | 30.563 | 30.563 | 0.0 | 96.67 Neigh | 0.36175 | 0.36175 | 0.36175 | 0.0 | 1.14 Comm | 0.089819 | 0.089819 | 0.089819 | 0.0 | 0.28 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.53266 | 0.53266 | 0.53266 | 0.0 | 1.68 Other | | 0.06922 | | | 0.22 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 431024 ave 431024 max 431024 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 431024 Ave neighs/atom = 107.756 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.101355576851, Press = 1.53024328283975 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -13102.327 -13102.327 -13253.229 -13253.229 291.92948 291.92948 68941.361 68941.361 434.54501 434.54501 21000 -13109.428 -13109.428 -13259.458 -13259.458 290.24335 290.24335 68853.217 68853.217 174.65879 174.65879 Loop time of 29.03 on 1 procs for 1000 steps with 4000 atoms Performance: 2.976 ns/day, 8.064 hours/ns, 34.447 timesteps/s 33.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.246 | 28.246 | 28.246 | 0.0 | 97.30 Neigh | 0.35753 | 0.35753 | 0.35753 | 0.0 | 1.23 Comm | 0.059936 | 0.059936 | 0.059936 | 0.0 | 0.21 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.34751 | 0.34751 | 0.34751 | 0.0 | 1.20 Other | | 0.01921 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5843 ave 5843 max 5843 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 431184 ave 431184 max 431184 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 431184 Ave neighs/atom = 107.796 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.067670291252, Press = -1.32749542656287 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -13109.428 -13109.428 -13259.458 -13259.458 290.24335 290.24335 68853.217 68853.217 174.65879 174.65879 22000 -13103.688 -13103.688 -13257.04 -13257.04 296.66832 296.66832 68928.685 68928.685 92.30848 92.30848 Loop time of 27.7037 on 1 procs for 1000 steps with 4000 atoms Performance: 3.119 ns/day, 7.695 hours/ns, 36.096 timesteps/s 34.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.72 | 26.72 | 26.72 | 0.0 | 96.45 Neigh | 0.34772 | 0.34772 | 0.34772 | 0.0 | 1.26 Comm | 0.12018 | 0.12018 | 0.12018 | 0.0 | 0.43 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.49627 | 0.49627 | 0.49627 | 0.0 | 1.79 Other | | 0.01916 | | | 0.07 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 432068 ave 432068 max 432068 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 432068 Ave neighs/atom = 108.017 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.980636635809, Press = 2.06469778553003 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -13103.688 -13103.688 -13257.04 -13257.04 296.66832 296.66832 68928.685 68928.685 92.30848 92.30848 23000 -13103.196 -13103.196 -13251.971 -13251.971 287.81604 287.81604 68998.542 68998.542 301.1547 301.1547 Loop time of 26.976 on 1 procs for 1000 steps with 4000 atoms Performance: 3.203 ns/day, 7.493 hours/ns, 37.070 timesteps/s 35.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.963 | 25.963 | 25.963 | 0.0 | 96.24 Neigh | 0.29895 | 0.29895 | 0.29895 | 0.0 | 1.11 Comm | 0.060055 | 0.060055 | 0.060055 | 0.0 | 0.22 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.57477 | 0.57477 | 0.57477 | 0.0 | 2.13 Other | | 0.07948 | | | 0.29 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 430542 ave 430542 max 430542 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 430542 Ave neighs/atom = 107.635 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.945385987244, Press = 0.770118060778018 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -13103.196 -13103.196 -13251.971 -13251.971 287.81604 287.81604 68998.542 68998.542 301.1547 301.1547 24000 -13106.098 -13106.098 -13258.4 -13258.4 294.63906 294.63906 68924.499 68924.499 -276.75308 -276.75308 Loop time of 25.6578 on 1 procs for 1000 steps with 4000 atoms Performance: 3.367 ns/day, 7.127 hours/ns, 38.974 timesteps/s 37.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 24.73 | 24.73 | 24.73 | 0.0 | 96.38 Neigh | 0.27188 | 0.27188 | 0.27188 | 0.0 | 1.06 Comm | 0.10023 | 0.10023 | 0.10023 | 0.0 | 0.39 Output | 3.1948e-05 | 3.1948e-05 | 3.1948e-05 | 0.0 | 0.00 Modify | 0.48618 | 0.48618 | 0.48618 | 0.0 | 1.89 Other | | 0.06928 | | | 0.27 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 428936 ave 428936 max 428936 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 428936 Ave neighs/atom = 107.234 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.979556226987, Press = -2.61228565243645 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -13106.098 -13106.098 -13258.4 -13258.4 294.63906 294.63906 68924.499 68924.499 -276.75308 -276.75308 25000 -13110.423 -13110.423 -13259.286 -13259.286 287.98534 287.98534 68853.9 68853.9 183.51768 183.51768 Loop time of 24.6067 on 1 procs for 1000 steps with 4000 atoms Performance: 3.511 ns/day, 6.835 hours/ns, 40.639 timesteps/s 39.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 23.653 | 23.653 | 23.653 | 0.0 | 96.13 Neigh | 0.37384 | 0.37384 | 0.37384 | 0.0 | 1.52 Comm | 0.15282 | 0.15282 | 0.15282 | 0.0 | 0.62 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.36716 | 0.36716 | 0.36716 | 0.0 | 1.49 Other | | 0.05934 | | | 0.24 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 431122 ave 431122 max 431122 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 431122 Ave neighs/atom = 107.781 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.04179325535, Press = 0.44512136081386 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -13110.423 -13110.423 -13259.286 -13259.286 287.98534 287.98534 68853.9 68853.9 183.51768 183.51768 26000 -13106.337 -13106.337 -13257.366 -13257.366 292.17577 292.17577 68972.019 68972.019 -645.57298 -645.57298 Loop time of 23.3466 on 1 procs for 1000 steps with 4000 atoms Performance: 3.701 ns/day, 6.485 hours/ns, 42.833 timesteps/s 41.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 22.689 | 22.689 | 22.689 | 0.0 | 97.18 Neigh | 0.1714 | 0.1714 | 0.1714 | 0.0 | 0.73 Comm | 0.05983 | 0.05983 | 0.05983 | 0.0 | 0.26 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.3863 | 0.3863 | 0.3863 | 0.0 | 1.65 Other | | 0.03966 | | | 0.17 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 432510 ave 432510 max 432510 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 432510 Ave neighs/atom = 108.127 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.042974305111, Press = -1.3558876018228 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 5.369 | 5.369 | 5.369 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 26000 -13106.337 -13106.337 -13257.366 -13257.366 292.17577 292.17577 68972.019 68972.019 -645.57298 -645.57298 27000 -13102.236 -13102.236 -13255.727 -13255.727 296.93816 296.93816 68927.615 68927.615 -45.297411 -45.297411 Loop time of 23.5273 on 1 procs for 1000 steps with 4000 atoms Performance: 3.672 ns/day, 6.535 hours/ns, 42.504 timesteps/s 40.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 22.827 | 22.827 | 22.827 | 0.0 | 97.02 Neigh | 0.25706 | 0.25706 | 0.25706 | 0.0 | 1.09 Comm | 0.039518 | 0.039518 | 0.039518 | 0.0 | 0.17 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.36492 | 0.36492 | 0.36492 | 0.0 | 1.55 Other | | 0.03917 | | | 0.17 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5841 ave 5841 max 5841 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 430862 ave 430862 max 430862 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 430862 Ave neighs/atom = 107.716 Neighbor list builds = 8 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T293.15.out" else "print 'not_converged' file output/vol_T293.15.out" print '${V}' file output/vol_T293.15.out 68899.103217251 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0