# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.044527357816695*${_u_distance} variable latticeconst_converted equal 4.044527357816695*1 lattice fcc ${latticeconst_converted} lattice fcc 4.04452735781669 Lattice spacing in x,y,z = 4.0445274 4.0445274 4.0445274 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (40.445274 40.445274 40.445274) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms using lattice units in orthogonal box = (0.0000000 0.0000000 0.0000000) to (40.445274 40.445274 40.445274) create_atoms CPU = 0.005 seconds variable mass_converted equal 26.981538*${_u_mass} variable mass_converted equal 26.981538*1 kim_interactions Al WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Al #=== BEGIN kim interactions ================================== pair_style kim EAM_Dynamo_SongMendelev_2021_AlSm__MO_722733117926_000 pair_coeff * * Al #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 26.981538 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 66161.1936860816 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 66161.1936860816/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 66161.1936860816/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 66161.1936860816/(1*1*${_u_distance}) variable V0_metal equal 66161.1936860816/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 66161.1936860816*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 66161.1936860816 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_722733117926_000#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.386 | 7.386 | 7.386 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -13085.483 -13085.483 -13247.353 -13247.353 313.15 313.15 66161.194 66161.194 2613.2684 2613.2684 1000 -12910.069 -12910.069 -13076.679 -13076.679 322.31794 322.31794 68177.121 68177.121 1016.3033 1016.3033 Loop time of 125.001 on 1 procs for 1000 steps with 4000 atoms Performance: 0.691 ns/day, 34.723 hours/ns, 8.000 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 123.86 | 123.86 | 123.86 | 0.0 | 99.08 Neigh | 0.11878 | 0.11878 | 0.11878 | 0.0 | 0.10 Comm | 0.20854 | 0.20854 | 0.20854 | 0.0 | 0.17 Output | 0.00022597 | 0.00022597 | 0.00022597 | 0.0 | 0.00 Modify | 0.71159 | 0.71159 | 0.71159 | 0.0 | 0.57 Other | | 0.1059 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8273.00 ave 8273 max 8273 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 942260.0 ave 942260 max 942260 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 942260 Ave neighs/atom = 235.56500 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -12910.069 -12910.069 -13076.679 -13076.679 322.31794 322.31794 68177.121 68177.121 1016.3033 1016.3033 2000 -12926.388 -12926.388 -13084.102 -13084.102 305.10727 305.10727 68165.838 68165.838 239.28692 239.28692 Loop time of 128.5 on 1 procs for 1000 steps with 4000 atoms Performance: 0.672 ns/day, 35.694 hours/ns, 7.782 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.49 | 127.49 | 127.49 | 0.0 | 99.21 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20409 | 0.20409 | 0.20409 | 0.0 | 0.16 Output | 0.0002133 | 0.0002133 | 0.0002133 | 0.0 | 0.00 Modify | 0.70285 | 0.70285 | 0.70285 | 0.0 | 0.55 Other | | 0.1048 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8254.00 ave 8254 max 8254 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 942298.0 ave 942298 max 942298 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 942298 Ave neighs/atom = 235.57450 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -12926.388 -12926.388 -13084.102 -13084.102 305.10727 305.10727 68165.838 68165.838 239.28692 239.28692 3000 -12919.893 -12919.893 -13081.215 -13081.215 312.08708 312.08708 68202.325 68202.325 -21.819802 -21.819802 Loop time of 128.212 on 1 procs for 1000 steps with 4000 atoms Performance: 0.674 ns/day, 35.615 hours/ns, 7.800 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.2 | 127.2 | 127.2 | 0.0 | 99.21 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20278 | 0.20278 | 0.20278 | 0.0 | 0.16 Output | 0.00026579 | 0.00026579 | 0.00026579 | 0.0 | 0.00 Modify | 0.70383 | 0.70383 | 0.70383 | 0.0 | 0.55 Other | | 0.1053 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8241.00 ave 8241 max 8241 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 942156.0 ave 942156 max 942156 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 942156 Ave neighs/atom = 235.53900 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -12919.893 -12919.893 -13081.215 -13081.215 312.08708 312.08708 68202.325 68202.325 -21.819802 -21.819802 4000 -12919.676 -12919.676 -13080.947 -13080.947 311.989 311.989 68192.218 68192.218 122.6087 122.6087 Loop time of 130.694 on 1 procs for 1000 steps with 4000 atoms Performance: 0.661 ns/day, 36.304 hours/ns, 7.651 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 129.67 | 129.67 | 129.67 | 0.0 | 99.21 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20565 | 0.20565 | 0.20565 | 0.0 | 0.16 Output | 0.0002675 | 0.0002675 | 0.0002675 | 0.0 | 0.00 Modify | 0.71458 | 0.71458 | 0.71458 | 0.0 | 0.55 Other | | 0.1062 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8242.00 ave 8242 max 8242 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 942126.0 ave 942126 max 942126 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 942126 Ave neighs/atom = 235.53150 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -12919.676 -12919.676 -13080.947 -13080.947 311.989 311.989 68192.218 68192.218 122.6087 122.6087 5000 -12923.42 -12923.42 -13084.542 -13084.542 311.69975 311.69975 68157.686 68157.686 261.27063 261.27063 Loop time of 126.644 on 1 procs for 1000 steps with 4000 atoms Performance: 0.682 ns/day, 35.179 hours/ns, 7.896 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 125.64 | 125.64 | 125.64 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20089 | 0.20089 | 0.20089 | 0.0 | 0.16 Output | 0.00017885 | 0.00017885 | 0.00017885 | 0.0 | 0.00 Modify | 0.70134 | 0.70134 | 0.70134 | 0.0 | 0.55 Other | | 0.1054 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8233.00 ave 8233 max 8233 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 942028.0 ave 942028 max 942028 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 942028 Ave neighs/atom = 235.50700 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.198068709999, Press = -401.554893524259 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -12923.42 -12923.42 -13084.542 -13084.542 311.69975 311.69975 68157.686 68157.686 261.27063 261.27063 6000 -12918.366 -12918.366 -13082.242 -13082.242 317.02928 317.02928 68197.234 68197.234 4.4113999 4.4113999 Loop time of 127.263 on 1 procs for 1000 steps with 4000 atoms Performance: 0.679 ns/day, 35.351 hours/ns, 7.858 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 126.23 | 126.23 | 126.23 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20128 | 0.20128 | 0.20128 | 0.0 | 0.16 Output | 0.0001743 | 0.0001743 | 0.0001743 | 0.0 | 0.00 Modify | 0.72624 | 0.72624 | 0.72624 | 0.0 | 0.57 Other | | 0.1056 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8248.00 ave 8248 max 8248 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 942330.0 ave 942330 max 942330 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 942330 Ave neighs/atom = 235.58250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.713454193435, Press = 23.9729893767009 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -12918.366 -12918.366 -13082.242 -13082.242 317.02928 317.02928 68197.234 68197.234 4.4113999 4.4113999 7000 -12924.858 -12924.858 -13085.741 -13085.741 311.23906 311.23906 68212.265 68212.265 -712.99491 -712.99491 Loop time of 126.04 on 1 procs for 1000 steps with 4000 atoms Performance: 0.685 ns/day, 35.011 hours/ns, 7.934 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 125.02 | 125.02 | 125.02 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20108 | 0.20108 | 0.20108 | 0.0 | 0.16 Output | 0.00022478 | 0.00022478 | 0.00022478 | 0.0 | 0.00 Modify | 0.71406 | 0.71406 | 0.71406 | 0.0 | 0.57 Other | | 0.1053 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8274.00 ave 8274 max 8274 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 941936.0 ave 941936 max 941936 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 941936 Ave neighs/atom = 235.48400 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.032755583716, Press = -31.344560662253 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -12924.858 -12924.858 -13085.741 -13085.741 311.23906 311.23906 68212.265 68212.265 -712.99491 -712.99491 8000 -12918.62 -12918.62 -13081.007 -13081.007 314.14858 314.14858 68206.128 68206.128 105.74384 105.74384 Loop time of 129.627 on 1 procs for 1000 steps with 4000 atoms Performance: 0.667 ns/day, 36.007 hours/ns, 7.714 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 128.6 | 128.6 | 128.6 | 0.0 | 99.21 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20226 | 0.20226 | 0.20226 | 0.0 | 0.16 Output | 0.00018539 | 0.00018539 | 0.00018539 | 0.0 | 0.00 Modify | 0.72162 | 0.72162 | 0.72162 | 0.0 | 0.56 Other | | 0.1053 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8234.00 ave 8234 max 8234 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 941734.0 ave 941734 max 941734 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 941734 Ave neighs/atom = 235.43350 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.186134732892, Press = 2.7029329450161 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -12918.62 -12918.62 -13081.007 -13081.007 314.14858 314.14858 68206.128 68206.128 105.74384 105.74384 9000 -12920.589 -12920.589 -13082.169 -13082.169 312.58624 312.58624 68175.814 68175.814 277.19081 277.19081 Loop time of 129.663 on 1 procs for 1000 steps with 4000 atoms Performance: 0.666 ns/day, 36.017 hours/ns, 7.712 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 128.63 | 128.63 | 128.63 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20473 | 0.20473 | 0.20473 | 0.0 | 0.16 Output | 0.00017879 | 0.00017879 | 0.00017879 | 0.0 | 0.00 Modify | 0.72559 | 0.72559 | 0.72559 | 0.0 | 0.56 Other | | 0.1064 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8269.00 ave 8269 max 8269 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 941706.0 ave 941706 max 941706 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 941706 Ave neighs/atom = 235.42650 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.013691204575, Press = -12.8028730645225 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -12920.589 -12920.589 -13082.169 -13082.169 312.58624 312.58624 68175.814 68175.814 277.19081 277.19081 10000 -12924.189 -12924.189 -13084.984 -13084.984 311.06814 311.06814 68196.21 68196.21 -408.05545 -408.05545 Loop time of 125.814 on 1 procs for 1000 steps with 4000 atoms Performance: 0.687 ns/day, 34.948 hours/ns, 7.948 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 124.79 | 124.79 | 124.79 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20063 | 0.20063 | 0.20063 | 0.0 | 0.16 Output | 0.0001844 | 0.0001844 | 0.0001844 | 0.0 | 0.00 Modify | 0.71583 | 0.71583 | 0.71583 | 0.0 | 0.57 Other | | 0.1052 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8267.00 ave 8267 max 8267 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 942258.0 ave 942258 max 942258 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 942258 Ave neighs/atom = 235.56450 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.606377598326, Press = -6.65378820621527 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -12924.189 -12924.189 -13084.984 -13084.984 311.06814 311.06814 68196.21 68196.21 -408.05545 -408.05545 11000 -12919.99 -12919.99 -13082.275 -13082.275 313.94991 313.94991 68176.16 68176.16 237.48749 237.48749 Loop time of 126.263 on 1 procs for 1000 steps with 4000 atoms Performance: 0.684 ns/day, 35.073 hours/ns, 7.920 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 125.25 | 125.25 | 125.25 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20043 | 0.20043 | 0.20043 | 0.0 | 0.16 Output | 0.00017865 | 0.00017865 | 0.00017865 | 0.0 | 0.00 Modify | 0.71278 | 0.71278 | 0.71278 | 0.0 | 0.56 Other | | 0.1039 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8256.00 ave 8256 max 8256 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 941732.0 ave 941732 max 941732 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 941732 Ave neighs/atom = 235.43300 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.529305667742, Press = -2.73730993419006 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -12919.99 -12919.99 -13082.275 -13082.275 313.94991 313.94991 68176.16 68176.16 237.48749 237.48749 12000 -12918.787 -12918.787 -13081.676 -13081.676 315.12045 315.12045 68206.81 68206.81 -83.174465 -83.174465 Loop time of 124.885 on 1 procs for 1000 steps with 4000 atoms Performance: 0.692 ns/day, 34.690 hours/ns, 8.007 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 123.86 | 123.86 | 123.86 | 0.0 | 99.18 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20168 | 0.20168 | 0.20168 | 0.0 | 0.16 Output | 0.00017938 | 0.00017938 | 0.00017938 | 0.0 | 0.00 Modify | 0.71795 | 0.71795 | 0.71795 | 0.0 | 0.57 Other | | 0.1052 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8281.00 ave 8281 max 8281 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 942314.0 ave 942314 max 942314 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 942314 Ave neighs/atom = 235.57850 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.450416430258, Press = -4.3414509491501 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -12918.787 -12918.787 -13081.676 -13081.676 315.12045 315.12045 68206.81 68206.81 -83.174465 -83.174465 13000 -12917.074 -12917.074 -13083.098 -13083.098 321.18336 321.18336 68224.42 68224.42 -367.02631 -367.02631 Loop time of 125.744 on 1 procs for 1000 steps with 4000 atoms Performance: 0.687 ns/day, 34.929 hours/ns, 7.953 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 124.72 | 124.72 | 124.72 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20094 | 0.20094 | 0.20094 | 0.0 | 0.16 Output | 0.00017527 | 0.00017527 | 0.00017527 | 0.0 | 0.00 Modify | 0.71745 | 0.71745 | 0.71745 | 0.0 | 0.57 Other | | 0.1049 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8234.00 ave 8234 max 8234 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 941812.0 ave 941812 max 941812 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 941812 Ave neighs/atom = 235.45300 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.572863949125, Press = -3.77344987414251 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -12917.074 -12917.074 -13083.098 -13083.098 321.18336 321.18336 68224.42 68224.42 -367.02631 -367.02631 14000 -12926.769 -12926.769 -13084.753 -13084.753 305.63103 305.63103 68060.898 68060.898 1680.4047 1680.4047 Loop time of 124.639 on 1 procs for 1000 steps with 4000 atoms Performance: 0.693 ns/day, 34.622 hours/ns, 8.023 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 123.63 | 123.63 | 123.63 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20081 | 0.20081 | 0.20081 | 0.0 | 0.16 Output | 0.00018077 | 0.00018077 | 0.00018077 | 0.0 | 0.00 Modify | 0.70767 | 0.70767 | 0.70767 | 0.0 | 0.57 Other | | 0.105 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8266.00 ave 8266 max 8266 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 941646.0 ave 941646 max 941646 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 941646 Ave neighs/atom = 235.41150 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.544633506899, Press = -2.23709195536036 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -12926.769 -12926.769 -13084.753 -13084.753 305.63103 305.63103 68060.898 68060.898 1680.4047 1680.4047 15000 -12924.073 -12924.073 -13082.116 -13082.116 305.74563 305.74563 68279.824 68279.824 -1476.5347 -1476.5347 Loop time of 128.355 on 1 procs for 1000 steps with 4000 atoms Performance: 0.673 ns/day, 35.654 hours/ns, 7.791 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.32 | 127.32 | 127.32 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20241 | 0.20241 | 0.20241 | 0.0 | 0.16 Output | 0.00017841 | 0.00017841 | 0.00017841 | 0.0 | 0.00 Modify | 0.72918 | 0.72918 | 0.72918 | 0.0 | 0.57 Other | | 0.1051 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8260.00 ave 8260 max 8260 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 943934.0 ave 943934 max 943934 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 943934 Ave neighs/atom = 235.98350 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.585731632215, Press = 0.616369189208757 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -12924.073 -12924.073 -13082.116 -13082.116 305.74563 305.74563 68279.824 68279.824 -1476.5347 -1476.5347 16000 -12922.565 -12922.565 -13083.113 -13083.113 310.59088 310.59088 68112.565 68112.565 1176.6595 1176.6595 Loop time of 127.516 on 1 procs for 1000 steps with 4000 atoms Performance: 0.678 ns/day, 35.421 hours/ns, 7.842 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 126.49 | 126.49 | 126.49 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20112 | 0.20112 | 0.20112 | 0.0 | 0.16 Output | 0.00018759 | 0.00018759 | 0.00018759 | 0.0 | 0.00 Modify | 0.71815 | 0.71815 | 0.71815 | 0.0 | 0.56 Other | | 0.104 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8240.00 ave 8240 max 8240 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 941000.0 ave 941000 max 941000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 941000 Ave neighs/atom = 235.25000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.695210841532, Press = -4.45518036870452 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -12922.565 -12922.565 -13083.113 -13083.113 310.59088 310.59088 68112.565 68112.565 1176.6595 1176.6595 17000 -12918.922 -12918.922 -13081.782 -13081.782 315.06361 315.06361 68252.545 68252.545 -723.54995 -723.54995 Loop time of 131.974 on 1 procs for 1000 steps with 4000 atoms Performance: 0.655 ns/day, 36.659 hours/ns, 7.577 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 130.92 | 130.92 | 130.92 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2052 | 0.2052 | 0.2052 | 0.0 | 0.16 Output | 0.0001832 | 0.0001832 | 0.0001832 | 0.0 | 0.00 Modify | 0.74472 | 0.74472 | 0.74472 | 0.0 | 0.56 Other | | 0.1058 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8247.00 ave 8247 max 8247 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 943538.0 ave 943538 max 943538 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 943538 Ave neighs/atom = 235.88450 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.802443253739, Press = 0.0782836435590099 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -12918.922 -12918.922 -13081.782 -13081.782 315.06361 315.06361 68252.545 68252.545 -723.54995 -723.54995 18000 -12922.787 -12922.787 -13081.632 -13081.632 307.29479 307.29479 68147.171 68147.171 761.5953 761.5953 Loop time of 129.701 on 1 procs for 1000 steps with 4000 atoms Performance: 0.666 ns/day, 36.028 hours/ns, 7.710 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 128.66 | 128.66 | 128.66 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20401 | 0.20401 | 0.20401 | 0.0 | 0.16 Output | 0.00018335 | 0.00018335 | 0.00018335 | 0.0 | 0.00 Modify | 0.73403 | 0.73403 | 0.73403 | 0.0 | 0.57 Other | | 0.1058 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8265.00 ave 8265 max 8265 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 941300.0 ave 941300 max 941300 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 941300 Ave neighs/atom = 235.32500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.00966110592, Press = -1.72526227399682 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -12922.787 -12922.787 -13081.632 -13081.632 307.29479 307.29479 68147.171 68147.171 761.5953 761.5953 19000 -12914.74 -12914.74 -13080.194 -13080.194 320.08293 320.08293 68225.091 68225.091 -113.42013 -113.42013 Loop time of 128.148 on 1 procs for 1000 steps with 4000 atoms Performance: 0.674 ns/day, 35.597 hours/ns, 7.804 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.12 | 127.12 | 127.12 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20083 | 0.20083 | 0.20083 | 0.0 | 0.16 Output | 0.00022752 | 0.00022752 | 0.00022752 | 0.0 | 0.00 Modify | 0.71797 | 0.71797 | 0.71797 | 0.0 | 0.56 Other | | 0.1058 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8253.00 ave 8253 max 8253 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 942656.0 ave 942656 max 942656 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 942656 Ave neighs/atom = 235.66400 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.087913112943, Press = -2.39535471842155 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -12914.74 -12914.74 -13080.194 -13080.194 320.08293 320.08293 68225.091 68225.091 -113.42013 -113.42013 20000 -12920.293 -12920.293 -13080.821 -13080.821 310.5517 310.5517 68221.312 68221.312 -272.46621 -272.46621 Loop time of 132.988 on 1 procs for 1000 steps with 4000 atoms Performance: 0.650 ns/day, 36.941 hours/ns, 7.519 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 131.93 | 131.93 | 131.93 | 0.0 | 99.21 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20558 | 0.20558 | 0.20558 | 0.0 | 0.15 Output | 0.00017792 | 0.00017792 | 0.00017792 | 0.0 | 0.00 Modify | 0.74264 | 0.74264 | 0.74264 | 0.0 | 0.56 Other | | 0.1063 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8250.00 ave 8250 max 8250 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 941722.0 ave 941722 max 941722 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 941722 Ave neighs/atom = 235.43050 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.0927162627, Press = -0.640575085161816 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -12920.293 -12920.293 -13080.821 -13080.821 310.5517 310.5517 68221.312 68221.312 -272.46621 -272.46621 21000 -12925.099 -12925.099 -13085.158 -13085.158 309.64517 309.64517 68073.393 68073.393 1419.5819 1419.5819 Loop time of 124.414 on 1 procs for 1000 steps with 4000 atoms Performance: 0.694 ns/day, 34.559 hours/ns, 8.038 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 123.4 | 123.4 | 123.4 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.19933 | 0.19933 | 0.19933 | 0.0 | 0.16 Output | 0.00017818 | 0.00017818 | 0.00017818 | 0.0 | 0.00 Modify | 0.70958 | 0.70958 | 0.70958 | 0.0 | 0.57 Other | | 0.1038 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8270.00 ave 8270 max 8270 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 941872.0 ave 941872 max 941872 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 941872 Ave neighs/atom = 235.46800 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.113572858656, Press = -1.41048893170435 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -12925.099 -12925.099 -13085.158 -13085.158 309.64517 309.64517 68073.393 68073.393 1419.5819 1419.5819 22000 -12920.879 -12920.879 -13082.902 -13082.902 313.44591 313.44591 68267.468 68267.468 -1186.8444 -1186.8444 Loop time of 129.06 on 1 procs for 1000 steps with 4000 atoms Performance: 0.669 ns/day, 35.850 hours/ns, 7.748 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 128.02 | 128.02 | 128.02 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20394 | 0.20394 | 0.20394 | 0.0 | 0.16 Output | 0.00018195 | 0.00018195 | 0.00018195 | 0.0 | 0.00 Modify | 0.72833 | 0.72833 | 0.72833 | 0.0 | 0.56 Other | | 0.1047 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8273.00 ave 8273 max 8273 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 943938.0 ave 943938 max 943938 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 943938 Ave neighs/atom = 235.98450 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.107571220642, Press = -1.18154545225639 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -12920.879 -12920.879 -13082.902 -13082.902 313.44591 313.44591 68267.468 68267.468 -1186.8444 -1186.8444 23000 -12922.028 -12922.028 -13086.252 -13086.252 317.70329 317.70329 68133.621 68133.621 514.19878 514.19878 Loop time of 126.317 on 1 procs for 1000 steps with 4000 atoms Performance: 0.684 ns/day, 35.088 hours/ns, 7.917 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 125.3 | 125.3 | 125.3 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20144 | 0.20144 | 0.20144 | 0.0 | 0.16 Output | 0.00018089 | 0.00018089 | 0.00018089 | 0.0 | 0.00 Modify | 0.71021 | 0.71021 | 0.71021 | 0.0 | 0.56 Other | | 0.1049 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8239.00 ave 8239 max 8239 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 940884.0 ave 940884 max 940884 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 940884 Ave neighs/atom = 235.22100 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.996407682638, Press = -1.49882032399246 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -12922.028 -12922.028 -13086.252 -13086.252 317.70329 317.70329 68133.621 68133.621 514.19878 514.19878 24000 -12925.298 -12925.298 -13084.496 -13084.496 307.97945 307.97945 68275.189 68275.189 -1610.7944 -1610.7944 Loop time of 133.4 on 1 procs for 1000 steps with 4000 atoms Performance: 0.648 ns/day, 37.056 hours/ns, 7.496 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 132.35 | 132.35 | 132.35 | 0.0 | 99.21 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20695 | 0.20695 | 0.20695 | 0.0 | 0.16 Output | 0.00017819 | 0.00017819 | 0.00017819 | 0.0 | 0.00 Modify | 0.74152 | 0.74152 | 0.74152 | 0.0 | 0.56 Other | | 0.1062 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8238.00 ave 8238 max 8238 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 942674.0 ave 942674 max 942674 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 942674 Ave neighs/atom = 235.66850 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.015009415695, Press = -1.48034356674255 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 10 ghost atom cutoff = 10 binsize = 5, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 10 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.005 | 7.005 | 7.005 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -12925.298 -12925.298 -13084.496 -13084.496 307.97945 307.97945 68275.189 68275.189 -1610.7944 -1610.7944 25000 -12920.075 -12920.075 -13080.915 -13080.915 311.15575 311.15575 68130.401 68130.401 1243.644 1243.644 Loop time of 128.84 on 1 procs for 1000 steps with 4000 atoms Performance: 0.671 ns/day, 35.789 hours/ns, 7.762 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.81 | 127.81 | 127.81 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20371 | 0.20371 | 0.20371 | 0.0 | 0.16 Output | 0.00023676 | 0.00023676 | 0.00023676 | 0.0 | 0.00 Modify | 0.72513 | 0.72513 | 0.72513 | 0.0 | 0.56 Other | | 0.1058 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8263.00 ave 8263 max 8263 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 941142.0 ave 941142 max 941142 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 941142 Ave neighs/atom = 235.28550 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 68187.156535282 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0