# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.025435209274292*${_u_distance} variable latticeconst_converted equal 4.025435209274292*1 lattice fcc ${latticeconst_converted} lattice fcc 4.02543520927429 Lattice spacing in x,y,z = 4.0254352 4.0254352 4.0254352 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (40.254352 40.254352 40.254352) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms create_atoms CPU = 0.001 seconds variable mass_converted equal 26.981538*${_u_mass} variable mass_converted equal 26.981538*1 kim_interactions Al #=== BEGIN kim_interactions ================================== variable kim_periodic equal 1 pair_style adp pair_coeff * * /tmp/kim-shared-library-parameter-file-directory-XXXXXXpJNmqE/Si_Au_Al.adp.txt Al #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 26.981538 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 65228.6698989212 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 65228.6698989212/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 65228.6698989212/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 65228.6698989212/(1*1*${_u_distance}) variable V0_metal equal 65228.6698989212/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 65228.6698989212*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 65228.6698989212 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 293.15*${_u_temperature} variable temp_converted equal 293.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 293.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "293.15 - 0.2" variable T_up equal "293.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8.1961461 ghost atom cutoff = 8.1961461 binsize = 4.0980731, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair adp, perpetual attributes: half, newton on pair build: half/bin/atomonly/newton stencil: half/bin/3d/newton bin: standard Per MPI rank memory allocation (min/avg/max) = 7.029 | 7.029 | 7.029 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -13372.489 -13372.489 -13524.021 -13524.021 293.15 293.15 65228.67 65228.67 2481.3404 2481.3404 1000 -13199.823 -13199.823 -13361.503 -13361.503 312.7797 312.7797 66985.045 66985.045 -1028.6426 -1028.6426 Loop time of 45.9832 on 1 procs for 1000 steps with 4000 atoms Performance: 1.879 ns/day, 12.773 hours/ns, 21.747 timesteps/s 37.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 45.36 | 45.36 | 45.36 | 0.0 | 98.65 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14531 | 0.14531 | 0.14531 | 0.0 | 0.32 Output | 6.13e-05 | 6.13e-05 | 6.13e-05 | 0.0 | 0.00 Modify | 0.4416 | 0.4416 | 0.4416 | 0.0 | 0.96 Other | | 0.03577 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 280000.0 ave 280000 max 280000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 280000 Ave neighs/atom = 70.000000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.029 | 7.029 | 7.029 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -13199.823 -13199.823 -13361.503 -13361.503 312.7797 312.7797 66985.045 66985.045 -1028.6426 -1028.6426 2000 -13218.227 -13218.227 -13365.04 -13365.04 284.01796 284.01796 66842.722 66842.722 -62.477042 -62.477042 Loop time of 45.9114 on 1 procs for 1000 steps with 4000 atoms Performance: 1.882 ns/day, 12.753 hours/ns, 21.781 timesteps/s 38.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 45.163 | 45.163 | 45.163 | 0.0 | 98.37 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13568 | 0.13568 | 0.13568 | 0.0 | 0.30 Output | 4.09e-05 | 4.09e-05 | 4.09e-05 | 0.0 | 0.00 Modify | 0.55234 | 0.55234 | 0.55234 | 0.0 | 1.20 Other | | 0.06017 | | | 0.13 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7666.00 ave 7666 max 7666 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 276474.0 ave 276474 max 276474 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 276474 Ave neighs/atom = 69.118500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.029 | 7.029 | 7.029 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -13218.227 -13218.227 -13365.04 -13365.04 284.01796 284.01796 66842.722 66842.722 -62.477042 -62.477042 3000 -13208.299 -13208.299 -13361.85 -13361.85 297.05443 297.05443 66840.412 66840.412 375.67421 375.67421 Loop time of 45.2124 on 1 procs for 1000 steps with 4000 atoms Performance: 1.911 ns/day, 12.559 hours/ns, 22.118 timesteps/s 38.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.679 | 44.679 | 44.679 | 0.0 | 98.82 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12163 | 0.12163 | 0.12163 | 0.0 | 0.27 Output | 5.23e-05 | 5.23e-05 | 5.23e-05 | 0.0 | 0.00 Modify | 0.37422 | 0.37422 | 0.37422 | 0.0 | 0.83 Other | | 0.03777 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7671.00 ave 7671 max 7671 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 276670.0 ave 276670 max 276670 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 276670 Ave neighs/atom = 69.167500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.029 | 7.029 | 7.029 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -13208.299 -13208.299 -13361.85 -13361.85 297.05443 297.05443 66840.412 66840.412 375.67421 375.67421 4000 -13213.724 -13213.724 -13364.553 -13364.553 291.78921 291.78921 66881.677 66881.677 -359.92493 -359.92493 Loop time of 45.9213 on 1 procs for 1000 steps with 4000 atoms Performance: 1.881 ns/day, 12.756 hours/ns, 21.776 timesteps/s 38.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 45.318 | 45.318 | 45.318 | 0.0 | 98.69 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1025 | 0.1025 | 0.1025 | 0.0 | 0.22 Output | 5.02e-05 | 5.02e-05 | 5.02e-05 | 0.0 | 0.00 Modify | 0.47864 | 0.47864 | 0.47864 | 0.0 | 1.04 Other | | 0.02219 | | | 0.05 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7659.00 ave 7659 max 7659 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 276609.0 ave 276609 max 276609 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 276609 Ave neighs/atom = 69.152250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.029 | 7.029 | 7.029 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -13213.724 -13213.724 -13364.553 -13364.553 291.78921 291.78921 66881.677 66881.677 -359.92493 -359.92493 5000 -13210.902 -13210.902 -13362.844 -13362.844 293.94295 293.94295 66908.314 66908.314 -489.92486 -489.92486 Loop time of 45.1976 on 1 procs for 1000 steps with 4000 atoms Performance: 1.912 ns/day, 12.555 hours/ns, 22.125 timesteps/s 39.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.529 | 44.529 | 44.529 | 0.0 | 98.52 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12419 | 0.12419 | 0.12419 | 0.0 | 0.27 Output | 5.86e-05 | 5.86e-05 | 5.86e-05 | 0.0 | 0.00 Modify | 0.4725 | 0.4725 | 0.4725 | 0.0 | 1.05 Other | | 0.07158 | | | 0.16 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7649.00 ave 7649 max 7649 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 276562.0 ave 276562 max 276562 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 276562 Ave neighs/atom = 69.140500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 295.744177538578, Press = 347.981966768415 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.029 | 7.029 | 7.029 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -13210.902 -13210.902 -13362.844 -13362.844 293.94295 293.94295 66908.314 66908.314 -489.92486 -489.92486 6000 -13212.455 -13212.455 -13364.727 -13364.727 294.58067 294.58067 66776.94 66776.94 790.58659 790.58659 Loop time of 37.6864 on 1 procs for 1000 steps with 4000 atoms Performance: 2.293 ns/day, 10.468 hours/ns, 26.535 timesteps/s 46.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.16 | 37.16 | 37.16 | 0.0 | 98.60 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.068014 | 0.068014 | 0.068014 | 0.0 | 0.18 Output | 3.82e-05 | 3.82e-05 | 3.82e-05 | 0.0 | 0.00 Modify | 0.42965 | 0.42965 | 0.42965 | 0.0 | 1.14 Other | | 0.02893 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7643.00 ave 7643 max 7643 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 276557.0 ave 276557 max 276557 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 276557 Ave neighs/atom = 69.139250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.107874621262, Press = 20.4651897469007 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.029 | 7.029 | 7.029 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -13212.455 -13212.455 -13364.727 -13364.727 294.58067 294.58067 66776.94 66776.94 790.58659 790.58659 7000 -13210.452 -13210.452 -13360.207 -13360.207 289.71138 289.71138 66883.734 66883.734 -8.5985056 -8.5985056 Loop time of 26.6663 on 1 procs for 1000 steps with 4000 atoms Performance: 3.240 ns/day, 7.407 hours/ns, 37.501 timesteps/s 66.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.319 | 26.319 | 26.319 | 0.0 | 98.70 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.071602 | 0.071602 | 0.071602 | 0.0 | 0.27 Output | 3.8e-05 | 3.8e-05 | 3.8e-05 | 0.0 | 0.00 Modify | 0.25349 | 0.25349 | 0.25349 | 0.0 | 0.95 Other | | 0.02168 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7673.00 ave 7673 max 7673 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 276683.0 ave 276683 max 276683 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 276683 Ave neighs/atom = 69.170750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.281841462474, Press = -15.4588720017181 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.029 | 7.029 | 7.029 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -13210.452 -13210.452 -13360.207 -13360.207 289.71138 289.71138 66883.734 66883.734 -8.5985056 -8.5985056 8000 -13212.294 -13212.294 -13361.874 -13361.874 289.37441 289.37441 66917.768 66917.768 -513.40916 -513.40916 Loop time of 25.8637 on 1 procs for 1000 steps with 4000 atoms Performance: 3.341 ns/day, 7.184 hours/ns, 38.664 timesteps/s 68.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.47 | 25.47 | 25.47 | 0.0 | 98.48 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.07147 | 0.07147 | 0.07147 | 0.0 | 0.28 Output | 3.13e-05 | 3.13e-05 | 3.13e-05 | 0.0 | 0.00 Modify | 0.2806 | 0.2806 | 0.2806 | 0.0 | 1.08 Other | | 0.04184 | | | 0.16 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7679.00 ave 7679 max 7679 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 276606.0 ave 276606 max 276606 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 276606 Ave neighs/atom = 69.151500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.11942168195, Press = 8.80930297426055 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.029 | 7.029 | 7.029 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -13212.294 -13212.294 -13361.874 -13361.874 289.37441 289.37441 66917.768 66917.768 -513.40916 -513.40916 9000 -13213.866 -13213.866 -13363.343 -13363.343 289.17263 289.17263 66768.374 66768.374 962.57636 962.57636 Loop time of 25.7847 on 1 procs for 1000 steps with 4000 atoms Performance: 3.351 ns/day, 7.162 hours/ns, 38.783 timesteps/s 68.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.353 | 25.353 | 25.353 | 0.0 | 98.33 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.072601 | 0.072601 | 0.072601 | 0.0 | 0.28 Output | 3.61e-05 | 3.61e-05 | 3.61e-05 | 0.0 | 0.00 Modify | 0.31728 | 0.31728 | 0.31728 | 0.0 | 1.23 Other | | 0.0417 | | | 0.16 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7640.00 ave 7640 max 7640 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 276544.0 ave 276544 max 276544 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 276544 Ave neighs/atom = 69.136000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.149985303613, Press = 4.32919457711437 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.029 | 7.029 | 7.029 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -13213.866 -13213.866 -13363.343 -13363.343 289.17263 289.17263 66768.374 66768.374 962.57636 962.57636 10000 -13210.214 -13210.214 -13361.703 -13361.703 293.0648 293.0648 66839.237 66839.237 357.33206 357.33206 Loop time of 28.3045 on 1 procs for 1000 steps with 4000 atoms Performance: 3.053 ns/day, 7.862 hours/ns, 35.330 timesteps/s 62.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.862 | 27.862 | 27.862 | 0.0 | 98.44 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.082426 | 0.082426 | 0.082426 | 0.0 | 0.29 Output | 3.67e-05 | 3.67e-05 | 3.67e-05 | 0.0 | 0.00 Modify | 0.33072 | 0.33072 | 0.33072 | 0.0 | 1.17 Other | | 0.02899 | | | 0.10 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7677.00 ave 7677 max 7677 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 276740.0 ave 276740 max 276740 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 276740 Ave neighs/atom = 69.185000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.066032543579, Press = -1.34615360038264 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.029 | 7.029 | 7.029 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -13210.214 -13210.214 -13361.703 -13361.703 293.0648 293.0648 66839.237 66839.237 357.33206 357.33206 11000 -13220.789 -13220.789 -13368.699 -13368.699 286.14303 286.14303 66909.689 66909.689 -1071.4415 -1071.4415 Loop time of 28.4388 on 1 procs for 1000 steps with 4000 atoms Performance: 3.038 ns/day, 7.900 hours/ns, 35.163 timesteps/s 62.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.021 | 28.021 | 28.021 | 0.0 | 98.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.071994 | 0.071994 | 0.071994 | 0.0 | 0.25 Output | 3.67e-05 | 3.67e-05 | 3.67e-05 | 0.0 | 0.00 Modify | 0.32356 | 0.32356 | 0.32356 | 0.0 | 1.14 Other | | 0.02185 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7697.00 ave 7697 max 7697 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 276716.0 ave 276716 max 276716 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 276716 Ave neighs/atom = 69.179000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.921093283182, Press = 1.29436145969581 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.029 | 7.029 | 7.029 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -13220.789 -13220.789 -13368.699 -13368.699 286.14303 286.14303 66909.689 66909.689 -1071.4415 -1071.4415 12000 -13210.999 -13210.999 -13365.451 -13365.451 298.79668 298.79668 66853.018 66853.018 -42.413823 -42.413823 Loop time of 32.1323 on 1 procs for 1000 steps with 4000 atoms Performance: 2.689 ns/day, 8.926 hours/ns, 31.121 timesteps/s 55.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 31.499 | 31.499 | 31.499 | 0.0 | 98.03 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11256 | 0.11256 | 0.11256 | 0.0 | 0.35 Output | 3.83e-05 | 3.83e-05 | 3.83e-05 | 0.0 | 0.00 Modify | 0.43093 | 0.43093 | 0.43093 | 0.0 | 1.34 Other | | 0.08988 | | | 0.28 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7648.00 ave 7648 max 7648 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 276566.0 ave 276566 max 276566 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 276566 Ave neighs/atom = 69.141500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.736174538437, Press = 6.78998134453553 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.029 | 7.029 | 7.029 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -13210.999 -13210.999 -13365.451 -13365.451 298.79668 298.79668 66853.018 66853.018 -42.413823 -42.413823 13000 -13215.893 -13215.893 -13365.698 -13365.698 289.80733 289.80733 66760.956 66760.956 846.74272 846.74272 Loop time of 30.1324 on 1 procs for 1000 steps with 4000 atoms Performance: 2.867 ns/day, 8.370 hours/ns, 33.187 timesteps/s 58.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.781 | 29.781 | 29.781 | 0.0 | 98.83 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.091304 | 0.091304 | 0.091304 | 0.0 | 0.30 Output | 4.02e-05 | 4.02e-05 | 4.02e-05 | 0.0 | 0.00 Modify | 0.23768 | 0.23768 | 0.23768 | 0.0 | 0.79 Other | | 0.02206 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7614.00 ave 7614 max 7614 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 276636.0 ave 276636 max 276636 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 276636 Ave neighs/atom = 69.159000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.678192573716, Press = 0.601000831404667 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.029 | 7.029 | 7.029 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -13215.893 -13215.893 -13365.698 -13365.698 289.80733 289.80733 66760.956 66760.956 846.74272 846.74272 14000 -13210.328 -13210.328 -13364.046 -13364.046 297.37779 297.37779 66970.687 66970.687 -1238.9174 -1238.9174 Loop time of 26.4164 on 1 procs for 1000 steps with 4000 atoms Performance: 3.271 ns/day, 7.338 hours/ns, 37.855 timesteps/s 67.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.1 | 26.1 | 26.1 | 0.0 | 98.80 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.061058 | 0.061058 | 0.061058 | 0.0 | 0.23 Output | 3.77e-05 | 3.77e-05 | 3.77e-05 | 0.0 | 0.00 Modify | 0.21321 | 0.21321 | 0.21321 | 0.0 | 0.81 Other | | 0.04172 | | | 0.16 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7617.00 ave 7617 max 7617 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 276763.0 ave 276763 max 276763 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 276763 Ave neighs/atom = 69.190750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.547063434337, Press = 0.364914852802416 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.029 | 7.029 | 7.029 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -13210.328 -13210.328 -13364.046 -13364.046 297.37779 297.37779 66970.687 66970.687 -1238.9174 -1238.9174 15000 -13214.461 -13214.461 -13365.011 -13365.011 291.24896 291.24896 66815.612 66815.612 263.31206 263.31206 Loop time of 26.9841 on 1 procs for 1000 steps with 4000 atoms Performance: 3.202 ns/day, 7.496 hours/ns, 37.059 timesteps/s 66.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.572 | 26.572 | 26.572 | 0.0 | 98.47 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.072243 | 0.072243 | 0.072243 | 0.0 | 0.27 Output | 3.77e-05 | 3.77e-05 | 3.77e-05 | 0.0 | 0.00 Modify | 0.31741 | 0.31741 | 0.31741 | 0.0 | 1.18 Other | | 0.02242 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7629.00 ave 7629 max 7629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 276432.0 ave 276432 max 276432 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 276432 Ave neighs/atom = 69.108000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.570871161013, Press = 4.46855490314361 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.029 | 7.029 | 7.029 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -13214.461 -13214.461 -13365.011 -13365.011 291.24896 291.24896 66815.612 66815.612 263.31206 263.31206 16000 -13211.647 -13211.647 -13364.274 -13364.274 295.26817 295.26817 66819.112 66819.112 378.05105 378.05105 Loop time of 29.5581 on 1 procs for 1000 steps with 4000 atoms Performance: 2.923 ns/day, 8.211 hours/ns, 33.832 timesteps/s 59.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.065 | 29.065 | 29.065 | 0.0 | 98.33 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.091969 | 0.091969 | 0.091969 | 0.0 | 0.31 Output | 2.96e-05 | 2.96e-05 | 2.96e-05 | 0.0 | 0.00 Modify | 0.3795 | 0.3795 | 0.3795 | 0.0 | 1.28 Other | | 0.02206 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7646.00 ave 7646 max 7646 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 276702.0 ave 276702 max 276702 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 276702 Ave neighs/atom = 69.175500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.670691379333, Press = -0.410611883219524 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.029 | 7.029 | 7.029 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -13211.647 -13211.647 -13364.274 -13364.274 295.26817 295.26817 66819.112 66819.112 378.05105 378.05105 17000 -13208.486 -13208.486 -13361.757 -13361.757 296.51289 296.51289 66950.124 66950.124 -799.40184 -799.40184 Loop time of 27.7632 on 1 procs for 1000 steps with 4000 atoms Performance: 3.112 ns/day, 7.712 hours/ns, 36.019 timesteps/s 64.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.475 | 27.475 | 27.475 | 0.0 | 98.96 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.051815 | 0.051815 | 0.051815 | 0.0 | 0.19 Output | 3.5e-05 | 3.5e-05 | 3.5e-05 | 0.0 | 0.00 Modify | 0.2149 | 0.2149 | 0.2149 | 0.0 | 0.77 Other | | 0.02179 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7692.00 ave 7692 max 7692 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 276711.0 ave 276711 max 276711 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 276711 Ave neighs/atom = 69.177750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.745881927673, Press = 0.390239835910773 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.029 | 7.029 | 7.029 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -13208.486 -13208.486 -13361.757 -13361.757 296.51289 296.51289 66950.124 66950.124 -799.40184 -799.40184 18000 -13213.956 -13213.956 -13364.2 -13364.2 290.65668 290.65668 66815.492 66815.492 371.52879 371.52879 Loop time of 28.1478 on 1 procs for 1000 steps with 4000 atoms Performance: 3.070 ns/day, 7.819 hours/ns, 35.527 timesteps/s 64.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.738 | 27.738 | 27.738 | 0.0 | 98.54 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.072526 | 0.072526 | 0.072526 | 0.0 | 0.26 Output | 3.86e-05 | 3.86e-05 | 3.86e-05 | 0.0 | 0.00 Modify | 0.29506 | 0.29506 | 0.29506 | 0.0 | 1.05 Other | | 0.04195 | | | 0.15 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7651.00 ave 7651 max 7651 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 276490.0 ave 276490 max 276490 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 276490 Ave neighs/atom = 69.122500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.843910102825, Press = 1.50440704264614 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.029 | 7.029 | 7.029 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -13213.956 -13213.956 -13364.2 -13364.2 290.65668 290.65668 66815.492 66815.492 371.52879 371.52879 19000 -13212.789 -13212.789 -13364.224 -13364.224 292.96017 292.96017 66852.395 66852.395 -15.127509 -15.127509 Loop time of 27.3222 on 1 procs for 1000 steps with 4000 atoms Performance: 3.162 ns/day, 7.590 hours/ns, 36.600 timesteps/s 64.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.992 | 26.992 | 26.992 | 0.0 | 98.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.071369 | 0.071369 | 0.071369 | 0.0 | 0.26 Output | 3.68e-05 | 3.68e-05 | 3.68e-05 | 0.0 | 0.00 Modify | 0.23726 | 0.23726 | 0.23726 | 0.0 | 0.87 Other | | 0.02168 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7650.00 ave 7650 max 7650 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 276623.0 ave 276623 max 276623 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 276623 Ave neighs/atom = 69.155750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.94780947577, Press = 0.408002278732831 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.029 | 7.029 | 7.029 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -13212.789 -13212.789 -13364.224 -13364.224 292.96017 292.96017 66852.395 66852.395 -15.127509 -15.127509 20000 -13212.836 -13212.836 -13364.769 -13364.769 293.92429 293.92429 66841.697 66841.697 77.455381 77.455381 Loop time of 27.3548 on 1 procs for 1000 steps with 4000 atoms Performance: 3.158 ns/day, 7.599 hours/ns, 36.557 timesteps/s 64.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.051 | 27.051 | 27.051 | 0.0 | 98.89 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.083954 | 0.083954 | 0.083954 | 0.0 | 0.31 Output | 3.03e-05 | 3.03e-05 | 3.03e-05 | 0.0 | 0.00 Modify | 0.19765 | 0.19765 | 0.19765 | 0.0 | 0.72 Other | | 0.02186 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7698.00 ave 7698 max 7698 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 276584.0 ave 276584 max 276584 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 276584 Ave neighs/atom = 69.146000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.952885155995, Press = 1.26303902692317 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.029 | 7.029 | 7.029 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -13212.836 -13212.836 -13364.769 -13364.769 293.92429 293.92429 66841.697 66841.697 77.455381 77.455381 21000 -13209.998 -13209.998 -13361.64 -13361.64 293.35984 293.35984 66849.508 66849.508 225.46732 225.46732 Loop time of 23.7988 on 1 procs for 1000 steps with 4000 atoms Performance: 3.630 ns/day, 6.611 hours/ns, 42.019 timesteps/s 74.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 23.498 | 23.498 | 23.498 | 0.0 | 98.74 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.054638 | 0.054638 | 0.054638 | 0.0 | 0.23 Output | 3.74e-05 | 3.74e-05 | 3.74e-05 | 0.0 | 0.00 Modify | 0.22335 | 0.22335 | 0.22335 | 0.0 | 0.94 Other | | 0.02288 | | | 0.10 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7686.00 ave 7686 max 7686 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 276596.0 ave 276596 max 276596 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 276596 Ave neighs/atom = 69.149000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.023213899189, Press = 0.40305948328839 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.029 | 7.029 | 7.029 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -13209.998 -13209.998 -13361.64 -13361.64 293.35984 293.35984 66849.508 66849.508 225.46732 225.46732 22000 -13215.97 -13215.97 -13364.904 -13364.904 288.12257 288.12257 66879.641 66879.641 -416.59202 -416.59202 Loop time of 25.4352 on 1 procs for 1000 steps with 4000 atoms Performance: 3.397 ns/day, 7.065 hours/ns, 39.316 timesteps/s 69.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 25.001 | 25.001 | 25.001 | 0.0 | 98.29 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11438 | 0.11438 | 0.11438 | 0.0 | 0.45 Output | 3.77e-05 | 3.77e-05 | 3.77e-05 | 0.0 | 0.00 Modify | 0.29798 | 0.29798 | 0.29798 | 0.0 | 1.17 Other | | 0.02215 | | | 0.09 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7637.00 ave 7637 max 7637 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 276625.0 ave 276625 max 276625 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 276625 Ave neighs/atom = 69.156250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T293.15.out" else "print 'not_converged' file output/vol_T293.15.out" print '${V}' file output/vol_T293.15.out 66856.1806825378 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0