/usr/local/lib/python3.8/dist-packages/ase/atoms.py:504: VisibleDeprecationWarning: Creating an ndarray from ragged nested sequences (which is a list-or-tuple of lists-or-tuples-or ndarrays with different lengths or shapes) is deprecated. If you meant to do this, you must specify 'dtype=object' when creating the ndarray. a = np.asarray(a) /scratch.hyperion/kim-jobs/jobs/dskarls/job-9ca33bbd-ad92-49ea-a55a-6329272d7e3e-007-bf98a528-617d-4535-ba31-39a9fe069f4d/VC_303890932454_004-and-MO_135739722270_001-1637518111/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/dskarls/job-9ca33bbd-ad92-49ea-a55a-6329272d7e3e-007-bf98a528-617d-4535-ba31-39a9fe069f4d/VC_303890932454_004-and-MO_135739722270_001-1637518111/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/dskarls/job-9ca33bbd-ad92-49ea-a55a-6329272d7e3e-007-bf98a528-617d-4535-ba31-39a9fe069f4d/VC_303890932454_004-and-MO_135739722270_001-1637518111/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/dskarls/job-9ca33bbd-ad92-49ea-a55a-6329272d7e3e-007-bf98a528-617d-4535-ba31-39a9fe069f4d/VC_303890932454_004-and-MO_135739722270_001-1637518111/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/dskarls/job-9ca33bbd-ad92-49ea-a55a-6329272d7e3e-007-bf98a528-617d-4535-ba31-39a9fe069f4d/VC_303890932454_004-and-MO_135739722270_001-1637518111/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:677: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead e.append(np.asscalar(val)) /usr/local/lib/python3.8/dist-packages/ase/atoms.py:504: VisibleDeprecationWarning: Creating an ndarray from ragged nested sequences (which is a list-or-tuple of lists-or-tuples-or ndarrays with different lengths or shapes) is deprecated. If you meant to do this, you must specify 'dtype=object' when creating the ndarray. a = np.asarray(a) /scratch.hyperion/kim-jobs/jobs/dskarls/job-9ca33bbd-ad92-49ea-a55a-6329272d7e3e-007-bf98a528-617d-4535-ba31-39a9fe069f4d/VC_303890932454_004-and-MO_135739722270_001-1637518111/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/dskarls/job-9ca33bbd-ad92-49ea-a55a-6329272d7e3e-007-bf98a528-617d-4535-ba31-39a9fe069f4d/VC_303890932454_004-and-MO_135739722270_001-1637518111/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/dskarls/job-9ca33bbd-ad92-49ea-a55a-6329272d7e3e-007-bf98a528-617d-4535-ba31-39a9fe069f4d/VC_303890932454_004-and-MO_135739722270_001-1637518111/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/dskarls/job-9ca33bbd-ad92-49ea-a55a-6329272d7e3e-007-bf98a528-617d-4535-ba31-39a9fe069f4d/VC_303890932454_004-and-MO_135739722270_001-1637518111/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:677: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead e.append(np.asscalar(val)) /usr/local/lib/python3.8/dist-packages/ase/atoms.py:504: VisibleDeprecationWarning: Creating an ndarray from ragged nested sequences (which is a list-or-tuple of lists-or-tuples-or ndarrays with different lengths or shapes) is deprecated. If you meant to do this, you must specify 'dtype=object' when creating the ndarray. a = np.asarray(a) /scratch.hyperion/kim-jobs/jobs/dskarls/job-9ca33bbd-ad92-49ea-a55a-6329272d7e3e-007-bf98a528-617d-4535-ba31-39a9fe069f4d/VC_303890932454_004-and-MO_135739722270_001-1637518111/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/dskarls/job-9ca33bbd-ad92-49ea-a55a-6329272d7e3e-007-bf98a528-617d-4535-ba31-39a9fe069f4d/VC_303890932454_004-and-MO_135739722270_001-1637518111/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/dskarls/job-9ca33bbd-ad92-49ea-a55a-6329272d7e3e-007-bf98a528-617d-4535-ba31-39a9fe069f4d/VC_303890932454_004-and-MO_135739722270_001-1637518111/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/dskarls/job-9ca33bbd-ad92-49ea-a55a-6329272d7e3e-007-bf98a528-617d-4535-ba31-39a9fe069f4d/VC_303890932454_004-and-MO_135739722270_001-1637518111/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:677: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead e.append(np.asscalar(val)) {"realtime":225.88,"usertime":223.13,"systime":1.67,"memmax":109388,"memavg":0}