/usr/local/lib/python3.8/dist-packages/ase/atoms.py:504: VisibleDeprecationWarning: Creating an ndarray from ragged nested sequences (which is a list-or-tuple of lists-or-tuples-or ndarrays with different lengths or shapes) is deprecated. If you meant to do this, you must specify 'dtype=object' when creating the ndarray. a = np.asarray(a) /scratch.hyperion/kim-jobs/jobs/dskarls/job-138c2a52-0fc9-4b19-95cc-718852764a62-007-f64e2678-3f80-4dfb-95d7-689d1ac29235/VC_303890932454_004-and-MO_152208847456_001-1639763613/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/dskarls/job-138c2a52-0fc9-4b19-95cc-718852764a62-007-f64e2678-3f80-4dfb-95d7-689d1ac29235/VC_303890932454_004-and-MO_152208847456_001-1639763613/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/dskarls/job-138c2a52-0fc9-4b19-95cc-718852764a62-007-f64e2678-3f80-4dfb-95d7-689d1ac29235/VC_303890932454_004-and-MO_152208847456_001-1639763613/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/dskarls/job-138c2a52-0fc9-4b19-95cc-718852764a62-007-f64e2678-3f80-4dfb-95d7-689d1ac29235/VC_303890932454_004-and-MO_152208847456_001-1639763613/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/dskarls/job-138c2a52-0fc9-4b19-95cc-718852764a62-007-f64e2678-3f80-4dfb-95d7-689d1ac29235/VC_303890932454_004-and-MO_152208847456_001-1639763613/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:677: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead e.append(np.asscalar(val)) /usr/local/lib/python3.8/dist-packages/ase/atoms.py:504: VisibleDeprecationWarning: Creating an ndarray from ragged nested sequences (which is a list-or-tuple of lists-or-tuples-or ndarrays with different lengths or shapes) is deprecated. If you meant to do this, you must specify 'dtype=object' when creating the ndarray. a = np.asarray(a) /scratch.hyperion/kim-jobs/jobs/dskarls/job-138c2a52-0fc9-4b19-95cc-718852764a62-007-f64e2678-3f80-4dfb-95d7-689d1ac29235/VC_303890932454_004-and-MO_152208847456_001-1639763613/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/dskarls/job-138c2a52-0fc9-4b19-95cc-718852764a62-007-f64e2678-3f80-4dfb-95d7-689d1ac29235/VC_303890932454_004-and-MO_152208847456_001-1639763613/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/dskarls/job-138c2a52-0fc9-4b19-95cc-718852764a62-007-f64e2678-3f80-4dfb-95d7-689d1ac29235/VC_303890932454_004-and-MO_152208847456_001-1639763613/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/dskarls/job-138c2a52-0fc9-4b19-95cc-718852764a62-007-f64e2678-3f80-4dfb-95d7-689d1ac29235/VC_303890932454_004-and-MO_152208847456_001-1639763613/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:677: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead e.append(np.asscalar(val)) /usr/local/lib/python3.8/dist-packages/ase/atoms.py:504: VisibleDeprecationWarning: Creating an ndarray from ragged nested sequences (which is a list-or-tuple of lists-or-tuples-or ndarrays with different lengths or shapes) is deprecated. If you meant to do this, you must specify 'dtype=object' when creating the ndarray. a = np.asarray(a) /scratch.hyperion/kim-jobs/jobs/dskarls/job-138c2a52-0fc9-4b19-95cc-718852764a62-007-f64e2678-3f80-4dfb-95d7-689d1ac29235/VC_303890932454_004-and-MO_152208847456_001-1639763613/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/dskarls/job-138c2a52-0fc9-4b19-95cc-718852764a62-007-f64e2678-3f80-4dfb-95d7-689d1ac29235/VC_303890932454_004-and-MO_152208847456_001-1639763613/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/dskarls/job-138c2a52-0fc9-4b19-95cc-718852764a62-007-f64e2678-3f80-4dfb-95d7-689d1ac29235/VC_303890932454_004-and-MO_152208847456_001-1639763613/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/dskarls/job-138c2a52-0fc9-4b19-95cc-718852764a62-007-f64e2678-3f80-4dfb-95d7-689d1ac29235/VC_303890932454_004-and-MO_152208847456_001-1639763613/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:677: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead e.append(np.asscalar(val)) {"realtime":16.31,"usertime":14.90,"systime":1.33,"memmax":57512,"memavg":0}