/usr/local/lib/python3.8/dist-packages/ase/atoms.py:504: VisibleDeprecationWarning: Creating an ndarray from ragged nested sequences (which is a list-or-tuple of lists-or-tuples-or ndarrays with different lengths or shapes) is deprecated. If you meant to do this, you must specify 'dtype=object' when creating the ndarray. a = np.asarray(a) /scratch.hyperion/kim-jobs/jobs/bwaters/job-fcfbf4c4-423e-4852-8ce0-d5672048b8b8-007-8bd344be-6711-4b9c-a596-1db15cd74a04/VC_303890932454_004-and-MO_268730733493_000-1659562991/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/bwaters/job-fcfbf4c4-423e-4852-8ce0-d5672048b8b8-007-8bd344be-6711-4b9c-a596-1db15cd74a04/VC_303890932454_004-and-MO_268730733493_000-1659562991/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/bwaters/job-fcfbf4c4-423e-4852-8ce0-d5672048b8b8-007-8bd344be-6711-4b9c-a596-1db15cd74a04/VC_303890932454_004-and-MO_268730733493_000-1659562991/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/bwaters/job-fcfbf4c4-423e-4852-8ce0-d5672048b8b8-007-8bd344be-6711-4b9c-a596-1db15cd74a04/VC_303890932454_004-and-MO_268730733493_000-1659562991/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:596: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead nth[n], np.asscalar(val), yesno[is_continuous] /scratch.hyperion/kim-jobs/jobs/bwaters/job-fcfbf4c4-423e-4852-8ce0-d5672048b8b8-007-8bd344be-6711-4b9c-a596-1db15cd74a04/VC_303890932454_004-and-MO_268730733493_000-1659562991/staged_job_files/repository/vc/DimerContinuityC1__VC_303890932454_004/runner:677: DeprecationWarning: np.asscalar(a) is deprecated since NumPy v1.16, use a.item() instead e.append(np.asscalar(val)) {"realtime":10.47,"usertime":9.39,"systime":1.42,"memmax":74888,"memavg":0}