!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !!!!! !!!!! !!!!! VERIFICATION CHECK: vc-memory-leak !!!!! !!!!! !!!!! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! Description: Check that the model has no memory leaks. This is tested using the Valgrind memory debugging tool (http://valgrind.org) by performing a series of energy and force calculations on a randomly distorted face-centered cubic (FCC) cube base structure for both non-periodic and periodic boundary conditions. Separate configurations are tested for each species supported by the model, as well as one containing a random distribution of all species. Configurations used for testing are provided as auxiliary files. Author: Ellad Tadmor ----------------------------------------------------------------------------------------------------- Results for KIM Model : EMT_Asap_MetalGlass_PaduraruKenoufiBailey_2007_CuZr__MO_987541074959_000 Supported species : Cu Zr random seed = 13 lattice constant (orig) = 3.000 perturbation amplitude = 0.300 number unit cells per side = 2 ----------------------------------------------------------------------------------------------------- MONOATOMIC STRUCTURE (pbc=False)-- Species = Cu (Configuration in file "config-F-Cu.xyz") ----------------------------------------------------------------------------------------------------- Energy = 2.95497578037 Forces: 1 -4.23085826e+00 -7.09309790e+00 -7.51077355e+00 2 -4.66357341e+00 7.91284749e+00 -4.60152763e+00 3 6.20185788e+00 -8.94876431e+00 -4.37683859e+00 4 -6.61208012e+00 6.58444838e+00 4.68151609e+00 5 1.76871530e+00 -1.35229738e+01 -3.44533165e-01 6 6.53657109e+00 5.83016207e+00 -5.02094184e+00 7 3.67862237e+00 -2.60010810e+01 -2.53201582e+01 8 -1.33143915e+01 -8.76419671e+00 -5.11172059e+00 9 -9.60825802e+00 -6.27402684e+00 -1.49373818e+01 10 -4.04315307e+00 1.61498348e+01 -1.67277006e+01 11 -2.98309523e+00 -1.13179040e+01 1.37855372e+01 12 -6.15663392e+00 7.56832643e+00 6.90778324e+00 13 -6.57141410e+00 -1.26346739e+01 -3.36447496e+01 14 5.49418390e+00 7.60217300e+00 -4.49905192e+00 15 3.02942707e+01 -4.28596765e+00 1.01131646e+01 16 4.92479727e+00 2.23428960e+01 1.36327729e+01 17 -1.16510029e+01 -5.67437488e+00 -4.05367449e+00 18 3.77599345e+00 1.01420667e+01 5.85991406e-01 19 3.16130592e+00 -1.21728327e+01 6.01219458e+00 20 -4.30874457e+00 6.47840626e+00 5.88106984e+00 21 -1.03346899e+01 -7.96867125e+00 7.40595986e+00 22 1.71845422e+01 2.25974397e+01 1.82607579e+01 23 2.40525161e+00 -1.42904389e+00 6.87638064e+00 24 5.05599586e+00 5.63460172e+00 4.63194183e+00 25 -1.15472921e+01 -9.99397931e+00 -1.45487436e+01 26 -4.30522530e+00 1.48920596e+01 -9.95424956e+00 27 1.85694765e+01 -2.95480502e+01 1.49199140e+01 28 -2.50973042e+01 2.60517458e+01 8.84827112e+00 29 -7.88800162e+00 -6.54809199e+00 6.40757051e+00 30 5.54897298e+00 1.06263841e+01 -8.34049863e-01 31 1.16317483e+01 -9.73280255e+00 1.05555055e+01 32 7.08341294e+00 1.14971408e+01 1.19797637e+01 MONOATOMIC STRUCTURE (pbc=True)-- Species = Cu (Configuration in file "config-T-Cu.xyz") ----------------------------------------------------------------------------------------------------- Energy = 51.7714535152 Forces: 1 1.25435065e+01 -1.26938813e+01 2.57688178e+00 2 -3.58789505e+01 6.41822108e+00 4.53822225e+01 3 5.34290411e+00 2.54359851e-01 -3.24897042e+00 4 -9.84228278e-01 7.42025294e+00 8.10130126e-01 5 7.16761936e+00 -8.59115069e+00 4.50616903e+00 6 -1.55056931e+01 2.96229735e+01 3.12860233e+01 7 -3.95258870e-01 -2.30490878e+01 -2.53620586e+01 8 -1.23232480e+01 -9.36044941e+00 -5.55932915e+00 9 -1.81118019e+01 -1.70188325e+01 1.23277388e+01 10 -9.70635271e+00 9.35346648e+00 -8.81081162e+00 11 -3.70447680e+00 -1.04089890e+01 1.22400911e+01 12 5.58598183e+00 1.20207775e+00 1.23243866e+01 13 -5.93584689e+00 -1.35413336e+01 -2.92180838e+01 14 -8.34954336e+00 5.66291041e+00 -1.10484511e+01 15 2.75957555e+01 -4.82076108e+00 9.74033113e+00 16 5.85285723e+00 1.90069398e+01 1.27060511e+01 17 8.16026357e+00 -1.46147103e+01 -2.47977516e+00 18 3.11233246e+00 9.07782865e+00 1.38495225e+00 19 2.32374141e+00 -1.14150847e+00 5.92441026e+00 20 2.94020084e+01 2.94010213e+01 -3.18590693e+00 21 -9.97009923e+00 -2.43020927e+00 7.94517755e+00 22 7.59689637e-01 3.26183476e+01 1.65663899e+01 23 -2.62098142e+01 -3.72908408e+01 -2.93265277e+01 24 3.54231528e+01 1.13583222e+01 -4.74417168e+01 25 -6.49858312e+00 -1.12565183e+01 -1.34016200e+01 26 -3.52314654e+00 4.90766557e+00 -1.11698518e+01 27 2.82627822e+01 -2.75028930e+01 -4.12358306e+00 28 -2.50877631e+01 2.88129363e+01 -2.01226266e+00 29 -7.45318646e+00 -5.68167340e+00 6.92374898e+00 30 -7.37129606e-01 5.46314034e+00 4.93147330e-01 31 9.17960070e+00 -1.00772604e+01 9.68178587e+00 32 9.66292687e+00 8.89963565e+00 3.56931134e+00 MONOATOMIC STRUCTURE (pbc=False)-- Species = Zr (Configuration in file "config-F-Zr.xyz") ----------------------------------------------------------------------------------------------------- Energy = 189.751330758 Forces: 1 -1.59300996e+01 -1.81434436e+01 -1.47859266e+01 2 2.21747533e+01 4.07560092e+00 -2.82246984e+01 3 1.68490060e+01 -2.69569525e+01 -8.53200496e+00 4 -3.18673669e+01 2.57945781e+01 3.90261517e+00 5 2.45089021e+00 -1.31747396e+01 -1.49919550e+01 6 1.85989196e+01 -7.85945853e+00 -1.08240650e+01 7 1.93857644e+01 -1.79390851e+01 -9.06826907e+00 8 -8.43320015e+00 1.75660712e+01 -9.39992044e+00 9 -2.79670477e+01 -6.21912173e+00 -2.30625333e+01 10 -7.66149488e-01 2.25976372e+01 -4.38968751e+01 11 3.22639648e+01 -3.55052325e+01 2.20975755e+01 12 -4.28755710e+01 4.13662664e+01 1.58412730e+00 13 -2.68959798e+00 5.74189635e+00 -1.18583327e+01 14 1.91011283e+01 7.30578160e+00 -1.33695636e+01 15 1.58249016e+01 1.39985450e+01 -1.90733512e+01 16 7.15685501e+00 1.63189480e+01 1.62901584e+01 17 -3.84937843e+01 -3.95548945e+01 1.94102142e+01 18 2.61618415e+01 7.37416359e+00 -2.08222601e+01 19 1.83684612e+00 -2.52105946e+01 2.41650009e+01 20 -4.54377550e+01 -9.50457905e+00 2.23281095e+01 21 -1.24167761e+01 -4.09447066e+01 -1.18189489e+01 22 2.18588254e+01 -1.11031302e+01 1.57832184e+01 23 2.34661190e+01 -1.62654247e+01 1.60710064e+01 24 -1.56476776e+01 3.39797007e+01 3.47435800e+01 25 -2.96838576e+01 -1.30785600e+01 -1.24861183e+01 26 1.56748661e+01 2.42969113e+01 7.82196259e+00 27 3.39685675e+01 1.56509183e+01 2.30124258e+01 28 -1.15874413e+01 2.14491583e+01 2.82165152e+01 29 -2.34903783e+01 -1.24107649e+01 -1.41063832e+01 30 2.04252362e+01 2.58993312e+01 -6.86899355e+00 31 1.90174784e+01 -4.83320686e+00 1.84421076e+01 32 -8.92926043e+00 1.52883869e+01 1.93215823e+01 MONOATOMIC STRUCTURE (pbc=True)-- Species = Zr (Configuration in file "config-T-Zr.xyz") ----------------------------------------------------------------------------------------------------- Energy = 367.259620724 Forces: 1 -3.96843195e+00 -8.17003308e+00 1.27136596e+01 2 2.11999719e+01 2.33945938e+00 -1.87338821e+01 3 7.41601520e+00 1.56384024e+01 -1.57480644e+01 4 -1.49579454e+01 1.49865320e+01 2.09834305e-01 5 -6.11285420e-01 2.67838057e+01 -8.30629454e+00 6 5.27292611e+00 6.16372951e+00 2.85185052e+01 7 4.45265769e+00 1.10314145e+01 -1.79797523e+01 8 -6.38607918e+00 1.59489024e+01 -1.00339342e+01 9 3.40400212e+00 -9.55766768e+00 -3.52644827e+00 10 -1.73645011e+00 5.38296718e+00 -1.64204945e+01 11 2.99377653e+01 -3.08927802e+01 1.86882896e+01 12 -2.74418109e+01 2.44389731e+01 -9.67506537e-01 13 -6.27559772e+00 -2.60868518e+00 9.79588620e+00 14 7.87287001e+00 1.41490631e+00 -1.60556114e-01 15 -1.43292034e+01 1.00670722e+01 -8.86011875e+00 16 1.52456979e+01 -2.42591549e+01 2.36715041e+01 17 -3.11480797e+01 -9.82255335e+00 1.87805909e+01 18 2.30744047e+01 5.57564130e+00 -1.77514208e+01 19 9.03128053e+00 -3.85189186e+00 5.52627537e+00 20 -1.68011295e+01 -1.17402187e+01 7.58791246e+00 21 -1.15031371e+01 -2.42161181e+01 -1.08419228e+01 22 5.33600032e+00 -1.01282863e+01 1.08053524e+01 23 1.12747197e+01 -2.45160079e+01 -1.42571151e+01 24 -2.04110314e+01 2.66526356e+01 8.57249959e+00 25 -4.17980708e+00 -1.14294974e+01 -7.53265654e+00 26 2.02405864e+01 -2.12258224e+01 2.03562087e+01 27 2.83100687e+01 1.53250934e+01 1.18755888e+01 28 -5.66064074e+00 1.68808954e+01 -2.49883174e-01 29 -2.00666201e+01 -9.58796497e+00 -1.22450645e+01 30 6.34679878e+00 -4.13224807e-01 8.51166910e+00 31 -1.00388275e+01 2.24462982e+00 -7.07536384e+00 32 -2.89968803e+00 1.54484654e+00 -1.49232980e+01 MIXED STRUCTURE (pbc=False)-- Species = Cu Zr (Configuration in file "config-F-CuZr.xyz") ----------------------------------------------------------------------------------------------------- Energy = 50.6222132565 Forces: 1 -4.02947870e+00 -3.62879809e+00 -7.19290070e+00 2 -5.23586776e+00 -1.29016646e+01 -8.73454906e+00 3 9.78640148e+00 -7.82060124e+00 -6.77598004e+00 4 -2.02575948e+01 -1.05019196e+01 -3.11915122e+01 5 -9.51104077e-01 -3.28815513e+00 -1.71643759e+00 6 1.19898434e+01 -2.17992309e+00 -1.62800130e+01 7 2.14271861e+01 -2.33036811e+01 -1.87713770e+01 8 -3.19816024e+01 6.34507463e+00 -2.20222166e+01 9 -7.40620525e+00 -2.74262740e+00 -6.94521246e+00 10 -2.03178579e+01 2.90391050e+01 -1.18564890e+01 11 -1.91834850e+01 -7.01651735e+00 2.59299661e+01 12 -1.71949555e+01 7.36211167e+00 -1.51959291e+01 13 2.95529633e+01 -1.59650263e+01 -3.03634607e+01 14 8.17634810e+00 1.24438474e+01 -1.20833642e+01 15 3.10896768e+01 -2.20320346e+01 5.48777827e+00 16 -1.97074062e+01 3.73934096e+01 -6.32993566e+00 17 -1.83075455e+01 -3.35390486e+01 1.13856165e+01 18 3.63454937e+01 1.77765086e+01 3.37273336e+00 19 -9.38974473e+00 -1.87806669e+01 3.60309398e+00 20 -2.29526103e+01 -8.80101183e+00 1.37472324e+01 21 -2.51826246e+01 -1.79732690e+01 1.11861965e+01 22 3.44482122e+01 1.86733238e+01 3.41467480e+01 23 4.05201766e+00 -5.71239574e+00 6.55778940e+00 24 5.67285682e+00 6.71730725e+00 2.76768983e+00 25 -1.05956697e+01 2.34638008e+01 1.22102917e+01 26 1.55350001e+01 8.56627955e+00 1.44598262e+01 27 1.54961270e+01 1.09105360e+01 5.88054368e+00 28 -1.04745141e+01 5.77755575e+00 9.76757631e+00 29 -2.11039753e+01 -1.78761015e+01 -1.63750630e+01 30 2.39673939e+01 1.67653564e+01 7.00154698e+00 31 2.63997537e+01 -4.83880343e+00 2.33278240e+01 32 -9.66703257e+00 1.76680290e+01 2.10019869e+01 MIXED STRUCTURE (pbc=True)-- Species = Cu Zr (Configuration in file "config-T-CuZr.xyz") ----------------------------------------------------------------------------------------------------- Energy = 170.442098866 Forces: 1 2.90507838e+01 9.23092713e+00 8.69231328e-01 2 -7.47059985e+00 -1.20999453e+01 1.22247049e+01 3 1.39115171e+01 7.80329672e+00 -1.41431992e+01 4 1.43962772e+01 -3.92320153e+00 -2.03063813e+01 5 4.49346481e+00 1.25591451e+01 2.63557961e+01 6 -1.10980914e+01 1.37637254e+00 -1.12307715e+01 7 1.84904481e+00 4.14418042e+00 -2.35233332e+01 8 -2.92214174e+01 4.84532098e+00 -2.18728805e+01 9 -4.23994645e-01 -2.30256941e+00 9.89288350e-01 10 -4.10192597e+01 1.86766384e+01 1.05491739e+01 11 -1.80462852e+01 -5.46523337e+00 2.39296154e+01 12 -2.80786372e+00 -1.27319549e+01 -7.88500130e+00 13 2.22602903e+01 -2.18433891e+01 -2.28096174e+00 14 -9.33216150e+00 -1.01790534e+01 -5.59951321e+00 15 9.19321911e+00 -1.63979804e+01 -9.51258810e-01 16 -2.15600692e+01 3.74560753e+00 -1.96230981e+01 17 -1.10930094e+01 -1.78322332e+01 1.49756750e+01 18 3.35921664e+01 1.68491709e+01 3.62383095e+00 19 -1.81957558e+01 -1.28311205e+01 -9.50035742e+00 20 -2.28026563e-01 -3.38478965e-01 8.59218586e-01 21 -3.24138118e+01 1.48893740e+01 1.97872621e+01 22 1.47655335e+01 1.27541427e+01 3.83738620e+01 23 -1.10700027e+01 1.93941235e+00 -1.47187234e+01 24 1.13446521e+01 7.48019903e+00 -1.14801107e+01 25 2.22423375e+00 1.89897058e+01 1.65230257e+01 26 1.80674123e+01 -1.12218913e+01 2.04276272e+01 27 1.12429673e+01 1.13345990e+01 -9.48644099e+00 28 5.78283504e+00 6.56870916e-01 1.16338899e+01 29 -1.79596832e+01 -1.45685684e+01 -1.35249745e+01 30 1.14531329e+01 -1.00299949e+01 9.83567873e+00 31 1.80139357e+01 -1.21798517e+00 5.41880889e+00 32 1.02985661e+01 5.70863604e+00 -3.02496833e+01 ================================================================================ VALGRIND OUTPUT ================================================================================ ==4913== Memcheck, a memory error detector ==4913== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==4913== Using Valgrind-3.13.0 and LibVEX; rerun with -h for copyright info ==4913== Command: python runner2.py EMT_Asap_MetalGlass_PaduraruKenoufiBailey_2007_CuZr__MO_987541074959_000 ==4913== ==4913== Conditional jump or move depends on uninitialised value(s) ==4913== at 0x1FAC44: PyGrammar_AddAccelerators (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FA2EE: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== ==4913== Use of uninitialised value of size 8 ==4913== at 0x1FAC54: PyGrammar_AddAccelerators (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FA2EE: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x1FAC3A: PyGrammar_AddAccelerators (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FA2EE: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== Address 0x6021020 is 320 bytes inside a block of size 676 free'd ==4913== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1FAC6F: PyGrammar_AddAccelerators (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FA2EE: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== Block was alloc'd at ==4913== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1FAD7E: PyGrammar_AddAccelerators (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FA2EE: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== ==4913== Conditional jump or move depends on uninitialised value(s) ==4913== at 0x1F752D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== ==4913== Use of uninitialised value of size 8 ==4913== at 0x1F7545: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x2233EA: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x20A37D: PyNode_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F5B8B: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== Address 0x608d020 is 8,064 bytes inside a block of size 8,345 free'd ==4913== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x20ACE5: PyTokenizer_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F9701: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== Block was alloc'd at ==4913== at 0x4C31D2F: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1FD2F4: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F88E3: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x222E34: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x20A37D: PyNode_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F5B8B: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== Address 0x608d020 is 8,064 bytes inside a block of size 8,345 free'd ==4913== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x20ACE5: PyTokenizer_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F9701: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== Block was alloc'd at ==4913== at 0x4C31D2F: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1FD2F4: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F88E3: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x222A55: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x20A37D: PyNode_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F5B8B: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== Address 0x608d020 is 8,064 bytes inside a block of size 8,345 free'd ==4913== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x20ACE5: PyTokenizer_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F9701: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== Block was alloc'd at ==4913== at 0x4C31D2F: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1FD2F4: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F88E3: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D0D3: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D185: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230709: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2309DA: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230842: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Address 0x60a1020 is 0 bytes inside a block of size 136 free'd ==4913== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1DCF74: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C2BC: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22A6F0: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224A51: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== Block was alloc'd at ==4913== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1D5798: PyList_New (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C147: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22A6F0: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224A51: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22FAB2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D0F5: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D15B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230709: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230976: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2308B8: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Address 0x60a3020 is 176 bytes inside a block of size 768 free'd ==4913== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x2389D4: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x238795: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230A9A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== Block was alloc'd at ==4913== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x15FB60: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D093: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D34F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x23A08A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D4C2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D1B9: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D185: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230709: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230E0D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2309DA: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D138: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D15B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230709: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2309DA: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2308B8: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Address 0x60a4020 is 256 bytes inside a block of size 768 free'd ==4913== at 0x4C31D2F: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22FAB2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D0F5: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D15B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230709: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230976: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2308B8: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Block was alloc'd at ==4913== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x15FB60: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22FAB2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D2AF: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x23061B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230890: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1EAF17: _PyString_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x235339: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230A8F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== Address 0x60aa020 is 0 bytes after a block of size 768 free'd ==4913== at 0x4C31D2F: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22FAB2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D19F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230709: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2309B6: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230E2B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2309DA: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2308B8: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Block was alloc'd at ==4913== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x15FB60: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D138: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D15B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D2AF: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D29B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x23061B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230976: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230E2B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2309DA: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2308B8: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1EAF17: _PyString_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x23461F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230A8F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== Address 0x60aa020 is 0 bytes after a block of size 768 free'd ==4913== at 0x4C31D2F: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22FAB2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D19F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230709: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2309B6: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230E2B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2309DA: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2308B8: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Block was alloc'd at ==4913== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x15FB60: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D138: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D15B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D2AF: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D29B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x23061B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230976: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230E2B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2309DA: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2308B8: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2391C6: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x231957: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== Address 0x60a1020 is 0 bytes inside a block of size 136 free'd ==4913== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1DCF74: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C2BC: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22A6F0: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224A51: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== Block was alloc'd at ==4913== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1D5798: PyList_New (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C147: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22A6F0: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224A51: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x240C2F: _PyObject_GC_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FD943: PyFrame_New (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x20316A: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203231: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203231: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Address 0x618e020 is 16 bytes before a block of size 744 alloc'd ==4913== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x156CE8: _PyObject_GC_Malloc (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FD98D: PyFrame_New (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x20316A: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203231: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Conditional jump or move depends on uninitialised value(s) ==4913== at 0x15FB13: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x240C2F: _PyObject_GC_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FD943: PyFrame_New (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x20316A: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203231: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203231: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Use of uninitialised value of size 8 ==4913== at 0x15FB20: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x240C2F: _PyObject_GC_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FD943: PyFrame_New (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x20316A: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203231: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203231: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Syscall param sched_getaffinity(mask) points to unaddressable byte(s) ==4913== at 0x4F3FF2F: sched_getaffinity@@GLIBC_2.3.4 (sched_getaffinity.c:36) ==4913== by 0x6EECB2B: get_num_procs (in /usr/local/lib/python2.7/dist-packages/numpy/.libs/libopenblasp-r0-382c8f3a.3.5.dev.so) ==4913== by 0x6EECC1C: blas_get_cpu_number (in /usr/local/lib/python2.7/dist-packages/numpy/.libs/libopenblasp-r0-382c8f3a.3.5.dev.so) ==4913== by 0x6CC3077: gotoblas_init (in /usr/local/lib/python2.7/dist-packages/numpy/.libs/libopenblasp-r0-382c8f3a.3.5.dev.so) ==4913== by 0x4010732: call_init (dl-init.c:72) ==4913== by 0x4010732: _dl_init (dl-init.c:119) ==4913== by 0x40151FE: dl_open_worker (dl-open.c:522) ==4913== by 0x4FA32DE: _dl_catch_exception (dl-error-skeleton.c:196) ==4913== by 0x40147C9: _dl_open (dl-open.c:605) ==4913== by 0x544CF95: dlopen_doit (dlopen.c:66) ==4913== by 0x4FA32DE: _dl_catch_exception (dl-error-skeleton.c:196) ==4913== by 0x4FA336E: _dl_catch_error (dl-error-skeleton.c:215) ==4913== by 0x544D734: _dlerror_run (dlerror.c:162) ==4913== Address 0x0 is not stack'd, malloc'd or (recently) free'd ==4913== ==4913== Invalid read of size 4 ==4913== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1EAF17: _PyString_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x253CBD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x25303C: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x205FE4: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Address 0x6416020 is 0 bytes inside a block of size 32 free'd ==4913== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x227ED7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x275F4B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x26A00F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203595: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Block was alloc'd at ==4913== at 0x4C2FA3F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x4C31D84: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1D6C0F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D68B4: PyList_Append (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x26A77D: Py_ReprEnter (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x275C9E: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x26A00F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203595: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1EAF17: _PyString_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2544D2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x25303C: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x205FE4: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Address 0x6416020 is 0 bytes inside a block of size 32 free'd ==4913== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x227ED7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x275F4B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x26A00F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203595: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Block was alloc'd at ==4913== at 0x4C2FA3F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x4C31D84: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1D6C0F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D68B4: PyList_Append (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x26A77D: Py_ReprEnter (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x275C9E: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x26A00F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203595: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2533D4: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x25303C: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x205FE4: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E9EC2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Address 0x6417020 is 768 bytes inside a block of size 1,685 free'd ==4913== at 0x4C31D2F: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1EAF17: _PyString_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2544D2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x25303C: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x205FE4: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Block was alloc'd at ==4913== at 0x4C31D2F: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1EAF17: _PyString_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x253CBD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x25303C: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x205FE4: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Conditional jump or move depends on uninitialised value(s) ==4913== at 0x1F752D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2594C9: PyParser_ASTFromString (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593B5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E9EC2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Use of uninitialised value of size 8 ==4913== at 0x1F7545: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2594C9: PyParser_ASTFromString (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593B5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E9EC2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x222E34: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x259489: PyParser_ASTFromString (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593B5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E9EC2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Address 0x6424020 is 34,064 bytes inside a block of size 36,032 free'd ==4913== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1F96DB: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2594C9: PyParser_ASTFromString (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593B5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Block was alloc'd at ==4913== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1F69EA: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2594C9: PyParser_ASTFromString (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593B5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22DBD2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x23061B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Address 0x642d020 is 128 bytes inside a block of size 308 free'd ==4913== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x23662A: PyCode_Optimize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x234862: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230A8F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF02: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Block was alloc'd at ==4913== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x2362FD: PyCode_Optimize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x234862: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230A8F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF02: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2391DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230ABE: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Address 0x20dbd020 is 16 bytes inside a block of size 100 free'd ==4913== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x23662A: PyCode_Optimize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x234862: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230A8F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE86: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Block was alloc'd at ==4913== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x2362FD: PyCode_Optimize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x234862: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230A8F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE86: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230648: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Address 0x20dbf020 is 96 bytes inside a block of size 296 free'd ==4913== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x23663A: PyCode_Optimize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x234862: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230A8F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF02: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Block was alloc'd at ==4913== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x236313: PyCode_Optimize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x234862: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230A8F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF02: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1EA774: PyString_FromFormatV (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x24DC28: PyString_FromFormat (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x6893800: ufunc_get_doc (ufunc_object.c:5860) ==4913== by 0x2133A8: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x15B161: _PyObject_GenericGetAttrWithDict (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FE5CF: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x217618: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2300DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Address 0x219d1020 is 1,440 bytes inside a block of size 4,097 free'd ==4913== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1E5F0D: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E74AD: PyObject_CallFunction (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E5962: PyImport_Import (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E587C: PyImport_ImportModule (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x689382B: npy_cache_import (npy_import.h:23) ==4913== by 0x689382B: ufunc_get_doc (ufunc_object.c:5840) ==4913== by 0x2133A8: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x15B161: _PyObject_GenericGetAttrWithDict (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FE5CF: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Block was alloc'd at ==4913== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1E5C57: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E74AD: PyObject_CallFunction (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E5962: PyImport_Import (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E587C: PyImport_ImportModule (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x689382B: npy_cache_import (npy_import.h:23) ==4913== by 0x689382B: ufunc_get_doc (ufunc_object.c:5840) ==4913== by 0x2133A8: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x15B161: _PyObject_GenericGetAttrWithDict (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FE5CF: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1EAF17: _PyString_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2497A1: PyString_Format (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FFCC2: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x217618: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2300DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22FCE9: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1EC86A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x20341F: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Address 0x21a3a020 is 16 bytes after a block of size 768 alloc'd ==4913== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1DA7D1: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1DB03B: PyDict_SetItemString (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D9572: PyType_Ready (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1ECDBC: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1EC794: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1EFDD1: PyObject_CallFunctionObjArgs (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2016F1: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Conditional jump or move depends on uninitialised value(s) ==4913== at 0x1F7B3A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2594C9: PyParser_ASTFromString (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593B5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E9EC2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Use of uninitialised value of size 8 ==4913== at 0x163E24: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2594C9: PyParser_ASTFromString (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593B5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E9EC2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Conditional jump or move depends on uninitialised value(s) ==4913== at 0x15FB13: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2391DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230ABE: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Use of uninitialised value of size 8 ==4913== at 0x15FB20: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2391DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230ABE: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Use of uninitialised value of size 8 ==4913== at 0x157C1C: PyObject_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x212203: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F45A7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6250: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x200C09: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Use of uninitialised value of size 8 ==4913== at 0x157C1C: PyObject_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x281C0E: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FE4C9: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x217618: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2300DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22FCE9: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1EC86A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x20341F: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x23D805: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FC3FA: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x217618: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2300DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22FCE9: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1EC86A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x20341F: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Address 0x21ce7020 is 3,792 bytes inside a block of size 5,037 free'd ==4913== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1EB16B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x20344C: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x217618: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2300DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22FCE9: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1EC86A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x20341F: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Block was alloc'd at ==4913== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1E1AB1: PyString_FromStringAndSize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x28249F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FE4C9: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x217618: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2300DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22FCE9: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1EC86A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x20341F: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Use of uninitialised value of size 8 ==4913== at 0x157C1C: PyObject_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x211FF5: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1EB16B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x212017: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F45A7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6250: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x200C09: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Use of uninitialised value of size 8 ==4913== at 0x157C1C: PyObject_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x212203: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1EB16B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x212017: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F45A7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E5E10: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x200C09: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x1F7521: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2594C9: PyParser_ASTFromString (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593B5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6250: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Address 0x63c9020 is 752 bytes inside a block of size 768 free'd ==4913== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1DA9C7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FF2D2: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E5E10: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Block was alloc'd at ==4913== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1DA7D1: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FF2D2: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E5E10: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2391C6: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230ABE: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Address 0x6401020 is 32 bytes inside a block of size 152 free'd ==4913== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1DCF74: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C2BC: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22A6F0: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230B85: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Block was alloc'd at ==4913== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1D5798: PyList_New (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C147: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22A6F0: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230B85: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x1F7B2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2594C9: PyParser_ASTFromString (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593B5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6250: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Address 0x6429020 is 352 bytes inside an unallocated block of size 432 in arena "client" ==4913== ==4913== Use of uninitialised value of size 8 ==4913== at 0x157C1C: PyObject_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x238989: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x238795: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230A9A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CEA8: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22D0D3: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22DB7F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x23061B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Address 0x6495020 is 16 bytes before a block of size 80 free'd ==4913== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1DCF74: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2348D9: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230A8F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF02: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Block was alloc'd at ==4913== at 0x4C2FA3F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x4C31D84: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1DBFAC: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1DBD9A: PySequence_List (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x23464F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230A8F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF02: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Use of uninitialised value of size 8 ==4913== at 0x157C1C: PyObject_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x238962: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x238795: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230C79: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Use of uninitialised value of size 8 ==4913== at 0x157C1C: PyObject_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x211FF5: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F45A7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6250: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x200C09: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1EAF17: _PyString_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x29E061: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2048DA: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2177E5: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2300DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22FCE9: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Address 0x8c71020 is 32 bytes before a block of size 1,048,624 in arena "client" ==4913== ==4913== Use of uninitialised value of size 8 ==4913== at 0x157C1C: PyObject_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1EB285: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x212017: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1EB16B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x212017: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F45A7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E5E10: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x200C09: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF02: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Address 0x8d28020 is 12,656 bytes inside a block of size 14,465 free'd ==4913== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1F49ED: PyMarshal_ReadLastObjectFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4930: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4548: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E5E10: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x200C09: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Block was alloc'd at ==4913== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1F49B8: PyMarshal_ReadLastObjectFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4930: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4548: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E5E10: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x200C09: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x222A55: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x223532: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x259489: PyParser_ASTFromString (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593B5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Address 0x20238020 is 1,088 bytes inside a block of size 1,559 free'd ==4913== at 0x4C31D2F: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1EAF17: _PyString_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x253CBD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x25303C: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x205FE4: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Block was alloc'd at ==4913== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1E1AB1: PyString_FromStringAndSize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x25309A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x25303C: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x205FE4: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1EAF17: _PyString_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x23461F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230C6E: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Address 0x20235020 is 3,936 bytes inside a block of size 4,097 free'd ==4913== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1E5FB2: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x200C09: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E5E10: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Block was alloc'd at ==4913== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1E5C57: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x200C09: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E5E10: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22DB6B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x23061B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Address 0x202ac020 is 3,840 bytes inside a block of size 4,097 free'd ==4913== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1E5FB2: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x200C09: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E5E10: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Block was alloc'd at ==4913== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x1E5C57: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x200C09: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E5E10: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== Use of uninitialised value of size 8 ==4913== at 0x157C1C: PyObject_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x238094: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x23CFB4: _PyModule_Clear (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x23C8AF: PyImport_Cleanup (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x239927: Py_Finalize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D5073: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== ==4913== Invalid read of size 4 ==4913== at 0x242A17: PyGrammar_RemoveAccelerators (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2399A0: Py_Finalize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1D5073: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x4E5DB96: (below main) (libc-start.c:310) ==4913== Address 0x6020020 is 2,064 bytes inside a block of size 2,632 free'd ==4913== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x6730FBF: PyArray_MatrixProduct2 (multiarraymodule.c:1033) ==4913== by 0x6735279: array_matrixproduct (multiarraymodule.c:2204) ==4913== by 0x1FE4C9: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2177E5: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2300DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== Block was alloc'd at ==4913== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==4913== by 0x66F16AD: PyArray_IterNew (iterators.c:182) ==4913== by 0x66F3E10: PyArray_IterAllButAxis (iterators.c:287) ==4913== by 0x6730AB3: PyArray_MatrixProduct2 (multiarraymodule.c:1011) ==4913== by 0x6735279: array_matrixproduct (multiarraymodule.c:2204) ==4913== by 0x1FE4C9: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== by 0x2177E5: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==4913== ==4913== ==4913== HEAP SUMMARY: ==4913== in use at exit: 5,604,523 bytes in 4,382 blocks ==4913== total heap usage: 87,946 allocs, 83,564 frees, 70,691,523 bytes allocated ==4913== ==4913== LEAK SUMMARY: ==4913== definitely lost: 48 bytes in 3 blocks ==4913== indirectly lost: 96 bytes in 3 blocks ==4913== possibly lost: 184,348 bytes in 111 blocks ==4913== still reachable: 5,420,031 bytes in 4,265 blocks ==4913== suppressed: 0 bytes in 0 blocks ==4913== Rerun with --leak-check=full to see details of leaked memory ==4913== ==4913== For counts of detected and suppressed errors, rerun with: -v ==4913== Use --track-origins=yes to see where uninitialised values come from ==4913== ERROR SUMMARY: 593 errors from 53 contexts (suppressed: 1903 from 88) ================================================================================ To pass this verification check the number of bytes that are "definitely lost" or "indirectly lost" must be zero. NOTE that Valgrind will typically report non-zero "possibly lost" bytes due to Python's internal memory allocation and garbage collection that it does not monitor. Full Valgrind output written to auxiliary file "valgrind.out" (Search for the word "lost" in the file to identify memory leaks.) Grade: F Comment: Memory leak detected.