!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !!!!! !!!!! !!!!! VERIFICATION CHECK: vc-memory-leak !!!!! !!!!! !!!!! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! Description: Check that the model has no memory leaks. This is tested using the Valgrind memory debugging tool (http://valgrind.org) by performing a series of energy and force calculations on a randomly distorted face-centered cubic (FCC) cube base structure for both non-periodic and periodic boundary conditions. Separate configurations are tested for each species supported by the model, as well as one containing a random distribution of all species. Configurations used for testing are provided as auxiliary files. Author: Ellad Tadmor ----------------------------------------------------------------------------------------------------- Results for KIM Model : Sim_LAMMPS_Vashishta_BroughtonMeliVashishta_1997_SiO__SM_422553794879_000 Supported species : O Si random seed = 13 lattice constant (orig) = 3.000 perturbation amplitude = 0.300 number unit cells per side = 2 ----------------------------------------------------------------------------------------------------- MONOATOMIC STRUCTURE (pbc=False)-- Species = O (Configuration in file "config-F-O.xyz") ----------------------------------------------------------------------------------------------------- Energy = 160.86033425 Forces: 1 -3.01925079e+00 -1.29858234e+01 -9.98302078e+00 2 -4.30632518e+00 3.48554991e+00 -7.87417367e+00 3 2.16981247e+00 -6.38032264e+00 -2.46711059e+00 4 -5.75705182e+00 9.44510141e+00 7.69846677e+00 5 3.26690095e+00 -1.10726706e+01 -3.75706709e+00 6 5.39965814e+00 5.44012739e-01 -6.57825866e+00 7 3.42015079e+00 -2.36065911e+01 -2.10668083e+01 8 -1.57028383e+01 -1.60525659e+01 1.52593654e+00 9 -9.73823557e+00 1.44469912e-01 -1.10378347e+01 10 -5.21047307e+00 1.43514509e+01 -1.41368222e+01 11 -5.10477082e+00 -8.88392902e+00 9.38204785e+00 12 -5.72489624e+00 7.04131345e+00 -2.02470100e+00 13 -3.43164950e+00 -2.54124326e+00 -3.07943217e+01 14 5.48096941e+00 5.60726238e+00 -3.99405869e+00 15 3.21772029e+01 6.08762760e+00 7.65056559e+00 16 4.59933876e+00 1.83691996e+01 9.76906262e+00 17 -1.03067545e+01 -5.57064766e+00 -6.73024475e-01 18 3.06113533e+00 6.48846808e+00 -2.50887233e+00 19 2.04210002e+00 -9.29304893e+00 6.80198941e+00 20 -5.91749679e+00 2.58316653e+00 6.09671473e+00 21 -6.85615708e+00 -7.29168199e+00 5.09665576e+00 22 1.51265947e+01 1.72625969e+01 1.94175860e+01 23 3.78465396e+00 -2.18921492e+00 4.63983604e+00 24 1.42310679e+00 9.91180770e-01 5.26870153e+00 25 -9.33087149e+00 -6.93562840e+00 -4.17429552e+00 26 -3.29396478e+00 1.32567398e+01 -5.23180612e+00 27 1.54099628e+01 -2.42539768e+01 1.18495726e+01 28 -2.39095497e+01 2.27209258e+01 6.53015130e+00 29 -3.80671306e+00 -6.26114101e+00 3.48582590e+00 30 6.70879248e+00 8.08817341e+00 3.04130503e+00 31 1.11306386e+01 -3.01829083e+00 7.48561265e+00 32 6.21598062e+00 9.86953720e+00 1.05621455e+01 MONOATOMIC STRUCTURE (pbc=False)-- Species = Si (Configuration in file "config-F-Si.xyz") ----------------------------------------------------------------------------------------------------- Energy = 218.000255106 Forces: 1 -4.71300638e+00 -4.19589727e+00 -3.61015188e+00 2 -1.44837175e+00 -2.79047472e+00 -8.03253344e+00 3 -1.16228843e+00 -7.54789923e+00 -1.23284847e+00 4 -8.28034042e+00 -2.39762561e+00 -1.23170936e+00 5 3.14923284e-01 -5.18210220e+00 -5.91206099e+00 6 5.78675764e+00 -5.46041585e-02 -4.62986929e+00 7 4.88995041e+00 -5.39254641e+00 3.77071014e-02 8 2.93635639e+00 -2.96705163e+00 -1.24739379e+00 9 -5.76417614e+00 1.39539294e+00 -6.10344556e+00 10 -2.57406318e+00 7.03068727e+00 -5.16680274e+00 11 -1.24214161e+00 3.05449196e+00 -2.10220923e+00 12 -6.38131667e+00 6.35861055e+00 -2.84505505e+00 13 2.83340597e+00 9.58956103e-02 -7.34576024e+00 14 4.77572122e+00 3.05381956e+00 -4.19364045e+00 15 7.23208516e+00 1.89479994e+00 -1.48554304e+00 16 1.97400743e+00 7.29581534e+00 3.10249764e-01 17 -6.28755639e+00 -5.28613128e+00 -1.06740239e+00 18 -1.89774376e+00 -2.51797957e+00 2.99084044e+00 19 1.14725952e+00 -6.20724460e+00 5.35445868e+00 20 -5.54752995e+00 6.29729353e-01 6.09593562e+00 21 2.45364992e+00 -6.37652917e+00 1.83950197e+00 22 6.95822723e+00 -1.75602730e+00 1.69399414e+00 23 3.22420956e+00 -2.68134468e+00 2.77480441e+00 24 2.05581932e+00 -1.55012457e+00 6.55499333e+00 25 -7.61505062e+00 -7.39211593e-02 2.27999929e+00 26 2.13385509e-01 7.96974963e+00 1.71634519e+00 27 -1.24999354e+00 1.52191919e+00 7.71167660e+00 28 -5.58222779e+00 3.53723059e+00 5.25132873e+00 29 3.09498642e+00 3.54352182e+00 2.45179706e+00 30 4.83116342e+00 4.30275897e+00 2.49696251e-01 31 4.69691854e+00 3.94638913e-01 4.24371636e+00 32 3.26979672e-01 4.89844193e+00 4.64938098e+00 MIXED STRUCTURE (pbc=False)-- Species = O Si (Configuration in file "config-F-OSi.xyz") ----------------------------------------------------------------------------------------------------- Energy = 34.6295177437 Forces: 1 -2.09957498e+00 -4.98853781e+00 -3.49952504e+00 2 1.13025465e+00 -2.43387059e+00 -6.50555377e+00 3 -2.83121552e+00 -1.01178136e+01 -1.27832652e+00 4 -2.17331308e+00 1.69635039e+00 4.29237985e-01 5 2.96558886e+00 -2.04906233e+00 -3.88607321e+00 6 3.15999051e+00 -9.78156599e+00 -5.25216151e+00 7 1.40350032e+01 -5.35938969e+00 -5.33703583e+00 8 -1.36467081e+01 1.03478621e+01 3.41295202e+00 9 -6.84598788e+00 2.13944004e+00 -3.81120098e+00 10 1.60670615e+00 2.02163184e+00 -2.07084019e+00 11 3.84371486e+00 -3.96588609e-02 -4.70951790e+00 12 -1.72816491e+00 3.40139028e+00 4.58606201e+00 13 -6.73186778e+00 3.46731380e+00 -6.60885586e+00 14 8.66278263e+00 7.09064413e+00 -7.06952029e+00 15 4.69305962e+00 -2.63048026e+00 8.42742617e-01 16 -1.40889775e+00 5.17867458e+00 3.54233209e+00 17 -2.56059553e+00 -1.21644495e+00 -7.91369098e-01 18 1.50700981e+00 -5.73848500e+00 5.19613975e+00 19 -5.15089757e-03 -2.41108164e+00 2.63059145e+00 20 -1.22141567e-01 5.33409150e-01 3.78335010e+00 21 -3.14860061e+00 -9.09215947e+00 6.67343544e+00 22 8.02986462e+00 -3.77636155e+00 -1.88247404e-01 23 1.19742547e-01 -8.99827431e-01 3.46134621e-01 24 7.94903068e-01 -5.36147847e+00 1.21315547e+01 25 -9.65299551e+00 -8.75168817e+00 -5.11627827e+00 26 3.44045197e+00 1.46135015e+01 1.95800133e-01 27 -5.70355205e+00 -6.35244195e-01 2.54920238e+00 28 -7.73082641e-01 7.30614859e+00 7.10064549e+00 29 -1.63665564e+00 5.87731147e+00 -6.30262729e+00 30 2.75523431e+00 5.63909926e+00 9.21652733e-01 31 5.69922289e+00 -4.10954710e-01 4.19556859e+00 32 -1.37502527e+00 6.38132758e+00 3.88973102e+00 ================================================================================ VALGRIND OUTPUT ================================================================================ ==53870== Memcheck, a memory error detector ==53870== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==53870== Using Valgrind-3.13.0 and LibVEX; rerun with -h for copyright info ==53870== Command: python runner2.py Sim_LAMMPS_Vashishta_BroughtonMeliVashishta_1997_SiO__SM_422553794879_000 ==53870== ==53870== Conditional jump or move depends on uninitialised value(s) ==53870== at 0x1FAC44: PyGrammar_AddAccelerators (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FA2EE: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== ==53870== Use of uninitialised value of size 8 ==53870== at 0x1FAC54: PyGrammar_AddAccelerators (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FA2EE: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x1FAC3A: PyGrammar_AddAccelerators (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FA2EE: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== Address 0x6021020 is 320 bytes inside a block of size 676 free'd ==53870== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1FAC6F: PyGrammar_AddAccelerators (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FA2EE: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== Block was alloc'd at ==53870== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1FAD7E: PyGrammar_AddAccelerators (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FA2EE: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== ==53870== Conditional jump or move depends on uninitialised value(s) ==53870== at 0x1F752D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== ==53870== Use of uninitialised value of size 8 ==53870== at 0x1F7545: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x2233EA: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x20A37D: PyNode_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F5B8B: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== Address 0x608d020 is 8,064 bytes inside a block of size 8,345 free'd ==53870== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x20ACE5: PyTokenizer_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F9701: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== Block was alloc'd at ==53870== at 0x4C31D2F: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1FD2F4: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F88E3: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x222E34: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x20A37D: PyNode_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F5B8B: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== Address 0x608d020 is 8,064 bytes inside a block of size 8,345 free'd ==53870== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x20ACE5: PyTokenizer_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F9701: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== Block was alloc'd at ==53870== at 0x4C31D2F: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1FD2F4: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F88E3: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x222A55: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x20A37D: PyNode_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F5B8B: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== Address 0x608d020 is 8,064 bytes inside a block of size 8,345 free'd ==53870== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x20ACE5: PyTokenizer_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F9701: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== Block was alloc'd at ==53870== at 0x4C31D2F: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1FD2F4: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F88E3: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F5B53: PyParser_ASTFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2272EB: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D0D3: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D185: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230709: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2309DA: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230842: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Address 0x60a1020 is 0 bytes inside a block of size 136 free'd ==53870== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1DCF74: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C2BC: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22A6F0: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224A51: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== Block was alloc'd at ==53870== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1D5798: PyList_New (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C147: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22A6F0: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224A51: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22FAB2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D0F5: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D15B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230709: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230976: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2308B8: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Address 0x60a3020 is 176 bytes inside a block of size 768 free'd ==53870== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x2389D4: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x238795: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230A9A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== Block was alloc'd at ==53870== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x15FB60: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D093: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D34F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x23A08A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D4C2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D1B9: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D185: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230709: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230E0D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2309DA: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D138: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D15B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230709: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2309DA: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2308B8: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Address 0x60a4020 is 256 bytes inside a block of size 768 free'd ==53870== at 0x4C31D2F: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22FAB2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D0F5: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D15B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230709: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230976: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2308B8: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Block was alloc'd at ==53870== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x15FB60: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22FAB2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D2AF: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x23061B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230890: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1EAF17: _PyString_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x235339: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230A8F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== Address 0x60aa020 is 0 bytes after a block of size 768 free'd ==53870== at 0x4C31D2F: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22FAB2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D19F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230709: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2309B6: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230E2B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2309DA: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2308B8: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Block was alloc'd at ==53870== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x15FB60: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D138: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D15B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D2AF: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D29B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x23061B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230976: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230E2B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2309DA: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2308B8: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1EAF17: _PyString_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x23461F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230A8F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== Address 0x60aa020 is 0 bytes after a block of size 768 free'd ==53870== at 0x4C31D2F: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22FAB2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D19F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230709: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2309B6: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230E2B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2309DA: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2308B8: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Block was alloc'd at ==53870== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x15FB60: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D138: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D15B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D2AF: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D29B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x23061B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230976: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230E2B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2309DA: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2308B8: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2391C6: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x231957: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== Address 0x60a1020 is 0 bytes inside a block of size 136 free'd ==53870== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1DCF74: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C2BC: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22A6F0: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224A51: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== Block was alloc'd at ==53870== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1D5798: PyList_New (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C147: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22A6F0: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224A51: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x227321: PyRun_FileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22667C: PyRun_SimpleFileExFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D51AA: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x240C2F: _PyObject_GC_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FD943: PyFrame_New (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x20316A: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203231: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203231: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Address 0x618e020 is 16 bytes before a block of size 744 alloc'd ==53870== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x156CE8: _PyObject_GC_Malloc (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FD98D: PyFrame_New (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x20316A: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203231: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Conditional jump or move depends on uninitialised value(s) ==53870== at 0x15FB13: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x240C2F: _PyObject_GC_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FD943: PyFrame_New (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x20316A: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203231: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203231: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Use of uninitialised value of size 8 ==53870== at 0x15FB20: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x240C2F: _PyObject_GC_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FD943: PyFrame_New (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x20316A: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203231: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203231: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Syscall param sched_getaffinity(mask) points to unaddressable byte(s) ==53870== at 0x4F3FF2F: sched_getaffinity@@GLIBC_2.3.4 (sched_getaffinity.c:36) ==53870== by 0x6EECB2B: get_num_procs (in /usr/local/lib/python2.7/dist-packages/numpy/.libs/libopenblasp-r0-382c8f3a.3.5.dev.so) ==53870== by 0x6EECC1C: blas_get_cpu_number (in /usr/local/lib/python2.7/dist-packages/numpy/.libs/libopenblasp-r0-382c8f3a.3.5.dev.so) ==53870== by 0x6CC3077: gotoblas_init (in /usr/local/lib/python2.7/dist-packages/numpy/.libs/libopenblasp-r0-382c8f3a.3.5.dev.so) ==53870== by 0x4010732: call_init (dl-init.c:72) ==53870== by 0x4010732: _dl_init (dl-init.c:119) ==53870== by 0x40151FE: dl_open_worker (dl-open.c:522) ==53870== by 0x4FA32DE: _dl_catch_exception (dl-error-skeleton.c:196) ==53870== by 0x40147C9: _dl_open (dl-open.c:605) ==53870== by 0x544CF95: dlopen_doit (dlopen.c:66) ==53870== by 0x4FA32DE: _dl_catch_exception (dl-error-skeleton.c:196) ==53870== by 0x4FA336E: _dl_catch_error (dl-error-skeleton.c:215) ==53870== by 0x544D734: _dlerror_run (dlerror.c:162) ==53870== Address 0x0 is not stack'd, malloc'd or (recently) free'd ==53870== ==53870== Invalid read of size 4 ==53870== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1EAF17: _PyString_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x253CBD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x25303C: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x205FE4: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Address 0x6416020 is 0 bytes inside a block of size 32 free'd ==53870== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x227ED7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x275F4B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x26A00F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203595: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Block was alloc'd at ==53870== at 0x4C2FA3F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x4C31D84: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1D6C0F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D68B4: PyList_Append (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x26A77D: Py_ReprEnter (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x275C9E: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x26A00F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203595: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1EAF17: _PyString_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2544D2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x25303C: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x205FE4: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Address 0x6416020 is 0 bytes inside a block of size 32 free'd ==53870== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x227ED7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x275F4B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x26A00F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203595: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Block was alloc'd at ==53870== at 0x4C2FA3F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x4C31D84: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1D6C0F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D68B4: PyList_Append (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x26A77D: Py_ReprEnter (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x275C9E: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x26A00F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203595: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2533D4: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x25303C: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x205FE4: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E9EC2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Address 0x6417020 is 768 bytes inside a block of size 1,685 free'd ==53870== at 0x4C31D2F: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1EAF17: _PyString_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2544D2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x25303C: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x205FE4: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Block was alloc'd at ==53870== at 0x4C31D2F: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1EAF17: _PyString_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x253CBD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x25303C: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x205FE4: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Conditional jump or move depends on uninitialised value(s) ==53870== at 0x1F752D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2594C9: PyParser_ASTFromString (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593B5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E9EC2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Use of uninitialised value of size 8 ==53870== at 0x1F7545: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2594C9: PyParser_ASTFromString (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593B5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E9EC2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x222E34: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x259489: PyParser_ASTFromString (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593B5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E9EC2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Address 0x6424020 is 34,064 bytes inside a block of size 36,032 free'd ==53870== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1F96DB: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2594C9: PyParser_ASTFromString (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593B5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Block was alloc'd at ==53870== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1F69EA: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2594C9: PyParser_ASTFromString (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593B5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22DBD2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x23061B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Address 0x642d020 is 128 bytes inside a block of size 308 free'd ==53870== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x23662A: PyCode_Optimize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x234862: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230A8F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF02: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Block was alloc'd at ==53870== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x2362FD: PyCode_Optimize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x234862: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230A8F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF02: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2391DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230ABE: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Address 0x20dbd020 is 16 bytes inside a block of size 100 free'd ==53870== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x23662A: PyCode_Optimize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x234862: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230A8F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE86: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Block was alloc'd at ==53870== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x2362FD: PyCode_Optimize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x234862: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230A8F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE86: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230648: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Address 0x20dbf020 is 96 bytes inside a block of size 296 free'd ==53870== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x23663A: PyCode_Optimize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x234862: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230A8F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF02: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Block was alloc'd at ==53870== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x236313: PyCode_Optimize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x234862: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230A8F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF02: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1EA774: PyString_FromFormatV (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x24DC28: PyString_FromFormat (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x6893800: ufunc_get_doc (ufunc_object.c:5860) ==53870== by 0x2133A8: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x15B161: _PyObject_GenericGetAttrWithDict (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FE5CF: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x217618: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2300DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Address 0x219d1020 is 1,440 bytes inside a block of size 4,097 free'd ==53870== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1E5F0D: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E74AD: PyObject_CallFunction (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E5962: PyImport_Import (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E587C: PyImport_ImportModule (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x689382B: npy_cache_import (npy_import.h:23) ==53870== by 0x689382B: ufunc_get_doc (ufunc_object.c:5840) ==53870== by 0x2133A8: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x15B161: _PyObject_GenericGetAttrWithDict (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FE5CF: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Block was alloc'd at ==53870== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1E5C57: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E74AD: PyObject_CallFunction (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E5962: PyImport_Import (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E587C: PyImport_ImportModule (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x689382B: npy_cache_import (npy_import.h:23) ==53870== by 0x689382B: ufunc_get_doc (ufunc_object.c:5840) ==53870== by 0x2133A8: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x15B161: _PyObject_GenericGetAttrWithDict (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FE5CF: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1EAF17: _PyString_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2497A1: PyString_Format (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FFCC2: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x217618: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2300DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22FCE9: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1EC86A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x20341F: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Address 0x21a3a020 is 16 bytes after a block of size 768 alloc'd ==53870== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1DA7D1: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1DB03B: PyDict_SetItemString (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D9572: PyType_Ready (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1ECDBC: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1EC794: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1EFDD1: PyObject_CallFunctionObjArgs (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2016F1: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Conditional jump or move depends on uninitialised value(s) ==53870== at 0x1F7B3A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2594C9: PyParser_ASTFromString (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593B5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E9EC2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Use of uninitialised value of size 8 ==53870== at 0x163E24: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2594C9: PyParser_ASTFromString (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593B5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E9EC2: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Conditional jump or move depends on uninitialised value(s) ==53870== at 0x15FB13: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2391DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230ABE: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Use of uninitialised value of size 8 ==53870== at 0x15FB20: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2391DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230ABE: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Use of uninitialised value of size 8 ==53870== at 0x157C1C: PyObject_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x212203: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F45A7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6250: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x200C09: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Use of uninitialised value of size 8 ==53870== at 0x157C1C: PyObject_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x281C0E: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FE4C9: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x217618: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2300DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22FCE9: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1EC86A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x20341F: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x23D805: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FC3FA: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x217618: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2300DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22FCE9: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1EC86A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x20341F: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Address 0x21ce7020 is 3,792 bytes inside a block of size 5,037 free'd ==53870== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1EB16B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x20344C: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x217618: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2300DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22FCE9: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1EC86A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x20341F: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Block was alloc'd at ==53870== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1E1AB1: PyString_FromStringAndSize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x28249F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FE4C9: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x217618: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2300DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22FCE9: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1EC86A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x20341F: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Use of uninitialised value of size 8 ==53870== at 0x157C1C: PyObject_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x211FF5: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1EB16B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x212017: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F45A7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6250: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x200C09: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Use of uninitialised value of size 8 ==53870== at 0x157C1C: PyObject_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x212203: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1EB16B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x212017: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F45A7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E5E10: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x200C09: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x1F7521: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2594C9: PyParser_ASTFromString (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593B5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6250: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Address 0x63c9020 is 752 bytes inside a block of size 768 free'd ==53870== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1DA9C7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FF2D2: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E5E10: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Block was alloc'd at ==53870== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1DA7D1: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FF2D2: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E5E10: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2391C6: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230ABE: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Address 0x6401020 is 32 bytes inside a block of size 152 free'd ==53870== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1DCF74: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C2BC: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22A6F0: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230B85: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Block was alloc'd at ==53870== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1D5798: PyList_New (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C147: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22A6F0: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230B85: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x1F7B2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2594C9: PyParser_ASTFromString (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593B5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6250: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Address 0x6429020 is 352 bytes inside an unallocated block of size 432 in arena "client" ==53870== ==53870== Use of uninitialised value of size 8 ==53870== at 0x157C1C: PyObject_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x238989: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x238795: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230A9A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CEA8: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22D0D3: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22DB7F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x23061B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Address 0x6495020 is 16 bytes before a block of size 80 free'd ==53870== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1DCF74: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2348D9: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230A8F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF02: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Block was alloc'd at ==53870== at 0x4C2FA3F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x4C31D84: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1DBFAC: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1DBD9A: PySequence_List (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x23464F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230A8F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF02: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Use of uninitialised value of size 8 ==53870== at 0x157C1C: PyObject_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x238962: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x238795: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230C79: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Use of uninitialised value of size 8 ==53870== at 0x157C1C: PyObject_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x211FF5: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F45A7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6250: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x200C09: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1EAF17: _PyString_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x29E061: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2048DA: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2177E5: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2300DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22FCE9: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Address 0x8c71020 is 32 bytes before a block of size 1,048,624 in arena "client" ==53870== ==53870== Use of uninitialised value of size 8 ==53870== at 0x157C1C: PyObject_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1EB285: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x212017: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1EB16B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x212017: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F45A7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E5E10: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x200C09: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF02: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Address 0x8d28020 is 12,656 bytes inside a block of size 14,465 free'd ==53870== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1F49ED: PyMarshal_ReadLastObjectFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4930: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4548: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E5E10: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x200C09: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Block was alloc'd at ==53870== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1F49B8: PyMarshal_ReadLastObjectFromFile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4930: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4548: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E5E10: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x200C09: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x222A55: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x223532: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x259489: PyParser_ASTFromString (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593B5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Address 0x20238020 is 1,088 bytes inside a block of size 1,559 free'd ==53870== at 0x4C31D2F: realloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1EAF17: _PyString_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x253CBD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x25303C: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x205FE4: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Block was alloc'd at ==53870== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1E1AB1: PyString_FromStringAndSize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x25309A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x25303C: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x205FE4: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1EAF17: _PyString_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x23461F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230C6E: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Address 0x20235020 is 3,936 bytes inside a block of size 4,097 free'd ==53870== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1E5FB2: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x200C09: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E5E10: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Block was alloc'd at ==53870== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1E5C57: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x200C09: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E5E10: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x15FB0A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22F589: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22DB6B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x23061B: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CF1D: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x230C2F: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22CE42: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x224B92: PyAST_Compile (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22C604: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2593D5: PyRun_StringFlags (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x206A94: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Address 0x202ac020 is 3,840 bytes inside a block of size 4,097 free'd ==53870== at 0x4C30D3B: free (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1E5FB2: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x200C09: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E5E10: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== Block was alloc'd at ==53870== at 0x4C2FB0F: malloc (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==53870== by 0x1E5C57: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E79E7: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2077FF: PyEval_CallObjectWithKeywords (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x200C09: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB628: PyEval_EvalCode (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FB564: PyImport_ExecCodeModuleEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1F4592: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E6A56: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E5E10: PyImport_ImportModuleLevel (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Use of uninitialised value of size 8 ==53870== at 0x157C1C: PyObject_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x6752763: NpyIter_Deallocate (nditer_constr.c:711) ==53870== by 0x68967C6: iterator_loop (ufunc_object.c:1586) ==53870== by 0x68981B3: execute_legacy_ufunc_loop (ufunc_object.c:1742) ==53870== by 0x689AA7D: PyUFunc_GenericFunction (ufunc_object.c:3260) ==53870== by 0x689BA3D: ufunc_generic_call (ufunc_object.c:4686) ==53870== by 0x689C185: ufunc_outer (ufunc_object.c:5403) ==53870== by 0x1FE4C9: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2178BB: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x200A20: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Use of uninitialised value of size 8 ==53870== at 0x157C1C: PyObject_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x6752763: NpyIter_Deallocate (nditer_constr.c:711) ==53870== by 0x67323F1: PyArray_Where (multiarraymodule.c:3044) ==53870== by 0x6732FA6: array_where (multiarraymodule.c:3069) ==53870== by 0x1FE4C9: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2035FD: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Conditional jump or move depends on uninitialised value(s) ==53870== at 0x15FB13: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1EAF17: _PyString_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x29E061: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2048DA: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2177E5: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2300DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22FCE9: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Use of uninitialised value of size 8 ==53870== at 0x15FB20: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1EAF17: _PyString_Resize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x29E061: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2048DA: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2177E5: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2300DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22FCE9: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Use of uninitialised value of size 8 ==53870== at 0x157C1C: PyObject_Free (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203501: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x203C37: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2177E5: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2300DD: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x22FCE9: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1EC86A: ??? (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1E777D: PyObject_Call (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x200A20: PyEval_EvalFrameEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1FBD09: PyEval_EvalCodeEx (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== ==53870== Invalid read of size 4 ==53870== at 0x242A17: PyGrammar_RemoveAccelerators (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x2399A0: Py_Finalize (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x1D5073: Py_Main (in /disk2/worker/openkim-pipeline/venv/bin/python2) ==53870== by 0x4E5DB96: (below main) (libc-start.c:310) ==53870== Address 0x6020020 is 7,472 bytes inside an unallocated block of size 8,944 in arena "client" ==53870== ==53870== ==53870== HEAP SUMMARY: ==53870== in use at exit: 4,673,548 bytes in 3,934 blocks ==53870== total heap usage: 162,861 allocs, 158,927 frees, 558,540,251 bytes allocated ==53870== ==53870== LEAK SUMMARY: ==53870== definitely lost: 960 bytes in 10 blocks ==53870== indirectly lost: 0 bytes in 0 blocks ==53870== possibly lost: 189,156 bytes in 120 blocks ==53870== still reachable: 4,483,432 bytes in 3,804 blocks ==53870== suppressed: 0 bytes in 0 blocks ==53870== Rerun with --leak-check=full to see details of leaked memory ==53870== ==53870== For counts of detected and suppressed errors, rerun with: -v ==53870== Use --track-origins=yes to see where uninitialised values come from ==53870== ERROR SUMMARY: 644 errors from 57 contexts (suppressed: 1980 from 95) ================================================================================ To pass this verification check the number of bytes that are "definitely lost" or "indirectly lost" must be zero. NOTE that Valgrind will typically report non-zero "possibly lost" bytes due to Python's internal memory allocation and garbage collection that it does not monitor. Full Valgrind output written to auxiliary file "valgrind.out" (Search for the word "lost" in the file to identify memory leaks.) Grade: F Comment: Memory leak detected.