!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !!!!! !!!!! !!!!! VERIFICATION CHECK: vc-memory-leak !!!!! !!!!! !!!!! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! Description: Check that the model has no memory leaks. This is tested using the Valgrind memory debugging tool (http://valgrind.org) by performing a series of energy and force calculations on a randomly distorted face-centered cubic (FCC) cube base structure for both non-periodic and periodic boundary conditions. Separate configurations are tested for each species supported by the model, as well as one containing a random distribution of all species. Configurations used for testing are provided as auxiliary files. Author: Ellad Tadmor and Daniel S. Karls ----------------------------------------------------------------------------------------------------- Results for KIM Model : MEAM_LAMMPS_VellaChenStillinger_2017_Sn__MO_316045643888_001 Supported species : Sn random seed = 13 lattice constant (orig) = 3.000 perturbation amplitude = 0.300 number unit cells per side = 2 ----------------------------------------------------------------------------------------------------- MONOATOMIC STRUCTURE (pbc=False)-- Species = Sn (Configuration in file "config-F-Sn.xyz") ----------------------------------------------------------------------------------------------------- Energy = 1113.7315161084762 Forces: 1 -2.07388768e+01 -6.32145565e+01 -4.42474347e+01 2 1.33679905e+01 3.24518174e+01 -6.53515841e+01 3 4.12745514e+00 -7.44921342e+01 -1.47507190e+01 4 -6.49643323e+01 6.05497423e+01 2.47119781e+01 5 5.13478663e+00 -5.93925383e+01 -1.72513952e+01 6 4.03406583e+01 -3.19354675e-01 -3.47103278e+01 7 2.73747779e+01 -8.48267883e+01 -5.19218147e+01 8 -1.19769791e+02 1.62625685e+02 -3.16488196e+01 9 -6.03510857e+01 -5.47099629e+01 -8.58981724e+01 10 3.63385833e+01 1.05704530e+02 -6.91101740e+01 11 -6.10903767e+00 -1.09099314e+02 1.51806053e+01 12 -9.93388048e+01 7.38646934e+01 4.26049852e+01 13 2.08953273e-01 -4.75774202e+01 -1.25087833e+02 14 6.27127345e+01 4.52076447e+01 -5.78072380e+01 15 1.30321565e+02 -5.94885994e+01 2.83339227e+01 16 -8.41159266e+01 1.29843668e+02 2.31829946e+01 17 -8.05345141e+01 -5.32529974e+01 -3.10479546e+01 18 2.41361563e+01 6.46172050e+01 -4.95924878e+01 19 2.99581822e+01 -7.76420959e+01 6.65563635e+01 20 -5.85427623e+01 4.15883780e+01 6.36417260e+01 21 -4.75406268e+01 -1.77384127e+02 6.60555913e+01 22 2.02606454e+02 6.79657216e+01 3.95989757e+01 23 3.07744531e+01 -1.66791278e+01 3.95222834e+01 24 1.72914849e+01 2.46090772e+01 5.66973713e+01 25 -5.43834500e+01 -3.51154197e+01 -3.51704270e+01 26 3.12612527e+01 9.23961720e+01 -4.37804557e+01 27 1.95942897e+01 -7.77508028e+01 6.97708217e+01 28 -1.20444540e+02 7.81781941e+01 8.02762367e+01 29 -1.59565969e+01 -6.85377622e+01 -6.41582126e+00 30 9.14681894e+01 6.09128006e+01 -3.93579724e+00 31 4.52056588e+01 -2.82786418e+01 5.33643704e+01 32 2.05667196e+01 4.72463146e+01 9.82302303e+01 MONOATOMIC STRUCTURE (pbc=True)-- Species = Sn (Configuration in file "config-T-Sn.xyz") ----------------------------------------------------------------------------------------------------- Energy = 1113.7315161084762 Forces: 1 -2.07388768e+01 -6.32145565e+01 -4.42474347e+01 2 1.33679905e+01 3.24518174e+01 -6.53515841e+01 3 4.12745514e+00 -7.44921342e+01 -1.47507190e+01 4 -6.49643323e+01 6.05497423e+01 2.47119781e+01 5 5.13478663e+00 -5.93925383e+01 -1.72513952e+01 6 4.03406583e+01 -3.19354675e-01 -3.47103278e+01 7 2.73747779e+01 -8.48267883e+01 -5.19218147e+01 8 -1.19769791e+02 1.62625685e+02 -3.16488196e+01 9 -6.03510857e+01 -5.47099629e+01 -8.58981724e+01 10 3.63385833e+01 1.05704530e+02 -6.91101740e+01 11 -6.10903767e+00 -1.09099314e+02 1.51806053e+01 12 -9.93388048e+01 7.38646934e+01 4.26049852e+01 13 2.08953273e-01 -4.75774202e+01 -1.25087833e+02 14 6.27127345e+01 4.52076447e+01 -5.78072380e+01 15 1.30321565e+02 -5.94885994e+01 2.83339227e+01 16 -8.41159266e+01 1.29843668e+02 2.31829946e+01 17 -8.05345141e+01 -5.32529974e+01 -3.10479546e+01 18 2.41361563e+01 6.46172050e+01 -4.95924878e+01 19 2.99581822e+01 -7.76420959e+01 6.65563635e+01 20 -5.85427623e+01 4.15883780e+01 6.36417260e+01 21 -4.75406268e+01 -1.77384127e+02 6.60555913e+01 22 2.02606454e+02 6.79657216e+01 3.95989757e+01 23 3.07744531e+01 -1.66791278e+01 3.95222834e+01 24 1.72914849e+01 2.46090772e+01 5.66973713e+01 25 -5.43834500e+01 -3.51154197e+01 -3.51704270e+01 26 3.12612527e+01 9.23961720e+01 -4.37804557e+01 27 1.95942897e+01 -7.77508028e+01 6.97708217e+01 28 -1.20444540e+02 7.81781941e+01 8.02762367e+01 29 -1.59565969e+01 -6.85377622e+01 -6.41582126e+00 30 9.14681894e+01 6.09128006e+01 -3.93579724e+00 31 4.52056588e+01 -2.82786418e+01 5.33643704e+01 32 2.05667196e+01 4.72463146e+01 9.82302303e+01 ================================================================================ VALGRIND OUTPUT ================================================================================ ==35186== Memcheck, a memory error detector ==35186== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==35186== Using Valgrind-3.15.0 and LibVEX; rerun with -h for copyright info ==35186== Command: python runner2.py MEAM_LAMMPS_VellaChenStillinger_2017_Sn__MO_316045643888_001 ==35186== ==37860== Warning: invalid file descriptor 255988 in syscall close() ==37860== Warning: invalid file descriptor 255989 in syscall close() ==37860== Warning: invalid file descriptor 255990 in syscall close() ==37860== Warning: invalid file descriptor 255991 in syscall close() ==37860== Use --log-fd= to select an alternative log fd. ==37860== Warning: invalid file descriptor 255992 in syscall close() ==37860== Warning: invalid file descriptor 255993 in syscall close() ==35186== Mismatched free() / delete / delete [] ==35186== at 0x483CFBF: operator delete(void*) (in /usr/lib/x86_64-linux-gnu/valgrind/vgpreload_memcheck-amd64-linux.so) ==35186== by 0x119C7539C: MEAMC::ProcessLibraryFile(_IO_FILE*, int, std::vector, std::allocator >, std::allocator, std::allocator > > > const&) (in /work2/08773/bwaters/stampede2/bwaters/job-d9dd6b62-3a45-4052-b39b-418a9703dfee-007-bc7401c1-4d8d-4434-a026-dd3939083832/VC_561022993723_003-and-MO_316045643888_001-1657580036/staged_job_files/repository/md/MEAM_LAMMPS__MD_249792265679_001/libkim-api-model-driver.so) ==35186== by 0x119B4854D: MEAMImplementation::ProcessParameterFiles(KIM::ModelDriverCreate*, int, _IO_FILE* const*) (in /work2/08773/bwaters/stampede2/bwaters/job-d9dd6b62-3a45-4052-b39b-418a9703dfee-007-bc7401c1-4d8d-4434-a026-dd3939083832/VC_561022993723_003-and-MO_316045643888_001-1657580036/staged_job_files/repository/md/MEAM_LAMMPS__MD_249792265679_001/libkim-api-model-driver.so) ==35186== by 0x119B49C83: MEAMImplementation::MEAMImplementation(KIM::ModelDriverCreate*, KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, int*) (in /work2/08773/bwaters/stampede2/bwaters/job-d9dd6b62-3a45-4052-b39b-418a9703dfee-007-bc7401c1-4d8d-4434-a026-dd3939083832/VC_561022993723_003-and-MO_316045643888_001-1657580036/staged_job_files/repository/md/MEAM_LAMMPS__MD_249792265679_001/libkim-api-model-driver.so) ==35186== by 0x119B32DE7: MEAM::MEAM(KIM::ModelDriverCreate*, KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, int*) (in /work2/08773/bwaters/stampede2/bwaters/job-d9dd6b62-3a45-4052-b39b-418a9703dfee-007-bc7401c1-4d8d-4434-a026-dd3939083832/VC_561022993723_003-and-MO_316045643888_001-1657580036/staged_job_files/repository/md/MEAM_LAMMPS__MD_249792265679_001/libkim-api-model-driver.so) ==35186== by 0x119B365CE: ModelDriverCreateRoutine (in /work2/08773/bwaters/stampede2/bwaters/job-d9dd6b62-3a45-4052-b39b-418a9703dfee-007-bc7401c1-4d8d-4434-a026-dd3939083832/VC_561022993723_003-and-MO_316045643888_001-1657580036/staged_job_files/repository/md/MEAM_LAMMPS__MD_249792265679_001/libkim-api-model-driver.so) ==35186== by 0x33E65F1E: KIM::ModelImplementation::InitializeParameterizedModel(KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, KIM::Collections*) (in /usr/local/lib/libkim-api.so.2.2.1) ==35186== by 0x33E66E18: KIM::ModelImplementation::ModelCreate(KIM::Numbering, KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, std::__cxx11::basic_string, std::allocator > const&) (in /usr/local/lib/libkim-api.so.2.2.1) ==35186== by 0x33E6B762: KIM::ModelImplementation::Create(KIM::Numbering, KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, std::__cxx11::basic_string, std::allocator > const&, int*, KIM::ModelImplementation**) (in /usr/local/lib/libkim-api.so.2.2.1) ==35186== by 0x33E1B246: KIM::Model::Create(KIM::Numbering, KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, std::__cxx11::basic_string, std::allocator > const&, int*, KIM::Model**) (in /usr/local/lib/libkim-api.so.2.2.1) ==35186== by 0x22BFC4C7: void pybind11::cpp_function::initialize, std::allocator > const&)#21}, pybind11::tuple, KIM::Numbering const&, KIM::LengthUnit const&, KIM::EnergyUnit const&, KIM::ChargeUnit const&, KIM::TemperatureUnit const&, KIM::TimeUnit const&, std::__cxx11::basic_string, std::allocator > const&, pybind11::name, pybind11::scope, pybind11::sibling, char [115], pybind11::arg, char [115], char [115], char [115], char [115], char [115], char [115]>(pybind11_init_model(pybind11::module_&)::{lambda(KIM::Numbering const&, KIM::LengthUnit const&, KIM::EnergyUnit const&, KIM::ChargeUnit const&, KIM::TemperatureUnit const&, KIM::TimeUnit const&, std::__cxx11::basic_string, std::allocator > const&)#21}&&, pybind11::tuple (*)(KIM::Numbering const&, KIM::LengthUnit const&, KIM::EnergyUnit const&, KIM::ChargeUnit const&, KIM::TemperatureUnit const&, KIM::TimeUnit const&, std::__cxx11::basic_string, std::allocator > const&), pybind11::name const&, pybind11::scope const&, pybind11::sibling const&, char const (&) [115], pybind11::arg const&, char const (&) [115], char const (&) [115], char const (&) [115], char const (&) [115], char const (&) [115], char const (&) [115])::{lambda(pybind11::detail::function_call&)#3}::_FUN(pybind11::detail::function_call) (KIM_Model_bind.cpp:400) ==35186== by 0x22C102E3: pybind11::cpp_function::dispatcher(_object*, _object*, _object*) (pybind11.h:792) ==35186== Address 0x3edab280 is 0 bytes inside a block of size 1,024 alloc'd ==35186== at 0x483C583: operator new[](unsigned long) (in /usr/lib/x86_64-linux-gnu/valgrind/vgpreload_memcheck-amd64-linux.so) ==35186== by 0x119C74B21: MEAMC::ProcessLibraryFile(_IO_FILE*, int, std::vector, std::allocator >, std::allocator, std::allocator > > > const&) (in /work2/08773/bwaters/stampede2/bwaters/job-d9dd6b62-3a45-4052-b39b-418a9703dfee-007-bc7401c1-4d8d-4434-a026-dd3939083832/VC_561022993723_003-and-MO_316045643888_001-1657580036/staged_job_files/repository/md/MEAM_LAMMPS__MD_249792265679_001/libkim-api-model-driver.so) ==35186== by 0x119B4854D: MEAMImplementation::ProcessParameterFiles(KIM::ModelDriverCreate*, int, _IO_FILE* const*) (in /work2/08773/bwaters/stampede2/bwaters/job-d9dd6b62-3a45-4052-b39b-418a9703dfee-007-bc7401c1-4d8d-4434-a026-dd3939083832/VC_561022993723_003-and-MO_316045643888_001-1657580036/staged_job_files/repository/md/MEAM_LAMMPS__MD_249792265679_001/libkim-api-model-driver.so) ==35186== by 0x119B49C83: MEAMImplementation::MEAMImplementation(KIM::ModelDriverCreate*, KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, int*) (in /work2/08773/bwaters/stampede2/bwaters/job-d9dd6b62-3a45-4052-b39b-418a9703dfee-007-bc7401c1-4d8d-4434-a026-dd3939083832/VC_561022993723_003-and-MO_316045643888_001-1657580036/staged_job_files/repository/md/MEAM_LAMMPS__MD_249792265679_001/libkim-api-model-driver.so) ==35186== by 0x119B32DE7: MEAM::MEAM(KIM::ModelDriverCreate*, KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, int*) (in /work2/08773/bwaters/stampede2/bwaters/job-d9dd6b62-3a45-4052-b39b-418a9703dfee-007-bc7401c1-4d8d-4434-a026-dd3939083832/VC_561022993723_003-and-MO_316045643888_001-1657580036/staged_job_files/repository/md/MEAM_LAMMPS__MD_249792265679_001/libkim-api-model-driver.so) ==35186== by 0x119B365CE: ModelDriverCreateRoutine (in /work2/08773/bwaters/stampede2/bwaters/job-d9dd6b62-3a45-4052-b39b-418a9703dfee-007-bc7401c1-4d8d-4434-a026-dd3939083832/VC_561022993723_003-and-MO_316045643888_001-1657580036/staged_job_files/repository/md/MEAM_LAMMPS__MD_249792265679_001/libkim-api-model-driver.so) ==35186== by 0x33E65F1E: KIM::ModelImplementation::InitializeParameterizedModel(KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, KIM::Collections*) (in /usr/local/lib/libkim-api.so.2.2.1) ==35186== by 0x33E66E18: KIM::ModelImplementation::ModelCreate(KIM::Numbering, KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, std::__cxx11::basic_string, std::allocator > const&) (in /usr/local/lib/libkim-api.so.2.2.1) ==35186== by 0x33E6B762: KIM::ModelImplementation::Create(KIM::Numbering, KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, std::__cxx11::basic_string, std::allocator > const&, int*, KIM::ModelImplementation**) (in /usr/local/lib/libkim-api.so.2.2.1) ==35186== by 0x33E1B246: KIM::Model::Create(KIM::Numbering, KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, std::__cxx11::basic_string, std::allocator > const&, int*, KIM::Model**) (in /usr/local/lib/libkim-api.so.2.2.1) ==35186== by 0x22BFC4C7: void pybind11::cpp_function::initialize, std::allocator > const&)#21}, pybind11::tuple, KIM::Numbering const&, KIM::LengthUnit const&, KIM::EnergyUnit const&, KIM::ChargeUnit const&, KIM::TemperatureUnit const&, KIM::TimeUnit const&, std::__cxx11::basic_string, std::allocator > const&, pybind11::name, pybind11::scope, pybind11::sibling, char [115], pybind11::arg, char [115], char [115], char [115], char [115], char [115], char [115]>(pybind11_init_model(pybind11::module_&)::{lambda(KIM::Numbering const&, KIM::LengthUnit const&, KIM::EnergyUnit const&, KIM::ChargeUnit const&, KIM::TemperatureUnit const&, KIM::TimeUnit const&, std::__cxx11::basic_string, std::allocator > const&)#21}&&, pybind11::tuple (*)(KIM::Numbering const&, KIM::LengthUnit const&, KIM::EnergyUnit const&, KIM::ChargeUnit const&, KIM::TemperatureUnit const&, KIM::TimeUnit const&, std::__cxx11::basic_string, std::allocator > const&), pybind11::name const&, pybind11::scope const&, pybind11::sibling const&, char const (&) [115], pybind11::arg const&, char const (&) [115], char const (&) [115], char const (&) [115], char const (&) [115], char const (&) [115], char const (&) [115])::{lambda(pybind11::detail::function_call&)#3}::_FUN(pybind11::detail::function_call) (KIM_Model_bind.cpp:400) ==35186== by 0x22C102E3: pybind11::cpp_function::dispatcher(_object*, _object*, _object*) (pybind11.h:792) ==35186== ==35186== Mismatched free() / delete / delete [] ==35186== at 0x483CFBF: operator delete(void*) (in /usr/lib/x86_64-linux-gnu/valgrind/vgpreload_memcheck-amd64-linux.so) ==35186== by 0x119C6FDCD: MEAMC::ProcessParameterFile(_IO_FILE*, int) (in /work2/08773/bwaters/stampede2/bwaters/job-d9dd6b62-3a45-4052-b39b-418a9703dfee-007-bc7401c1-4d8d-4434-a026-dd3939083832/VC_561022993723_003-and-MO_316045643888_001-1657580036/staged_job_files/repository/md/MEAM_LAMMPS__MD_249792265679_001/libkim-api-model-driver.so) ==35186== by 0x119B48578: MEAMImplementation::ProcessParameterFiles(KIM::ModelDriverCreate*, int, _IO_FILE* const*) (in /work2/08773/bwaters/stampede2/bwaters/job-d9dd6b62-3a45-4052-b39b-418a9703dfee-007-bc7401c1-4d8d-4434-a026-dd3939083832/VC_561022993723_003-and-MO_316045643888_001-1657580036/staged_job_files/repository/md/MEAM_LAMMPS__MD_249792265679_001/libkim-api-model-driver.so) ==35186== by 0x119B49C83: MEAMImplementation::MEAMImplementation(KIM::ModelDriverCreate*, KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, int*) (in /work2/08773/bwaters/stampede2/bwaters/job-d9dd6b62-3a45-4052-b39b-418a9703dfee-007-bc7401c1-4d8d-4434-a026-dd3939083832/VC_561022993723_003-and-MO_316045643888_001-1657580036/staged_job_files/repository/md/MEAM_LAMMPS__MD_249792265679_001/libkim-api-model-driver.so) ==35186== by 0x119B32DE7: MEAM::MEAM(KIM::ModelDriverCreate*, KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, int*) (in /work2/08773/bwaters/stampede2/bwaters/job-d9dd6b62-3a45-4052-b39b-418a9703dfee-007-bc7401c1-4d8d-4434-a026-dd3939083832/VC_561022993723_003-and-MO_316045643888_001-1657580036/staged_job_files/repository/md/MEAM_LAMMPS__MD_249792265679_001/libkim-api-model-driver.so) ==35186== by 0x119B365CE: ModelDriverCreateRoutine (in /work2/08773/bwaters/stampede2/bwaters/job-d9dd6b62-3a45-4052-b39b-418a9703dfee-007-bc7401c1-4d8d-4434-a026-dd3939083832/VC_561022993723_003-and-MO_316045643888_001-1657580036/staged_job_files/repository/md/MEAM_LAMMPS__MD_249792265679_001/libkim-api-model-driver.so) ==35186== by 0x33E65F1E: KIM::ModelImplementation::InitializeParameterizedModel(KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, KIM::Collections*) (in /usr/local/lib/libkim-api.so.2.2.1) ==35186== by 0x33E66E18: KIM::ModelImplementation::ModelCreate(KIM::Numbering, KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, std::__cxx11::basic_string, std::allocator > const&) (in /usr/local/lib/libkim-api.so.2.2.1) ==35186== by 0x33E6B762: KIM::ModelImplementation::Create(KIM::Numbering, KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, std::__cxx11::basic_string, std::allocator > const&, int*, KIM::ModelImplementation**) (in /usr/local/lib/libkim-api.so.2.2.1) ==35186== by 0x33E1B246: KIM::Model::Create(KIM::Numbering, KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, std::__cxx11::basic_string, std::allocator > const&, int*, KIM::Model**) (in /usr/local/lib/libkim-api.so.2.2.1) ==35186== by 0x22BFC4C7: void pybind11::cpp_function::initialize, std::allocator > const&)#21}, pybind11::tuple, KIM::Numbering const&, KIM::LengthUnit const&, KIM::EnergyUnit const&, KIM::ChargeUnit const&, KIM::TemperatureUnit const&, KIM::TimeUnit const&, std::__cxx11::basic_string, std::allocator > const&, pybind11::name, pybind11::scope, pybind11::sibling, char [115], pybind11::arg, char [115], char [115], char [115], char [115], char [115], char [115]>(pybind11_init_model(pybind11::module_&)::{lambda(KIM::Numbering const&, KIM::LengthUnit const&, KIM::EnergyUnit const&, KIM::ChargeUnit const&, KIM::TemperatureUnit const&, KIM::TimeUnit const&, std::__cxx11::basic_string, std::allocator > const&)#21}&&, pybind11::tuple (*)(KIM::Numbering const&, KIM::LengthUnit const&, KIM::EnergyUnit const&, KIM::ChargeUnit const&, KIM::TemperatureUnit const&, KIM::TimeUnit const&, std::__cxx11::basic_string, std::allocator > const&), pybind11::name const&, pybind11::scope const&, pybind11::sibling const&, char const (&) [115], pybind11::arg const&, char const (&) [115], char const (&) [115], char const (&) [115], char const (&) [115], char const (&) [115], char const (&) [115])::{lambda(pybind11::detail::function_call&)#3}::_FUN(pybind11::detail::function_call) (KIM_Model_bind.cpp:400) ==35186== by 0x22C102E3: pybind11::cpp_function::dispatcher(_object*, _object*, _object*) (pybind11.h:792) ==35186== Address 0x3edac3c0 is 0 bytes inside a block of size 1,024 alloc'd ==35186== at 0x483C583: operator new[](unsigned long) (in /usr/lib/x86_64-linux-gnu/valgrind/vgpreload_memcheck-amd64-linux.so) ==35186== by 0x119C6FBAB: MEAMC::ProcessParameterFile(_IO_FILE*, int) (in /work2/08773/bwaters/stampede2/bwaters/job-d9dd6b62-3a45-4052-b39b-418a9703dfee-007-bc7401c1-4d8d-4434-a026-dd3939083832/VC_561022993723_003-and-MO_316045643888_001-1657580036/staged_job_files/repository/md/MEAM_LAMMPS__MD_249792265679_001/libkim-api-model-driver.so) ==35186== by 0x119B48578: MEAMImplementation::ProcessParameterFiles(KIM::ModelDriverCreate*, int, _IO_FILE* const*) (in /work2/08773/bwaters/stampede2/bwaters/job-d9dd6b62-3a45-4052-b39b-418a9703dfee-007-bc7401c1-4d8d-4434-a026-dd3939083832/VC_561022993723_003-and-MO_316045643888_001-1657580036/staged_job_files/repository/md/MEAM_LAMMPS__MD_249792265679_001/libkim-api-model-driver.so) ==35186== by 0x119B49C83: MEAMImplementation::MEAMImplementation(KIM::ModelDriverCreate*, KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, int*) (in /work2/08773/bwaters/stampede2/bwaters/job-d9dd6b62-3a45-4052-b39b-418a9703dfee-007-bc7401c1-4d8d-4434-a026-dd3939083832/VC_561022993723_003-and-MO_316045643888_001-1657580036/staged_job_files/repository/md/MEAM_LAMMPS__MD_249792265679_001/libkim-api-model-driver.so) ==35186== by 0x119B32DE7: MEAM::MEAM(KIM::ModelDriverCreate*, KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, int*) (in /work2/08773/bwaters/stampede2/bwaters/job-d9dd6b62-3a45-4052-b39b-418a9703dfee-007-bc7401c1-4d8d-4434-a026-dd3939083832/VC_561022993723_003-and-MO_316045643888_001-1657580036/staged_job_files/repository/md/MEAM_LAMMPS__MD_249792265679_001/libkim-api-model-driver.so) ==35186== by 0x119B365CE: ModelDriverCreateRoutine (in /work2/08773/bwaters/stampede2/bwaters/job-d9dd6b62-3a45-4052-b39b-418a9703dfee-007-bc7401c1-4d8d-4434-a026-dd3939083832/VC_561022993723_003-and-MO_316045643888_001-1657580036/staged_job_files/repository/md/MEAM_LAMMPS__MD_249792265679_001/libkim-api-model-driver.so) ==35186== by 0x33E65F1E: KIM::ModelImplementation::InitializeParameterizedModel(KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, KIM::Collections*) (in /usr/local/lib/libkim-api.so.2.2.1) ==35186== by 0x33E66E18: KIM::ModelImplementation::ModelCreate(KIM::Numbering, KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, std::__cxx11::basic_string, std::allocator > const&) (in /usr/local/lib/libkim-api.so.2.2.1) ==35186== by 0x33E6B762: KIM::ModelImplementation::Create(KIM::Numbering, KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, std::__cxx11::basic_string, std::allocator > const&, int*, KIM::ModelImplementation**) (in /usr/local/lib/libkim-api.so.2.2.1) ==35186== by 0x33E1B246: KIM::Model::Create(KIM::Numbering, KIM::LengthUnit, KIM::EnergyUnit, KIM::ChargeUnit, KIM::TemperatureUnit, KIM::TimeUnit, std::__cxx11::basic_string, std::allocator > const&, int*, KIM::Model**) (in /usr/local/lib/libkim-api.so.2.2.1) ==35186== by 0x22BFC4C7: void pybind11::cpp_function::initialize, std::allocator > const&)#21}, pybind11::tuple, KIM::Numbering const&, KIM::LengthUnit const&, KIM::EnergyUnit const&, KIM::ChargeUnit const&, KIM::TemperatureUnit const&, KIM::TimeUnit const&, std::__cxx11::basic_string, std::allocator > const&, pybind11::name, pybind11::scope, pybind11::sibling, char [115], pybind11::arg, char [115], char [115], char [115], char [115], char [115], char [115]>(pybind11_init_model(pybind11::module_&)::{lambda(KIM::Numbering const&, KIM::LengthUnit const&, KIM::EnergyUnit const&, KIM::ChargeUnit const&, KIM::TemperatureUnit const&, KIM::TimeUnit const&, std::__cxx11::basic_string, std::allocator > const&)#21}&&, pybind11::tuple (*)(KIM::Numbering const&, KIM::LengthUnit const&, KIM::EnergyUnit const&, KIM::ChargeUnit const&, KIM::TemperatureUnit const&, KIM::TimeUnit const&, std::__cxx11::basic_string, std::allocator > const&), pybind11::name const&, pybind11::scope const&, pybind11::sibling const&, char const (&) [115], pybind11::arg const&, char const (&) [115], char const (&) [115], char const (&) [115], char const (&) [115], char const (&) [115], char const (&) [115])::{lambda(pybind11::detail::function_call&)#3}::_FUN(pybind11::detail::function_call) (KIM_Model_bind.cpp:400) ==35186== by 0x22C102E3: pybind11::cpp_function::dispatcher(_object*, _object*, _object*) (pybind11.h:792) ==35186== ==35186== ==35186== HEAP SUMMARY: ==35186== in use at exit: 2,202,999 bytes in 1,640 blocks ==35186== total heap usage: 50,286 allocs, 48,646 frees, 79,079,290 bytes allocated ==35186== ==35186== LEAK SUMMARY: ==35186== definitely lost: 0 bytes in 0 blocks ==35186== indirectly lost: 0 bytes in 0 blocks ==35186== possibly lost: 198,622 bytes in 101 blocks ==35186== still reachable: 2,004,345 bytes in 1,538 blocks ==35186== suppressed: 32 bytes in 1 blocks ==35186== Rerun with --leak-check=full to see details of leaked memory ==35186== ==35186== For lists of detected and suppressed errors, rerun with: -s ==35186== ERROR SUMMARY: 8 errors from 2 contexts (suppressed: 9022 from 563) ================================================================================ To pass this verification check the number of bytes that are "definitely lost" or "indirectly lost" must be zero. NOTE that Valgrind will typically report non-zero "possibly lost" bytes due to Python's internal memory allocation and garbage collection that it does not monitor. Full Valgrind output written to auxiliary file "valgrind.out" Grade: P Comment: No memory leak detected.