Traceback (most recent call last): File "/work2/08773/bwaters/stampede2/bwaters/job-3bfe0b09-4d59-4823-8f6a-1de7230f6385-007-42d7bd0c-bdd6-40f0-9676-e10fb1932c44/VC_561022993723_004-and-MO_708495328010_002-1683670029/staged_job_files/repository/vc/MemoryLeak__VC_561022993723_004/runner", line 49, in File "/work2/08773/bwaters/stampede2/bwaters/job-3bfe0b09-4d59-4823-8f6a-1de7230f6385-007-42d7bd0c-bdd6-40f0-9676-e10fb1932c44/VC_561022993723_004-and-MO_708495328010_002-1683670029/staged_job_files/repository/vc/MemoryLeak__VC_561022993723_004/runner2.py", line 43, in File "/usr/local/lib/python3.8/dist-packages/ase/lattice/__init__.py", line 8, in from ase.build.bulk import bulk as newbulk File "/usr/local/lib/python3.8/dist-packages/ase/build/__init__.py", line 17, in from ase.build.connected import (connected_atoms, connected_indices, File "/usr/local/lib/python3.8/dist-packages/ase/build/connected.py", line 3, in from ase.neighborlist import NeighborList File "/usr/local/lib/python3.8/dist-packages/ase/neighborlist.py", line 3, in from scipy import sparse as sp File "/usr/local/lib/python3.8/dist-packages/scipy/__init__.py", line 200, in __getattr__ return _importlib.import_module(f'scipy.{name}') File "/usr/lib/python3.8/importlib/__init__.py", line 127, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/local/lib/python3.8/dist-packages/scipy/sparse/__init__.py", line 283, in from . import csgraph File "/usr/local/lib/python3.8/dist-packages/scipy/sparse/csgraph/__init__.py", line 185, in from ._laplacian import laplacian File "/usr/local/lib/python3.8/dist-packages/scipy/sparse/csgraph/_laplacian.py", line 7, in from scipy.sparse.linalg import LinearOperator File "/usr/local/lib/python3.8/dist-packages/scipy/sparse/linalg/__init__.py", line 120, in from ._isolve import * File "/usr/local/lib/python3.8/dist-packages/scipy/sparse/linalg/_isolve/__init__.py", line 6, in from .lgmres import lgmres File "/usr/local/lib/python3.8/dist-packages/scipy/sparse/linalg/_isolve/lgmres.py", line 7, in from scipy.linalg import get_blas_funcs File "/usr/local/lib/python3.8/dist-packages/scipy/linalg/__init__.py", line 209, in from ._matfuncs import * File "/usr/local/lib/python3.8/dist-packages/scipy/linalg/_matfuncs.py", line 19, in from ._matfuncs_sqrtm import sqrtm File "/usr/local/lib/python3.8/dist-packages/scipy/linalg/_matfuncs_sqrtm.py", line 24, in from ._matfuncs_sqrtm_triu import within_block_loop ImportError: /usr/local/lib/python3.8/dist-packages/scipy/linalg/_matfuncs_sqrtm_triu.cpython-38-x86_64-linux-gnu.so: failed to map segment from shared object Command exited with non-zero status 1 {"realtime":3.34,"usertime":6.44,"systime":19.85,"memmax":75548,"memavg":0}