Title
A single sentence description.
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Efficient KIM model driver for the multi-species Lennard-Jones model with truncated or shifted cutoff |
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Description | This is a driver, tuned for efficiency, for the Lennard-Jones (LJ) 6-12 pair potential model. It supports the option to be truncated to have zero energy above a specified cutoff radius or shifted to have a continuous energy at the cutoff radius. The driver is capable of supporting multiple species interactions. If only "like-like" interactions are specified then the driver use the Lorentz-Berthelot mixing rules to generate the unlike interaction parameters. See the README file for details. Version 002 fixes the unit conversion for the cutoffs and sigma values. |
Disclaimer
A statement of applicability provided by the contributor, informing users of the intended use of this KIM Item.
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None |
Contributor |
Ryan S. Elliott |
Maintainer |
Ryan S. Elliott |
Published on KIM | 2018 |
How to Cite | Click here to download this citation in BibTeX format. |
Funding | Not available |
Short KIM ID
The unique KIM identifier code.
| MD_414112407348_002 |
Extended KIM ID
The long form of the KIM ID including a human readable prefix (100 characters max), two underscores, and the Short KIM ID. Extended KIM IDs can only contain alpha-numeric characters (letters and digits) and underscores and must begin with a letter.
| LennardJones612__MD_414112407348_002 |
Citable Link | https://openkim.org/cite/MD_414112407348_002 |
KIM Item Type | Model Driver |
KIM API Version | 1.6 |
Programming Language(s)
The programming languages used in the code and the percentage of the code written in each one.
| 93.93% C++ 6.07% Shell |
Previous Version | LennardJones612__MD_414112407348_001 |
LennardJones612__MD_414112407348_002.txz | Tar+XZ | Linux and OS X archive |
LennardJones612__MD_414112407348_002.zip | Zip | Windows archive |
This Model Driver implements the Stillinger-Weber three-body potential
Symbols:
\[a, A, B, p, q, \sigma, \lambda, \gamma\]Corresponding variables in code:
a, A, B,p, q, sigma, lamda, gamma
The total potential energy function \(\phi\) for Si crystal is approximated by a combination of a pair and three-body potential \(v_2\) and \(v_3\) respectively. It takes the following form:
\[\phi = \sum_{i,j; i<j} v_2(i,j) + \sum_{i,j,k; i<j<k} v_3(i,j,k)\]Where
\[v_2(r_{ij}) = \epsilon f_2(r_{ij}/\sigma)\] \[v_3(\mathbf{r}_i ,\mathbf{r}_j, \mathbf{r}_k) = \epsilon f_3(\mathbf{r}_i/\sigma, \mathbf{r}_j/\sigma, \mathbf{r}_k/\sigma)\]The function \(f_2\) has the following form:
\[f_2(r) = \begin{cases} A(Br^{-p} - r^{-q})\exp[(r-a)^{-1}] & \text{if } r < a\\ 0 & \text{if }r >=a\\ \end{cases}\]The function \(f_3\) takes the form:
\[f_3(\mathbf{r}_i, \mathbf{r}_j, \mathbf{r}_k) = h(r_{ij},r_{ik},\theta_{jik}) + h(r_{ji},r_{jk},\theta_{ijk}) + h(r_{ki},r_{kj},\theta_{ikj})\]where
\[h(r_{ij},r_{ik},\theta_{jik}) = \lambda \exp[\gamma(r_{ij}-a)^{-1} + \gamma(r_{ik}-a)^{-1}](\cos\theta_{jik} + 1/3)^2\]The term \((\cos\theta_{jik} + 1/3)^2\) is a penalty term which makes \(h\) vanish for the ideal tetrahedral angle i.e. \(\cos\theta = -1/3\).