Title
A single sentence description.
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EAM potential (LAMMPS cubic hermite tabulation) for Pd-Ag-H ternary alloy system developed by Hale et al. (2013) (Morse Pd-Ag interactions) v005 |
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Description
A short description of the Model describing its key features including for example: type of model (pair potential, 3-body potential, EAM, etc.), modeled species (Ac, Ag, ..., Zr), intended purpose, origin, and so on.
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EAM alloy potential developed by Hale et al. (2013) to accurately reproduce properties of the Pd-Ag-H alloy system (Morse F2 Pd-Ag pair function). |
Species
The supported atomic species.
| Ag, H, Pd |
Disclaimer
A statement of applicability provided by the contributor, informing users of the intended use of this KIM Item.
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Potential developed for the Pd-Ag-H system, where Ag is substitutional for Pd, and H is interstitial. Application of this potential to pure H, or other Pd-Ag-H compounds is not recommended. |
Contributor |
Ryan S. Elliott |
Maintainer |
Ryan S. Elliott |
Developer |
Lucas Hale Bryan M. Wong Jonathan A. Zimmerman Xiaowang Zhou |
Published on KIM | 2018 |
How to Cite |
This Model originally published in [1-2] is archived in OpenKIM [3-6]. [1] Hale LM, Wong BM, Zimmerman JA, Zhou XW. Atomistic potentials for palladium–silver hydrides. Modelling and Simulation in Materials Science and Engineering. 2013;21(4):045005. doi:10.1088/0965-0393/21/4/045005 — (Primary Source) A primary source is a reference directly related to the item documenting its development, as opposed to other sources that are provided as background information. [2] Zhou XW, Zimmerman JA, Wong BM, Hoyt JJ. An embedded-atom method interatomic potential for Pd–H alloys. Journal of Materials Research. 2008;23(3):704–18. doi:10.1557/JMR.2008.0090 [3] Hale L, Wong BM, Zimmerman JA, Zhou X. EAM potential (LAMMPS cubic hermite tabulation) for Pd-Ag-H ternary alloy system developed by Hale et al. (2013) (Morse Pd-Ag interactions) v005. OpenKIM; 2018. doi:10.25950/ebe6d53c [4] Foiles SM, Baskes MI, Daw MS, Plimpton SJ. EAM Model Driver for tabulated potentials with cubic Hermite spline interpolation as used in LAMMPS v005. OpenKIM; 2018. doi:10.25950/68defa36 [5] Tadmor EB, Elliott RS, Sethna JP, Miller RE, Becker CA. The potential of atomistic simulations and the Knowledgebase of Interatomic Models. JOM. 2011;63(7):17. doi:10.1007/s11837-011-0102-6 [6] Elliott RS, Tadmor EB. Knowledgebase of Interatomic Models (KIM) Application Programming Interface (API). OpenKIM; 2011. doi:10.25950/ff8f563a Click here to download the above citation in BibTeX format. |
Citations
This panel presents information regarding the papers that have cited the interatomic potential (IP) whose page you are on. The OpenKIM machine learning based Deep Citation framework is used to determine whether the citing article actually used the IP in computations (denoted by "USED") or only provides it as a background citation (denoted by "NOT USED"). For more details on Deep Citation and how to work with this panel, click the documentation link at the top of the panel. The word cloud to the right is generated from the abstracts of IP principle source(s) (given below in "How to Cite") and the citing articles that were determined to have used the IP in order to provide users with a quick sense of the types of physical phenomena to which this IP is applied. The bar chart shows the number of articles that cited the IP per year. Each bar is divided into green (articles that USED the IP) and blue (articles that did NOT USE the IP). Users are encouraged to correct Deep Citation errors in determination by clicking the speech icon next to a citing article and providing updated information. This will be integrated into the next Deep Citation learning cycle, which occurs on a regular basis. OpenKIM acknowledges the support of the Allen Institute for AI through the Semantic Scholar project for providing citation information and full text of articles when available, which are used to train the Deep Citation ML algorithm. |
This panel provides information on past usage of this interatomic potential (IP) powered by the OpenKIM Deep Citation framework. The word cloud indicates typical applications of the potential. The bar chart shows citations per year of this IP (bars are divided into articles that used the IP (green) and those that did not (blue)). The complete list of articles that cited this IP is provided below along with the Deep Citation determination on usage. See the Deep Citation documentation for more information.
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Funding | Not available |
Short KIM ID
The unique KIM identifier code.
| MO_108983864770_005 |
Extended KIM ID
The long form of the KIM ID including a human readable prefix (100 characters max), two underscores, and the Short KIM ID. Extended KIM IDs can only contain alpha-numeric characters (letters and digits) and underscores and must begin with a letter.
| EAM_Dynamo_HaleWongZimmerman_2008PairMorse_PdAgH__MO_108983864770_005 |
DOI |
10.25950/ebe6d53c https://doi.org/10.25950/ebe6d53c https://commons.datacite.org/doi.org/10.25950/ebe6d53c |
KIM Item Type
Specifies whether this is a Portable Model (software implementation of an interatomic model); Portable Model with parameter file (parameter file to be read in by a Model Driver); Model Driver (software implementation of an interatomic model that reads in parameters).
| Portable Model using Model Driver EAM_Dynamo__MD_120291908751_005 |
Driver | EAM_Dynamo__MD_120291908751_005 |
KIM API Version | 2.0 |
Potential Type | eam |
Previous Version | EAM_Dynamo_HaleWongZimmerman_2008PairMorse_PdAgH__MO_108983864770_004 |
Grade | Name | Category | Brief Description | Full Results | Aux File(s) |
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P | vc-species-supported-as-stated | mandatory | The model supports all species it claims to support; see full description. |
Results | Files |
P | vc-periodicity-support | mandatory | Periodic boundary conditions are handled correctly; see full description. |
Results | Files |
P | vc-permutation-symmetry | mandatory | Total energy and forces are unchanged when swapping atoms of the same species; see full description. |
Results | Files |
B | vc-forces-numerical-derivative | consistency | Forces computed by the model agree with numerical derivatives of the energy; see full description. |
Results | Files |
F | vc-dimer-continuity-c1 | informational | The energy versus separation relation of a pair of atoms is C1 continuous (i.e. the function and its first derivative are continuous); see full description. |
Results | Files |
P | vc-objectivity | informational | Total energy is unchanged and forces transform correctly under rigid-body translation and rotation; see full description. |
Results | Files |
P | vc-inversion-symmetry | informational | Total energy is unchanged and forces change sign when inverting a configuration through the origin; see full description. |
Results | Files |
N/A | vc-memory-leak | informational | The model code does not have memory leaks (i.e. it releases all allocated memory at the end); see full description. |
Results | Files |
P | vc-thread-safe | mandatory | The model returns the same energy and forces when computed in serial and when using parallel threads for a set of configurations. Note that this is not a guarantee of thread safety; see full description. |
Results | Files |
P | vc-unit-conversion | mandatory | The model is able to correctly convert its energy and/or forces to different unit sets; see full description. |
Results | Files |
This bar chart plot shows the mono-atomic body-centered cubic (bcc) lattice constant predicted by the current model (shown in the unique color) compared with the predictions for all other models in the OpenKIM Repository that support the species. The vertical bars show the average and standard deviation (one sigma) bounds for all model predictions. Graphs are generated for each species supported by the model.
This graph shows the cohesive energy versus volume-per-atom for the current mode for four mono-atomic cubic phases (body-centered cubic (bcc), face-centered cubic (fcc), simple cubic (sc), and diamond). The curve with the lowest minimum is the ground state of the crystal if stable. (The crystal structure is enforced in these calculations, so the phase may not be stable.) Graphs are generated for each species supported by the model.
This bar chart plot shows the mono-atomic face-centered diamond lattice constant predicted by the current model (shown in the unique color) compared with the predictions for all other models in the OpenKIM Repository that support the species. The vertical bars show the average and standard deviation (one sigma) bounds for all model predictions. Graphs are generated for each species supported by the model.
This graph shows the dislocation core energy of a cubic crystal at zero temperature and pressure for a specific set of dislocation core cutoff radii. After obtaining the total energy of the system from conjugate gradient minimizations, non-singular, isotropic and anisotropic elasticity are applied to obtain the dislocation core energy for each of these supercells with different dipole distances. Graphs are generated for each species supported by the model.
(No matching species)This bar chart plot shows the mono-atomic face-centered cubic (fcc) elastic constants predicted by the current model (shown in blue) compared with the predictions for all other models in the OpenKIM Repository that support the species. The vertical bars show the average and standard deviation (one sigma) bounds for all model predictions. Graphs are generated for each species supported by the model.
This bar chart plot shows the mono-atomic face-centered cubic (fcc) lattice constant predicted by the current model (shown in red) compared with the predictions for all other models in the OpenKIM Repository that support the species. The vertical bars show the average and standard deviation (one sigma) bounds for all model predictions. Graphs are generated for each species supported by the model.
This bar chart plot shows the intrinsic and extrinsic stacking fault energies as well as the unstable stacking and unstable twinning energies for face-centered cubic (fcc) predicted by the current model (shown in blue) compared with the predictions for all other models in the OpenKIM Repository that support the species. The vertical bars show the average and standard deviation (one sigma) bounds for all model predictions. Graphs are generated for each species supported by the model.
This bar chart plot shows the mono-atomic face-centered cubic (fcc) relaxed surface energies predicted by the current model (shown in blue) compared with the predictions for all other models in the OpenKIM Repository that support the species. The vertical bars show the average and standard deviation (one sigma) bounds for all model predictions. Graphs are generated for each species supported by the model.
This bar chart plot shows the mono-atomic simple cubic (sc) lattice constant predicted by the current model (shown in the unique color) compared with the predictions for all other models in the OpenKIM Repository that support the species. The vertical bars show the average and standard deviation (one sigma) bounds for all model predictions. Graphs are generated for each species supported by the model.
Potential developed for the Pd-Ag-H system, where Ag is substitutional for Pd, and H is interstitial. Application of this potential to pure H, or other Pd-Ag-H compounds is not recommended.
Test | Test Results | Link to Test Results page | Benchmark time
Usertime multiplied by the Whetstone Benchmark. This number can be used (approximately) to compare the performance of different models independently of the architecture on which the test was run.
Measured in Millions of Whetstone Instructions (MWI) |
---|---|---|---|
Cohesive energy versus lattice constant curve for bcc Ag v004 | view | 5703 | |
Cohesive energy versus lattice constant curve for bcc Pd v004 | view | 3859 | |
Cohesive energy versus lattice constant curve for diamond Ag v004 | view | 4038 | |
Cohesive energy versus lattice constant curve for diamond Pd v004 | view | 3859 | |
Cohesive energy versus lattice constant curve for fcc Ag v004 | view | 4344 | |
Cohesive energy versus lattice constant curve for fcc Pd v004 | view | 3491 | |
Cohesive energy versus lattice constant curve for sc Ag v004 | view | 4196 | |
Cohesive energy versus lattice constant curve for sc Pd v004 | view | 3959 |
Test | Test Results | Link to Test Results page | Benchmark time
Usertime multiplied by the Whetstone Benchmark. This number can be used (approximately) to compare the performance of different models independently of the architecture on which the test was run.
Measured in Millions of Whetstone Instructions (MWI) |
---|---|---|---|
Elastic constants for bcc Ag at zero temperature v006 | view | 1759 | |
Elastic constants for bcc H at zero temperature v006 | view | 2303 | |
Elastic constants for bcc Pd at zero temperature v006 | view | 2143 | |
Elastic constants for fcc Ag at zero temperature v006 | view | 1887 | |
Elastic constants for fcc H at zero temperature v006 | view | 2175 | |
Elastic constants for fcc Pd at zero temperature v006 | view | 1887 | |
Elastic constants for sc Ag at zero temperature v006 | view | 5758 | |
Elastic constants for sc H at zero temperature v006 | view | 1727 | |
Elastic constants for sc Pd at zero temperature v006 | view | 5662 |
Test | Test Results | Link to Test Results page | Benchmark time
Usertime multiplied by the Whetstone Benchmark. This number can be used (approximately) to compare the performance of different models independently of the architecture on which the test was run.
Measured in Millions of Whetstone Instructions (MWI) |
---|---|---|---|
Elastic constants for hcp Ag at zero temperature v004 | view | 2579 | |
Elastic constants for hcp H at zero temperature v004 | view | 2069 | |
Elastic constants for hcp Pd at zero temperature v004 | view | 1624 |
Test | Test Results | Link to Test Results page | Benchmark time
Usertime multiplied by the Whetstone Benchmark. This number can be used (approximately) to compare the performance of different models independently of the architecture on which the test was run.
Measured in Millions of Whetstone Instructions (MWI) |
---|---|---|---|
Equilibrium crystal structure and energy for Ag in AFLOW crystal prototype A_cF4_225_a v001 | view | 77154 | |
Equilibrium crystal structure and energy for Ag in AFLOW crystal prototype A_hP2_194_c v001 | view | 71706 | |
Equilibrium crystal structure and energy for Ag in AFLOW crystal prototype A_hP4_194_ac v001 | view | 72001 |
Test | Test Results | Link to Test Results page | Benchmark time
Usertime multiplied by the Whetstone Benchmark. This number can be used (approximately) to compare the performance of different models independently of the architecture on which the test was run.
Measured in Millions of Whetstone Instructions (MWI) |
---|---|---|---|
Equilibrium crystal structure and energy for Pd in AFLOW crystal prototype A_cF4_225_a v002 | view | 55656 | |
Equilibrium crystal structure and energy for H in AFLOW crystal prototype A_cI2_229_a v002 | view | 56871 | |
Equilibrium crystal structure and energy for H in AFLOW crystal prototype A_hP2_194_c v002 | view | 145916 | |
Equilibrium crystal structure and energy for H in AFLOW crystal prototype A_hP4_194_f v002 | view | 94455 | |
Equilibrium crystal structure and energy for HPd in AFLOW crystal prototype AB_cF8_225_a_b v002 | view | 62765 |
Test | Test Results | Link to Test Results page | Benchmark time
Usertime multiplied by the Whetstone Benchmark. This number can be used (approximately) to compare the performance of different models independently of the architecture on which the test was run.
Measured in Millions of Whetstone Instructions (MWI) |
---|---|---|---|
Equilibrium lattice constants for hcp Ag v005 | view | 17160 | |
Equilibrium lattice constants for hcp H v005 | view | 28493 | |
Equilibrium lattice constants for hcp Pd v005 | view | 21585 |
Test | Test Results | Link to Test Results page | Benchmark time
Usertime multiplied by the Whetstone Benchmark. This number can be used (approximately) to compare the performance of different models independently of the architecture on which the test was run.
Measured in Millions of Whetstone Instructions (MWI) |
---|---|---|---|
Linear thermal expansion coefficient of fcc Ag at 293.15 K under a pressure of 0 MPa v001 | view | 3618692 |
Test | Test Results | Link to Test Results page | Benchmark time
Usertime multiplied by the Whetstone Benchmark. This number can be used (approximately) to compare the performance of different models independently of the architecture on which the test was run.
Measured in Millions of Whetstone Instructions (MWI) |
---|---|---|---|
Linear thermal expansion coefficient of fcc Pd at 293.15 K under a pressure of 0 MPa v002 | view | 477452 |
Test | Test Results | Link to Test Results page | Benchmark time
Usertime multiplied by the Whetstone Benchmark. This number can be used (approximately) to compare the performance of different models independently of the architecture on which the test was run.
Measured in Millions of Whetstone Instructions (MWI) |
---|---|---|---|
Phonon dispersion relations for fcc Ag v004 | view | 53518 | |
Phonon dispersion relations for fcc Pd v004 | view | 47728 |
Test | Test Results | Link to Test Results page | Benchmark time
Usertime multiplied by the Whetstone Benchmark. This number can be used (approximately) to compare the performance of different models independently of the architecture on which the test was run.
Measured in Millions of Whetstone Instructions (MWI) |
---|---|---|---|
Stacking and twinning fault energies for fcc Ag v002 | view | 6088658 | |
Stacking and twinning fault energies for fcc Pd v002 | view | 8402231 |
Test | Test Results | Link to Test Results page | Benchmark time
Usertime multiplied by the Whetstone Benchmark. This number can be used (approximately) to compare the performance of different models independently of the architecture on which the test was run.
Measured in Millions of Whetstone Instructions (MWI) |
---|---|---|---|
Broken-bond fit of high-symmetry surface energies in fcc Ag v004 | view | 25719 | |
Broken-bond fit of high-symmetry surface energies in fcc Pd v004 | view | 27511 |
Test | Test Results | Link to Test Results page | Benchmark time
Usertime multiplied by the Whetstone Benchmark. This number can be used (approximately) to compare the performance of different models independently of the architecture on which the test was run.
Measured in Millions of Whetstone Instructions (MWI) |
---|---|---|---|
Monovacancy formation energy and relaxation volume for fcc Ag | view | 354188 | |
Monovacancy formation energy and relaxation volume for fcc Pd | view | 366998 |
Test | Test Results | Link to Test Results page | Benchmark time
Usertime multiplied by the Whetstone Benchmark. This number can be used (approximately) to compare the performance of different models independently of the architecture on which the test was run.
Measured in Millions of Whetstone Instructions (MWI) |
---|---|---|---|
Vacancy formation and migration energy for fcc Ag | view | 2949384 | |
Vacancy formation and migration energy for fcc Pd | view | 3197191 |
Test | Error Categories | Link to Error page |
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Elastic constants for diamond Ag at zero temperature v001 | other | view |
Elastic constants for diamond H at zero temperature v001 | other | view |
Elastic constants for diamond Pd at zero temperature v001 | other | view |
Test | Error Categories | Link to Error page |
---|---|---|
Equilibrium crystal structure and energy for H in AFLOW crystal prototype A_tP1_123_a v002 | other | view |
Test | Error Categories | Link to Error page |
---|---|---|
Equilibrium zero-temperature lattice constant for diamond Ag | other | view |
Verification Check | Error Categories | Link to Error page |
---|---|---|
MemoryLeak__VC_561022993723_004 | other | view |
EAM_Dynamo_HaleWongZimmerman_2008PairMorse_PdAgH__MO_108983864770_005.txz | Tar+XZ | Linux and OS X archive |
EAM_Dynamo_HaleWongZimmerman_2008PairMorse_PdAgH__MO_108983864770_005.zip | Zip | Windows archive |
This Model requires a Model Driver. Archives for the Model Driver EAM_Dynamo__MD_120291908751_005 appear below.
EAM_Dynamo__MD_120291908751_005.txz | Tar+XZ | Linux and OS X archive |
EAM_Dynamo__MD_120291908751_005.zip | Zip | Windows archive |