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EquilibriumCrystalStructure_Unconstrained_TypeLabels__TD_495406822220_000

Title
A single sentence description.
Equilibrium structure and energy for a crystal specified using LAMMPS type labels at zero temperature and pressure v000
Description Computes the equilibrium crystal structure and energy for an arbitrary crystal at zero temperature and applied stress by performing an unconstrained structural relaxation of the unit cell and atomic positions. One or more initial guesses are specified as LAMMPS data files using type labels. Each unique crystal structure found after the relaxations is reported using the AFLOW prototype designation. No guarantee is made regarding the stability of computed equilibria, nor that any are the ground state.
Disclaimer
A statement of applicability provided by the contributor, informing users of the intended use of this KIM Item.
None
Contributor I Nikiforov
Maintainer I Nikiforov
Developer I Nikiforov
Ellad B. Tadmor
Moon-ki Choi
Daniel S. Karls
Published on KIM 2023
How to Cite

This Test Driver is archived in OpenKIM [1-3].

[1] Nikiforov I, Tadmor EB, Choi M-ki, Karls DS. Equilibrium structure and energy for a crystal specified using LAMMPS type labels at zero temperature and pressure v000. OpenKIM; 2023. doi:10.25950/86dce899

[2] Tadmor EB, Elliott RS, Sethna JP, Miller RE, Becker CA. The potential of atomistic simulations and the Knowledgebase of Interatomic Models. JOM. 2011;63(7):17. doi:10.1007/s11837-011-0102-6

[3] Elliott RS, Tadmor EB. Knowledgebase of Interatomic Models (KIM) Application Programming Interface (API). OpenKIM; 2011. doi:10.25950/ff8f563a

Click here to download the above citation in BibTeX format.
Funding Award Title: Collaborative Research: Reliable Materials Simulation based on the Knowledgebase of Interatomic Models (KIM)
Award Number: NSF DMR-1834251
Funder: National Science Foundation

Short KIM ID
The unique KIM identifier code.
TD_495406822220_000
Extended KIM ID
The long form of the KIM ID including a human readable prefix (100 characters max), two underscores, and the Short KIM ID. Extended KIM IDs can only contain alpha-numeric characters (letters and digits) and underscores and must begin with a letter.
EquilibriumCrystalStructure_Unconstrained_TypeLabels__TD_495406822220_000
DOI 10.25950/86dce899
https://doi.org/10.25950/86dce899
https://commons.datacite.org/doi.org/10.25950/86dce899
KIM Item TypeTest Driver
Properties
Properties as defined in kimspec.edn.
KIM API Version2.3
Simulator Name
The name of the simulator as defined in kimspec.edn.
LAMMPS
Programming Language(s)
The programming languages used in the code and the percentage of the code written in each one.
99.41% Python
0.59% Shell

Tests using this Test Driver

EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Actinium__TE_597964364715_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Alpha_Cristobalite__TE_610986400767_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Alpha_Quartz__TE_723122523764_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Aluminum_Oxide__TE_949159786812_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Aluminum__TE_127974406309_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Anhydrite__TE_889550055760_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Calcium_Hydroxide__TE_290999115954_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Calcium_Oxide__TE_816860586933_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Calcium__TE_155275770946_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Cerium__TE_192291552296_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Chromium_Oxide__TE_396348672999_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Copper__TE_223045501550_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Einsteinium__TE_477588950321_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Gold__TE_567848581181_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Graphite__TE_406365327721_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Gypsum__TE_786449451894_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Hemihydrate__TE_408150552107_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Iridium__TE_185896031186_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Iron_Oxide__TE_213961911992_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Iron__TE_484833569828_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Kaolinite__TE_770977003873_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Lead__TE_197677336795_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Lithium_Cobalt_Oxide__TE_278739671768_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Magnesium_Hydroxide__TE_760940522921_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Magnesium_Oxide__TE_400345532746_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Molybdenum_Disulfide__TE_872188620196_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Montmorillonite__TE_912341279351_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Muscovite__TE_755120994678_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Nickel_Hydroxide__TE_190023696711_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Nickel_Oxide__TE_784462135228_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Nickel__TE_966841164937_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Palladium__TE_349496708972_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Platinum__TE_302533303643_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Pyrophyllite__TE_850892375316_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Rhodium__TE_781546079162_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Silver__TE_967841411038_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Strontium__TE_353530475638_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Thorium__TE_407162758668_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Tobermorite__TE_046183663521_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Tricalcium_Aluminate__TE_889636295875_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Tricalcium_Silicate__TE_356659368071_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Tungsten_Disulfide__TE_507357313954_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_CHARMM_GUI_INTERFACE_Ytterbium__TE_098654223594_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_PCFF_INTERFACE_Alpha_Cristobalite__TE_956746767764_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_PCFF_INTERFACE_Alpha_Quartz__TE_494593576827_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_PCFF_INTERFACE_Aluminum__TE_741008777397_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_PCFF_INTERFACE_Copper__TE_217597096512_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_PCFF_INTERFACE_Gold__TE_018048185561_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_PCFF_INTERFACE_Kaolinite__TE_313060772354_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_PCFF_INTERFACE_Lead__TE_935633991872_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_PCFF_INTERFACE_Montmorillonite__TE_317102643046_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_PCFF_INTERFACE_Nickel__TE_780511124020_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_PCFF_INTERFACE_Palladium__TE_743067765159_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_PCFF_INTERFACE_Platinum__TE_827537199504_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_PCFF_INTERFACE_Pyrophyllite__TE_060007452167_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_PCFF_INTERFACE_Silver__TE_314538851176_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_PCFF_INTERFACE_Tobermorite__TE_068767742876_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_PCFF_INTERFACE_Tricalcium_Aluminate__TE_386531012571_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_PCFF_INTERFACE_Tricalcium_Silicate__TE_036658485235_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_core_shell_AB2_cF12_225_a_c_CaF__TE_185882332954_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_core_shell_AB2_cP12_205_a_c_MgO__TE_068755949348_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_core_shell_AB2_hR3_166_a_c_CaF__TE_602903071008_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_core_shell_AB2_oP12_62_c_2c_CaF__TE_372718531987_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_core_shell_AB2_oP6_26_a_ab_CaF__TE_090943626130_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_core_shell_AB2_tP3_123_a_e_CaF__TE_626869503943_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_core_shell_AB_cF8_225_a_b_ClNa__TE_102563389665_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_core_shell_AB_cF8_225_a_b_MgO__TE_816421242166_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_core_shell_AB_cP12_223_c_d_MgO__TE_312580027644_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_core_shell_AB_cP2_221_a_b_ClNa__TE_887131284947_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_core_shell_AB_hP24_192_l_l_MgO__TE_340085167281_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_core_shell_AB_hP24_194_ab2f_e2f_MgO__TE_434184180552_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_core_shell_AB_hP2_187_a_d_MgO__TE_069188318101_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_core_shell_AB_hP4_186_b_b_MgO__TE_647349572898_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_core_shell_AB_hP4_194_c_d_MgO__TE_140848426356_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_core_shell_AB_hR16_166_ab3c_4c_MgO__TE_050458331662_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_core_shell_AB_mC48_15_3f_3f_MgO__TE_602605063148_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_core_shell_AB_mC48_8_12a_12a_MgO__TE_631244022605_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_core_shell_AB_oI32_72_2j_2j_MgO__TE_486018722972_000
EquilibriumCrystalStructure_Unconstrained_TypeLabels_core_shell_AB_oI48_72_3j_3j_MgO__TE_006933107939_000

LICENSE
Makefile
README.md
Tests/CHARMM-GUI/Actinium/input0.dat
Tests/CHARMM-GUI/Alpha-Cristobalite/input0.dat
Tests/CHARMM-GUI/Alpha-Quartz/input0.dat
Tests/CHARMM-GUI/Aluminum-Oxide/input0.dat
Tests/CHARMM-GUI/Aluminum/input0.dat
Tests/CHARMM-GUI/Anhydrite/input0.dat
Tests/CHARMM-GUI/Calcium-Hydroxide/input0.dat
Tests/CHARMM-GUI/Calcium-Oxide/input0.dat
Tests/CHARMM-GUI/Calcium/input0.dat
Tests/CHARMM-GUI/Cerium/input0.dat
Tests/CHARMM-GUI/Chromium-Oxide/input0.dat
Tests/CHARMM-GUI/Copper/input0.dat
Tests/CHARMM-GUI/Einsteinium/input0.dat
Tests/CHARMM-GUI/Gold/input0.dat
Tests/CHARMM-GUI/Graphite/input0.dat
Tests/CHARMM-GUI/Gypsum/input0.dat
Tests/CHARMM-GUI/Hemihydrate/input0.dat
Tests/CHARMM-GUI/Iridium/input0.dat
Tests/CHARMM-GUI/Iron-Oxide/input0.dat
Tests/CHARMM-GUI/Iron/input0.dat
Tests/CHARMM-GUI/Kaolinite/input0.dat
Tests/CHARMM-GUI/Lead/input0.dat
Tests/CHARMM-GUI/Lithium-Cobalt-Oxide/input0.dat
Tests/CHARMM-GUI/Magnesium-Hydroxide/input0.dat
Tests/CHARMM-GUI/Magnesium-Oxide/input0.dat
Tests/CHARMM-GUI/Molybdenum-Disulfide/input0.dat
Tests/CHARMM-GUI/Montmorillonite/input0.dat
Tests/CHARMM-GUI/Muscovite/input0.dat
Tests/CHARMM-GUI/Nickel-Hydroxide/input0.dat
Tests/CHARMM-GUI/Nickel-Oxide/input0.dat
Tests/CHARMM-GUI/Nickel/input0.dat
Tests/CHARMM-GUI/Palladium/input0.dat
Tests/CHARMM-GUI/Platinum/input0.dat
Tests/CHARMM-GUI/Pyrophyllite/input0.dat
Tests/CHARMM-GUI/Rhodium/input0.dat
Tests/CHARMM-GUI/Silver/input0.dat
Tests/CHARMM-GUI/Strontium/input0.dat
Tests/CHARMM-GUI/Thorium/input0.dat
Tests/CHARMM-GUI/Tobemorite/input0.dat
Tests/CHARMM-GUI/Tricalcium-Aluminate/input0.dat
Tests/CHARMM-GUI/Tricalcium-Silicate/input0.dat
Tests/CHARMM-GUI/Tungsten-Disulfide/input0.dat
Tests/CHARMM-GUI/Ytterbium/input0.dat
Tests/PCFF-IFF/Alpha-Cristobalite/input0.dat
Tests/PCFF-IFF/Alpha-Quartz/input0.dat
Tests/PCFF-IFF/Aluminum/input0.dat
Tests/PCFF-IFF/Copper/input0.dat
Tests/PCFF-IFF/Gold/input0.dat
Tests/PCFF-IFF/Kaolinite/input0.dat
Tests/PCFF-IFF/Lead/input0.dat
Tests/PCFF-IFF/Montmorillonite/input0.dat
Tests/PCFF-IFF/Nickel/input0.dat
Tests/PCFF-IFF/Palladium/input0.dat
Tests/PCFF-IFF/Platinum/input0.dat
Tests/PCFF-IFF/Pyrophyllite/input0.dat
Tests/PCFF-IFF/Silver/input0.dat
Tests/PCFF-IFF/Tobemorite/input0.dat
Tests/PCFF-IFF/Tricalcium-Aluminate/input0.dat
Tests/PCFF-IFF/Tricalcium-Silicate/input0.dat
Tests/coreshell/AB2_cF12_225_a_c_Ca_F/input0.dat
Tests/coreshell/AB2_cP12_205_a_c_Mg_O/input0.dat
Tests/coreshell/AB2_hR3_166_a_c_Ca_F/input0.dat
Tests/coreshell/AB2_oP12_62_c_2c_Ca_F/input0.dat
Tests/coreshell/AB2_oP6_26_a_ab_Ca_F/input0.dat
Tests/coreshell/AB2_tP3_123_a_e_Ca_F/input0.dat
Tests/coreshell/AB_cF8_225_a_b_Cl_Na/input0.dat
Tests/coreshell/AB_cF8_225_a_b_Mg_O/input0.dat
Tests/coreshell/AB_cP12_223_c_d_Mg_O/input0.dat
Tests/coreshell/AB_cP2_221_a_b_Cl_Na/input0.dat
Tests/coreshell/AB_hP24_192_l_l_Mg_O/input0.dat
Tests/coreshell/AB_hP24_194_ab2f_e2f_Mg_O/input0.dat
Tests/coreshell/AB_hP2_187_a_d_Mg_O/input0.dat
Tests/coreshell/AB_hP4_186_b_b_Mg_O/input0.dat
Tests/coreshell/AB_hP4_194_c_d_Mg_O/input0.dat
Tests/coreshell/AB_hR16_166_ab3c_4c_Mg_O/input0.dat
Tests/coreshell/AB_mC48_15_3f_3f_Mg_O/input0.dat
Tests/coreshell/AB_mC48_8_12a_12a_Mg_O/input0.dat
Tests/coreshell/AB_oI32_72_2j_2j_Mg_O/input0.dat
Tests/coreshell/AB_oI48_72_3j_3j_Mg_O/input0.dat
bonded_util/README.md
bonded_util/__init__.py
bonded_util/bonded_util.py
bonded_util/charmm_gui_test_from_nmm.py
bonded_util/create_tests.sh
bonded_util/cs_test_from_reactive_test.py
bonded_util/lmp_typelabel_dat_from_charmm_gui/MK_read/main.py
bonded_util/lmp_typelabel_dat_from_charmm_gui/MK_read/read_LAMMPS_data.py
bonded_util/lmp_typelabel_dat_from_charmm_gui/MK_read/write_LAMMPS_data.py
bonded_util/lmp_typelabel_dat_from_charmm_gui/README.md
bonded_util/lmp_typelabel_dat_from_charmm_gui/__init__.py
bonded_util/lmp_typelabel_dat_from_charmm_gui/convert.py
bonded_util/pcff_iff_test_from_nmm_test.py
bonded_util/symfiles/charmm-gui/sym.txt
bonded_util/symfiles/cs/sym.txt
bonded_util/symfiles/pcff/sym.txt
bonded_util/test_sources/coreshell/test_generator_CaF.json
bonded_util/test_sources/coreshell/test_generator_ClNa.json
bonded_util/test_sources/coreshell/test_generator_MgO.json
in.lammps
kimprovenance.edn
kimspec.edn
runner
test_generator.json
test_template/LICENSE
test_template/Makefile
test_template/kimspec.edn.genie
test_template/pipeline.stdin.tpl.genie
test_template/requirements.txt
test_template/runner

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