Citations
This panel presents information regarding the papers that have cited the interatomic potential (IP) whose page you are on.
The OpenKIM machine learning based Deep Citation framework is used to determine whether the citing article actually used the IP in computations (denoted by "USED") or only provides it as a background citation (denoted by "NOT USED"). For more details on Deep Citation and how to work with this panel, click the documentation link at the top of the panel.
The word cloud to the right is generated from the abstracts of IP principle source(s) (given below in "How to Cite") and the citing articles that were determined to have used the IP in order to provide users with a quick sense of the types of physical phenomena to which this IP is applied.
The bar chart shows the number of articles that cited the IP per year. Each bar is divided into green (articles that USED the IP) and blue (articles that did NOT USE the IP).
Users are encouraged to correct Deep Citation errors in determination by clicking the speech icon next to a citing article and providing updated information. This will be integrated into the next Deep Citation learning cycle, which occurs on a regular basis.
OpenKIM acknowledges the support of the Allen Institute for AI through the Semantic Scholar project for providing citation information and full text of articles when available, which are used to train the Deep Citation ML algorithm.
|
This panel provides information on past usage of this interatomic potential (IP) powered by the OpenKIM Deep Citation framework. The word cloud indicates typical applications of the potential. The bar chart shows citations per year of this IP (bars are divided into articles that used the IP (green) and those that did not (blue)). The complete list of articles that cited this IP is provided below along with the Deep Citation determination on usage. See the Deep Citation documentation for more information.
3252 Citations (1405 used)
Help us to determine which of the papers that cite this potential actually used it to perform calculations. If you know, click the .
USED (high confidence) D. Li, T. Li, Z. Mao, Y. Zhang, and B. Wang, “Heat transfer mechanism in graphene reinforced PEEK nanocomposites,” RSC Advances. 2023. link Times cited: 0 Abstract: The thermal conductivity of graphene is in the range of 3000… read moreAbstract: The thermal conductivity of graphene is in the range of 3000–5000 W m−1 K−1, showing great potential in high thermal conductivity devices. However, the thermal conductivity of graphene-reinforced polymer is typically lower than 10 W m−1 K−1, which is far from theoretical expectations. To understand the mechanisms of heat transfer in graphene-reinforced polymers, this work investigated the effect of graphene addition on the thermal conductive performance of polyetheretherketone (PEEK) matrix. The study examined the number of layers, deflection angles, and interlayer distances using molecular dynamics (MD) simulations. The results showed that the improvement of thermal conductivity of PEEK nanocomposite was not only related to the content of graphene but also to the angle between the benzene ring in the molecular chain of PEEK and the transfer direction of heat flow. Increasing the number of graphene layers is more beneficial to the enhancement of thermal conductivity. In particular, the enhancement of thermal conductivity is most significant when the number of graphene layers is the same, and the interlayer distance is less than the truncation radius. read less USED (high confidence) A. Singh and Y. Li, “Reliable machine learning potentials based on artificial neural network for graphene,” ArXiv. 2023. link Times cited: 0 USED (high confidence) P. Polyakova, L. Galiakhmetova, R. Murzaev, D. Lisovenko, and J. Baimova, “Elastic properties of diamane,” Letters on Materials. 2023. link Times cited: 0 USED (high confidence) D. T. Ho, T. Nguyen, A. Jangir, and U. Schwingenschlögl, “Graphene foam membranes with tunable pore size for next-generation reverse osmosis water desalination.,” Nanoscale horizons. 2023. link Times cited: 1 Abstract: The development of carbon-based reverse osmosis membranes fo… read moreAbstract: The development of carbon-based reverse osmosis membranes for water desalination is hindered by challenges in achieving a high pore density and controlling the pore size. We use molecular dynamics simulations to demonstrate that graphene foam membranes with a high pore density provide the possibility to tune the pore size by applying mechanical strain. As the pore size is found to be effectively reduced by a structural transformation under strain, graphene foam membranes are able to combine perfect salt rejection with unprecedented water permeability. read less USED (high confidence) W. Xiong, W. Zhou, P. Sun, and S. Yuan, “Enhanced hydrogen-gas permeation through rippled graphene,” Physical Review B. 2023. link Times cited: 1 Abstract: The penetration of atomic hydrogen through defect-free graph… read moreAbstract: The penetration of atomic hydrogen through defect-free graphene was generally predicted to have a barrier of at least several eV, which is much higher than the 1 eV barrier measured for hydrogen-gas permeation through pristine graphene membranes. Herein, our density functional theory calculations show that ripples, which are ubiquitous in atomically thin crystals and mostly overlooked in the previous simulations, can significantly reduce the barriers for all steps constituting the mechanism of hydrogen-gas permeation through graphene membranes, including dissociation of hydrogen molecules, reconstruction of the dissociated hydrogen atoms and their flipping across graphene. Especially, the flipping barrier of hydrogen atoms from a cluster configuration is found to decrease rapidly down to<1 eV with increasing ripples' curvature. The estimated hydrogen permeation rates by fully considering the distribution of ripples with all realistic curvatures and the major reaction steps that occurred on them are quite close to the experimental measurements. Our work provides insights into the fundamental understanding of hydrogen-gas permeation through graphene membranes and emphasizes the importance of nanoscale non-flatness (ripples) in explaining many surface and transport phenomena (for example, functionalization, corrosion and separation) in graphene and other two-dimensional materials. read less USED (high confidence) W. H. Oo, M. Baykara, and H. Gao, “A Computational Study of Cluster Dynamics in Structural Lubricity: Role of Cluster Rotation,” Tribology Letters. 2023. link Times cited: 0 USED (high confidence) C. Xu, Z. Ye, and P. Egberts, “Friction hysteretic behavior of supported atomically thin nanofilms,” npj 2D Materials and Applications. 2023. link Times cited: 6 USED (high confidence) R. B. de Oliveira, D. D. Borges, and L. D. Machado, “Mechanical and gas adsorption properties of graphene and graphynes under biaxial strain,” Scientific Reports. 2022. link Times cited: 2 USED (high confidence) V. H. Lam, H. G. Nguyen, V. H. Nguyen, M. P. Nguyen, and T.-T.-Y. Tran, “In Silico Study of the Influences of Cooling Rates on the Phase Transition of Water Inside the Carbon Nanotube under Different Ambient Pressures,” Communications in Physics. 2022. link Times cited: 0 Abstract: By using MD simulation method, this study shows the influenc… read moreAbstract: By using MD simulation method, this study shows the influences of cooling rates on the solidifying temperature of water inside a single-wall-carbon-nanotube under different ambient pressures when cooling the systems from 300 K down to 200 K. Our results showed that the more rapid cooling rate of the systems creates more disruptive and dramatic phase transitions. Moreover, we also found that the lower of pressures correlates to the more dramatic phase transitions of water, regardless of cooling rate. This study generally provides more insight into water behavior in the SWCNT with variations in ambient conditions. read less USED (high confidence) M. Rérat, J. Rayez, B. Fábián, M. Devel, and S. Picaud, “A CRYSTAL-based parameterization of carbon atom dynamic polarizabilities to compute optical properties of curved carbonaceous nanostructures,” Theoretical Chemistry Accounts. 2022. link Times cited: 0 USED (high confidence) Y. Sun, K. Zhou, R. Wang, Z. Zhang, C. Tang, and W. Guo, “Formation of One-Dimensional van der Waals Heterostructures via Self-Assembly of Blue Phosphorene Nanoribbons to Carbon Nanotubes,” Acta Mechanica Solida Sinica. 2022. link Times cited: 1 USED (high confidence) Z. Yang and M. Buehler, “Linking atomic structural defects to mesoscale properties in crystalline solids using graph neural networks,” npj Computational Materials. 2022. link Times cited: 11 USED (high confidence) J. Bian and L. Nicola, “Oscillation of a graphene flake on an undulated substrate with amplitude gradient,” Computational Materials Science. 2022. link Times cited: 0 USED (high confidence) Z. Yang and M. Buehler, “High‐Throughput Generation of 3D Graphene Metamaterials and Property Quantification Using Machine Learning,” Small Methods. 2022. link Times cited: 8 Abstract: 3D graphene assemblies are proposed as solutions to meet the… read moreAbstract: 3D graphene assemblies are proposed as solutions to meet the goal toward efficient utilization of 2D graphene sheets, showing excellent performances in applications such as mechanical support, energy storage, and electrochemical catalysis. However, given the diversity and complexity of possible graphene 3D structures, there does not yet exist a systematic approach that can generate target 3D shapes and also, evaluate their performance. Here high‐throughput data generation is combined with artificial intelligence approaches to realize rapid structure formation and property quantification of 3D graphene foams with mathematically controlled topologies, driven by molecular dynamics simulations. More than 4000 different foam structures are created, which feature diverse topologies that contain potential pathways for small molecules and auxetic structures with negative Poisson's ratio. Empowered by machine learning (ML) algorithms including graph neural networks, not only global properties such as elastic moduli, but also local behaviors such as atomic stress can be predicted and optimized based on their atomic structure, bypassing expensive atomistic simulations. The key findings of the research reported in this paper include a high‐throughput virtual framework of generating diverse 3D graphene assemblies with mechanical performances quantification, and highly efficient methods of evaluating physical properties based on ML. read less USED (high confidence) J.-M. Leyssale, G. Couégnat, S. Jouannigot, and G. Vignoles, “Mechanisms of elastic softening in highly anisotropic carbons under in-plane compression/indentation,” Carbon. 2022. link Times cited: 3 USED (high confidence) J. Liu et al., “Interlayer shear coupling in bilayer graphene,” npj 2D Materials and Applications. 2022. link Times cited: 4 USED (high confidence) M. Z. Dehaghani et al., “Heat transfer through hydrogenated graphene superlattice nanoribbons: a computational study,” Scientific Reports. 2022. link Times cited: 7 USED (high confidence) H. Tafrishi, S. Sadeghzadeh, and R. Ahmadi, “Molecular dynamics simulations of phase change materials for thermal energy storage: a review,” RSC Advances. 2022. link Times cited: 9 Abstract: Phase change materials (PCM) have had a significant role as … read moreAbstract: Phase change materials (PCM) have had a significant role as thermal energy transfer fluids and nanofluids and as media for thermal energy storage. Molecular dynamics (MD) simulations, can play a significant role in addressing several thermo-physical problems of PCMs at the atomic scale by providing profound insights and new information. In this paper, the reviewed research is classified into five groups: pure PCM, mixed PCM, PCM containing nanofillers, nano encapsulated PCM, and PCM in nanoporous media. A summary of the equilibrium and non-equilibrium MD simulations of PCMs and their results is presented as well. The primary results of the simulated systems are demonstrated to be efficient in manufacturing phase change materials with better thermal energy storage features. The goals of these studies are to achieve higher thermal conductivity, higher thermal capacity, and lower density change, determine the melting point, and understand the molecular behaviors of PCM composites. A molecular dynamics-based grouping (PCM simulation table) was presented that is very useful for the future roadmap of PCM simulation. In the end, the PCFF force field is presented in detail and a case problem is studied for more clarity. The results show that simulating the PCMs with a similar strategy could be performed systematically. Results of investigations of thermal conductivity enhancement showed that this characteristic can be increased at the nano-scale by the orientation of PCM molecules. read less USED (high confidence) W. Sun, T. Zhang, J. Jiang, and P. Chen, “Dynamic penetration behaviors of single/multi-layer graphene using nanoprojectile under hypervelocity impact,” Scientific Reports. 2022. link Times cited: 5 USED (high confidence) H. Gao and M. Müser, “Structural lubricity of physisorbed gold clusters on graphite and its breakdown: Role of boundary conditions and contact lines,” Frontiers in Chemistry. 2022. link Times cited: 1 Abstract: The sliding motion of gold slabs adsorbed on a graphite subs… read moreAbstract: The sliding motion of gold slabs adsorbed on a graphite substrate is simulated using molecular dynamics. The central quantity of interest is the mean lateral force, that is, the kinetic friction rather than the maximum lateral forces, which correlates with the static friction. For most setups, we find Stokesian damping to resist sliding. However, velocity-insensitive (Coulomb) friction is observed for finite-width slabs sliding parallel to the armchair direction if the bottom-most layer of the three graphite layers is kept at zero stress rather than at zero displacement. Although the resulting kinetic friction remains much below the noise produced by the erratic fluctuations of (conservative) forces typical for structurally lubric contacts, the nature of the instabilities leading to Coulomb friction could be characterized as quasi-discontinuous dynamics of the Moiré patterns formed by the normal displacements near a propagating contact line. It appears that the interaction of graphite with the second gold layer is responsible for the symmetry break occurring at the interface when a contact line moves parallel to the armchair rather than to the zigzag direction. read less USED (high confidence) Y. Zhang, Y. Qiu, F. Niu, and A. Ademiloye, “Molecular Dynamics Simulation of Perforation of Graphene Under Impact by Fullerene Projectiles,” SSRN Electronic Journal. 2022. link Times cited: 3 USED (high confidence) Y. Zeng et al., “Thermoelectric Conversion From Interface Thermophoresis and Piezoelectric Effects,” Frontiers of Physics. 2022. link Times cited: 1 Abstract: Piezoelectric effect has proved itself to be a promising ene… read moreAbstract: Piezoelectric effect has proved itself to be a promising energy conversion mechanism that can convert mechanical energy into electricity. Here, we propose an indirect thermoelectric conversion mechanism based on a combination of the thermophoresis and piezoelectric effects. We first analyze this thermally driven mechanism using a simplified theoretical model and then numerically analyze a molecular dynamics (MD) simulation of a hybrid system constructed of a single-layer MoS2 nanoribbon and a concentric carbon nanotube. We show that the thermophoresis-induced piezoelectric output voltage can reach 3.5 V, and this value can be tuned using a temperature difference. The output voltage obtained using this mechanism is significantly higher than that obtained by heating piezoelectric materials directly. Given the generality of the thermophoresis effect in Van der Waals structures, this mechanism has potential applications in the conversion of thermal energy into electrical energy at the nanoscale level. read less USED (high confidence) J. Wang, F. Fang, and L. Li, “Cutting of Graphite at Atomic and Close-to-Atomic Scale Using Flexible Enhanced Molecular Dynamics,” Nanomanufacturing and Metrology. 2022. link Times cited: 6 USED (high confidence) J. Wu, E. Zhou, Z. Qin, X. Zhang, and G. Qin, “Accessing negative Poisson’s ratio of graphene by machine learning interatomic potentials,” Nanotechnology. 2022. link Times cited: 2 Abstract: The negative Poisson’s ratio (NPR) is a novel property of ma… read moreAbstract: The negative Poisson’s ratio (NPR) is a novel property of materials, which enhances the mechanical feature and creates a wide range of application prospects in lots of fields, such as aerospace, electronics, medicine, etc. Fundamental understanding on the mechanism underlying NPR plays an important role in designing advanced mechanical functional materials. However, with different methods used, the origin of NPR is found different and conflicting with each other, for instance, in the representative graphene. In this study, based on machine learning technique, we constructed a moment tensor potential for molecular dynamics (MD) simulations of graphene. By analyzing the evolution of key geometries, the increase of bond angle is found to be responsible for the NPR of graphene instead of bond length. The results on the origin of NPR are well consistent with the start-of-art first-principles, which amend the results from MD simulations using classic empirical potentials. Our study facilitates the understanding on the origin of NPR of graphene and paves the way to improve the accuracy of MD simulations being comparable to first-principle calculations. Our study would also promote the applications of machine learning interatomic potentials in multiscale simulations of functional materials. read less USED (high confidence) A. Wei, H. Ye, Z. Guo, and J. Xiong, “SISSO-assisted prediction and design of mechanical properties of porous graphene with a uniform nanopore array,” Nanoscale Advances. 2022. link Times cited: 1 Abstract: Mechanical properties of porous graphene can be effectively … read moreAbstract: Mechanical properties of porous graphene can be effectively tuned by tailoring the nanopore arrangement. Knowledge of the relationship between the porous structure and overall mechanical properties is thus essential for the wide potential applications, and the existing challenge is to efficiently predict and design the mechanical properties of porous graphene due to the diverse nanopore arrangements. In this work, we report on how the SISSO (Sure Independence Screening and Sparsifying Operator) algorithm can be applied to build a bridge between the mechanical properties of porous graphene and the uniform nanopore array. We first construct a database using the strength and work of fracture calculated by large-scale molecular dynamics simulations. Then the SISSO algorithm is adopted to train a predictive model and automatically derive the optimal fitting formulae which explicitly describe the nonlinear structure–property relationships. These expressions not only enable the direct and accurate prediction of targeted properties, but also serve as a convenient and portable tool for inverse design of the porous structure. Compared with other forecasting methods including several popular machine learning algorithms, the SISSO algorithm shows its advantages in both accuracy and convenience. read less USED (high confidence) J. Lin et al., “Colossal and reversible barocaloric effect in liquid-solid-transition materials n-alkanes,” Nature Communications. 2022. link Times cited: 19 USED (high confidence) J. Lin et al., “Colossal and reversible barocaloric effect in liquid-solid-transition materials n-alkanes,” Nature Communications. 2022. link Times cited: 0 USED (high confidence) X. Shi, X. He, L. Sun, and X. Liu, “Influence of Defect Number, Distribution Continuity and Orientation on Tensile Strengths of the CNT-Based Networks: A Molecular Dynamics Study,” Nanoscale Research Letters. 2022. link Times cited: 2 USED (high confidence) B. Karasulu, J.-M. Leyssale, P. Rowe, C. R. Weber, and C. de Tomas, “Accelerating the prediction of large carbon clusters via structure search: Evaluation of machine-learning and classical potentials,” Carbon. 2022. link Times cited: 11 USED (high confidence) S. Nakarmi, V. Unnikrishnan, V. Varshney, and A. Roy, “Multi-Terminal Nanotube Junctions: Modeling and Structure-Property Relationship,” Frontiers in Materials. 2021. link Times cited: 1 Abstract: Carbon nanotube based multi-terminal junction configurations… read moreAbstract: Carbon nanotube based multi-terminal junction configurations are of great interest because of the potential aerospace and electronic applications. Multi-terminal carbon nanotube junction has more than one carbon nanotube meeting at a point to create a 2D or 3D structure. Accurate atomistic models of such junctions are essential for characterizing their thermal, mechanical and electronic properties via computational studies. In this work, computational methodologies that uses innovative Computer-Aided Design (CAD) based optimization strategies and remeshing techniques are presented for generating such topologically reliable and accurate models of complex multi-terminal junctions (called 3-, 4-, and 6-junctions). This is followed by the prediction of structure-property relationship via study of thermal conductivity and mechanical strength using molecular dynamics simulations. We observed high degradation in the thermal and mechanical properties of the junctions compared to pristine structures which is attributed to high concentration of non-hexagonal defects in the junction. Junctions with fewer defects have better thermal transport capabilities and higher mechanical strengths, suggesting that controlling the number of defects can significantly improve inherent features of the nanostructures. read less USED (high confidence) R. Izadi, M. Tuna, P. Trovalusci, and N. Fantuzzi, “Bending characteristics of carbon nanotubes: Micropolar elasticity models and molecular dynamics simulations,” Mechanics of Advanced Materials and Structures. 2021. link Times cited: 7 Abstract: The present paper aims at evaluating non-classical continuum… read moreAbstract: The present paper aims at evaluating non-classical continuum parameters for each class of armchair and zigzag single-walled CNTs focusing on the scale effect in their flexural behavior observed in molecular dynamics (MD) simulations. Through a non-linear optimization approach, the bending rigidities obtained from atomistic simulations are compared to those derived from non-classical continua. For MD simulations, a novel method ensuring pure bending is introduced and for continuum modeling, micropolar, constrained micropolar, and modified couple stress theories are employed. The results reveal that adopted non-classical theories, notably micropolar theory, provide reasonable outcomes with an obvious failure of classical Cauchy theory. read less USED (high confidence) Z. Luo, S. A. Burrows, X. Fan, S. Smoukov, and E. Boek, “Virtual voids method to generate low-density microporous carbon structures using quenched molecular dynamics simulation,” Carbon. 2021. link Times cited: 1 USED (high confidence) W. Yong and Y. Zhou, “A Molecular Dynamics Investigation on Methane Flow and Water Droplets Sliding in Organic Shale Pores with Nano-structured Roughness,” Transport in Porous Media. 2021. link Times cited: 8 USED (high confidence) Y. Tanuma, T. Maekawa, and C. Ewels, “Methodological Investigation for Hydrogen Addition to Small Cage Carbon Fullerenes,” Crystals. 2021. link Times cited: 2 Abstract: Hydrogenated small fullerenes (Cn, n<60) are of interest as … read moreAbstract: Hydrogenated small fullerenes (Cn, n<60) are of interest as potential astrochemical species, and as intermediates in hydrogen catalysed fullerene growth. However computational identification of key stable species is difficult due to the vast combinatorial space of structures. In this study we explore routes to predict stable hydrogenated small fullerenes. We show that neither local fullerene geometry nor local electronic structure analysis are able to correctly predict subsequent low energy hydrogenation sites, and indeed sequential stable addition searches also sometimes fail to identify most stable hydrogenated fullerene isomers. Of the empirical and semi-empirical methods tested, GFN2-xTB consistently gives highly accurate energy correlation (r>0.99) to full DFT-LDA calculations at a fraction of the computational cost. This allows identification of the most stable hydrogenated fullerenes up to 4H for four fullerenes, namely two isomers of C28 and C40, via “brute force” systematic testing of all symmetry inequivalent combinations. The approach shows promise for wider systematic studies of smaller hydrogenated fullerenes. read less USED (high confidence) A. Shiryaev, A. Trigub, E. Voronina, K. Kvashnina, and V. Bukhovets, “Behavior of implanted Xe, Kr and Ar in nanodiamonds and thin graphene stacks: experiment and modeling.,” Physical chemistry chemical physics : PCCP. 2021. link Times cited: 1 Abstract: Implantation and subsequent behaviour of heavy noble gases (… read moreAbstract: Implantation and subsequent behaviour of heavy noble gases (Ar, Kr, and Xe) in few-layer graphene sheets and in nanodiamonds are studied both using computational methods and experimentally using X-ray absorption spectroscopy. X-ray absorption spectroscopy provides substantial support for Xe-vacancy (Xe-V) defects as main sites for Xe in nanodiamonds. It is shown that noble gases in thin graphene stacks distort the layers, forming bulges. The energy of an ion placed in between flat graphene sheets is notably lower than that in domains with high curvature. However, if the ion is trapped in the curved domain, considerable additional energy is required to displace it. This phenomenon is likely responsible for strong binding of noble gases implanted into disordered carbonaceous phase in meteorites (the Q-component). read less USED (high confidence) B. Zheng, Z. Zheng, and G. X. Gu, “Scalable Graphene Defect Prediction Using Transferable Learning,” Nanomaterials. 2021. link Times cited: 3 Abstract: Notably known for its extraordinary thermal and mechanical p… read moreAbstract: Notably known for its extraordinary thermal and mechanical properties, graphene is a favorable building block in various cutting-edge technologies such as flexible electronics and supercapacitors. However, the almost inevitable existence of defects severely compromises the properties of graphene, and defect prediction is a difficult, yet important, task. Emerging machine learning approaches offer opportunities to predict target properties such as defect distribution by exploiting readily available data, without incurring much experimental cost. Most previous machine learning techniques require the size of training data and predicted material systems of interest to be identical. This limits their broader application, because in practice a newly encountered material system may have a different size compared with the previously observed ones. In this paper, we develop a transferable learning approach for graphene defect prediction, which can be used on graphene with various sizes or shapes not seen in the training data. The proposed approach employs logistic regression and utilizes data on local vibrational energy distributions of small graphene from molecular dynamics simulations, in the hopes that vibrational energy distributions can reflect local structural anomalies. The results show that our machine learning model, trained only with data on smaller graphene, can achieve up to 80% prediction accuracy of defects in larger graphene under different practical metrics. The present research sheds light on scalable graphene defect prediction and opens doors for data-driven defect detection for a broad range of two-dimensional materials. read less USED (high confidence) X. Lei, K. Bando, and J.-X. Shi, “Vibration Control of Diamond Nanothreads by Lattice Defect Introduction for Application in Nanomechanical Sensors,” Nanomaterials. 2021. link Times cited: 3 Abstract: Carbon nanomaterials, such as carbon nanotubes (CNTs) and gr… read moreAbstract: Carbon nanomaterials, such as carbon nanotubes (CNTs) and graphene sheets (GSs), have been adopted as resonators in vibration-based nanomechanical sensors because of their extremely high stiffness and small size. Diamond nanothreads (DNTs) are a new class of one-dimensional carbon nanomaterials with extraordinary physical and chemical properties. Their structures are similar to that of diamond in that they possess sp3-bonds formed by a covalent interaction between multiple benzene molecules. In this study, we focus on investigating the mechanical properties and vibration behaviors of DNTs with and without lattice defects and examine the influence of density and configuration of lattice defects on the two them in detail, using the molecular dynamics method and a continuum mechanics approach. We find that Young’s modulus and the natural frequency can be controlled by alternating the density of the lattice defects. Furthermore, we investigate and explore the use of DNTs as resonators in nanosensors. It is shown that applying an additional extremely small mass or strain to all types of DNTs significantly changes their resonance frequencies. The results show that, similar to CNTs and GSs, DNTs have potential application as resonators in nano-mass and nano-strain sensors. In particular, the vibration behaviors of DNT resonators can be controlled by alternating the density of the lattice defects to achieve the best sensitivities. read less USED (high confidence) H. Lin, J. Heinze, A. Croy, R. Guti’errez, and G. Cuniberti, “Effect of lubricants on the rotational transmission between solid-state gears,” Beilstein Journal of Nanotechnology. 2021. link Times cited: 1 Abstract: Lubricants are widely used in macroscopic mechanical systems… read moreAbstract: Lubricants are widely used in macroscopic mechanical systems to reduce friction and wear. However, on the microscopic scale, it is not clear to what extent lubricants are beneficial. Therefore, in this study, we consider two diamond solid-state gears at the nanoscale immersed in different lubricant molecules and perform classical MD simulations to investigate the rotational transmission of motion. We find that lubricants can help to synchronize the rotational transmission between gears regardless of the molecular species and the center-of-mass distance. Moreover, the influence of the angular velocity of the driving gear is investigated and shown to be related to the bond formation process between gears. read less USED (high confidence) Y. Hou et al., “Elastocapillary cleaning of twisted bilayer graphene interfaces,” Nature Communications. 2021. link Times cited: 17 USED (high confidence) V. Vardanyan and H. Urbassek, “Morphology of graphene flakes in Ni-graphene nanocomposites and its influence on hardness: An atomistic study,” Carbon. 2021. link Times cited: 3 USED (high confidence) J. S. Shim, G. H. Lee, C. Cui, and H. Beom, “Mechanical Behaviors of Si/CNT Core/Shell Nanocomposites under Tension: A Molecular Dynamics Analysis,” Nanomaterials. 2021. link Times cited: 3 Abstract: The silicon/carbon nanotube (core/shell) nanocomposite elect… read moreAbstract: The silicon/carbon nanotube (core/shell) nanocomposite electrode model is one of the most promising solutions to the problem of electrode pulverization in lithium-ion batteries. The purpose of this study is to analyze the mechanical behaviors of silicon/carbon nanotube nanocomposites via molecular dynamics computations. Fracture behaviors of the silicon/carbon nanotube nanocomposites subjected to tension were compared with those of pure silicon nanowires. Effective Young’s modulus values of the silicon/carbon nanotube nanocomposites were obtained from the stress and strain responses and compared with the asymptotic solution of continuum mechanics. The size effect on the failure behaviors of the silicon/carbon nanotube nanocomposites with a fixed longitudinal aspect ratio was further explored, where the carbon nanotube shell was found to influence the brittle-to-ductile transition behavior of silicon nanowires. We show that the mechanical reliability of brittle silicon nanowires can be significantly improved by encapsulating them with carbon nanotubes because the carbon nanotube shell demonstrates high load-bearing capacity under tension. read less USED (high confidence) X. Xiao, S. Fan, C. Li, and Y. Liu, “Optical-Thermally Excited Graphene Resonant Mass Detection: A Molecular Dynamics Analysis,” Nanomaterials. 2021. link Times cited: 2 Abstract: In consideration of the presented optical-thermally excited … read moreAbstract: In consideration of the presented optical-thermally excited resonant mass detection scheme, molecular dynamics calculations are performed to investigate the thermal actuation and resonant mass sensing mechanism. The simulation results indicate that an extremely high temperature exists in a 6% central area of the graphene sheet exposed to the exciting laser. Therefore, constraining the laser driving power and enlarging the laser spot radius are essential to weaken the overheating in the middle of the graphene sheet, thus avoiding being burned through. Moreover, molecular dynamics calculations demonstrate a mass sensitivity of 214 kHz/zg for the graphene resonator with a pre-stress of 1 GPa. However, the adsorbed mass would degrade the resonant quality factor from 236 to 193. In comparison, the sensitivity and quality factor could rise by 1.3 and 4 times, respectively, for the graphene sheet with a pre-stress of 5 GPa, thus revealing the availability of enlarging pre-stress for better mass sensing performance. read less USED (high confidence) W.-J. Chen and I. Chang, “A Thermal Transport Study of Branched Carbon Nanotubes with Cross and T-Junctions,” Applied Sciences. 2021. link Times cited: 2 Abstract: This study investigated the thermal transport behaviors of b… read moreAbstract: This study investigated the thermal transport behaviors of branched carbon nanotubes (CNTs) with cross and T-junctions through non-equilibrium molecular dynamics (NEMD) simulations. A hot region was created at the end of one branch, whereas cold regions were created at the ends of all other branches. The effects on thermal flow due to branch length, topological defects at junctions, and temperature were studied. The NEMD simulations at room temperature indicated that heat transfer tended to move sideways rather than straight in branched CNTs with cross-junctions, despite all branches being identical in chirality and length. However, straight heat transfer was preferred in branched CNTs with T-junctions, irrespective of the atomic configuration of the junction. As branches became longer, the heat current inside approached the values obtained through conventional prediction based on diffusive thermal transport. Moreover, directional thermal transport behaviors became prominent at a low temperature (50 K), which implied that ballistic phonon transport contributed greatly to directional thermal transport. Finally, the collective atomic velocity cross-correlation spectra between branches were used to analyze phonon transport mechanisms for different junctions. Our findings deeply elucidate the thermal transport mechanisms of branched CNTs, which aid in thermal management applications. read less USED (high confidence) Y.-T. Zhang, Y.-P. Wang, X.-L. Zhang, Y. Zhang, S. Du, and S. Pantelides, “Structure of Amorphous Two-Dimensional Materials: Elemental Monolayer Amorphous Carbon versus Binary Monolayer Amorphous Boron Nitride.,” Nano letters. 2021. link Times cited: 8 Abstract: The structure of amorphous materials has been debated since … read moreAbstract: The structure of amorphous materials has been debated since the 1930s as a binary question: amorphous materials are either Zachariasen continuous random networks (Z-CRNs) or Z-CRNs containing crystallites. It was recently demonstrated, however, that amorphous diamond can be synthesized in either form. Here we address the question of the structure of single-atom-thick amorphous monolayers. We reanalyze the results of prior simulations for amorphous graphene and report kinetic Monte Carlo simulations based on alternative algorithms. We find that crystallite-containing Z-CRN is the favored structure of elemental amorphous graphene, as recently fabricated, whereas the most likely structure of binary monolayer amorphous BN is altogether different than either of the two long-debated options: it is a compositionally disordered "pseudo-CRN" comprising a mix of B-N and noncanonical B-B and N-N bonds and containing "pseudocrystallites", namely, honeycomb regions made of noncanonical hexagons. Implications for other nonelemental 2D and bulk amorphous materials are discussed. read less USED (high confidence) M. Krynski and M. Rossi, “Efficient Gaussian process regression for prediction of molecular crystals harmonic free energies,” npj Computational Materials. 2021. link Times cited: 4 USED (high confidence) Y. Qiao, Z. Shang, and R. Kou, “Molecular-sized outward-swinging gate: Experiment and theoretical analysis of a locally nonchaotic barrier.,” Physical review. E. 2021. link Times cited: 3 Abstract: We investigate the concept of molecular-sized outward-swingi… read moreAbstract: We investigate the concept of molecular-sized outward-swinging gate, which allows for entropy decrease in an isolated system. The theoretical analysis, the Monte Carlo simulation, and the direct solution of governing equations all suggest that under the condition of local nonchaoticity, the probability of particle crossing is asymmetric. It is demonstrated by an experiment on a nanoporous membrane one-sidedly surface-grafted with bendable organic chains. Remarkably, through the membrane, gas spontaneously and repeatedly flows from the low-pressure side to the high-pressure side. While this phenomenon seems counterintuitive, it is compatible with the principle of maximum entropy. The locally nonchaotic gate interrupts the probability distribution of the local microstates, and imposes additional constraints on the global microstates, so that entropy reaches a nonequilibrium maximum. Such a mechanism is fundamentally different from Maxwell's demon and Feynman's ratchet, and is consistent with microscopic reversibility. It implies that useful work may be produced in a cycle from a single thermal reservoir. A generalized form of the second law of thermodynamics is proposed. read less USED (high confidence) K. Krylova, L. Safina, R. Murzaev, J. Baimova, and R. Mulyukov, “Effect of Nanoparticle Size on the Mechanical Strength of Ni–Graphene Composites,” Materials. 2021. link Times cited: 7 Abstract: The effect of the size of nickel nanoparticles on the fabric… read moreAbstract: The effect of the size of nickel nanoparticles on the fabrication of a Ni–graphene composite by hydrostatic pressure at 0 K followed by annealing at 1000 and 2000 K is studied by molecular dynamics simulation. Crumpled graphene, consisting of crumpled graphene flakes interconnected by van der Waals forces is chosen as the matrix for the composite and filled with nickel nanoparticles composed of 21 and 47 atoms. It is found that the main factors that affect composite fabrication are nanoparticle size, the orientation of the structural units, and temperature of the fabrication process. The best stress–strain behavior is achieved for the Ni/graphene composite with Ni47 nanoparticle after annealing at 2000 K. However, all of the composites obtained had strength property anisotropy due to the inhomogeneous distribution of pores in the material volume. read less USED (high confidence) W. Xie and Y. Wei, “Roughening for Strengthening and Toughening in Monolayer Carbon Based Composites.,” Nano letters. 2021. link Times cited: 14 Abstract: Three-dimensional (3D) aggregation of graphene is dramatical… read moreAbstract: Three-dimensional (3D) aggregation of graphene is dramatically weak and brittle due primarily to the prevailing interlayer van der Waals interaction. In this report, motivated by the recent success in synthesis of monolayer amorphous carbon (MAC) sheets, we demonstrate that outstanding strength and large plastic-like strain can be achieved in layered 3D MAC composites. Both surface roughening and the ultracompliant nature of MACs count for the high strength and gradual failure in 3D MAC. Such properties are not seen when intact graphene or multiple stacked MACs are used as building blocks for 3D composites. This work demonstrates a counterintuitive mechanism that surface roughening due to initial defects and low rigidity may help to realize superb mechanical properties in 3D aggregation of monolayer carbon. read less USED (high confidence) H. Matsubara and T. Ohara, “Effect of the in-plane aspect ratio of a graphene filler on anisotropic heat conduction in paraffin/graphene composites.,” Physical chemistry chemical physics : PCCP. 2021. link Times cited: 3 Abstract: Enhancement of polymer thermal conductivity using nanographe… read moreAbstract: Enhancement of polymer thermal conductivity using nanographene fillers and clarification of its molecular-scale mechanisms are of great concern in the development of advanced thermal management materials. In the present study, molecular dynamics simulation was employed to theoretically show that the in-plane aspect ratio of a graphene filler can have a significant impact on the effective thermal conductivity of paraffin/graphene composites. Our simulation included multiple graphene fillers aggregated in a paraffin matrix. The effective thermal conductivity of a paraffin/graphene composite, described as a second-rank tensor in the framework of equilibrium molecular dynamics simulation, was calculated for two types of graphene fillers with the same surface area but in-plane aspect ratios of 1 and 10. The filler with the higher aspect ratio was found to exhibit a much higher thermal conductivity enhancement than the one with the lower aspect ratio. This is because a high in-plane aspect ratio strongly restricts the orientation of fillers when they aggregate and, consequently, highly ordered agglomerates are formed. On decomposing the effective thermal conductivity tensor into various molecular-scale contributions, it was identified that the thermal conductivity enhancement is due to the increased amount of heat transfer inside the graphene filler, particularly along the longer in-plane axis. The present result indicates a possibility of designing the heat conduction characteristics of a nanocomposite by customizing the filler shapes so as to control the aggregation structure of the fillers. read less USED (high confidence) K. Azizi, S. M. V. Allaei, A. Fathizadeh, A. Sadeghi, and M. Sahimi, “Graphyne-3: a highly efficient candidate for separation of small gas molecules from gaseous mixtures,” Scientific Reports. 2021. link Times cited: 5 USED (high confidence) S. Debroy, S. G. Acharyya, and A. Acharyya, “Effects of Orientation and Temperature on the Tensile Strength of Pristine and Defective Bi-Layer Graphene Sheet – A Molecular Dynamics Study,” Transactions of the Indian Institute of Metals. 2021. link Times cited: 1 USED (high confidence) J. Lin et al., “Colossal and Reversible Barocaloric Effect in Phase Change Materials n-Alkanes.” 2021. link Times cited: 0 Abstract:
The emergent cooling technologies based on the caloric eff… read moreAbstract:
The emergent cooling technologies based on the caloric effect provide a green alternative to the conventional vapor-compression one which brings about the serious environment problem. However, the existing caloric materials are much inferior to their traditional counterparts in cooling performance. Here we report the colossal barocaloric effect in liquid-solid-transition materials, i.e. n-alkanes. Their excellent cooling performance is superior to those for existing caloric materials and comparable to those of traditional refrigerants. Theoretical calculations suggest the liquid state n-alkanes has huge configuration entropy characterized by large dispersion of bond lengths. Appling pressure significantly reduces the configuration entropy and eventually induces the liquid-solid-transition, leading to the colossal barocaloric effect. This work provides promising refrigerants for caloric cooling technology, and opens a new avenue for exploring colossal barocaloric materials. read less USED (high confidence) L. C. Felix, R. Tromer, C. Woellner, C. Tiwary, and D. Galvão, “Mechanical response of pentadiamond: A DFT and molecular dynamics study,” Physica B: Condensed Matter. 2021. link Times cited: 6 USED (high confidence) Y.-tao Zhao, G.-hua Xie, J. Zhao, C. Wang, and C. Tang, “Modifying mechanical properties of silicon dioxide using porous graphene: molecular dynamics simulations,” Materials Research Express. 2021. link Times cited: 2 Abstract: Graphene or other 2D materials are often used as agents to r… read moreAbstract: Graphene or other 2D materials are often used as agents to reinforce engineering structures because they possess extremely high mechanical strength and structural flexibility. This is however not cost effective and the reported enhancement is often limited although the mechanical properties of graphene is often several orders higher than cements or concretes. Defective graphene is mechanically weaker than pristine graphene but stronger than engineering structures, moreover, it is cheaper because the synthesis condition is low. In this work we perform systematic molecular dynamics simulations to evaluate the effect of porous graphene (PG), a type of defective graphene, on reinforcing mechanical properties of silicon dioxide (SiO2) which is the key components of engineering structures. Our results show that PG is mechanically weaker than pristine graphene but stronger than SiO2, therefore, with certain amount of PG encapsulation into SiO2, the mechanical properties can be improved under tensile, shear and compressive loadings, although not as significant as the effective of pristine graphene. The modification mechanism is found to depend both on the intrinsic mechanical properties of GP and the interface induced surface stress redistribution in SiO2. The effects of defect concentration, volume fraction, loading methods and interface roughness are found to be influential on the reinforcing effect. Our findings are expected to offer new strategies for rational design of low-cost but high-strength engineering composite structures. read less USED (high confidence) L. Safina, K. Krylova, R. Murzaev, J. Baimova, and R. Mulyukov, “Crumpled Graphene-Storage Media for Hydrogen and Metal Nanoclusters,” Materials. 2021. link Times cited: 7 Abstract: Understanding the structural behavior of graphene flake, whi… read moreAbstract: Understanding the structural behavior of graphene flake, which is the structural unit of bulk crumpled graphene, is of high importance, especially when it is in contact with the other types of atoms. In the present work, crumpled graphene is considered as storage media for two types of nanoclusters—nickel and hydrogen. Crumpled graphene consists of crumpled graphene flakes bonded by weak van der Waals forces and can be considered an excellent container for different atoms. Molecular dynamics simulation is used to study the behavior of the graphene flake filled with the nickel nanocluster or hydrogen molecules. The simulation results reveal that graphene flake can be considered a perfect container for metal nanocluster since graphene can easily cover it. Hydrogen molecules can be stored on graphene flake at 77 K, however, the amount of hydrogen is low. Thus, additional treatment is required to increase the amount of stored hydrogen. Remarkably, the size dependence of the structural behavior of the graphene flake filled with both nickel and hydrogen atoms is found. The size of the filling cluster should be chosen in comparison with the specific surface area of graphene flake. read less USED (high confidence) Y. Wang, J. He, N. Wan, and A. Zhang, “Auxetic behavior of a novel graphene assembly model,” Meccanica. 2021. link Times cited: 0 USED (high confidence) M. R. Vazirisereshk, S. A. Sumaiya, R. Chen, M. Baykara, and A. Martini, “Time-Dependent Electrical Contact Resistance at the Nanoscale,” Tribology Letters. 2021. link Times cited: 4 USED (high confidence) D. M. Goggin, R. Bei, R. Anderson, D. A. Gómez-Gualdrón, and J. R. Samaniuk, “Stacking of Monolayer Graphene Particles at a Water–Vapor Interface,” Journal of Physical Chemistry C. 2021. link Times cited: 6 USED (high confidence) T. Lei et al., “Carbon Deposition and Permeation on Nickel Surfaces in Operando Conditions: A Theoretical Study,” Journal of Physical Chemistry C. 2021. link Times cited: 9 Abstract: The carbon deposition and permeation on nickel surfaces were… read moreAbstract: The carbon deposition and permeation on nickel surfaces were investigated from thermodynamic and kinetic aspects by using density functional theory (DFT), ab initio atomic thermodynamics, and class... read less USED (high confidence) E. Shahini, F. Rangriz, A. K. Taheri, and M. Abdi‐Jalebi, “Optimizing Structural and Mechanical Properties of Coiled Carbon Nanotubes with NSGA-II and Reactive Molecular Dynamics Simulation,” Journal of Physical Chemistry C. 2021. link Times cited: 5 Abstract: Coiled carbon nanotubes (CCNTs) have increasingly become a v… read moreAbstract: Coiled carbon nanotubes (CCNTs) have increasingly become a vital factor in the new generation of nanodevices and energy-absorbing materials due to their outstanding properties. Here, the multiobjec... read less USED (high confidence) S. Zhang and J. Zhang, “Fatigue and its effect on the mechanical and thermal transport properties of polycrystalline graphene,” Journal of Materials Science. 2021. link Times cited: 1 USED (high confidence) J. Shi, P. Wu, X. Li, K. Cai, and Y. Zhang, “Efficiency of CNT-based rotation transmission nanosystem in water,” Nanotechnology. 2021. link Times cited: 4 Abstract: Carbon nanotubes (CNTs) have been widely used as the motor a… read moreAbstract: Carbon nanotubes (CNTs) have been widely used as the motor and rotor in a rotational transmission nanosystem (RTnS), whose function is to transfer the input rotational frequency of the motor into the output frequency of the rotor through motor-rotor interactions. A wide range of techniques has been explored to achieve a CNT-based RTnS with a stable and adjustable transmission. In this work, a CNT-based rotor is partly immersed into a water box and the associated water-rotor interaction leads to effective manipulation of the transmission efficiency of RTnS. Molecular dynamics simulations are performed on this new RTnS to investigate the dynamic response of the rotor and the local flow field near the water-rotor interface. Various parameters, including ambient temperature, tubes’ radii, and volume fractions of water in the box (V f) are examined for their effects on the rotational transmission efficiency. This study offers useful guidelines for the design of stable RTnS with controllable transmission efficiency. read less USED (high confidence) M. Goswami et al., “Comparison of water nanodroplet properties on different graphite-based substrates,” AIP Advances. 2021. link Times cited: 4 Abstract: The molecular structure and dynamics of water differ conside… read moreAbstract: The molecular structure and dynamics of water differ considerably at various interfaces. We compare the interfacial water structure–property relationship on three different carbon substrates, namely, amorphous carbon, compressed expanded natural graphite, and pure graphite by utilizing atomistic molecular dynamics simulations. The effect of different substrates on the structural and dynamical properties of water can readily be observed. The density distributions parallel and normal to the substrates show oblate droplet structures. The normal to the substrate water distribution shows a strong hydration layer at the interface that does not vary with substrates. However, the disparity in the structure and dynamics on three different substrates shows that the surface morphologies of the substrates are critical for determining nanoscale water properties. Furthermore, it is observed that the formation of an interfacial water layer or the hydration layer is a direct consequence of both water “confinement” at the nanoscale and “attraction” between water molecules and the carbon substrates. read less USED (high confidence) Z. Sun et al., “Defect, temperature, and strain effects on lattice heat conductivity of egg-tray graphene,” Modelling and Simulation in Materials Science and Engineering. 2021. link Times cited: 2 Abstract: Micro and nano devices generally have the characteristics of… read moreAbstract: Micro and nano devices generally have the characteristics of high performance and compact size, so their own heat transfer and heat dissipation problems are becoming more and more serious. Therefore, it is necessary to clarify the heat transport mechanism in the micro–nano structure by analyzing the heat transport properties of nanomaterials, and then control the thermal conductivity of nanodevices. We have investigated the lattice heat transfer of egg-tray graphene using non-equilibrium molecular dynamics simulations. Three structures (I, II and III) are studied according to the number of hexagons as 10, 16, and 56 respectively. The increases of lattice thermal conductivity with an increase of length in sub-microns implies the large mean free path of phonons in egg-tray graphene, similar as that of graphene. The large-size-limit thermal conductivity is 43, 45, and 60 W m−1 K−1 for I, II, and III respectively, much smaller than that of graphene (393 W m−1 K−1) in our model. The thermal conductivity decreases with an increase of strain, as well as temperature. The heat transfer performance of structure-II is sensitive to both phonon modes and phonon quantities in compression, while in tension it is determined only by the phonon modes. Our results may be useful in thermal conductivity engineering and heat transfer management in egg-tray graphene. read less USED (high confidence) K. Shirasu, S. Kitayama, F. Liu, G. Yamamoto, and T. Hashida, “Molecular Dynamics Simulations and Theoretical Model for Engineering Tensile Properties of Single-and Multi-Walled Carbon Nanotubes,” Nanomaterials. 2021. link Times cited: 17 Abstract: To apply carbon nanotubes (CNTs) as reinforcing agents in ne… read moreAbstract: To apply carbon nanotubes (CNTs) as reinforcing agents in next-generation composites, it is essential to improve their nominal strength. However, since it is difficult to completely remove the defects, the synthesis guideline for improving nominal strength is still unclear, i.e., the effective strength and the number of nanotube layers required to improve the nominal strength has been undermined. In this study, molecular dynamics simulations were used to elucidate the effects of vacancies on the mechanical properties of CNTs. Additionally, the relationships between the number of layers and effective and nominal strengths of CNTs were discussed theoretically. The presence of extensive vacancies provides a possible explanation for the low nominal strengths obtained in previous experimental measurements of CNTs. This study indicates that the nominal strength can be increased from the experimentally obtained values of 10 GPa to approximately 20 GPa by using six to nine nanotube layers, even if the increase in effective strength of each layer is small. This has advantages over double-walled CNTs, because the effective strength of such CNTs must be approximately 60 GPa to achieve a nominal strength of 20 GPa. read less USED (high confidence) R. Izadi, M. Tuna, P. Trovalusci, and E. Ghavanloo, “Torsional Characteristics of Carbon Nanotubes: Micropolar Elasticity Models and Molecular Dynamics Simulation,” Nanomaterials. 2021. link Times cited: 23 Abstract: Efficient application of carbon nanotubes (CNTs) in nano-dev… read moreAbstract: Efficient application of carbon nanotubes (CNTs) in nano-devices and nano-materials requires comprehensive understanding of their mechanical properties. As observations suggest size dependent behaviour, non-classical theories preserving the memory of body’s internal structure via additional material parameters offer great potential when a continuum modelling is to be preferred. In the present study, micropolar theory of elasticity is adopted due to its peculiar character allowing for incorporation of scale effects through additional kinematic descriptors and work-conjugated stress measures. An optimisation approach is presented to provide unified material parameters for two specific class of single-walled carbon nanotubes (e.g., armchair and zigzag) by minimizing the difference between the apparent shear modulus obtained from molecular dynamics (MD) simulation and micropolar beam model considering both solid and tubular cross-sections. The results clearly reveal that micropolar theory is more suitable compared to internally constraint couple stress theory, due to the essentiality of having skew-symmetric stress and strain measures, as well as to the classical local theory (Cauchy of Grade 1), which cannot accounts for scale effects. To the best of authors’ knowledge, this is the first time that unified material parameters of CNTs are derived through a combined MD-micropolar continuum theory. read less USED (high confidence) X. Xiao, S. Fan, and C. Li, “The Effect of Edge Mode on Mass Sensing for Strained Graphene Resonators,” Micromachines. 2021. link Times cited: 7 Abstract: Edge mode could disturb the ultra-subtle mass detection for … read moreAbstract: Edge mode could disturb the ultra-subtle mass detection for graphene resonators. Herein, classical molecular dynamics simulations are performed to investigate the effect of edge mode on mass sensing for a doubly clamped strained graphene resonator. Compared with the fundamental mode, the localized vibration of edge mode shows a lower frequency with a constant frequency gap of 32.6 GHz, despite the mutable inner stress ranging from 10 to 50 GPa. Furthermore, the resonant frequency of edge mode is found to be insensitive to centrally located adsorbed mass, while the frequency of the fundamental mode decreases linearly with increasing adsorbates. Thus, a mass determination method using the difference of these two modes is proposed to reduce interferences for robust mass measurement. Moreover, molecular dynamics simulations demonstrate that a stronger prestress or a higher width–length ratio of about 0.8 could increase the low-quality factor induced by edge mode, thus improving the performance in mass sensing for graphene resonators. read less USED (high confidence) S. Dong, J. Liu, Z. Zhang, Y. Li, R. Huang, and J. Zhao, “Stabilities and catapults of truncated carbon nanocones,” Nanotechnology. 2021. link Times cited: 2 Abstract: Truncated carbon nanocones (CNCs) can be taken as energy sup… read moreAbstract: Truncated carbon nanocones (CNCs) can be taken as energy suppliers because of their special structures. In this paper, we demonstrate the stability of truncated CNCs under compression and the escape behavior of a fullerene catapulted from a compressed CNC by molecular dynamics simulations and theoretical models. The strain energy of a CNC and cohesive energy between a fullerene and the CNC (due to their van der Waals interactions) dominate the stability and catapulting capability of the cone, which strongly depend on geometrical parameters (apex angle, top radius and height) of each CNC and axial distances between them. In particular, the additional transverse vibration of buckled CNCs after released plays a significant role in their catapulting abilities and efficiencies. Finally, finite element method and experiments are further performed to validate the escape mechanism. This study should be of great importance to providing a theoretical support for designing novel nanodevices in mico/nanoelectromechanical systems. read less USED (high confidence) Y. Yang, Z. Zhang, Z. Hu, E. Penev, and B. Yakobson, “Energetics of graphene origami and their ‘spatial resolution,’” MRS Bulletin. 2021. link Times cited: 1 Abstract: The extreme thinness of graphene combined with its tensile s… read moreAbstract: The extreme thinness of graphene combined with its tensile strength made it a material appealing for discussing and even making complex cut-kirigami or folded-only origami. In the case of origami, its stability is mainly defined by the positive energy of the single- or double-fold curvature deformation counterbalanced by the energy reduction due to favorable van der Waals contacts. These opposite sign contributions also have notably different scaling with the size L of the construction, the contacts contributing in proportion to area ~ L2, single folds as ~ L, and highly strained double-fold corners as only ~ L0 = const. Computational analysis with realistic atomistic-elastic representation of graphene allows one to quantify these energy contributions and to establish the length scale, where a single fold is favored (7 nm < L < 21 nm) or a double fold becomes sustainable (L > 21 nm), defining the size of the smallest possible complex origami designs as L ≫ 21 nm. The flexibility and foldability of graphene are some of its attractive properties inspiring the designs of origami structures with potential use in flexible electronics and electromechanical nanodevices. The aesthetics, precision, and ease of folding and stability, however, have limitations at the nanoscale. Here, by means of large-scale atomistic calculations and continuum models, it is quantified how the dimensions determine the relative robustness of the elementary folds of graphene (a single fold and a double-folded graphene forming a single order-four vertex), thereby mapping the spatial resolution limits and providing important guidance for graphene nano-origami realizations. read less USED (high confidence) S. H. Boroushak, S. Ajori, and R. Ansari, “Thermal conductivity of perfect and defective carbon nanotubes functionalized with carbene: a molecular dynamics study,” Molecular Simulation. 2021. link Times cited: 5 Abstract: ABSTRACT Thermal transport issues are one of the major conce… read moreAbstract: ABSTRACT Thermal transport issues are one of the major concerns of scientists as the size decreases. To this end, the thermal conductivity of perfect and defective single-walled carbon nanotubes (SWCNTs) functionalized with carbene, which is an important functional group in nanodevices, is investigated. A series of molecular dynamics (MD) simulations are performed and the thermal conductivity is determined by the approach introduced by Muller-Plathe. The results demonstrate that functionalization decreases the thermal conductivity. Also, the thermal conductivity of functionalized SWCNT declines as the weight percentage of functional group increases. Additionally, it is shown that increasing the weight percentage decreases the sensitivity of thermal conductivity. According to the obtained results, simulation temperature does not affect the thermal conductivity of functionalized SWCNTs considerably compared to pure ones. Finally, it is revealed that the presence of vacancy defect reduces the thermal conductivity of functionalized SWCNTs. read less USED (high confidence) J. Li, Y. Peng, X. Tang, Q. Xu, B. Liu, and L. Bai, “Lubrication Performance of Hydrogenated Graphene on Diamond-Like Carbon Films Based on Molecular Dynamics Simulation,” Tribology Letters. 2021. link Times cited: 12 USED (high confidence) H. Qu et al., “Selective filling of n-hexane in a tight nanopore,” Nature Communications. 2021. link Times cited: 19 USED (high confidence) H. Qu et al., “Selective filling of n-hexane in a tight nanopore,” Nature Communications. 2021. link Times cited: 0 USED (high confidence) M. Vaezi, H. N. Pishkenari, and A. Nemati, “Mechanism of C60 rotation and translation on hexagonal boron-nitride monolayer.,” The Journal of chemical physics. 2020. link Times cited: 8 Abstract: Newly synthesized nanocars have shown great potential to tra… read moreAbstract: Newly synthesized nanocars have shown great potential to transport molecular payloads. Since wheels of nanocars dominate their motion, the study of the wheels helps us to design a suitable surface for them. We investigated C60 thermal diffusion on the hexagonal boron-nitride (h-BN) monolayer as the wheel of nanocars. We calculated C60 potential energy variation during the translational and rotational motions at different points on the substrate. The study of the energy barriers and diffusion coefficients of the molecule at different temperatures indicated three noticeable changes in the C60 motion regime. C60 starts to slide on the surface at 30 K-40 K, slides freely on the boron-nitride monolayer at 100 K-150 K, and shows rolling motions at temperatures higher than 500 K. The anomaly parameter of the motion reveals that C60 has a diffusive motion on the boron-nitride substrate at low temperatures and experiences superdiffusion with Levy flight motions at higher temperatures. A comparison of the fullerene motion on the boron-nitride and graphene surfaces demonstrated that the analogous structure of the graphene and hexagonal boron-nitride led to similar characteristics such as anomaly parameters and the temperatures at which the motion regime changes. The results of this study empower us to predict that fullerene prefers to move on boron-nitride sections on a hybrid substrate composed of graphene and boron-nitride. This property can be utilized to design pathways or regions on a surface to steer or trap the C60 or other molecular machines, which is a step toward directional transportation at the molecular scale. read less USED (high confidence) H. Zhang, Y. Li, J. Qu, and J. Zhang, “Edge length-dependent interlayer friction of graphene,” RSC Advances. 2020. link Times cited: 4 Abstract: Edge effects have significant implications in friction at th… read moreAbstract: Edge effects have significant implications in friction at the nanoscale. Despite recent progress, a detailed understanding of the relationship between nanoscale friction and contact edges is still sorely lacking. Here, using molecular dynamics simulations, we investigate the intrinsic effect of the edge size on the nanoscale friction between graphene layers in the incommensurate case based on the model of graphene flakes on a supported graphene substrate. An original rectangular graphene sheet is cut and divided into two independent parts, namely, the inside and outside zones, according to a certain path with a hexagonal boundary. The friction of the inside and the outside flakes placed on a substrate is calculated. The results interestingly reveal that the sum of the friction forces on the inside and outside of flakes, termed the “equivalent friction force”, is substantially greater than that of the original rectangular graphene sheet because the additional edge friction of the former two systems is more than that of the latter system. More importantly, the equivalent friction force is linearly proportional to the edge size due to the larger cropped edge size having more edge friction. This work demonstrates the intrinsic dependence of friction on the contact edge size of incommensurate graphene layers. read less USED (high confidence) M. L. P. Júnior, W. F. da Cunha, D. Galvão, and L. A. R. Júnior, “A reactive molecular dynamics study on the mechanical properties of a recently synthesized amorphous carbon monolayer converted into a nanotube/nanoscroll.,” Physical chemistry chemical physics : PCCP. 2020. link Times cited: 7 Abstract: Recently, laser-assisted chemical vapor deposition has been … read moreAbstract: Recently, laser-assisted chemical vapor deposition has been used to synthesize a free-standing, continuous, and stable monolayer amorphous carbon (MAC). MAC is a pure carbon structure composed of randomly distributed five, six, seven, and eight atom rings, which is different from that of disordered graphene. More recently, amorphous MAC-based nanotubes (a-CNT) and nanoscrolls (a-CNS) were proposed. In this work, we have investigated (through fully atomistic reactive molecular dynamics simulations) the mechanical properties and sublimation points of pristine and a-CNT and a-CNS. The results showed that a-CNT and a-CNS have distinct elastic properties and fracture patterns compared to those of their pristine analogs. Both a-CNT and a-CNS presented a non-elastic regime before their total rupture, whereas the CNT and CNS underwent a direct conversion to fractured forms after a critical strain threshold. The critical strain values for the fracture of the a-CNT and a-CNS are about 30% and 25%, respectively, and they are lower than those of the corresponding CNT and CNS cases. Although less resilient to tension, the amorphous tubular structures have similar thermal stability in relation to the pristine cases with sublimation points of 5500 K, 6300 K, 5100 K, and 5900 K for a-CNT, CNT, a-CNS, and CNS, respectively. An interesting result is that the nanostructure behavior is substantially different depending on whether it is a nanotube or a nanoscroll, thus indicating that the topology plays an important role in defining its elastic properties. read less USED (high confidence) Y. Wang, Y. Guo, and W. Guo, “Screening effect of monolayer van der Waals crystals on surface deicing: a molecular simulation study.,” Physical chemistry chemical physics : PCCP. 2020. link Times cited: 4 Abstract: Our extensive molecular dynamics simulations reveal a signif… read moreAbstract: Our extensive molecular dynamics simulations reveal a significant screening effect of monolayer graphene and hexagonal boron nitride (h-BN) on surface deicing of substrates with different degrees of hydrophilicity, including superhydrophilic (SHP) and superhydrophobic (SHB) substrates. Compared with bare surfaces, graphene and h-BN reduce the interfacial shear strength and the normal detaching strength of ice on an SHP substrate but increase the shear and detaching strengths on hydrophobic and SHB substrates. However, the shear and detaching strengths of ice become approximately unified on all of the surfaces, when interface ice layers melt into liquid water, demonstrating the screening capability from graphene and h-BN that weakens the influence of substrates on ice adhesion. Graphene and h-BN coatings suppress ice premelting on the SHP surface and change the dielectric constant of interface ice or water. This work could deepen our understanding of the role of van der Waals crystals in deicing coating. read less USED (high confidence) A. Wei, H. Ye, Y. Gao, and F. Guo, “Unveiling the mechanism of structure-dependent thermal transport behavior in self-folded graphene film: a multiscale study.,” Nanoscale. 2020. link Times cited: 2 Abstract: Understanding the relationship between the microstructures a… read moreAbstract: Understanding the relationship between the microstructures and overall properties is one of the basic concerns for material design and applications. As a ubiquitous structural configuration in nature, the folded morphology is also widely observed in graphene-based nanomaterials, namely grafold. Recently, a self-folded graphene film (SF-GF) material has been successfully fabricated by the assembly of grafolds and exhibits promising applications in thermal management. However, the dependence of thermal properties of SF-GF on the structural features of grafold has remained unclear. We here develop a theoretical model to describe the thermal transport behavior in SF-GF. Our model demonstrates the relationship between the fold length of grafolds and thermal properties of SF-GF. It serves as an efficient and portable tool to predict the temperature profile and thermal conductivity of SF-GF with good validations by large-scale molecular dynamics simulations. Using this model, we further study the evolution of thermal conductivity of SF-GF with the unfolding deformation during the stretch. Moreover, the effect of geometrical irregularity of grafolds is uncovered. The model developed in this work not only provides practical guidelines for the manipulation and design of thermal properties of SF-GF, but also benefits the understanding of thermal transport behaviors in other two-dimensional nanomaterials with folded structures. read less USED (high confidence) H. Seiler et al., “Nuclear dynamics of singlet exciton fission in pentacene single crystals,” Science Advances. 2020. link Times cited: 25 Abstract: Coherent and incoherent long-range atomic motions accompany … read moreAbstract: Coherent and incoherent long-range atomic motions accompany singlet exciton fission in pentacene. Singlet exciton fission (SEF) is a key process for developing efficient optoelectronic devices. An aspect rarely probed directly, yet with tremendous impact on SEF properties, is the nuclear structure and dynamics involved in this process. Here, we directly observe the nuclear dynamics accompanying the SEF process in single crystal pentacene using femtosecond electron diffraction. The data reveal coherent atomic motions at 1 THz, incoherent motions, and an anisotropic lattice distortion representing the polaronic character of the triplet excitons. Combining molecular dynamics simulations, time-dependent density-functional theory, and experimental structure factor analysis, the coherent motions are identified as collective sliding motions of the pentacene molecules along their long axis. Such motions modify the excitonic coupling between adjacent molecules. Our findings reveal that long-range motions play a decisive part in the electronic decoupling of the electronically correlated triplet pairs and shed light on why SEF occurs on ultrafast time scales. read less USED (high confidence) Z. Zhang et al., “Hydrodynamic phonon transport in bulk crystalline polymers,” Physical Review B. 2020. link Times cited: 10 USED (high confidence) J. Wallace, D. Chen, and L. Shao, “Irradiation-enhanced torsional buckling capacity of carbon nanotube bundles,” Journal of Applied Physics. 2020. link Times cited: 4 Abstract: Molecular dynamics simulations are used to understand the to… read moreAbstract: Molecular dynamics simulations are used to understand the torsional buckling of pristine and irradiated carbon nanotube (CNT) bundles. Irradiation-induced inter-tube defects are shown to significantly increase the critical buckling torque and critical buckling angle, while slightly increasing the torsional stiffness. In contrast, intra-tube defects are found to degrade the torsional properties. Such competing interactions cause irradiation enhancement to occur in large bundles where significant inter-tube bonding can occur. However, the irradiation enhancement effect becomes weak for very large bundles in which enhanced inter-tube interactions already exist in unirradiated bundles. In pristine CNT bundles of all sizes under torsional loading, CNTs can slip via the weakly interacting van der Waals force, whereas in the irradiated bundles, the inter-tube defects prevent slipping. The study further shows that the formation of one-dimensional carbon chain defects contributes to enhanced friction under slipping. read less USED (high confidence) Y. Zhang, Q. An, J. Li, B. Lu, W. Wu, and R. Xia, “Strengthening mechanisms of graphene in copper matrix nanocomposites: A molecular dynamics study,” Journal of Molecular Modeling. 2020. link Times cited: 8 USED (high confidence) T. Verhagen, J. Klimeš, B. Pacakova, M. Kalbáč, and J. Vejpravová, “Anomalous Freezing of Low-Dimensional Water Confined in Graphene Nanowrinkles.,” ACS nano. 2020. link Times cited: 13 Abstract: Various properties of water are affected by confinement as t… read moreAbstract: Various properties of water are affected by confinement as the space-filling of the water molecules is very different from bulk water. In our study, we challenged the creation of a stable system in which water molecules are permanently locked in nanodimensional graphene traps. For that purpose, we developed a technique, nitrocellulose-assisted transfer of graphene grown by chemical vapor deposition, which enables capturing of the water molecules below an atomically thin graphene membrane structured into a net of regular wrinkles with a lateral dimension of about 4 nm. After successfully confining water molecules below a graphene monolayer, we employed cryogenic Raman spectroscopy to monitor the phase changes of the confined water as a function of the temperature. In our experiment system, the graphene monolayer structured into a net of fine wrinkles plays a dual role: (i) it enables water confinement and (ii) serves as an extremely sensitive probe for phase transitions involving water via graphene-based spectroscopic monitoring of the underlying water structure. Experimental findings were supported with classical and path integral molecular dynamics simulations carried out on our experimental system. Results of simulations show that surface premelting of the ice confined within the wrinkles starts at ∼200 K and the melting process is complete at ∼240 K, which is far below the melting temperature of bulk water ice. The processes correspond to changes in the doping and strain in the graphene tracked by Raman spectroscopy. We conclude that water can be confined between graphene structured into nanowrinkles and silica substrate and its phase transitions can be tracked via Raman spectral feature of the encapsulating graphene. Our study also demonstrated that peculiar behavior of liquids under spatial confinement can be inspected via the optical response of atomically thin graphene sensors. read less USED (high confidence) J. Huang, Y. Fan, Y. Guo, and Y. Liang, “Axial strain effect on translational motion property of carbon nanotube thermal actuator,” Molecular Simulation. 2020. link Times cited: 2 Abstract: ABSTRACT The possibility of strain engineering of linear mot… read moreAbstract: ABSTRACT The possibility of strain engineering of linear motion property of the double walled carbon nanotube thermal actuator is explored in this paper. Systematical study of axial strain effect on linear motion property of the carbon nanotube thermal actuator is conducted using molecular dynamics, and real-time controlling method for double walled carbon nanotube thermal actuator by applying axial strains is proposed as well. It is found that the axial strain has great influences on the linear motion behaviour of the thermal actuator, implying that the strain effect has potential to control the property of nano actuator. The strain effect and its mechanism are revealed by investigating the variation of thermal driving force and intertube distance as the axial strain is applied. The intertube interaction affected by axial strain is analyzed using the intertube stiffness constant drawn from the analytical model. The valuable conclusions for strain engineering of nanoscale actuator are obtained. This work suggests the great potential of strain effect to be real-time control method to nanoelectromechanical system and provides new ideas for the application of carbon nanotube thermal actuator. read less USED (high confidence) Y. Wen, Q. Liu, and Y.-shou Liu, “Temperature gradient-driven motion and assembly of two-dimensional (2D) materials on the liquid surface: a theoretical framework and molecular dynamics simulation.,” Physical chemistry chemical physics : PCCP. 2020. link Times cited: 2 Abstract: The motion of two-dimensional (2D) materials on the liquid s… read moreAbstract: The motion of two-dimensional (2D) materials on the liquid surface can be controlled by a pre-set temperature gradient. We propose a conceptual design of driving a graphene sheet on the water surface with a temperature gradient and demonstrate that both the velocity and orientation of the motion can be controlled by carefully assigning the magnitude and direction of the gradient of the liquid temperature. The driving force and friction force during the movement of the graphene sheet are derived theoretically by considering the temperature-dependent surface tension of water and the partial slip boundary condition between water and graphene. With this theoretical model, we predict the velocity and direction of the motion of graphene. Comprehensive molecular dynamics (MD) simulations are implemented to validate the theoretical predictions and the results agree well with the theoretical predictions. The motion and assembly of multiple graphene sheets are demonstrated to illustrate the potential application of the temperature gradient of the liquid surface in the manufacturing of low-dimensional materials into architected superstructures. read less USED (high confidence) N. Song, Z. Gao, and X. Li, “Tailoring nanocomposite interfaces with graphene to achieve high strength and toughness,” Science Advances. 2020. link Times cited: 33 Abstract: Tailoring the composite interfaces with graphene enabled eff… read moreAbstract: Tailoring the composite interfaces with graphene enabled effective utilization of the nanofillers. The nanofiller reinforcing effect in nanocomposites is often far below the theoretically predicted values, largely because of the poor interfacial interaction between the nanofillers and matrix. Here, we report that graphene-wrapped B4C nanowires (B4C-NWs@graphene) empowered exceptional dispersion of nanowires in matrix and superlative nanowire-matrix bonding. The 0.2 volume % B4C-NWs@graphene reinforced epoxy composite exhibited simultaneous enhancements in strength (144.2 MPa), elastic modulus (3.5 GPa), and ductility (15%). Tailoring the composite interfaces with graphene enabled effective utilization of the nanofillers, resulting in two times increase in load transfer efficiency. Molecular dynamics simulations unlocked the shear mixing graphene/nanowire self-assembly mechanism. This low-cost yet effective technique presents unprecedented opportunities for improving nanocomposite interfaces, enabling high load transfer efficiency, and opens up a new path for developing strong and tough nanocomposites. read less USED (high confidence) M. Ding, Y. Cong, R. Li, and F. Xu, “Effect of surface topography on anisotropic friction of graphene layers,” Extreme Mechanics Letters. 2020. link Times cited: 3 USED (high confidence) A. Fedorov, P. Krasnov, M. Visotin, F. Tomilin, and S. P. Polyutov, “Thermoelectric and Plasmonic Properties of Metal Nanoparticles Linked by Conductive Molecular Bridges,” physica status solidi (b). 2020. link Times cited: 1 Abstract: Thermoelectric and plasmonic properties of systems comprisin… read moreAbstract: Thermoelectric and plasmonic properties of systems comprising small golden nanoparticles (NPs) linked by narrow conductive polymer bridges are studied using the original hybrid quantum‐classical model. The bridges are considered here to be either conjugated polyacetylene, polypyrrole, or polythiophene chain molecules terminated by thiol groups. The parameters required for the model are obtained using density functional theory and density functional tight‐binding simulations. Charge‐transfer plasmons in the considered dumbbell structures are found to possess frequency in the infrared region for all considered molecular linkers. The appearance of plasmon vibrations and the existence of charge flow through the conductive molecule, with manifestation of quantum properties, are confirmed using frequency‐dependent polarizability calculations implemented in the coupled perturbed Kohn–Sham method. To study the thermoelectric properties of the 1D periodical systems, a universal equation for the Seebeck coefficient is derived. The phonon part of the thermal conductivity for the periodical –NP–S–C8H8 – system is calculated by the classical molecular dynamics. The thermoelectric figure of merit ZT is calculated by considering the electrical quantum conductivity of the systems in the ballistic regime. It is shown that for Au309 nanoparticles connected by polyacetylene, polypyrrole, or polythiophene chains at T = 300 K, the ZT value is {0.08;0.45;0.40}, respectively. read less USED (high confidence) F. Rezaee, F. Yousefi, and F. Khoeini, “Heat transfer in strained twin graphene: A non-equilibrium molecular dynamics simulation,” arXiv: Computational Physics. 2020. link Times cited: 12 USED (high confidence) W. Zhu, Y. Liu, and X. Wei, “Modeling Intrinsic Wrinkles in Graphene and Their Effects on the Mechanical Properties,” JOM. 2020. link Times cited: 0 USED (high confidence) W. Ju, C. Zhu, and Z. Wei, “Intercalated ion tuning of the cross-plane thermal transport properties of graphite,” AIP Advances. 2020. link Times cited: 4 Abstract: The effects of the intercalated ion concentration on the cro… read moreAbstract: The effects of the intercalated ion concentration on the cross-plane thermal conductivity and the thermal boundary conductance in the graphite/lithiated graphite interface are investigated from molecular dynamics simulations. At low ion concentration, the cross-plane thermal conductivity of the lithiated graphite is lower than that of the pristine graphite. However, as the intercalated ion concentration increases, the cross-plane thermal conductivity increases rapidly, even exceeding that of the pristine graphite at high ion concentration. By analyzing the variations of the cross-plane elastic constants and phonon dispersion relation with the intercalated ion concentration, it is found that the intercalated ions significantly increase the phonon irradiation heat flux along the cross-plane direction. Our study further shows that the variation of the intercalated ion concentrations can also modulate the thermal boundary conductance in the graphite/lithiated graphite interface. The non-equilibrium molecular dynamics simulations show that the thermal boundary conductance between graphite and lithiated graphite decreases as the lithiation level increases, which would worsen the thermal performance of Li-ion batteries. A one-dimensional atomic chain model is proposed to elaborate on how the effective spring stiffness of material influences the interfacial transmission of phonons with different frequencies. This work provides a quantitative calculation of the cross-plane thermal conductivity and thermal boundary conductance in intercalated graphite samples and is also extremely important for the thermal management and structural design of lithium-ion batteries. read less USED (high confidence) B. Zheng and G. X. Gu, “Machine Learning-Based Detection of Graphene Defects with Atomic Precision,” Nano-Micro Letters. 2020. link Times cited: 22 USED (high confidence) B. Zheng and G. X. Gu, “Machine Learning-Based Detection of Graphene Defects with Atomic Precision,” Nano-Micro Letters. 2020. link Times cited: 0 USED (high confidence) H. Lin, A. Croy, R. Gutierrez, and G. Cuniberti, “Surface-Phonon-Induced Rotational Dissipation for Nanoscale Solid-State Gears,” arXiv: Mesoscale and Nanoscale Physics. 2020. link Times cited: 3 Abstract: Compared to nanoscale friction of translational motion, the … read moreAbstract: Compared to nanoscale friction of translational motion, the mechanisms of rotational friction have received less attention. Such motion becomes an important issue for the miniaturization of mechanical machineries which often involve rotating gears. In this study, molecular dynamics simulations are performed to explore rotational friction for solid-state gears rotating on top of different substrates. In each case, viscous damping of the rotational motion is observed and found to be induced by the pure van-der-Waals interaction between gear and substrate. The influence of different gear sizes and various substrate materials is investigated. Furthermore, the rigidities of the gear and the substrate are found to give rise to different dissipation channels. Finally, it is shown that the dominant contribution to the dissipation is related to the excitation of low-frequency surface-phonons in the substrate. read less USED (high confidence) Y. Qiu, Y. Zhang, A. Ademiloye, and Z.-tian Wu, “Molecular dynamics simulations of single-layer and rotated double-layer graphene sheets under a high velocity impact by fullerene,” Computational Materials Science. 2020. link Times cited: 15 USED (high confidence) T. Shimada, K. Huang, L. V. Lich, N. Ozaki, B. Jang, and T. Kitamura, “Beyond conventional nonlinear fracture mechanics in graphene nanoribbons.,” Nanoscale. 2020. link Times cited: 6 Abstract: Owing to a finite and single-atom-thick two-dimensional stru… read moreAbstract: Owing to a finite and single-atom-thick two-dimensional structure, graphene nanostructures such as nanoribbons possess outstanding physical properties and unique size-dependent characteristics due to nanoscale defects, especially for mechanical properties. Graphene nanostructures characteristically exhibit strong nonlinearity in deformation and the defect brings about an extremely localized singular stress field of only a few nanometers, which might lead to unique fracture properties. Fundamental understanding of their fracture properties and criteria is, however, seriously underdeveloped and limited to the level of continuum mechanics and linear elasticity. Here, we demonstrate the breakdown of continuum-based fracture criteria for graphene nanoribbons due to the strong nonlinearity and discreteness of atoms emerging with decreasing size and identify the critical sizes for these conventional criteria. We further propose an energy-based criterion considering atomic discrete nature, and show that it can successfully describe the fracture beyond the critical sizes. The complete clarification of fracture criterion for nonlinear graphene with nanoscale singularity contributes not only to the reliable design of graphene-based nanodevices but also to the elucidation of the extreme dimensional limit in fracture mechanics. read less USED (high confidence) V. Demin, D. Kvashnin, P. Vancsó, G. I. Márk, and L. Chernozatonskii, “Wave-Packet Dynamics Study of the Transport Characteristics of Perforated Bilayer Graphene Nanoribbons,” JETP Letters. 2020. link Times cited: 2 USED (high confidence) J. Shi, C. Hu, S. Sun, B. Song, and Q. Qin, “Bonding few-layered graphene via collision with high-speed fullerenes,” Nanotechnology. 2020. link Times cited: 1 Abstract: Graphene, as a typical two-dimensional material, is popular … read moreAbstract: Graphene, as a typical two-dimensional material, is popular in the design of nanodevices. The interlayer relative sliding of graphene sheets can significantly affect the effective bending stiffness of the few-layered graphene. For restricting the relative sliding, we adopted the atomic shot peening method to bond the graphene sheets together by ballistic C60 fullerenes from its two surfaces. Collision effects are evaluated via molecular dynamics simulations. Results obtained indicate that the fullerenes’ incident velocity has an interval, in which the graphene sheet can be bonded after collision while no atoms on the fullerenes escaping from the graphene ribbon after collision. The limits of the interval increase with the layer number. Within a few picoseconds of collision, a stable carbon network is produced at an impacted area. The graphene sheets are bonded via the network and cannot slide relatively anymore. Conclusions are drawn to show the way of potential applications of the method in manufacturing a new graphene-based two-dimensional material that has a high out-of-plane bending stiffness. read less USED (high confidence) J. Huang, Y. Fan, Y. Guo, and Y. Liang, “Study of torsional strain effect on dynamic behavior of carbon nanotube thermal actuator,” Journal of Molecular Modeling. 2020. link Times cited: 0 USED (high confidence) X. Liu, Z. Yu, G. Zhang, and Y.-W. Zhang, “Remarkably high thermal-driven MoS2 grain boundary migration mobility and its implications on defect healing.,” Nanoscale. 2020. link Times cited: 3 Abstract: Two-dimensional (2D) transition-metal dichalcogenides (TMDs)… read moreAbstract: Two-dimensional (2D) transition-metal dichalcogenides (TMDs) hold great potential for many important device applications, such as field effect transistors and sensors, which require a robust control of defect type, density, and distribution. However, how to control the defect type, density, and distribution in these materials is still a challenge. In this study, we explore the kinetics and dynamics of four types of grain boundaries (GBs) in monolayer MoS2, which are composed of S-polar dislocation (S5|7), Mo-polar dislocation (Mo5|7), dislocation-double S vacancy complex (S4|6), and dislocation-double S interstitial complex (S6|8), respectively. Our study shows that these four GBs in monolayer MoS2 exhibit a great disparity in their migration behavior. More specifically, the S4|6 and S6|8 GBs possess a much higher migration mobility than the S5|7 and Mo5|7 GBs under the same thermal fluctuations or temperature gradient. Interestingly, the S4|6 and S6|8 GBs follow an abnormal relationship with temperature, due to the change in defect configurations with temperature. Our study further shows that the remarkably high mobilities of the S4|6 and Mo6|8 GBs may enable the reactions of GBs, leading to the annihilation and reduction of defect density. In addition, the movement of GBs in MoS2 under a temperature gradient field can cause defect redistribution, which in turn changes the thermal conductivity. The present study not only deepens our understanding of the dynamic evolution of GBs in TMDs, but also presents new opportunities to engineer GBs for novel electronic applications. read less USED (high confidence) S. H. Rizi and A. Lohrasebi, “Water distillation modeling by disjoint CNT-based channels under the influence of external electric fields,” Journal of Molecular Modeling. 2020. link Times cited: 2 USED (high confidence) W.-J. Chen and I. Chang, “The Atomistic Study on Thermal Transport of the Branched Cnt,” Journal of Mechanics. 2020. link Times cited: 7 Abstract: In this research, the thermal transport behavior of the bran… read moreAbstract: In this research, the thermal transport behavior of the branched carbon nanotube (CNT) with T-junction was investigated using non-equilibrium molecular dynamics simulation. Both symmetric and asymmetric temperature-controlled simulations were imposed to evaluate how the heat flowed inside the branched CNT with three branches of equal length and same chirality. The branch length and strain effects on the heat flow were examined. In addition, the simulated heat flow was compared with the prediction made by conventional thermal circuit calculation based on diffusive phonon transport. The heat was observed to flow straight rather than sideway inside the branched CNT with T-junction under the asymmetric temperature setup; this finding contradicts the conventional thermal circuit calculation. There are two possible explanations for this phenomenon. One is ballistic phonon transport and the other is phonons have different interactions or scattering with the defective atomic configurations at the T-junction. Moreover, the tensile strain could tune the heat flow, a finding that might be useful in thermal management applications. read less USED (high confidence) P.-Z. Jia et al., “Design of Thermal Metamaterials with Excellent Thermal Control Functions by Using Functional Nanoporous Graphene,” physica status solidi (RRL) – Rapid Research Letters. 2020. link Times cited: 6 Abstract: Thermal metamaterials can effectively manipulate heat flux t… read moreAbstract: Thermal metamaterials can effectively manipulate heat flux to achieve different thermal management functions, such as thermal cloak, concentrator, and rotator. To date, most of these metamaterials are based on macroscopic compound structures, such as metal/polymer. Herein, the concept of thermal metamaterials is extended to two‐dimensional (2D) graphene‐based systems because of their fast response speeds, in contrast to traditional three‐dimensional metamaterials. Three thermal metamaterials with heterogeneous thermal parameters are constructed using nano‐holed graphene, and some extraordinary thermal phenomena, such as effective shielding, accumulation and rotation of heat flux, are observed due to the significant anisotropic thermal conductivity of these 2D systems. Moreover, these thermal phenomena are insensitive to external disturbances. For designing thermal metamaterials, this study provides a novel approach, which can be applied to other 2D thermal functional materials. read less USED (high confidence) H. Yin, Y. Zhang, P. Lu, Y. Zhang, and J. Liu, “Analysis of heat dissipation characteristics of three-dimensional graphene-carbon nanotube composite structures,” 2020 21st International Conference on Electronic Packaging Technology (ICEPT). 2020. link Times cited: 1 Abstract: With the rapid development of electronic materials and techn… read moreAbstract: With the rapid development of electronic materials and technologies, the working frequencies of electronic components and devices have been greatly improved and the volume of electronic products has been shrinking. The integration density has increased significantly, which puts forward higher requirements for thermal management. One of the keys to the heat dissipation of electronic components is to transfer the heat rapidly to the radiator through the heat conducting medium. Therefore, the development of high conductive materials has become a research hotspot of high-density integrated devices and systems. Due to their excellent heat transfer properties, carbon nanomaterials such as carbon nanotube and graphene have attracted extensive attention. The thermal conductivities of carbon nanotube and graphene have obvious anisotropy, which limited their applications to some extent. In this paper, three-dimensional composite structures composed of graphene sheets and carbon nanotubes are considered. The heat transfer processes are simulated by molecular dynamics method and the heat transfer characteristics of van der Waals interaction and chemical bond structures are analyzed. The effects of heat flow and nanotube layout on the thermal properties of three-dimensional composite structures are discussed. read less USED (high confidence) S. Best, J. B. Wasley, C. de Tomas, A. Aghajamali, I. Suarez-Martinez, and N. Marks, “Evidence for Glass Behavior in Amorphous Carbon,” C — Journal of Carbon Research. 2020. link Times cited: 8 Abstract: Amorphous carbons are disordered carbons with densities of c… read moreAbstract: Amorphous carbons are disordered carbons with densities of circa 1.9–3.1 g/cc and a mixture of sp2 and sp3 hybridization. Using molecular dynamics simulations, we simulate diffusion in amorphous carbons at different densities and temperatures to investigate the transition between amorphous carbon and the liquid state. Arrhenius plots of the self-diffusion coefficient clearly demonstrate that there is a glass transition rather than a melting point. We consider five common carbon potentials (Tersoff, REBO-II, AIREBO, ReaxFF and EDIP) and all exhibit a glass transition. Although the glass-transition temperature (Tg) is not significantly affected by density, the choice of potential can vary Tg by up to 40%. Our results suggest that amorphous carbon should be interpreted as a glass rather than a solid. read less USED (high confidence) V. Menon and A. Buldum, “Mechanical properties of graphene-CNT van der Waals heterostructures: a molecular dynamics study,” Nanotechnology. 2020. link Times cited: 1 Abstract: We find stiffness properties of van der Waals heterostructur… read moreAbstract: We find stiffness properties of van der Waals heterostructures made of graphene and carbon nanotubes (CNTs) using molecular dynamics (MD) simulations. The variation of the stiffness tensor is studied at different temperatures for structures with changing CNT density, and orientations. Orthotropic structures with unidirectional CNTs have high stiffness ∼300–500 GPa, in one direction. Structures with transverse isotropy show stiffness of ∼150–350 GPa along two mutually perpendicular directions. The orthotropic structures also show greater stiffness with increasing CNT density, while the others are insensitive to it. In general,the stiffness constant values are decrease as temperatures increase. The results can aid in determining useful heterostructure configuration for a particular application and in finding overall stiffness of devices having additional components. read less USED (high confidence) M. Hanine et al., “Formation of Interstellar Complex Polycyclic Aromatic Hydrocarbons: Insights from Molecular Dynamics Simulations of Dehydrogenated Benzene,” The Astrophysical Journal. 2020. link Times cited: 7 Abstract: Small organic molecules are thought to provide building bloc… read moreAbstract: Small organic molecules are thought to provide building blocks for the formation of complex interstellar polycyclic aromatic hydrocarbons (PAHs). However, the underlying chemical mechanisms remain unclear, particularly concerning the role of interstellar dust. Using molecular dynamics, we simulate the chemical reaction between dehydrogenated benzene molecules in the gas phase or on the surface of an onion-like carbon nanoparticle (NP). The reaction leads to the formation of PAHs of complex structures. The size of the formed molecules is found to roughly increase with increasing temperature up to 800 K, and to be correlated with the level of dehydrogenation. Morphology analysis features the formation of large rings that contain up to 32 carbon atom at high temperature. Density functional theory (DFT) calculations are performed to search the fundamental energetic reaction pathways. The DFT results quantitatively confirm the correlation between the reactivity and the dehydrogenation level, and the formation of stable C-8 rings. Moreover, the nanostructures formed on the NP surface point to a possible layer-by-layer formation mechanism for interstellar fullerene and carbon onions. read less USED (high confidence) S. Ajori, H. Parsapour, and R. Ansari, “A molecular dynamics study on the buckling behavior of single-walled carbon nanotubes filled with gold nanowires,” Journal of Molecular Modeling. 2020. link Times cited: 7 USED (high confidence) N. Wei, Y. Zhang, Y. Chen, and Y. Zhang, “Tuning graphene thermal modulator by rotating,” International Journal of Smart and Nano Materials. 2020. link Times cited: 3 Abstract: ABSTRACT Exploring the thermal transport of graphene is sign… read moreAbstract: ABSTRACT Exploring the thermal transport of graphene is significant for the application of its thermal properties. However, it is still a challenge to regulate the thermal conductivity of graphene interface. We study the interfacial thermal transport mechanism of the bilayer graphene by utilizing the molecular dynamics simulations. During the simulation, the interfacial thermal conductivity is regulated and controlled by lattice matching and tailoring. The lattice mismatched bilayer graphene model, combining the straining and torsion, can increase the interfacial thermal resistance (ITR) about 3.7 times. The variation trend of the ITR is explained by utilizing the vibrational spectra and the overlap factor. Besides, the thermal conductivity is proportional to the overlapping area. Our results show that the tailoring models can regularly control the thermal conductivity in a wide range by twisting the angle between upper and lower layers. These findings can provide a guideline for thermoelectric management and device design of thermal switch. read less USED (high confidence) D. Damasceno, R. Rajapakse, and E. Mesquita, “Atomistic Modelling of Size-Dependent Mechanical Properties and Fracture of Pristine and Defective Cove-Edged Graphene Nanoribbons,” Nanomaterials. 2020. link Times cited: 9 Abstract: Cove-edged graphene nanoribbons (CGNR) are a class of nanori… read moreAbstract: Cove-edged graphene nanoribbons (CGNR) are a class of nanoribbons with asymmetric edges composed of alternating hexagons and have remarkable electronic properties. Although CGNRs have attractive size-dependent electronic properties their mechanical properties have not been well understood. In practical applications, the mechanical properties such as tensile strength, ductility and fracture toughness play an important role, especially during device fabrication and operation. This work aims to fill a gap in the understanding of the mechanical behaviour of CGNRs by studying the edge and size effects on the mechanical response by using molecular dynamic simulations. Pristine graphene structures are rarely found in applications. Therefore, this study also examines the effects of topological defects on the mechanical behaviour of CGNR. Ductility and fracture patterns of CGNR with divacancy and topological defects are studied. The results reveal that the CGNR become stronger and slightly more ductile as the width increases in contrast to normal zigzag GNR. Furthermore, the mechanical response of defective CGNRs show complex dependency on the defect configuration and distribution, while the direction of the fracture propagation has a complex dependency on the defect configuration and position. The results also confirm the possibility of topological design of graphene to tailor properties through the manipulation of defect types, orientation, and density and defect networks. read less USED (high confidence) W. Tang et al., “Mechanical properties and enhancement mechanisms of titanium-graphene nanocomposites,” Acta Mechanica Sinica. 2020. link Times cited: 8 USED (high confidence) W. Tang et al., “Mechanical properties and enhancement mechanisms of titanium-graphene nanocomposites,” Acta Mechanica Sinica. 2020. link Times cited: 0 USED (high confidence) X. Zhang et al., “A powder-metallurgy-based strategy toward three-dimensional graphene-like network for reinforcing copper matrix composites,” Nature Communications. 2020. link Times cited: 130 USED (high confidence) M. Yan, T. Li, P. Zheng, R. Wei, Y. Jiang, and H. Li, “Wetting state transition of a liquid gallium drop at the nanoscale.,” Physical chemistry chemical physics : PCCP. 2020. link Times cited: 8 Abstract: Wetting state transition regulated by surface roughness has … read moreAbstract: Wetting state transition regulated by surface roughness has increasing importance for its wide applications. Molecular dynamics simulations have been performed to study the wetting state transition induced by surface roughness in the gallium-carbon system. There is a transition from the Wenzel state to the Cassie state when the roughness is changed. When the surface roughness is more than 1.8, the gallium droplet is in a Cassie state, but when it is less than 1.6, it is in the Wenzel state. The substrate composed of irregular pillars has a similar effect on the wetting state transition. Besides, distinctive variations occur in the interface tension, the mean-squared displacement, the wetted surface and the interaction energy as the wetting state changes, which are further explained by the proposed model. This study would provide significant guidance for designing superhydrophobic surfaces in the future. read less USED (high confidence) D. K. V. S, S. Kannam, and S. P. Sathian, “Thermal conductivity of graphene under biaxial strain: an analysis of spectral phonon properties,” Nanotechnology. 2020. link Times cited: 5 Abstract: Thermal transport in graphene is strongly influenced by stra… read moreAbstract: Thermal transport in graphene is strongly influenced by strain. We investigate the influence of biaxial tensile strain on the thermal conductivity of zigzag and armchair graphene (AG and ZG) using non-equilibrium molecular dynamics simulations (NEMD). We observe that the thermal conductivity is significantly reduced under strain with a maximum reduction obtained at equi-biaxial strain. It is interesting to note that the high lateral to longitudinal strain ratios reduce the negative impact of strain on the thermal conductivity of AG and ZG. The in-plane acoustic modes are found to be the major heat carriers in unstrained graphene but are severely softened due to strain, and hence, their contribution to the conductivity drops down significantly. Strain alleviates the out-of-plane fluctuations in graphene and the group velocity of the out-of-plane acoustic mode (ZA) increases due to the linearisation of its dispersion relation. These factors result in the dominance of ZA mode in the thermal transport of strained graphene. Significant increase in the size dependence of the thermal conductivity of strained graphene is observed, which is attributed to the long-wavelength ZA phonons. The discrepancies between the results of BTE studies and NEMD are also discussed. This study suggests that biaxial strain can be an effective method to tune the thermal transport in graphene. Our findings can lead to better phonon engineering of graphene for various nanoscale applications. read less USED (high confidence) C. Nguyen and A. Beskok, “Water desalination performance of h-BN and optimized charged graphene membranes,” Microfluidics and Nanofluidics. 2020. link Times cited: 12 USED (high confidence) C. Nguyen and A. Beskok, “Water desalination performance of h-BN and optimized charged graphene membranes,” Microfluidics and Nanofluidics. 2020. link Times cited: 0 USED (high confidence) H. Gong, J. Liu, K. Xu, J. Wu, and Y. Li, “Surface-topology-controlled mechanical characteristics of triply periodic carbon Schwarzite foams.,” Soft matter. 2020. link Times cited: 7 Abstract: Bulky sp2-carbon Schwarzites with negative Gaussian curvatur… read moreAbstract: Bulky sp2-carbon Schwarzites with negative Gaussian curvature are promising structures for practical applications due to their unique properties such as high surface area, large porosity, and stability against graphitization. Herein, a comprehensive study on the tension, compression and shear mechanical characteristics of seven triply periodic carbon Schwarzite foams with distinct topologies is performed using reactive molecular dynamics (MD) simulations. All carbon Schwarzites exhibit unique thermal and mechanical properties that are markedly dictated by the topology. One of the structures presents a negative thermal expansion coefficient. Under uniaxial tension, the temperature is able to play a positive or negative role in the tensile stiffness, and there is no apparent positive relationship between tensile strength and mass density. Subjected to compression and shear loads, carbon Schwarzites can fail due to brittle fracture, and uniform and stepwise structural instabilities. Both compression- and tension-negative Poisson's ratios are revealed to originate from a curvature-flattening deformation mechanism. Analysis of the crush force efficiency, the stroke efficiency and the energy-absorption demonstrates that carbon Schwarzites are effective energy-absorbers. This study provides a fundamental understanding of the relationship between the topology and mechanical properties of carbon Schwarzites for designing 3D graphitic nanostructures with good mechanical performances. read less USED (high confidence) H. Lin, J. Heinze, A. Croy, R. Gutierrez, and G. Cuniberti, “Mechanical Transmission of Rotation for Molecule Gears and Solid-State Gears,” Building and Probing Small for Mechanics. 2020. link Times cited: 2 USED (high confidence) H. Tafrishi, S. Sadeghzadeh, F. Molaei, and H. Siavoshi, “Investigating the effects of adding hybrid nanoparticles, graphene and boron nitride nanosheets, to octadecane on its thermal properties,” RSC Advances. 2020. link Times cited: 20 Abstract: Octadecane is an alkane that is used to store thermal energy… read moreAbstract: Octadecane is an alkane that is used to store thermal energy at ambient temperature as a phase change material. A molecular dynamics study was conducted to investigate the effects of adding graphene and a boron nitride nanosheet on the thermal and structural properties of octadecane paraffin. The PCFF force field for paraffin, AIREBO potential for graphene, Tersoff potential for the boron nitride nanosheet, and Lennard-Jones potential for the van der Waals interaction between the nanoparticles and n-alkanes were used. Equilibrium and nonequilibrium molecular dynamics simulations were used to study the nano-enhanced phase change material properties. Results showed that the nanocomposite had a lower density change, more heat capacity (except at 300 K), more thermal conductivity, and a lower diffusion coefficient in comparison with pure paraffin. Additionally, the nanocomposite had a higher melting point, higher phonon density of state and radial distribution function peaks. read less USED (high confidence) B. S. Baboukani, Z. Ye, K. G. Reyes, and P. Nalam, “Prediction of Nanoscale Friction for Two-Dimensional Materials Using a Machine Learning Approach,” Tribology Letters. 2020. link Times cited: 37 USED (high confidence) V. Vardanyan and H. Urbassek, “Strength of Graphene-Coated Ni Bi-Crystals: A Molecular Dynamics Nano-Indentation Study,” Materials. 2020. link Times cited: 9 Abstract: Nanoindentation simulations are performed for a Ni(111) bi-c… read moreAbstract: Nanoindentation simulations are performed for a Ni(111) bi-crystal, in which the grain boundary is coated by a graphene layer. We study both a weak and a strong interface, realized by a 30∘ and a 60∘ twist boundary, respectively, and compare our results for the composite also with those of an elemental Ni bi-crystal. We find hardening of the elemental Ni when a strong, i.e., low-energy, grain boundary is introduced, and softening for a weak grain boundary. For the strong grain boundary, the interface barrier strength felt by dislocations upon passing the interface is responsible for the hardening; for the weak grain boundary, confinement of the dislocations results in the weakening. For the Ni-graphene composite, we find in all cases a weakening influence that is caused by the graphene blocking the passage of dislocations and absorbing them. In addition, interface failure occurs when the indenter reaches the graphene, again weakening the composite structure. read less USED (high confidence) F. Wang, Z. Cui, D. Li, and B. Ji, “Bidirectional regulation of configuration of the carbon nanotube containing a water droplet,” Nanotechnology. 2020. link Times cited: 1 Abstract: Carbon nanotube complexes are known for their miraculous mec… read moreAbstract: Carbon nanotube complexes are known for their miraculous mechanical and electronic properties that are crucial for nano-electromechanical systems (MEMS). In this study, through molecular dynamics simulations we found for the first time that the electric field and temperature can be used to co-regulate a reversible change of cross-sectional configuration of single-wall carbon nanotubes (SWCNTs). We showed that the electric field can help induce the collapse of an SWCNT when it contains a water droplet, while the increase of temperature can quickly recover its configuration. This controllable bistability of SWCNTs is promising for the design of nanodevices such as electromechanical switches in NEMS. read less USED (high confidence) R. Sun, L. Li, H. Zhang, and J. Yang, “Effect of hydrogen functionalization on interfacial behavior of defective‐graphene/polymer nanocomposites,” Polymer Composites. 2020. link Times cited: 14 USED (high confidence) M. Slepchenkov, V. Mitrofanov, I. Nefedov, and O. Glukhova, “Electrical and Photovoltaic Properties of Layered Composite Films of Covalently Bonded Graphene and Single-Walled Carbon Nanotubes,” Coatings. 2020. link Times cited: 1 Abstract: In this paper, we present the results of a computational stu… read moreAbstract: In this paper, we present the results of a computational study of the electrical and photovoltaic properties of a perspective composite material; that is, layered composite films of covalently bonded graphene and single-walled carbon nanotubes (SWCNTs). The purpose of the study is to identify the topological patterns in controlling the electrical and photovoltaic properties of mono- and bilayer graphene/CNT composite films with a covalent bonding of a nanotube and graphene sheet, using in silico methods. This in silico study was carried out for the super-cells of mono- and bilayer graphene/CNT composite films with the CNTs (10,0) and (12,0) at distances between the nanotubes of 10 and 12 hexagons. This found that the type of conductivity of the nanotubes does not fundamentally affect the patterns of current flow in the graphene/CNT composite films. This control of the diameter of the nanotubes and the distance between them allows us to control the profile of the absorption spectrum of the electromagnetic waves in the range of 20–2000 nm. The control of the distance between the SWCNTs allows one to control the absorption intensity without a significant peak shift. This revealed that there is no obvious dependence of the integrated photocurrent on the distance between the nanotubes, and the photocurrent varies between 3%–4%. read less USED (high confidence) N. Kateris, P. A. Kloza, R. Qiao, J. Elliott, and A. Boies, “From Collisions to Bundles: An Adaptive Coarse-Grained Model for the Aggregation of High-Aspect-Ratio Carbon Nanotubes,” The Journal of Physical Chemistry C. 2020. link Times cited: 5 Abstract: We present an adaptive mesoscale model for carbon nanotube (… read moreAbstract: We present an adaptive mesoscale model for carbon nanotube (CNT) systems. In our model, CNTs are represented as a chain of nodes connected by tensile and torsion springs to describe stretching and ... read less USED (high confidence) X. Lin and Q. Han, “Molecular dynamic simulation of defect-driven rotary system based on a triple-walled carbon nanotube and graphene,” Molecular Simulation. 2020. link Times cited: 9 Abstract: ABSTRACT In this paper, a nanoscale rotary system, composed … read moreAbstract: ABSTRACT In this paper, a nanoscale rotary system, composed of graphene substrate and triple-walled nanotube driven by defect effect, is proposed. Its rotational properties, as well as the influence of temperature, defect location and chiral combination of carbon nanotube, are systematically investigated using molecular dynamic simulations. It is found that the rotation of the nanotubes is driven by the defects placed on the graphene with a stable rotation frequency, and that the source of energy for the rotary system is originated from the unbalanced atomic vibration on graphene near carbon nanotubes. The results show that the system temperature, the location of the defect and the chiral pair of the carbon nanotubes have effects on the rotor rotation frequency. Based on the analysis of molecular dynamic simulation results, the mechanism of this rotation is studied. The application of nano-rotation system, composed of graphene and triple-walled carbon nanotubes in nanomachines, is prospected. read less USED (high confidence) A. Y. Nobakht et al., “Reconstruction of effective potential from statistical analysis of dynamic trajectories,” arXiv: Mesoscale and Nanoscale Physics. 2020. link Times cited: 6 Abstract: The broad incorporation of microscopic methods is yielding a… read moreAbstract: The broad incorporation of microscopic methods is yielding a wealth of information on atomic and mesoscale dynamics of individual atoms, molecules, and particles on surfaces and in open volumes. Analysis of such data necessitates statistical frameworks to convert observed dynamic behaviors to effective properties of materials. Here we develop a method for stochastic reconstruction of effective acting potentials from observed trajectories. Using the Silicon vacancy defect in graphene as a model, we develop a statistical framework to reconstruct the free energy landscape from calculated atomic displacements. read less USED (high confidence) J. C. Jiménez-García, J. Olmos-Asar, E. E. Franceschini, and M. Mariscal, “Electrochemical area of graphene-supported metal nanoparticles from an atomistic approach,” Journal of Applied Electrochemistry. 2020. link Times cited: 10 USED (high confidence) H. Zhao et al., “Fluidic Flow Assisted Deterministic Folding of Van der Waals Materials,” Advanced Functional Materials. 2020. link Times cited: 6 Abstract: Origami offers a distinct approach for designing and enginee… read moreAbstract: Origami offers a distinct approach for designing and engineering new material structures and properties. The folding and stacking of atomically thin van der Waals (vdW) materials, for example, can lead to intriguing new physical properties including bandgap tuning, Van Hove singularity, and superconductivity. On the other hand, achieving well‐controlled folding of vdW materials with high spatial precision has been extremely challenging and difficult to scale toward large areas. Here, a deterministic technique is reported to fold vdW materials at a defined position and direction using microfluidic forces. Electron beam lithography (EBL) is utilized to define the folding area, which allows precise control of the folding geometry, direction, and position beyond 100 nm resolution. Using this technique, single‐atomic‐layer vdW materials or their heterostructures can be folded without the need for any external supporting layers in the final folded structure. In addition, arrays of patterns can be folded across a large area using this technique and electronic devices that can reconfigure device functionalities through folding are also demonstrated. Such scalable formation of folded vdW material structures with high precision can lead to the creation of new atomic‐scale materials and superlattices as well as opening the door to realizing foldable and reconfigurable electronics. read less USED (high confidence) L. C. Felix, R. Tromer, P. A. Autreto, L. A. R. Júnior, and D. Galvão, “On the Mechanical Properties and Thermal Stability of a Recently Synthesized Monolayer Amorphous Carbon,” The Journal of Physical Chemistry C. 2020. link Times cited: 23 Abstract: Recently (C.-T. Toh et al., Nature 577, 199 (2020)), the fir… read moreAbstract: Recently (C.-T. Toh et al., Nature 577, 199 (2020)), the first synthesis of free-standing monolayer amorphous carbon (MAC) was achieved. MAC is a pure carbon structure composed of five, six, seven and eight atom rings randomly distributed. MAC proved to be surprisingly stable and highly fracture resistant. Its electronic properties are similar to boron nitride. In this work, we have investigated the mechanical properties and thermal stability of MAC models using fully-atomistic reactive molecular dynamics simulations. For comparison purposes, the results are contrasted against pristine graphene (PG) models of similar dimensions. Our results show that MAC and PG exhibit distinct mechanical behavior and fracture dynamics patterns. While PG after a critical strain threshold goes directly from elastic to brittle regimes, MAC shows different elastic stages between these two regimes. Remarkably, MAC is thermally stable up to 3600 K, which is close to the PG melting point. These exceptional physical properties make MAC-based materials promising candidates for new technologies, such as flexible electronics. read less USED (high confidence) A. Joy, S. Varughese, A. Kanjarla, S. S, and P. Haridoss, “Effect of the structure and morphology of carbon nanotubes on the vibration damping characteristics of polymer-based composites,” Nanoscale Advances. 2020. link Times cited: 5 Abstract: The structure and morphology of the reinforcing material pla… read moreAbstract: The structure and morphology of the reinforcing material play an important role in the vibration damping characteristics of polymer composites. In this work, multiwalled carbon nanotubes (MWCNTs) with different structures and morphologies are incorporated into a polymer matrix. The vibration damping characteristics of the nanocomposites, in Oberst beam configuration, are studied using a free vibration test in cantilever mode. Inner tube oscillation is established as the vibration damping mechanism by correlating the extent of the loss factor obtained from the two nanocomposites with the dissimilarities in the structure and morphology of the two varieties of MWCNTs. Inner tube oscillation is simulated using molecular dynamics (MD). Since the open-ended double walled CNT (DWCNT) models used in earlier studies over predict the damping, we propose a capped DWCNT model. This can simulate the atomic interactions at the end caps of the tube. This study indicates that the contributions to the observed damping have their origins in the interaction between atoms that constitute the inner and outer tubes rather than the inter-tube frictional energy loss. read less USED (high confidence) X. Long, Y. Cai, W. Jian, L. Wang, and S. Luo, “Acoustic and double elastic shock waves in single-crystal graphene,” Journal of Applied Physics. 2020. link Times cited: 7 Abstract: Double elastic shock waves are rarely observed in two-dimens… read moreAbstract: Double elastic shock waves are rarely observed in two-dimensional (2D) materials and normally unexpected for elastically isotropic 2D crystals such as graphene. With large-scale molecular dynamics simulations, we show that in single-crystal graphene shock-loaded along nonzigzag and nonarmchair directions, double elastic shock waves (quasilongitudinal and quasitransverse) can emerge. Quantitative acoustic wave equation analysis reveals that shock-induced symmetry reduction in lattice, as well as in elastic stiffness tensor, gives rise to the normally unexpected quasitransverse wave following the quasilongitudinal wave.Double elastic shock waves are rarely observed in two-dimensional (2D) materials and normally unexpected for elastically isotropic 2D crystals such as graphene. With large-scale molecular dynamics simulations, we show that in single-crystal graphene shock-loaded along nonzigzag and nonarmchair directions, double elastic shock waves (quasilongitudinal and quasitransverse) can emerge. Quantitative acoustic wave equation analysis reveals that shock-induced symmetry reduction in lattice, as well as in elastic stiffness tensor, gives rise to the normally unexpected quasitransverse wave following the quasilongitudinal wave. read less USED (high confidence) M. Li, Z. Guo, and T. Chang, “Adhesion and stress-enhanced elastocaloric effect in graphene,” Science China Technological Sciences. 2020. link Times cited: 5 USED (high confidence) J. Gruber, M. Barsoum, and G. Tucker, “Characterization of ripplocation mobility in graphite,” Materials Research Letters. 2020. link Times cited: 10 Abstract: ABSTRACT Recent work suggests that layered solids deform thr… read moreAbstract: ABSTRACT Recent work suggests that layered solids deform through buckling of basal planes. When isolated locally, as in graphite, these buckles, termed ripplocations, behave superficially similar to dislocations, but have no Burgers vectors. Through atomistic simulations, we demonstrate the easy transitions of ripplocations in graphite between many closely-spaced energy states, even at low temperatures. Between 60 and 350 K, their migration barrier is estimated at 32 meV, independent of segment length. Ripplocations spontaneously migrate towards vacancies and away from compressive stresses. These results shed more light on this new micromechanism and potentially explain experimental observations that evade sufficient description through dislocation-based models. GRAPHICAL ABSTRACT IMPACT STATEMENT These results shed more light on this new micromechanism and the high mobility and vacancy interactions of ripplocations potentially explain experimental observations that evade sufficient description through dislocation-based model. read less USED (high confidence) H. Moosavian and H. Shodja, “Mindlin–Eringen anisotropic micromorphic elasticity and lattice dynamics representation,” Philosophical Magazine. 2020. link Times cited: 9 Abstract: ABSTRACT To account for certain essential features of materi… read moreAbstract: ABSTRACT To account for certain essential features of material such as dispersive behaviour and optical branches in dispersion curves, a fundamental departure from classical elasticity to polar theories is required. Among the polar theories, micromorphic elasticity of appropriate grades and anisotropy is capable of capturing these physical phenomena completely. In the mathematical framework of micromorphic elasticity, in addition to the traditional elastic constants, some additional constants are introduced in the pertinent governing equations of motion. A precise evaluation of the numerical values of the aforementioned elastic constants in the realm of the experimentations poses serious difficulties. Thus this paper aims to provide a remedy as how to determine the micromorphic elastic constants theoretically in terms of the atomic force constants and lattice parameters of the crystalline solid with general anisotropy. In this treatment capture of the discrete nature of matter becomes an essential factor. To this end, the discrete lattice dynamics equations of a crystal are related to the pertinent anisotropic micromorphic equations of motion. This approach allows incorporating the symmetry groups of the crystals within lattice dynamics equations conveniently. For the illustration of the current theoretical developments, the micromorphic elastic constants of diamond and silicon crystals are computed in conjunction with ab initio density functional perturbation theory (DFPT). Moreover, the longitudinal and transverse optical and acoustic branches pertinent to [100] and [110] directions are presented. The accuracy of the results is verified by comparing the dispersion curves derived from the micromorphic theory, those of available experiments, and those directly obtained from DFPT calculations. read less USED (high confidence) Y. Peng, J. Li, X. Tang, B. Liu, X. Chen, and L. Bai, “Friction Reduction of Hydrogenated Graphene by Strain Engineering,” Tribology Letters. 2020. link Times cited: 14 USED (high confidence) W. Toh, E. Y. Ang, T. Ng, R. Lin, and Z. Liu, “Nanopumping of water via rotation of graphene nanoribbons,” Nanotechnology. 2020. link Times cited: 1 Abstract: In this paper, we perform molecular dynamics simulations to … read moreAbstract: In this paper, we perform molecular dynamics simulations to propose a novel bio-inspired nanopumping mechanism that is achieved through the rotation of graphene nanoribbons. Due to the rotation and interaction with water, the graphene nanoribbons undergo morphological transformation. It is shown that with appropriate geometrical and spatial parameters, the resulting morphology is twisted ribbon, which is efficient in pumping of water through a channel. This mimics the propulsive behavior of bacterial flagella through continual rotation at the base and causing morphology of the geometry into twisted ribbons, thus driving flow. It was observed that the maximum flux rate decreases upon reaching the optimal configuration even with increasing rotational speed and graphene width. This is due to the development of cavitation near the region of the nanoribbon with tip velocities approaching the speed of sound in water. The simulation shows promising results where the flux rate of the driven flow outperforms various nanopump configurations that have been reported in recent literature by more than one order. read less USED (high confidence) L. C. Felix, V. Gaal, C. Woellner, V. Rodrigues, and D. Galvão, “Mechanical Properties of Diamond Schwarzites: From Atomistic Models to 3D-Printed Structures,” MRS Advances. 2020. link Times cited: 11 Abstract: Triply Periodic Minimal Surfaces (TPMS) possess locally mini… read moreAbstract: Triply Periodic Minimal Surfaces (TPMS) possess locally minimized surface area under the constraint of periodic boundary conditions. Different families of surfaces were obtained with different topologies satisfying such conditions. Examples of such families include Primitive (P), Gyroid (G) and Diamond (D) surfaces. From a purely mathematical subject, TPMS have been recently found in materials science as optimal geometries for structural applications. Proposed by Mackay and Terrones in 1991, schwarzites are 3D crystalline porous carbon nanocrystals exhibiting a TPMS-like surface topology. Although their complex topology poses serious limitations on their synthesis with conventional nanoscale fabrication methods, such as Chemical Vapour Deposition (CVD), schwarzites can be fabricated by Additive Manufacturing (AM) techniques, such as 3D Printing. In this work, we used an optimized atomic model of a schwarzite structure from the D family (D8bal) to generate a surface mesh that was subsequently used for 3D-printing through Fused Deposition Modelling (FDM). This D schwarzite was 3D-printed with thermoplastic PolyLactic Acid (PLA) polymer filaments. Mechanical properties under uniaxial compression were investigated for both the atomic model and the 3D-printed one. Fully atomistic Molecular Dynamics (MD) simulations were also carried out to investigate the uniaxial compression behavior of the D8bal atomic model. Mechanical testings were performed on the 3D-printed schwarzite where the deformation mechanisms were found to be similar to those observed in MD simulations. These results are suggestive of a scale-independent mechanical behavior that is dominated by structural topology. read less USED (high confidence) D. Luong et al., “Gram-scale bottom-up flash graphene synthesis,” Nature. 2020. link Times cited: 341 USED (high confidence) J. Zhang et al., “Effects of interlayer interactions on the nanoindentation response of freely suspended multilayer gallium telluride,” Nanotechnology. 2019. link Times cited: 11 Abstract: Freestanding indentation is a widely used method to characte… read moreAbstract: Freestanding indentation is a widely used method to characterise the elastic properties of two-dimensional (2D) materials. However, many controversies and confusion remain in this field due to the lack of appropriate theoretical models in describing the indentation responses of 2D materials. Taking the multilayer gallium telluride (GaTe) as an example, in this paper we conduct a series of experiments and simulations to achieve a comprehensive understanding of its freestanding indentation behaviours. Specifically, the freestanding indentation experiments show that the elastic properties of the present multilayer GaTe with a relatively large thickness can only be extracted from the bending stage in the indentation process rather than the stretching stage widely utilised in the previous studies on thin 2D materials, since the stretching stage of thick 2D materials is inevitably accompanied with severe plastic deformations. In combination with existing continuum mechanical models and finite element simulations, an extremely small Young’s modulus of multilayer GaTe is obtained from the nanoindentation experiments, which is two orders of magnitude smaller than the value obtained from first principles calculations. Our molecular dynamics (MD) simulations reveal that this small Young’s modulus can be attributed to the significant elastic softening in the multilayer GaTe with increasing thickness and decreasing length. It is further revealed in MD simulations that this size-induced elastic softening originates from the synergistic effects of interlayer compression and interlayer shearing in the multilayer GaTe, both of which, however, are ignored in the existing indentation models. To consider these effects of interlayer interactions in the theoretical modelling of the freestanding indentation of multilayer GaTe, we propose here novel multiple-beam and multiple-plate models, which are found to agree well with MD results without any additional parameters fitting and thus can be treated as more precise theoretical models in characterising the freestanding indentation behaviours of 2D materials. read less USED (high confidence) X. Yuan and Y. Wang, “The peeling behavior of compliant cylindrical shells in adhesive contact with a planar rigid substrate.,” Soft matter. 2019. link Times cited: 2 Abstract: In this work, we study the peeling of a cylindrical shell at… read moreAbstract: In this work, we study the peeling of a cylindrical shell attached to a smooth rigid substrate and subjected to a vertical force. A generalized peeling model based on the energy-variational approach is presented, and its numerical solutions characterize the cross-section profile and peeling force. The interfacial interactions are represented by the Lennard-Jones potential. Molecular dynamics simulations are performed for the peeling system with single-walled carbon nanotubes and gold substrates, and simulation results show good agreement with the theoretical predictions. We show that there are three stages (stable peeling stage, line-contact stage, and pull-off stage) in the entire peeling process. A spring-like behavior is observed in the stable peeling stage. With the peeling displacement increasing, the second stage has a marked feature of line contact and the peeling force arrives at a peak pull-off force. Furthermore, we show that the pull-off force strongly depends on the flexural stiffness of cylindrical shell and two Lennard-Jones parameters, but is independent of the initial radius of cylindrical shell. Our findings may help to reveal the interactions between thin-walled nanotubes and substrates. read less USED (high confidence) B. Faria, C. E. S. Bernardes, N. Silvestre, and J. C. C. Lopes, “C13 - a new empirical force field to characterize the mechanical behavior of carbyne chains.,” Physical chemistry chemical physics : PCCP. 2019. link Times cited: 2 Abstract: An accurate prediction of the mechanical behavior of long ca… read moreAbstract: An accurate prediction of the mechanical behavior of long carbyne chains depends on the suitable modeling of bond alternation in these chains. While first-principles methods are a good approach, less computationally demanding empirical potentials are preferable for large carbyne-containing systems. AIREBO and Reax empirical potentials have extensively and successfully been used for simulating the mechanical behavior of graphene and carbon nanotubes. However, it remains unclear if these potentials can be directly applied in the accurate mechanical modeling of carbon nanostructures with sp hybridization, without re-parameterization. Here, a new force-field for carbyne, designated as C13 potential, that takes bond alternation into account, is presented. This new empirical potential was parameterized from ab initio calculations. Molecular dynamics (MD) simulations using the developed force-field are then conducted to determine the mechanical properties of carbyne chains under tensile loading, namely to assess their dependence on chain length and temperature. The bending stiffness of carbyne and its persistence length are also calculated. The results obtained are validated through comparison with results available in the literature. Lastly, the C13 potential is employed to model, for the first time, the tensile and the compressive behaviors of the hybrid system composed of carbon nanotubes infilled with carbyne chains. read less USED (high confidence) B. Zheng and G. X. Gu, “Recovery from mechanical degradation of graphene by defect enlargement,” Nanotechnology. 2019. link Times cited: 8 Abstract: The extraordinary properties of graphene have made it an eli… read moreAbstract: The extraordinary properties of graphene have made it an elite candidate for a broad range of emerging applications since its discovery. However, the introduction of structural defects during graphene production often compromises the theoretically predicted performance of graphene-based technologies to a great extent. In this study, a counterintuitive defect enlargement strategy to recover from defect-induced mechanical degradation is explored, of which the realization may lead to an enhanced operating efficiency and manufacturing feasibility. Our molecular-dynamics simulation results show that the enlargement of a preexisting defect to an elliptical shape can potentially recover from the mechanical degradation that the very defect has caused. For a defective graphene sheet having a failure strain of 48% of the pristine graphene sheet, enlarging the defect can enhance the failure strain up to 80% of the pristine graphene sheet. The mechanism of degradation recovery lies in a reduced change in curvature during deformation, which is further solidified by theoretical quantification and stress-field analysis. This theory can also predict and pinpoint the location of the initiation of the fracture—where the curvature changes most significantly during the deformation. In addition, the influence of an elliptical defect on the mechanical properties of a graphene sheet is systematically studied, which is not well understood today. Finally, the degradation recovery potential of defect of various sizes is examined, showing that the initial defect that can create the highest degree of geometric asymmetry has the best potential for degradation recovery. This study investigates the recovery from defect-induced mechanical degradation and the influence of elliptical defects on the mechanical properties of a graphene sheet, which widens our understanding of the possibility of fine-tuning mechanical properties via defect engineering and has the potential to improve materials for emerging technologies such as supercapacitor devices. read less USED (high confidence) H. Yu, M. Yang, W. Zhu, T. Chang, and J.-W. Jiang, “Diameter-dependent polygonal cross section for holey phenine nanotubes,” Nanotechnology. 2019. link Times cited: 2 Abstract: The cross-sectional shape of the nanotube is a key factor go… read moreAbstract: The cross-sectional shape of the nanotube is a key factor governing fundamental mechanical properties of the nanotube and the nanotube forest. In contrast to most circular nanotubes, in the present work, we demonstrate that the holey phenine nanotubes have polygonal cross sections with diameter-dependent number of sides. The non-circular cross section is attributed to the high twistability of the continuous C–C chains in the phenine nanotube. Consequently, the phenine nanotube forest has a square lattice structure rather than the regular hexagonal lattice of the carbon nanotube forest, resulting in a smooth buckling process under biaxial compression. The buckling pattern of the phenine nanotube forest is highly ordered with the orientation determined by the initial dislocation that frequently appears in the phenine nanotube forest. read less USED (high confidence) S. Zhuang, F. Zhang, Y. Liu, and C. Lu, “Exceptional high thermal conductivity of inter-connected annular graphite structures.,” Physical chemistry chemical physics : PCCP. 2019. link Times cited: 1 Abstract: Based on the experimentally observed templating effects in C… read moreAbstract: Based on the experimentally observed templating effects in CNTs containing carbon fibers, new types of inter-connected annular graphite structures are proposed and designed in order to significantly improve the cross-plane thermal conductivity of graphite. The calculations of the thermal conductivity of the newly designed structures were carried out by combining macroscopic continuous equations and microscopic molecular dynamic (MD) simulations. First, MD simulation was used to examine the influence of bending curvature on the in-plane thermal conductivity of a graphene sheet along and perpendicular to the rolling direction. Next, various types of annular graphite structures with single and inter-connected double/triple multi-layered graphite sheets were designed. Finally, finite element analysis was used to calculate the effective out of plane thermal conductivities of these structural models. The cross-plane thermal conductivity of a common graphite film is 2-3 orders of magnitude lower than its in-plane thermal conductivity, which strongly restricts its heat dissipation ability. However, the formation of annular graphite structures and the inter-connections of the outer layers lead to a dramatic improvement of effective out of plane thermal conductivity from 2.3 W m-1 K-1 to 799.8 W m-1 K-1 in this work, which is superior to common metal materials, especially considering the relatively lower density of carbon materials. These results would be valuable for designing and fabricating highly thermally conductive carbon materials for heat dissipation and temperature management. read less USED (high confidence) S. Sajadi et al., “3D Printed Tubulanes as Lightweight Hypervelocity Impact Resistant Structures.,” Small. 2019. link Times cited: 36 Abstract: Lightweight materials with high ballistic impact resistance … read moreAbstract: Lightweight materials with high ballistic impact resistance and load-bearing capabilities are regarded as a holy grail in materials design. Nature builds these complementary properties into materials using soft organic materials with optimized, complex geometries. Here, the compressive deformation and ballistic impact properties of three different 3D printed polymer structures, named tubulanes, are reported, which are the architectural analogues of cross-linked carbon nanotubes. The results show that macroscopic tubulanes are remarkable high load-bearing, hypervelocity impact-resistant lightweight structures. They exhibit a lamellar deformation mechanism, arising from the tubulane ordered pore structure, manifested across multiple length scales from nano to macro dimensions. This approach of using complex geometries inspired by atomic and nanoscale models to generate macroscale printed structures allows innovative morphological engineering of materials with tunable mechanical responses. read less USED (high confidence) H. Söngen et al., “Hydration layers at the graphite-water interface: Attraction or confinement,” Physical Review B. 2019. link Times cited: 9 Abstract: Water molecules at solid surfaces typically arrange in layer… read moreAbstract: Water molecules at solid surfaces typically arrange in layers. The physical origin of the hydration layers is usually explained by two different reasons: (1) the attraction between the surface and water and (2) the water confinement due to the surface. While the attraction is specific to the particular solid, the confinement is a general property of surfaces; a differentiation between the two effects is, therefore, critical for research on interactions at aqueous interfaces. Here, we investigate the graphite-water interface, which is a widely used model system where the solid-water attraction is often considered to be negligible. Similar to previous studies, we observe hydration layers using three-dimensional atomic force microscopy at the graphite-water interface. We explain why the confinement could cause the formation of hydration layers even in the absence of attraction between surface and water by employing Monte Carlo simulations. Using additional molecular dynamics simulations, we continue to show that at ambient conditions, however, the confinement alone does not cause the formation of layers at the graphite-water interface. We thereby demonstrate that there is a significant graphite-water attraction. read less USED (high confidence) A. Sharifian, M. Baghani, G. Odegard, J. Wu, A. V. van Duin, and M. Baniassadi, “How to characterize interfacial load transfer in spiral carbon-based nanostructure-reinforced nanocomposites: is this a geometry-dependent process?,” Physical chemistry chemical physics : PCCP. 2019. link Times cited: 5 Abstract: There is a great deal of attention given to spiral carbon-ba… read moreAbstract: There is a great deal of attention given to spiral carbon-based nanostructures (SCBNs) because of their unique mechanical, thermal and electrical properties along with fascinating morphology. Dispersing SCBNs inside a polymer matrix leads to extraordinary properties of nanocomposites in diverse fields. However, the role of the interfacial mechanical properties of these nanocomposites remains unknown. Here, using molecular dynamics simulations, the characteristics of interfacial load transfer of SCBN-polyethylene nanocomposites are explored. Considering the geometric characteristics of SCBNs, new insight into the separation behavior of nanoparticles in normal and sliding modes is addressed. Interestingly, the results show that the maximum force and the separation energy of the SCBNs are much larger than those of graphene because of interlocking of the coils and polymer. The heavy influence of changes in the geometric characteristics of SCBNs on the separation behavior is observed. Pullout tests reveal that the influence of parameters such as the length and number of polyethylene chains, temperature, and functionalization of the SCBNs on the interfacial mechanical properties is also significant. This study sheds new light in understanding the crucial effect of the interaction of SCBNs with polymer chains on the interfacial mechanical properties, which can lead to better performance of nanocomposites. read less USED (high confidence) M. Chen, L. Hu, A. Ramasubramaniam, and D. Maroudas, “Effects of pore morphology and pore edge termination on the mechanical behavior of graphene nanomeshes,” Journal of Applied Physics. 2019. link Times cited: 8 Abstract: We report results of a systematic computational study on the… read moreAbstract: We report results of a systematic computational study on the mechanical response of graphene nanomeshes (GNMs) to uniaxial tensile straining based on molecular-dynamics simulations of dynamic deformation tests according to a reliable bond-order interatomic potential. We examine the effects on the GNM mechanical behavior under straining along different directions of the nanomesh pore morphology and pore edge passivation by testing GNMs with elliptical pores of various aspect ratios and different extents of edge passivation through termination with H atoms of under-coordinated edge C atoms. We establish the dependences of the ultimate tensile strength, fracture strain, and toughness of the GNMs on the nanomesh porosity, derive scaling laws for GNM strength-density relations, and find the GNMs' mechanical response to uniaxial straining to be anisotropic for pore morphologies deviating from circular pores. We also find that the GNM tensile strength decays exponentially with increasing GNM porosity and that pore edge termination with H atoms causes a reduction in the GNMs' elastic stiffening, strength, deformability, and toughness; this hydrogen embrittlement effect is more pronounced at a high level of pore edge passivation that renders the edge C atoms sp3-hybridized. The underlying mechanisms of crack initiation and propagation and nanomesh failure for the various types of GNMs examined also are characterized in atomistic detail. Overall, even highly porous GNMs remain particularly strong and deformable and, therefore, constitute very promising 2D mechanical metamaterials.We report results of a systematic computational study on the mechanical response of graphene nanomeshes (GNMs) to uniaxial tensile straining based on molecular-dynamics simulations of dynamic deformation tests according to a reliable bond-order interatomic potential. We examine the effects on the GNM mechanical behavior under straining along different directions of the nanomesh pore morphology and pore edge passivation by testing GNMs with elliptical pores of various aspect ratios and different extents of edge passivation through termination with H atoms of under-coordinated edge C atoms. We establish the dependences of the ultimate tensile strength, fracture strain, and toughness of the GNMs on the nanomesh porosity, derive scaling laws for GNM strength-density relations, and find the GNMs' mechanical response to uniaxial straining to be anisotropic for pore morphologies deviating from circular pores. We also find that the GNM tensile strength decays exponentially with increasing GNM porosity and that po... read less USED (high confidence) L. Li, Z. Xia, Y.-qing Yang, and M. Yuan, “Atomistic simulations on nanoimprinting of copper by aligned carbon nanotube arrays under a high-frequency mechanical vibration,” Nanotechnology. 2019. link Times cited: 3 Abstract: Nanoimprinting behaviors of copper substrates and double-wal… read moreAbstract: Nanoimprinting behaviors of copper substrates and double-walled carbon nanotubes with interwall sp 3 bonds are investigated using molecular dynamics simulations. A high-frequency mechanical vibration with various amplitudes is applied on the carbon nanotube (CNT) mold and copper substrate in different directions. Results show that exciting mechanical resonances both on the CNT and substrate drastically decrease the maximum imprint force and interfacial friction up to 50% under certain amplitudes. Meanwhile, it is demonstrated that defects occur in the {111} plane in the copper substrate during nanoimprinting. For different CNT array densities, a higher grafting density needs more imprint force to transfer patterns. The maximum imprint force for a large range of CNT array densities can be reduced by vibrational perturbations, while reduction rates depend on the CNT grafting density. This work sheds deep insights into the nanoimprint process at the atomic level, suggesting that vibration perturbation is an effective approach for improving the nanoimprinting accuracy and preventing the fracture of nanopatterns. read less USED (high confidence) H.-H. Lin, A. Croy, R. Gutierrez, C. Joachim, and G. Cuniberti, “Mechanical Transmission of Rotational Motion between Molecular-Scale Gears,” Physical Review Applied. 2019. link Times cited: 10 Abstract: Manipulating and coupling molecule gears is the first step t… read moreAbstract: Manipulating and coupling molecule gears is the first step towards realizing molecular-scale mechanical machines. Here, we theoretically investigate the behavior of such gears using molecular dynamics simulations. Within a nearly rigid-body approximation we reduce the dynamics of the gears to the rotational motion around the orientation vector. This allows us to study their behavior based on a few collective variables. Specifically, for a single hexa (4-tert-butylphenyl) benzene molecule we show that the rotational-angle dynamics corresponds to the one of a Brownian rotor. For two such coupled gears, we extract the effective interaction potential and find that it is strongly dependent on the center of mass distance. Finally, we study the collective motion of a train of gears. We demonstrate the existence of three different regimes depending on the magnitude of the driving-torque of the first gear: underdriving, driving and overdriving, which correspond, respectively, to no collective rotation, collective rotation and only single gear rotation. This behavior can be understood in terms of a simplified interaction potential. read less USED (high confidence) H. Li, M. Li, F. Li, and Z. Kang, “Compression-driven collapse of nanotubes,” Nanotechnology. 2019. link Times cited: 1 Abstract: Nanotubes are prone to collapsing under compression due to t… read moreAbstract: Nanotubes are prone to collapsing under compression due to the competition between the bending stiffness of the walls and the van der Waals interactions. The different radial morphologies during collapse may affect the electrical properties of nanotube, which may find promising potential applications in strain engineering. In this paper, the finite-deformation model is introduced to determine the radial morphologies, energy barrier and radial deformability of a nanotube under compression, in which the adhesion interactions are analytically obtained. The analytical solutions of the radial morphologies during compression are consistent with the molecular dynamics simulations results, indicating the effectiveness of the finite-deformation model. The analytical results reveal that both the energy barrier and the radial deformability show a decreasing tendency with the increase of the nanotube diameter. read less USED (high confidence) D. Liang, Z. Fu, and Z. Xu, “A three-stage rotary transmission nanobearing driven by a gigahertz nanomotor,” AIP Advances. 2019. link Times cited: 3 Abstract: In a transmission system, the rotational speed of the output… read moreAbstract: In a transmission system, the rotational speed of the output can be adjusted by the system. In this study, we introduce a three-stage rotational transmission nanosystem model that uses carbon nanotubes with excellent mechanical properties to fabricate coaxially distributed nanomotors with three nanobearings. Driven by a gigahertz nanomotor at 300 K, the nanobearings are changed to adjust the output rotational frequency. In view of the differences in chirality and radius of the carbon nanotubes, 17 transmission models are established and tested by molecular dynamics simulation. The rotor’s rotational transmission ratio curves show the dynamic response of the transmission system. A better down-converting transmission system can be obtained when the radius of the rotating component is between 0.58nm and 0.88nm or the difference in radii between the rotating components is greater than 0.2 nm. From the results obtained by molecular dynamics simulation, some key points are demonstrated for future deceleration of the rotary nanomotor.In a transmission system, the rotational speed of the output can be adjusted by the system. In this study, we introduce a three-stage rotational transmission nanosystem model that uses carbon nanotubes with excellent mechanical properties to fabricate coaxially distributed nanomotors with three nanobearings. Driven by a gigahertz nanomotor at 300 K, the nanobearings are changed to adjust the output rotational frequency. In view of the differences in chirality and radius of the carbon nanotubes, 17 transmission models are established and tested by molecular dynamics simulation. The rotor’s rotational transmission ratio curves show the dynamic response of the transmission system. A better down-converting transmission system can be obtained when the radius of the rotating component is between 0.58nm and 0.88nm or the difference in radii between the rotating components is greater than 0.2 nm. From the results obtained by molecular dynamics simulation, some key points are demonstrated for future deceleration o... read less USED (high confidence) Y. Nie, H. Zhan, Z. Zheng, A. Bo, E. Pickering, and Y. T. Gu, “How Gaseous Environment Influences a Carbon Nanotube-Based Mechanical Resonator,” The Journal of Physical Chemistry C. 2019. link Times cited: 5 Abstract: Nanoscale mechanical resonator-based nanoelectromechanical s… read moreAbstract: Nanoscale mechanical resonator-based nanoelectromechanical systems have been reported with ultrahigh sensitivity, which are normally acquired from an ultravacuum environment at cryostat temperature. To facilitate their practical applications for gas sensing or bio-detection, it is critical to understand how the fluid (gas or liquid) environment will impact the resonance behaviors of the nanoresonator. This work reports a first-time comprehensive investigation on the influence of the N2 gaseous environment on the resonance properties of carbon nanotube (CNT)-based mechanical resonator, through a combination of grand canonical Monte Carlo and large-scale molecular dynamics simulations. It is shown that the gaseous environment exerts a significant effect on the resonance properties of the CNT resonator through a dynamic desorption and readsorption process. Under the temperature of 100 K and the pressure of 1 bar, the displacement amplitude of the CNT resonator is found to experience a sharp reduction of abou... read less USED (high confidence) M. Slepchenkov, D. Shmygin, G. Zhang, and O. Glukhova, “Controlling the electronic properties of 2D/3D pillared graphene and glass-like carbon via metal atom doping.,” Nanoscale. 2019. link Times cited: 8 Abstract: We present the results of investigation of the nanopore fill… read moreAbstract: We present the results of investigation of the nanopore filling of planar layered and bulk pillared graphene (PGR) as well as films and 3D samples of glass-like porous carbon (GLC) with potassium atoms. The patterns of charge transfer, electronic structure, and shift of the Fermi level during the filling of nanopores with potassium atoms are established. It is found that the greatest charge transfer from potassium atoms to the carbon framework is observed in PGR with a density of 1.1-1.4 g cm-3 (that is, with a nanopore volume of 1300-1800 nm3) regardless of the framework topology. The maximum charge transfer occurs already when the mass fraction of potassium is 12 wt%. At the same potassium concentration, a maximum shift of the Fermi level to zero by ∼3 eV occurs in a bilayer PGR film with a density of 1.4 g cm-3. Thus, our work shows for the first time that the electronic properties of nanoporous materials doped with alkaline earth metals (in particular, potassium) can be controlled by varying the volume of doped nanopores, i.e. by controlling the density of the nanoporous material. We first demonstrated that the potassium doping of PGR would be more effective than potassium doping of GLC. It is established that 2D samples of PGR and GLC completely reproduce the electronic properties of the bulk samples and even surpass them in some parameters. To carry out research, we developed a new method for nanopore filling with dopant atoms based on both the randomness of the nanopore filling and the energy advantage of this process. This method allows us to reliably determine the maximum possible mass fraction (wt%) of dopant atoms of any porous material. read less USED (high confidence) B. Song, J. Shi, C. Hu, J. Wang, K. Cai, and C. Zhang, “Recoverability of a gigahertz rotation-translation nanoconvertor with hydrogenated deformable rotor at room temperature,” Nanotechnology. 2019. link Times cited: 4 Abstract: To design a rotor with recoverable deformation for conversio… read moreAbstract: To design a rotor with recoverable deformation for conversion between rotation and translation in a nanodevice, an internally hydrogenated deformable part (HDP) was introduced in the carbon nanotube-based rotor. Initially, under van der Waals (vdW) force, the hydrogenated areas on the HDP curved toward the rotating axis. When a rotational frequency was exerted on the rotor, the hydrogenated parts on the HDP were separated under strong centrifugal force. Translational motion of the free edge of the rotor was generated synchronously during deformation of the HDP. Once removing the input rotation, the rotor would stop rotating by friction from the stators, and the HDP shrank back by strong vdW force but weakening centrifugal force. Hence, the nanoconvertor has recoverability, which was verified by molecular dynamics simulations with considering the effects of hydrogenation schemes and input rotational frequency at room temperature. Conclusions were drawn for a design of a nanodevice based on the present rotation-translation nanoconvertor model. read less USED (high confidence) A. Lohrasebi and T. Koslowski, “Modeling water purification by an aquaporin-inspired graphene-based nano-channel,” Journal of Molecular Modeling. 2019. link Times cited: 12 USED (high confidence) E. Iakovlev, P. Zhilyaev, and I. Akhatov, “Modeling of the phase transition inside graphene nanobubbles filled with ethane.,” Physical chemistry chemical physics : PCCP. 2019. link Times cited: 5 Abstract: Graphene nanobubbles consist of a substance that is trapped … read moreAbstract: Graphene nanobubbles consist of a substance that is trapped between graphene sheets and atomically flat substrates. This substance is an example of confinement in which both the bulk and surface interactions and the tension of the graphene determine the mechanical and thermodynamic properties of the system. The van der Waals pressure build up due to the graphene-substrate attraction and surface influence facilitates the advanced condensation of trapped substances. Different phases of the trapped substance are assumed to be found inside the graphene nanobubbles depending on their radii. Smaller radii are attributed to the crystal and liquid phases, and larger radii correspond to the gas phase. In this study, graphene nanobubbles filled with ethane on a graphite substrate are investigated. The choice of trapped substance is inspired by typical experiments in which graphene nanobubbles are obtained with a mixture of hydrocarbons inside. We apply a multiscale model based on both molecular dynamics simulations and a continuum 1D model to obtain the shape of the bubble, stress distribution and phase state of the trapped substance. Calculations are performed for a set of temperatures below and above the critical temperature of ethane. A liquid-gas phase transition below the critical temperature leads to a 'forbidden range' of radii, in which no stable bubbles exist. read less USED (high confidence) X. Lin and Q. Han, “Defect-driven rotating system based on a double-walled carbon nanotube and graphene,” Journal of Molecular Modeling. 2019. link Times cited: 5 USED (high confidence) P. He et al., “A Grain Boundary Regulates the Friction Behaviors between Graphene and a Gold Substrate,” Crystals. 2019. link Times cited: 7 Abstract: The nanofriction of graphene is critical for its broad appli… read moreAbstract: The nanofriction of graphene is critical for its broad applications as a lubricant and in flexible electronics. Herein, using a Au substrate as an example, we have investigated the effect of the grain boundary on the nanofriction of graphene by means of molecular dynamics simulations. We have systematically examined the coupling effects of the grain boundary with different mechanical pressures, velocities, temperatures, contact areas, and relative rotation angles on nanofriction. It is revealed that grain boundaries could reduce the friction between graphene and the gold substrate with a small deformation of the latter. Large lateral forces were observed under severe deformation around the grain boundary. The fluctuation of lateral forces was bigger on surfaces with grain boundaries than that on single-crystal surfaces. Friction forces induced by the armchair grain boundaries was smaller than those by the zigzag grain boundaries. read less USED (high confidence) Y. Zhao, X. Liu, J. Zhu, and S. Luo, “Unusually high flexibility of graphene-Cu nanolayered composites under bending.,” Physical chemistry chemical physics : PCCP. 2019. link Times cited: 7 Abstract: The mechanical properties of graphene-Cu nanolayered (GCuNL)… read moreAbstract: The mechanical properties of graphene-Cu nanolayered (GCuNL) composites under bend loading are investigated via an energy-based analytical model and molecular dynamics (MD) simulations. For an anisotropic material, if it has a weak strength in a certain direction, improving the mechanical properties along this direction is normally difficult for its composites. Here, we find that the flexibility of GCuNL composites can be improved considerably by graphene interfaces, despite graphene's small bending stiffness. The graphene interfaces can delocalize slip bands in the inner Cu layers of GCuNL composites, and impede local nucleation of dislocations, thus greatly increasing the yield and failure bend angles. As the thickness decreases, the flexibility of GCuNL nanofilms increases. However, the GCuNL nanofilms are thermodynamically unstable due to interface instability when the repeat layer spacing is less than 2 nm. The energy-based analytical model for large deformation can accurately characterize the bending response of GCuNL nanofilms. read less USED (high confidence) P. Wu, J. Shi, J. Wang, J. Shen, and K. Cai, “Critical Output Torque of a GHz CNT-Based Rotation Transmission System Via Axial Interface Friction at Low Temperature,” International Journal of Molecular Sciences. 2019. link Times cited: 4 Abstract: It was discovered that a sudden jump of the output torque mo… read moreAbstract: It was discovered that a sudden jump of the output torque moment from a rotation transmission nanosystem made from carbon nanotubes (CNTs) occurred when decreasing the system temperature. In the nanosystem from coaxial-layout CNTs, the motor with specified rotational frequency (ωM) can drive the inner tube (rotor) to rotate in the outer tubes. When the axial gap between the motor and the rotor was fixed, the friction between their neighbor edges was stronger at a lower temperature. Especially at temperatures below 100 K, the friction-induced driving torque increases with ωM. When the rotor was subjected to an external resistant torque moment (Mr), it could not rotate opposite to the motor even if it deformed heavily. Combining molecular dynamics simulations with the bi-sectioning algorithm, the critical value of Mr was obtained. Under the critical torque moment, the rotor stopped rotating. Accordingly, a transmission nanosystem can be designed to provide a strong torque moment via interface friction at low temperature. read less USED (high confidence) R. R. D. Grande, A. F. Fonseca, and R. Capaz, “Energy barriers for collapsing large-diameter carbon nanotubes,” Carbon. 2019. link Times cited: 9 USED (high confidence) X. Zhang et al., “Theoretical strength and rubber-like behaviour in micro-sized pyrolytic carbon,” Nature Nanotechnology. 2019. link Times cited: 70 USED (high confidence) M. R. Vazirisereshk et al., “Origin of Nanoscale Friction Contrast between Supported Graphene, MoS2, and a Graphene/MoS2 Heterostructure.,” Nano letters. 2019. link Times cited: 90 Abstract: Ultra-low friction can be achieved with 2D materials, partic… read moreAbstract: Ultra-low friction can be achieved with 2D materials, particularly graphene and MoS2. The nanotribological properties of these different 2D materials have been measured in previous atomic force microscope (AFM) experiments sequentially, precluding immediate and direct comparison of their frictional behavior. Here, friction is characterized at the nanoscale using AFM experiments with the same tip sliding over graphene, MoS2, and a graphene/MoS2 heterostructure in a single measurement, repeated hundreds of times, and also measured with a slowly varying normal force. The same material systems are simulated using molecular dynamics (MD) and analyzed using density-functional theory (DFT) calculations. In both experiments and MD simulations, graphene consistently exhibits lower friction than the MoS2 monolayer and the heterostructure. In some cases, friction on the heterostructure is lower than that on the MoS2 monolayer. Quasi-static MD simulations and DFT calculations show that the origin of the friction contrast is the difference in energy barriers for a tip sliding across each of the three surfaces. read less USED (high confidence) X. Xiao, S. Fan, C. Li, and W. Xing, “Stress-Insensitive Resonant Graphene Mass Sensing via Frequency Ratio,” Sensors (Basel, Switzerland). 2019. link Times cited: 12 Abstract: Herein, a peripherally clamped stretched square monolayer gr… read moreAbstract: Herein, a peripherally clamped stretched square monolayer graphene sheet with a side length of 10 nm was demonstrated as a resonator for atomic-scale mass sensing via molecular dynamics (MD) simulation. Then, a novel method of mass determination using the first three resonant modes (mode11, mode21 and mode22) was developed to avoid the disturbance of stress fluctuation in graphene. MD simulation results indicate that improving the prestress in stretched graphene increases the sensitivity significantly. Unfortunately, it is difficult to determine the mass accurately by the stress-reliant fundamental frequency shift. However, the absorbed mass in the middle of graphene sheets decreases the resonant frequency of mode11 dramatically while having negligible effect on that of mode21 and mode22, which implies that the latter two frequency modes are appropriate for compensating the stress-induced frequency shift of mode11. Hence, the absorbed mass, with a resolution of 3.3 × 10−22 g, is found using the frequency ratio of mode11 to mode21 or mode22, despite the unstable prestress ranging from 32 GPa to 47 GPa. This stress insensitivity contributes to the applicability of the graphene-based resonant mass sensor in real applications. read less USED (high confidence) A. AlAsqalani and A. Sedky, “Deformation and fracture behavior of bicrystal graphene: an atomic level simulation,” Arab Journal of Nuclear Sciences and Applications. 2019. link Times cited: 1 Abstract: In this study, extensive molecular dynamics simulations were… read moreAbstract: In this study, extensive molecular dynamics simulations were carried out to investigate failure processes along different symmetric tilt grain boundaries (STGB) of bicrystal graphene sheet. Two different types of STGBs graphene mainly zigzag and arm-chair types were investigated. The dependence of fracture strength, strain as well as Young’s moduli on different STGBs were examined. The results clearly show that pristine graphene has the highest values of fracture strength and strain to fracture. Furthermore, bicrystal graphene with zigzag-oriented grain boundaries have improved mechanical properties in comparison to those with arm-chair oriented grain boundaries. Fracture behavior was investigated by applying mode I loadings to the outer boundary of bicrystalline graphene sheet with several misorientation angles. The critical stress intensity factors (SIFs) are calculated as a function of displacement were determined by using crack-tip opening displacements (CTOD) at the incipient bond breaking. The atomistic results show that the crack propagation along armchair-orientation grain boundaries are faster than that of zigzag-orientation grain boundaries of bicrystal graphene. read less USED (high confidence) S. P. Patil and Y. Heider, “A Review on Brittle Fracture Nanomechanics by All-Atom Simulations,” Nanomaterials. 2019. link Times cited: 21 Abstract: Despite a wide range of current and potential applications, … read moreAbstract: Despite a wide range of current and potential applications, one primary concern of brittle materials is their sudden and swift collapse. This failure phenomenon exhibits an inability of the materials to sustain tension stresses in a predictable and reliable manner. However, advances in the field of fracture mechanics, especially at the nanoscale, have contributed to the understanding of the material response and failure nature to predict most of the potential dangers. In the following contribution, a comprehensive review is carried out on molecular dynamics (MD) simulations of brittle fracture, wherein the method provides new data and exciting insights into fracture mechanism that cannot be obtained easily from theories or experiments on other scales. In the present review, an abstract introduction to MD simulations, advantages, current limitations and their applications to a range of brittle fracture problems are presented. Additionally, a brief discussion highlights the theoretical background of the macroscopic techniques, such as Griffith’s criterion, crack tip opening displacement, J-integral and other criteria that can be linked to the fracture mechanical properties at the nanoscale. The main focus of the review is on the recent advances in fracture analysis of highly brittle materials, such as carbon nanotubes, graphene, silicon carbide, amorphous silica, calcium carbonate and silica aerogel at the nanoscale. These materials are presented here due to their extraordinary mechanical properties and a wide scope of applications. The underlying review grants a more extensive unravelling of the fracture behaviour and mechanical properties at the nanoscale of brittle materials. read less USED (high confidence) K. Lin and Y.-pu Zhao, “Mechanical peeling of van der Waals heterostructures: Theory and simulations,” Extreme Mechanics Letters. 2019. link Times cited: 27 USED (high confidence) E. Martinez et al., “Parallel replica dynamics simulations of reactions in shock compressed liquid benzene.,” The Journal of chemical physics. 2019. link Times cited: 9 Abstract: The study of the long-term evolution of slow chemical reacti… read moreAbstract: The study of the long-term evolution of slow chemical reactions is challenging because quantum-based reactive molecular dynamics simulation times are typically limited to hundreds of picoseconds. Here, the extended Lagrangian Born-Oppenheimer molecular dynamics formalism is used in conjunction with parallel replica dynamics to obtain an accurate tool to describe the long-term chemical dynamics of shock-compressed benzene. Langevin dynamics has been employed at different temperatures to calculate the first reaction times in liquid benzene at pressures and temperatures consistent with its unreacted Hugoniot. Our coupled engine runs for times on the order of nanoseconds (one to two orders of magnitude longer than traditional techniques) and is capable of detecting reactions that are characterized by rates significantly slower than we could study before. At lower pressures and temperatures, we mainly observe Diels-Alder metastable reactions, whereas at higher pressures and temperatures we observe stable polymerization reactions. read less USED (high confidence) D. Maroudas, A. Muniz, and A. Ramasubramaniam, “Structure-properties relations in graphene derivatives and metamaterials obtained by atomic-scale modeling,” Molecular Simulation. 2019. link Times cited: 6 Abstract: ABSTRACT Recent findings of atomic-scale modelling studies a… read moreAbstract: ABSTRACT Recent findings of atomic-scale modelling studies are reviewed on graphene derivatives and metamaterials fabricated through chemical functionalization and/or defect engineering of graphene sheets. Results of molecular-statics and molecular-dynamics simulations according to a reliable bond-order potential, as well as first-principles density functional theory calculations are reviewed that have established useful structure-properties relations in two-dimensional materials, such as graphene nanomeshes (GNMs), electron-irradiated graphene, and interlayer-bonded twisted bilayer graphene. Quantitative relationships are established for the elastic moduli, mechanical properties, and thermal conductivity of GNMs as a function of the nanomesh porosity and the mechanical response of GNMs to uniaxial tensile straining is explored over the range of nanomesh porosities. The dependence of structural, mechanical, and thermal transport properties of electron-irradiated graphene sheets on the density of irradiation-induced defects is reviewed, highlighting an amorphization transition accompanied by a brittle-to-ductile transition and a transition in thermal transport mechanism beyond a critical defect concentration. The tunability of the electronic band structure, mechanical properties, and structural response to mechanical loading of graphene-diamond nanocomposite superstructures consisting of nanodiamond superlattices in interlayer-bonded twisted bilayer graphene also is demonstrated by precise control of the density and distribution of covalent interlayer C–C bonds. read less USED (high confidence) F. Yousefi, F. Khoeini, and A. Rajabpour, “Thermal conductivity and thermal rectification of nanoporous graphene: A molecular dynamics simulation,” arXiv: Computational Physics. 2019. link Times cited: 53 USED (high confidence) Y. Zhao, Y. Lian, and H. Tan, “Study on the icosahedral fullerene structure with ultra-light and pressure resistance character.,” Physical chemistry chemical physics : PCCP. 2019. link Times cited: 1 Abstract: An ultra-light icosahedral fullerene structure is described … read moreAbstract: An ultra-light icosahedral fullerene structure is described having 12 pentagonal faces at the vertices of the regular icosahedron and 20 triangular faces, which are expanded by hexagonal faces that consist of carbon atoms. When its size exceeds a critical value, the density of the icosahedron becomes lower than that of air. Since the hollow structure deforms under atmospheric pressure, we proposed the addition of helium atoms as a means to obtaining a floatable icosahedral fullerene with pressure-resistant character. According to these requirements, the radius of the midpoint ball of the edge is 493.33 μm; the total density of the helium-filled structure is 0.18 kg m-3; and the buoyancy per cubic meter in the air is 10.88 N. Theoretical calculation and simulation are combined to explore a new approach to ultra-light materials. read less USED (high confidence) S. Doagou‐Rad, J. S. Jensen, A. Islam, and L. Mishnaevsky, “Multiscale molecular dynamics-FE modeling of polymeric nanocomposites reinforced with carbon nanotubes and graphene,” Composite Structures. 2019. link Times cited: 21 USED (high confidence) M. A. Abdol, S. Sadeghzadeh, M. Jalaly, and M. M. Khatibi, “Constructing a three-dimensional graphene structure via bonding layers by ion beam irradiation,” Scientific Reports. 2019. link Times cited: 18 USED (high confidence) N. Liu, M. Becton, L. Zhang, K. Tang, and X. Wang, “Mechanical anisotropy of two-dimensional metamaterials: a computational study,” Nanoscale Advances. 2019. link Times cited: 9 Abstract: Metamaterials, rationally designed multiscale composite syst… read moreAbstract: Metamaterials, rationally designed multiscale composite systems, have attracted extensive interest because of their potential for a broad range of applications due to their unique properties such as negative Poisson's ratio, exceptional mechanical performance, tunable photonic and phononic properties, structural reconfiguration, etc. Though they are dominated by an auxetic structure, the constituents of metamaterials also play an indispensable role in determining their unprecedented properties. In this vein, 2D materials such as graphene, silicene, and phosphorene with superior structural tunability are ideal candidates for constituents of metamaterials. However, the nanostructure–property relationship and composition–property relationship of these 2D material-based metamaterials remain largely unexplored. Mechanical anisotropy inherited from the 2D material constituents, for example, may substantially impact the physical stability and robustness of the corresponding metamaterial systems. Herein, classical molecular dynamics simulations are performed using a generic coarse-grained model to explore the deformation mechanism of these 2D material-based metamaterials with sinusoidally curved ligaments and the effect of mechanical anisotropy on mechanical properties, especially the negative Poisson's ratio. The results indicate that deformation under axial tensile load can be divided into two stages: bending-dominated and stretching-dominated, in which the rotation of junctions in the former stage results in auxetic behavior of the proposed metamaterials. In addition, the auxetic behavior depends heavily on both the amplitude/wavelength ratio of the sinusoidal ligament and the stiffness ratio between axial and transverse directions. The magnitude of negative Poisson's ratio increases from 0 to 0.625, with an associated increase of the amplitude/wavelength ratio from 0 to 0.225, and fluctuates at around 0.625, in good agreement with the literature, with amplitude/wavelength ratios greater than 0.225. More interestingly, the magnitude of negative Poisson's ratio increases from 0.47 to 0.87 with the increase of the stiffness ratio from 0.125 to 8, in good agreement with additional all-atom molecular dynamics simulations for phosphorene and molybdenum disulfide. Overall, these research findings shed light on the deformation mechanism of auxetic metamaterials, providing useful guidelines for designing auxetic 2D lattice structures made of 2D materials that can display a tunable negative Poisson's ratio. read less USED (high confidence) A. Giri and P. Hopkins, “Resonant phonon modes in fullerene functionalized graphene lead to large tunability of thermal conductivity without impacting the mechanical properties,” Journal of Applied Physics. 2019. link Times cited: 13 Abstract: We investigate the effects of fullerene functionalization on… read moreAbstract: We investigate the effects of fullerene functionalization on the thermal transport properties of graphene monolayers via atomistic simulations. Our systematic molecular dynamics simulations reveal that the thermal conductivity of pristine graphene can be lowered by more than an order of magnitude at room temperature (and as much as by ∼93% as compared to the thermal conductivity of pristine graphene) via the introduction of covalently bonded fullerenes on the surface of the graphene sheets. We demonstrate large tunability in the thermal conductivity by the inclusion of covalently bonded fullerene molecules at different periodic inclusions, and we attribute the large reduction in thermal conductivities to a combination of resonant phonon localization effects, leading to band anticrossings and vibrational scattering at the sp3 bonded carbon atoms. The torsional force exerted by the fullerene molecules on the graphene sheets and the number of covalent bonds formed between the two carbon allotropes is shown to significantly affect the heat flow across the hybrid structures, while the size of the fullerene molecules is shown to have a negligible effect on their thermal properties. Moreover, we show that even for a large surface coverage, the mechanical properties of these novel materials are uncompromised. Taken together, our work reveals a unique way to manipulate vibrational thermal transport without the introduction of lattice defects, which could potentially lead to high thermoelectric efficiencies in these materials.We investigate the effects of fullerene functionalization on the thermal transport properties of graphene monolayers via atomistic simulations. Our systematic molecular dynamics simulations reveal that the thermal conductivity of pristine graphene can be lowered by more than an order of magnitude at room temperature (and as much as by ∼93% as compared to the thermal conductivity of pristine graphene) via the introduction of covalently bonded fullerenes on the surface of the graphene sheets. We demonstrate large tunability in the thermal conductivity by the inclusion of covalently bonded fullerene molecules at different periodic inclusions, and we attribute the large reduction in thermal conductivities to a combination of resonant phonon localization effects, leading to band anticrossings and vibrational scattering at the sp3 bonded carbon atoms. The torsional force exerted by the fullerene molecules on the graphene sheets and the number of covalent bonds formed between the two carbon allotropes is shown... read less USED (high confidence) J. Zhang, E. Osloub, F. Siddiqui, W. Zhang, T. Ragab, and C. Basaran, “Anisotropy of Graphene Nanoflake Diamond Interface Frictional Properties,” Materials. 2019. link Times cited: 13 Abstract: Using molecular dynamics (MD) simulations, the frictional pr… read moreAbstract: Using molecular dynamics (MD) simulations, the frictional properties of the interface between graphene nanoflake and single crystalline diamond substrate have been investigated. The equilibrium distance between the graphene nanoflake and the diamond substrate has been evaluated at different temperatures. This study considered the effects of temperature and relative sliding angle between graphene and diamond. The equilibrium distance between graphene and the diamond substrate was between 3.34 Å at 0 K and 3.42 Å at 600 K, and it was close to the interlayer distance of graphite which was 3.35 Å. The friction force between graphene nanoflakes and the diamond substrate exhibited periodic stick-slip motion which is similar to the friction force within a graphene–Au interface. The friction coefficient of the graphene–single crystalline diamond interface was between 0.0042 and 0.0244, depending on the sliding direction and the temperature. Generally, the friction coefficient was lowest when a graphene flake was sliding along its armchair direction and the highest when it was sliding along its zigzag direction. The friction coefficient increased by up to 20% when the temperature rose from 300 K to 600 K, hence a contribution from temperature cannot be neglected. The findings in this study validate the super-lubricity between graphene and diamond and will shed light on understanding the mechanical behavior of graphene nanodevices when using single crystalline diamond as the substrate. read less USED (high confidence) S. Norouzi and M. M. S. Fakhrabadi, “Nanomechanical properties of single- and double-layer graphene spirals: a molecular dynamics simulation,” Applied Physics A. 2019. link Times cited: 14 USED (high confidence) S. Skowron, S. L. Roberts, A. Khlobystov, and E. Besley, “The effects of encapsulation on damage to molecules by electron radiation.,” Micron. 2019. link Times cited: 11 USED (high confidence) C. N. S. Kumar et al., “Nanocrystalline graphene at high temperatures: insight into nanoscale processes,” Nanoscale Advances. 2019. link Times cited: 6 Abstract: During high temperature pyrolysis of polymer thin films, nan… read moreAbstract: During high temperature pyrolysis of polymer thin films, nanocrystalline graphene with a high defect density, active edges and various nanostructures is formed. The catalyst-free synthesis is based on the temperature assisted transformation of a polymer precursor. The processing conditions have a strong influence on the final thin film properties. However, the precise elemental processes that govern the polymer pyrolysis at high temperatures are unknown. By means of time resolved in situ transmission electron microscopy investigations we reveal that the reactivity of defects and unsaturated edges plays an integral role in the structural dynamics. Both mobile and stationary structures with varying size, shape and dynamics have been observed. During high temperature experiments, small graphene fragments (nanoflakes) are highly unstable and tend to lose atoms or small groups of atoms, while adjacent larger domains grow by addition of atoms, indicating an Ostwald-like ripening in these 2D materials, besides the mechanism of lateral merging of nanoflakes with edges. These processes are also observed in low-dose experiments with negligible electron beam influence. Based on energy barrier calculations, we propose several inherent temperature-driven mechanisms of atom rearrangement, partially involving catalyzing unsaturated sites. Our results show that the fundamentally different high temperature behavior and stability of nanocrystalline graphene in contrast to pristine graphene is caused by its reactive nature. The detailed analysis of the observed dynamics provides a pioneering overview of the relevant processes during ncg heating. read less USED (high confidence) S. Norouzi and M. M. S. Fakhrabadi, “Nanomechanical properties of single- and double-layer graphene spirals: a molecular dynamics simulation,” Applied Physics A. 2019. link Times cited: 0 USED (high confidence) M. Ćosić, M. Hadžijojić, R. A. Rymzhanov, S. Petrović, and S. Bellucci, “Investigation of the graphene thermal motion by rainbow scattering,” Carbon. 2019. link Times cited: 5 USED (high confidence) X. Zhao, D. Papageorgiou, L. Zhu, F. Ding, and R. Young, “The strength of mechanically-exfoliated monolayer graphene deformed on a rigid polymer substrate.,” Nanoscale. 2019. link Times cited: 14 Abstract: The deformation and fracture behaviour of one-atom-thick mec… read moreAbstract: The deformation and fracture behaviour of one-atom-thick mechanically exfoliated graphene has been studied in detail. Monolayer graphene flakes with different lengths, widths and shapes were successfully prepared by mechanical exfoliation and deposited onto poly(methyl methacrylate) (PMMA) beams. The fracture behaviour of the monolayer graphene was followed by deforming the PMMA beams. Through in situ Raman mapping at different strain levels, the distributions of strain over the graphene flakes were determined from the shift of the graphene Raman 2D band. The failure mechanisms of the exfoliated graphene were either by flake fracture or failure of the graphene/polymer interface. The fracture of the flakes was observed from the formation of cracks identified from the appearance of lines of zero strain in the strain contour maps. It was found that the strength of the monolayer graphene flakes decreased with increasing flake width. The strength dropped to less than ∼10 GPa for large flakes, thought to be due to the presence of defects. It is shown that a pair of topological defects in monolayer graphene will form a pseudo crack and the effect of such defects upon the strength of monolayer graphene has been modelled using molecular mechanical simulations. read less USED (high confidence) M. Li, Z. Guo, and T. Chang, “Adhesion and stress-enhanced elastocaloric effect in graphene,” Science China Technological Sciences. 2019. link Times cited: 0 USED (high confidence) P. Zhilyaev, E. Iakovlev, and I. Akhatov, “Liquid–gas phase transition of Ar inside graphene nanobubbles on the graphite substrate,” Nanotechnology. 2019. link Times cited: 10 Abstract: Graphene nanobubbles (GNBs) are formed when a substance is t… read moreAbstract: Graphene nanobubbles (GNBs) are formed when a substance is trapped between a graphene sheet (a 2D crystal) and an atomically flat substrate. The physical state of the substance inside GNBs can vary from the gas phase to crystal clusters. In this paper, we present a theoretical description of the gas–liquid phase transition of argon inside GNBs. The energy minimization concept is used to calculate the equilibrium properties of the bubble at constant temperature for a given mass of captured substance. We consider the total energy as a sum of the elastic energy of the graphene sheet, the bulk energy of the inner substance and the energy of adhesion between this substance, the substrate and graphene. The developed model allows us to reveal a correlation between the size of the bubble and the physical state of the substance inside it. A special case of a GNB that consists of argon trapped between a graphene sheet and a graphite substrate is considered. We predict the ‘forbidden range’ of radii, within which no stable GNBs exist, that separates bubble sizes with liquid argon inside from bubble sizes with gaseous argon. The height-to-radius ratio of the bubble is found to be constant for radii greater than 200 nm, which is consistent with experimental observations. The proposed model can be extended to various types of trapped substances and 2D crystals. read less USED (high confidence) D. Tang et al., “Size Effects on the Mechanical Properties of Nanoporous Graphene Networks,” Advanced Functional Materials. 2019. link Times cited: 17 Abstract: It is essential to understand the size scaling effects on th… read moreAbstract: It is essential to understand the size scaling effects on the mechanical properties of graphene networks to realize the potential mechanical applications of graphene assemblies. Here, a “highly dense‐yet‐nanoporous graphene monolith (HPGM)” is used as a model material of graphene networks to investigate the dependence of mechanical properties on the intrinsic interplanar interactions and the extrinsic specimen size effects. The interactions between graphene sheets could be enhanced by heat treatment and the plastic HPGM is transformed into a highly elastic network. A strong size effect is revealed by in situ compression of micro‐ and nanopillars inside electron microscopes. Both the modulus and strength are drastically increased as the specimen size reduces to ≈100 nm, because of the reduced weak links in a small volume. Molecular dynamics simulations reveal the deformation mechanism involving slip‐stick sliding, bending, buckling of graphene sheets, collapsing, and densification of graphene cells. In addition, a size‐dependent brittle‐to‐ductile transition of the HPGM nanopillars is discovered and understood by the competition between volumetric deformation energy and critical dilation energy. read less USED (high confidence) B. Mortazavi, M. Madjet, M. Shahrokhi, S. Ahzi, X. Zhuang, and T. Rabczuk, “Nanoporous graphene: A 2D semiconductor with anisotropic mechanical, optical and thermal conduction properties,” Carbon. 2019. link Times cited: 43 USED (high confidence) D. Damasceno, E. Mesquita, R. Rajapakse, and R. Pavanello, “Atomic-scale finite element modelling of mechanical behaviour of graphene nanoribbons,” International Journal of Mechanics and Materials in Design. 2019. link Times cited: 11 USED (high confidence) H. Li, A. Wang, J. Shi, Y. Liu, and G. Cheng, “Diamond Needles Actuating Triple-Walled Carbon Nanotube to Rotate via Thermal Vibration-Induced Collision,” International Journal of Molecular Sciences. 2019. link Times cited: 2 Abstract: A rotary nanomotor is an essential component of a nanomachin… read moreAbstract: A rotary nanomotor is an essential component of a nanomachine. In the present study, a rotary nanomotor from wedged diamonds and triple-walled nanotubes was proposed with the consideration of boundary effect. The outer tubes and mid-tubes were used as nanobearing to constrain the inner tube. Several wedges of the diamond were placed near the inner tube for driving the inner tube to rotate. At a temperature lower than 300 K, the inner tube as the rotor had a stable rotational frequency (SRF). It is shown that both the rotational direction and the value of SRF of the rotor depended on the temperature and thickness of the diamond wedges. The dependence was investigated via theoretical analysis of the molecular dynamics simulation results. For example, when each diamond wedge had one pair of tip atoms (unsaturated), the rotational direction of the rotor at 100 K was opposite to that at 300 K. At 500 K, the rotating rotor may stop suddenly due to breakage of the diamond needles. Some conclusions are drawn for potential application of such a nanomotor in a nanomachine. read less USED (high confidence) X. Yang, X. Zhang, and B. Cao, “The Effect of Thermal Contact Number on the Tube–Tube Contact Conductance of Single-Walled Carbon Nanotubes,” Nanomaterials. 2019. link Times cited: 4 Abstract: The contact conductance of single, double, and triple therma… read moreAbstract: The contact conductance of single, double, and triple thermal contacts of single-walled carbon nanotubes (SWCNTs) was investigated using molecular dynamics simulations. Our results showed that the effect of the thermal contact number on the contact conductance was not as strong as previously reported. The percentages of contact conductance of double and triple thermal contacts were about 72% and 67%, respectively, compared to that of a single thermal contact. Moreover, we found that the contact conductance of the double and triple thermal contacts was associated with the SWCNT length and the positional relationship of the thermal contacts. read less USED (high confidence) J. Zhang, T. Ragab, and C. Basaran, “Comparison of fracture behavior of defective armchair and zigzag graphene nanoribbons,” International Journal of Damage Mechanics. 2019. link Times cited: 25 Abstract: Molecular dynamics simulations of armchair graphene nanoribb… read moreAbstract: Molecular dynamics simulations of armchair graphene nanoribbons and zigzag graphene nanoribbons with different sizes were performed at room temperature. Double vacancy defects were introduced in each graphene nanoribbon at its center or at its edge. The effect of defect on the mechanical behavior was studied by comparing the stress–strain response and the fracture toughness of each pair of pristine and defective graphene nanoribbon. Results show that the effect of vacancies in zigzag graphene nanoribbon is more profound than in armchair graphene nanoribbon. Also, the effect of double vacancy defect on the ultimate failure stress is greater in zigzag graphene nanoribbons than in armchair graphene nanoribbon due to bond orientation with respect to loading direction. Strength reduction can be as high as 17.5% in armchair graphene nanoribbon with no significant difference between single and double vacancies, while for zigzag graphene nanoribbon, the strength reduction is up to 30% for single vacancy and 43% for double vacancy defects. It is observed that for zigzag graphene nanoribbon with double vacancy at the edge, the direction of the failure plane is oriented at ±30° with respect to the loading direction while it is always perpendicular to the direction of loading in armchair graphene nanoribbon. Results have been verified through studying the fracture toughness parameters in each case as well. read less USED (high confidence) Y. Jin, R. Tao, and Z. Li, “Understanding flow enhancement in graphene‐coated nanochannels,” ELECTROPHORESIS. 2019. link Times cited: 18 Abstract: In this work, we investigate pressure‐driven water flows in … read moreAbstract: In this work, we investigate pressure‐driven water flows in graphene‐coated copper nanochannels through molecular dynamics simulations. It is found that the flow rate in bare copper nanochannel can be significantly enhanced by a factor of 45 when the nanochannel is coated with monolayer graphene. The enhancement factor for the flow rate reaches about 90 when the nanochannel is modified with 3 or more graphene layers. The dipole relaxation time and the hydrogen bond lifetime of interfacial water molecules show that the graphene coating promotes the mobility of water molecules at the interface. The distribution of the potential of mean force and the free energy barriers also confirm that graphene coating reduces the flow resistance and 3 layers of graphene can fully screen the surface effects. The results in this work provide important information for the design of graphene‐based nanofluidic systems for flow enhancement. read less USED (high confidence) Z. Pang, B. Deng, Z. Liu, H. Peng, and Y. Wei, “Defects guided wrinkling in graphene on copper substrate,” Carbon. 2019. link Times cited: 22 USED (high confidence) S. M. Nejad, M. B. Bigdeli, R. Srivastava, and M. Fasano, “Heat Transfer at the Interface of Graphene Nanoribbons with Different Relative Orientations and Gaps,” Energies. 2019. link Times cited: 10 Abstract: Because of their high thermal conductivity, graphene nanorib… read moreAbstract: Because of their high thermal conductivity, graphene nanoribbons (GNRs) can be employed as fillers to enhance the thermal transfer properties of composite materials, such as polymer-based ones. However, when the filler loading is higher than the geometric percolation threshold, the interfacial thermal resistance between adjacent GNRs may significantly limit the overall thermal transfer through a network of fillers. In this article, reverse non-equilibrium molecular dynamics is used to investigate the impact of the relative orientation (i.e., horizontal and vertical overlap, interplanar spacing and angular displacement) of couples of GNRs on their interfacial thermal resistance. Based on the simulation results, we propose an empirical correlation between the thermal resistance at the interface of adjacent GNRs and their main geometrical parameters, namely the normalized projected overlap and average interplanar spacing. The reported correlation can be beneficial for speeding up bottom-up approaches to the multiscale analysis of the thermal properties of composite materials, particularly when thermally conductive fillers create percolating pathways. read less USED (high confidence) Y. Wan et al., “Thermal Transport Engineering in Graphdiyne and Graphdiyne Nanoribbons,” ACS Omega. 2019. link Times cited: 13 Abstract: Understanding the details of thermal transport in graphdiyne… read moreAbstract: Understanding the details of thermal transport in graphdiyne and its nanostructures would help to broaden their applications. On the basis of the molecular dynamics simulations and spectrally decomposed heat current analysis, we show that the high-frequency phonons in graphdiyne can be strongly hindered in nanoribbons because of the boundary scattering. The isotropic transport in graphdiyne can be switched to anisotropic along the armchair and zigzag directions. Adding side chains onto the nanoribbon edges further reduces the thermal conductivity (TC) along both armchair and zigzag directions thanks to the reduction of heat current carried by low-frequency modes, a mechanism that arises from the phonon resonances. The uniaxial tensile strain plays a different role in the TC of graphdiyne, armchair nanoribbons, and zigzag nanoribbons. Tensile strain causes the thermal conductivities of graphdiyne, and armchair nanoribbons increase first and then get reduced, whereas for zigzag nanoribbons, the TC decreases with strain first and reaches to a plateau. The different low-frequency phonon response on strain is the main reason for the different TC behavior. For graphdiyne and armchair nanoribbons, the low-frequency heat current is enhanced gradually first and then get reduced with the increase of strain, while that of zigzag nanoribbons decreases with strain and then increases slightly. The current studies could help us understand the phonon transport in graphdiyne and its nanoribbons, which is useful for their TC engineering. read less USED (high confidence) D. Mandelli, W. Ouyang, O. Hod, and M. Urbakh, “Negative Friction Coefficients in Superlubric Graphite-Hexagonal Boron Nitride Heterojunctions.,” Physical review letters. 2019. link Times cited: 48 Abstract: Negative friction coefficients, where friction is reduced up… read moreAbstract: Negative friction coefficients, where friction is reduced upon increasing normal load, are predicted for superlubric graphite-hexagonal boron nitride heterojunctions. The origin of this counterintuitive behavior lies in the load-induced suppression of the moiré superstructure out-of-plane distortions leading to a less dissipative interfacial dynamics. Thermally induced enhancement of the out-of-plane fluctuations leads to an unusual increase of friction with temperature. The highlighted frictional mechanism is of a general nature and is expected to appear in many layered material heterojunctions. read less USED (high confidence) M. Kargar and A. Lohrasebi, “Water flow modeling through a graphene-based nanochannel: theory and simulation.,” Physical chemistry chemical physics : PCCP. 2019. link Times cited: 21 Abstract: Understanding the behavior of water molecule transport throu… read moreAbstract: Understanding the behavior of water molecule transport through artificial nano-channels is essential in designing novel nanofluidic devices that could be used especially in nanofiltration processes. In this study, using nonequilibrium molecular dynamics (MD) simulations, we simulated the water flow through different graphene-based channels to investigate the influences of some key factors such as the channel thickness and applied pressure on the water flow. It was demonstrated that the water flow was enhanced by increasing the applied pressure and channel thickness. Our results indicated that a third order polynomial curve could describe the variation of the water flow as a function of the channel thickness and the applied pressure. In addition, we improved the hydrodynamics equation used to consider the water flow through nano-channels, by adding two terms to describe the slip effect and the entrance/exit effect, in which the first term increased the water flow rate, while the second term reduced it. This study may be helpful in designing high-performance graphene-based membranes with some practical applications such as desalination. read less USED (high confidence) A. Fox, U. Ray, and T. Li, “Strength of graphene grain boundaries under arbitrary in-plane tension,” Carbon. 2019. link Times cited: 24 USED (high confidence) Y. Zhou, T. Ye, L. Ma, Z.-X. Lu, Z. Yang, and S. Liu, “Investigation on Cf/PyC Interfacial Properties of C/C Composites by the Molecular Dynamics Simulation Method,” Materials. 2019. link Times cited: 4 Abstract: In this paper, a molecular dynamics (MD) simulation model of… read moreAbstract: In this paper, a molecular dynamics (MD) simulation model of carbon-fiber/pyrolytic-carbon (Cf/PyC) interphase in carbon/carbon (C/C) composites manufactured by the chemical vapor phase infiltration (CVI) process was established based on microscopic observation results. By using the MD simulation method, the mechanical properties of the Cf/PyC interphase under tangential shear and a normal tensile load were studied, respectively. Meanwhile, the deformation and failure mechanisms of the interphase were investigated with different sizes of the average length L¯a of fiber surface sheets. The empirical formula of the interfacial modulus and strength with the change of L¯a was obtained as well. The shear properties of the isotropic pyrolysis carbon (IPyC) matrix were also presented by MD simulation. Finally, the mechanical properties obtained by the MD simulation were substituted into the cohesive force model, and a fiber ejection test of the C/C composite was simulated by the finite element analysis (FEA) method. The simulation results were in good agreement with the experimental ones. The MD simulation results show that the shear performance of the Cf/PyC interphase is relatively higher when L¯a is small due to the effects of non-in-plane shear, the barrier between crystals, and long sheet folding. On the other hand, the size of L¯a has no obvious influence on the interfacial normal tensile mechanical properties. read less USED (high confidence) K. Wang, W. Ouyang, W. Cao, M. Ma, and Q. Zheng, “Robust superlubricity by strain engineering.,” Nanoscale. 2019. link Times cited: 47 Abstract: Structural superlubricity, a nearly frictionless state betwe… read moreAbstract: Structural superlubricity, a nearly frictionless state between two contact solid surfaces, has attracted rapidly increasing attention during the past few years. Yet a key problem that limits its promising applications is the high anisotropy of friction which always leads to its failure. Here we study the friction of a graphene flake sliding on top of a graphene substrate using molecular dynamics simulation. The results show that by applying strain on the substrate, biaxial stretching is better than uniaxial stretching in terms of reducing interlayer friction. Importantly, we find that robust superlubricity can be achieved via both biaxial and uniaxial stretching, namely for stretching above a critical strain which has been achieved experimentally, the friction is no longer dependent on the relative orientation mainly due to the complete lattice mismatch. The underlying mechanism is revealed to be the Moiré pattern formed. These findings provide a viable approach for the realization of robust superlubricity through strain engineering. read less USED (high confidence) S. Ye, Y. Cai, X. Liu, X. Yao, and S. Luo, “Crack propagation in graphene monolayer under tear loading.,” Physical chemistry chemical physics : PCCP. 2019. link Times cited: 3 Abstract: Crack propagation in graphene monolayer under tear loading i… read moreAbstract: Crack propagation in graphene monolayer under tear loading is investigated via an energy-based analytical model and molecular dynamics (MD) simulations. The classical mechanics-based model describes steady-state crack propagation velocity as a function of applied stress, lateral dimension and loading geometry, as well as the critical stress and critical size for initiating steady crack propagation. MD simulations reveal that cracks propagate along the zigzag direction but yield different "fracture surface" roughnesses for different loading geometries. MD simulations and the predictions of the analytical model are in excellent agreement. Our findings lead to an improved fundamental understanding of the mode-III crack of monolayer graphene necessary for the design and fabrication of graphene-based devices. read less USED (high confidence) T. E. Cantuário and A. F. Fonseca, “High Performance of Carbon Nanotube Refrigerators,” Annalen der Physik. 2019. link Times cited: 11 Abstract: Vapor‐compression dominates the market for refrigeration dev… read moreAbstract: Vapor‐compression dominates the market for refrigeration devices due to low cost and relatively high efficiency. However, the most efficient vapor refrigerants are either ozone depleting or global warming substances. Solid‐state cooling is a young field of research with promising results toward the development of new, efficient, and environment friendly technology for a new generation of refrigeration devices. One of these methods is based on the so‐called elastocaloric effect (ECE), which consists of a temperature variation of a system in response to the application of adiabatic stresses. Although most of the literature describes the study of ECE solid‐state cooling based on materials undergoing phase‐transitions, a study recently predicted that carbon nanotubes (CNTs) present ECE as large as 30 K for 3% of strain. This motivates research toward the development of nanorefrigerators. As nobody knows the efficiency of such an ECE‐based CNT nanorefrigerator, here, significantly high coefficient of performance values of 4.1 and 6.5, and extracted heat per weight as large as 40 J g−1 are reported for a zigzag CNT nanorefrigerator operating in an Otto‐like thermodynamic cycle. This efficiency is shown to overcome that of some other ECE materials. read less USED (high confidence) C. Yi, L. Y. Zhang, X. Chen, X. Wang, and C. Ke, “Nanomechanical Unfolding of Self-Folded Graphene on Flat Substrate,” Experimental Mechanics. 2019. link Times cited: 3 USED (high confidence) C. Yi, L. Y. Zhang, X. M. Chen, X. Q. Wang, and C. Ke, “Nanomechanical Unfolding of Self-Folded Graphene on Flat Substrate,” Experimental Mechanics. 2019. link Times cited: 0 USED (high confidence) Y. Zhou, W. Jiang, D. Li, and Q. Qin, “Study on Lightweight and Strengthening Effect of Carbon Nanotube in Highly Ordered Nanoporous Nickel: A Molecular Dynamics Study,” Applied Sciences. 2019. link Times cited: 3 Abstract: The mechanical behavior of nanocomposites consisting of high… read moreAbstract: The mechanical behavior of nanocomposites consisting of highly ordered nanoporous nickel (HONN) and its carbon nanotube (CNT)-reinforced composites (CNHONNs) subjected to a high temperature of 900 K is investigated via molecular dynamics (MD) simulations. The study indicates that, out-of-plane mechanical properties of the HONNs are generally superior to its in-plane mechanical properties. Whereas the CNT shows a significant strengthening effect on the out-of-plane mechanical properties of the CNHONN composites. Compared to pure HONNs, through the addition of CNTs from 1.28 wt‰ to 5.22 wt‰, the weight of the composite can be reduced by 5.83‰ to 2.33% while the tensile modulus, tensile strength, compressive modulus and compressive strength can be increased by 2.2% to 8.8%, 1% to 5.1%, 3.6% to 10.2% and 4.9% to 10.7%, respectively. The energy absorption capacity can also be improved due to the existence of CNTs. Furthermore, the MD simulations provide further insights into the deformation mechanism at the atomic scale, including fracture in tension, pore collapse in compression and local changes in lattice structures due to stacking faults. read less USED (high confidence) M. Barsoum et al., “Ripplocations: A universal deformation mechanism in layered solids,” Physical Review Materials. 2019. link Times cited: 43 Abstract: M. W. Barsoum,1,* X. Zhao,2 S. Shanazarov,1 A. Romanchuk,1 S… read moreAbstract: M. W. Barsoum,1,* X. Zhao,2 S. Shanazarov,1 A. Romanchuk,1 S. Koumlis,2 S. J. Pagano,2 L. Lamberson,2,† and G. J. Tucker3,‡ 1Department of Materials Science and Engineering, Drexel University, Philadelphia, Pennsylvania 19104, USA 2Department of Mechanical Engineering, Drexel University, Philadelphia, Pennsylvania 19104, USA 3Department of Mechanical Engineering, Colorado School of Mines, Golden, Colorado 80401, USA read less USED (high confidence) H. Wang, Q. Cao, Q. Peng, and S. Liu, “Atomistic Study of Mechanical Behaviors of Carbon Honeycombs,” Nanomaterials. 2019. link Times cited: 13 Abstract: With an ultralarge surface-to-volume ratio, a recently synth… read moreAbstract: With an ultralarge surface-to-volume ratio, a recently synthesized three-dimensional graphene structure, namely, carbon honeycomb, promises important engineering applications. Herein, we have investigated, via molecular dynamics simulations, its mechanical properties, which are inevitable for its integrity and desirable for any feasible implementations. The uniaxial tension and nanoindentation behaviors are numerically examined. Stress–strain curves manifest a transformation of covalent bonds of hinge atoms when they are stretched in the channel direction. The load–displacement curve in nanoindentation simulation implies the hardness and Young’s modulus to be 50.9 GPa and 461±9 GPa, respectively. Our results might be useful for material and device design for carbon honeycomb-based systems. read less USED (high confidence) P. Wang, Q. Cao, Y. Yan, Y. Nie, S. Liu, and Q. Peng, “Graphene Surface Reinforcement of Iron,” Nanomaterials. 2019. link Times cited: 13 Abstract: Graphene is an ideal material in the reinforcement of metal-… read moreAbstract: Graphene is an ideal material in the reinforcement of metal-matrix composites owing to its outstanding mechanical and physical properties. Herein, we have investigated the surface enhancement of iron via a computational nanoindentation process using molecular dynamics simulations. The findings of our study show that graphene can enhance the critical yield strength, hardness and elastic modulus of the composite to different degrees with the change of the number of graphene layers. In the six tested models, the composite with trilayer graphene on the surface produces the strongest reinforcement, with an increased magnitude of 432.1% and 169.5% in the hardness and elastic modulus, respectively, compared with pure iron. Furthermore, it is revealed that high temperature could weaken the elastic bearing capacity of the graphene, resulting in a decrease on the elastic mechanical properties of the graphene/Fe composite. read less USED (high confidence) S. Chen, Y. Cheng, G. Zhang, and Y. Zhang, “Spontaneous directional motion of water molecules in single-walled carbon nanotubes with a stiffness gradient,” Nanoscale Advances. 2018. link Times cited: 9 Abstract: Controlling water molecular motion at the nanoscale is criti… read moreAbstract: Controlling water molecular motion at the nanoscale is critical for many important applications, such as water splitting to produce hydrogen and oxygen, biological and chemical cell reactions, nanofluidics, drug delivery, water treatment, etc. In this paper, we propose a new nanoscale device based on carbon nanotubes (CNTs) with a stiffness gradient to create a spontaneous directional motion of water molecules, and perform molecular dynamics simulations to analyze its transport characteristics. We find that the (6, 6) CNT possesses an optimal water transport rate. In the thinner CNTs, the water molecules are strongly confined by the CNT wall, resulting in a higher friction force; while in the thicker CNTs, the driving force is lower, and the water molecules tend to form ring-like configurations, resulting in a slower motion. For the (6, 6) CNT, water molecules tend to favor a chain-like configuration, through which the molecules are able to move synergistically along the stiffness gradient, and the transportation efficiency increases with the stiffness gradient but decreases with temperature. Both energetic and kinetic analyses are performed to elucidate this fascinating directional motion. Our work demonstrates a new strategy for controlling water molecular motion at the nanoscale without resorting to any active driving source, such as electric field, temperature or pressure difference. read less USED (high confidence) M. López-Suárez, I. Neri, and R. Rurali, “Interface driven thermal rectification in a graphene–bilayer graphene junction from nonequilibrium molecular dynamics,” Journal of Applied Physics. 2018. link Times cited: 6 Abstract: We report on a series of controlled computational experiment… read moreAbstract: We report on a series of controlled computational experiments based on nonequilibrium molecular dynamics and show that at the nanoscale, the thermal rectification is determined by the thermal boundary resistance, i.e., the thermal resistance of the interface, and cannot be explained without it. In the graphene–bilayer graphene system that we study, the sign of the thermal rectification is opposite to the value predicted from bulk-derived models, i.e., phonons preferentially flow in the opposite direction. This behavior derives from the temperature dependence of the thermal boundary resistance and from the fact that the latter, at the nanoscale, has large relative weight compared to the total thermal resistance. These results outline the importance of properly accounting for the active role of the interface.We report on a series of controlled computational experiments based on nonequilibrium molecular dynamics and show that at the nanoscale, the thermal rectification is determined by the thermal boundary resistance, i.e., the thermal resistance of the interface, and cannot be explained without it. In the graphene–bilayer graphene system that we study, the sign of the thermal rectification is opposite to the value predicted from bulk-derived models, i.e., phonons preferentially flow in the opposite direction. This behavior derives from the temperature dependence of the thermal boundary resistance and from the fact that the latter, at the nanoscale, has large relative weight compared to the total thermal resistance. These results outline the importance of properly accounting for the active role of the interface. read less USED (high confidence) Z. Huo, Z. Guo, J. Leng, and T. Chang, “Nanoindentation of circular multilayer graphene allotropes,” Science China Technological Sciences. 2018. link Times cited: 4 USED (high confidence) Z. Huo, Z. Guo, J. Leng, and T. Chang, “Nanoindentation of circular multilayer graphene allotropes,” Science China Technological Sciences. 2018. link Times cited: 0 USED (high confidence) B. März, K. Jolley, R. Smith, and H. Wu, “Near-surface structure and residual stress in as-machined synthetic graphite,” Materials & Design. 2018. link Times cited: 13 USED (high confidence) Y. Kang, F. Duan, S. Shangguan, Y. Zhang, T. Zhou, and B. Si, “Thermal Transport of Graphene Sheets with Fractal Defects,” Molecules. 2018. link Times cited: 8 Abstract: Graphene combined with fractal structures would probably be … read moreAbstract: Graphene combined with fractal structures would probably be a promising candidate design of an antenna for a wireless communication system. However, the thermal transport properties of fractal graphene, which would influence the properties of wireless communication systems, are unclear. In this paper, the thermal transport properties of graphene with a Sierpinski fractal structure were investigated via the reverse non-equilibrium molecular dynamics simulation method. Simulation results indicated that the thermal conductivity of graphene with fractal defects decreased from 157.62 to 19.60 (W m−1 K−1) as the fractal level increased. Furthermore, visual display and statistical results of fractal graphene atomic heat flux revealed that with fractal levels increasing, the real heat flux paths twisted, and the angle distributions of atomic heat flux vectors enlarged from about (−30°, 30°) to about (−45°, 45°). In fact, the fractal structures decreased the real heat flow areas and extended the real heat flux paths, and enhanced the phonon scattering in the defect edges of the fractal graphene. Analyses of fractal graphene thermal transport characters in our work indicated that the heat transfer properties of fractal graphene dropped greatly as fractal levels increased, which would provide effective guidance to the design of antennae based on fractal graphene. read less USED (high confidence) M. Dewapriya and R. Rajapakse, “MD Simulation of Elastic Field at an Inhomogeneity in Graphene,” 2018 4th IEEE International Conference on Emerging Electronics (ICEE). 2018. link Times cited: 1 Abstract: A comprehensive molecular dynamics study is conducted to inv… read moreAbstract: A comprehensive molecular dynamics study is conducted to investigate the elastic field at an atomic inhomogeneity in graphene in the form of a circular hole or a circular boron-nitride inclusion. In addition, the effect on the stress field due to the interaction between an inhomogeneity and a crack is investigated. The results confirm that consideration must be given to the mechanical properties of the resulting system when atomic defects and inclusions are introduced to graphene to tailor optical and electronic properties. read less USED (high confidence) A. Alian and S. Meguid, “Hybrid molecular dynamics–finite element simulations of the elastic behavior of polycrystalline graphene,” International Journal of Mechanics and Materials in Design. 2018. link Times cited: 14 USED (high confidence) Y. He, K. Nomura, R. Kalia, A. Nakano, and P. Vashishta, “Structure and dynamics of water confined in nanoporous carbon,” Physical Review Materials. 2018. link Times cited: 7 Abstract: We study the structure and dynamics of water confined in a n… read moreAbstract: We study the structure and dynamics of water confined in a nanoporous graphitic carbon structure using molecular dynamics (MD) simulations. The carbon structure is generated by a reactive MD simulation of oxidation of a silicon carbide nanoparticle. We embed water molecules in the nanopores and study structural and dynamical properties of nanoconfined water as a function of temperature. MD simulation results indicate the presence of high-density water (HDW) and low-density water (LDW). Radial distribution functions (RDF) and spatial density functions (SDF) indicate that the second solvation shell of the HDW is broken. We calculate the self-diffusion coefficient of confined water molecules as a function of temperature and find a significant decrease in the diffusion of water molecules around T = 190K. The cage correlation function c(t) of confined water molecules at T = 200K exhibits stretched exponential decay, c(t) = exp(-(t/τ)β), with β = 0.43, which matches exactly with the theoretical prediction β = 3/7 . Furthermore, the self-intermediate scattering function at T = 200 K indicates differences in small-scale and large-scale dynamics of water molecules. read less USED (high confidence) F. Meng, M. Ni, F. Chen, J. Song, and D. Wei, “Nanoscale fracture of defective popgraphene monolayer,” bioRxiv. 2018. link Times cited: 6 Abstract: A new carbon allotrope, namely popgraphene, has been recentl… read moreAbstract: A new carbon allotrope, namely popgraphene, has been recently demonstrated to possess high potentials for nanodevice applications. Here, the fracture of defective popgraphene was studied using molecular dynamics simulations and continuum modeling. Three scenarios of defects were considered, including an individual point defect, distributed point defects, and nanocracks. It was found that the fracture stress of popgraphene with an individual point defect was governed by both the geometry of the defect and the critical bond where fracture initiates. Moreover, the fracture stress of popgraphene with distributed point defects was discovered to be inversely proportional to the defect density, showing a nice linear trend. Furthermore, for popgraphene with a nanocrack, it failed in a brittle fashion and exhibited a negligible lattice trapping effect. Griffith criterion was subsequently employed with the consideration of crack deflection to accurately predict the dependence of fracture stress on crack size. The present study lays a mechanistic foundation for nanoscale applications of popgraphene and offers a better understanding of the roles of defects in fracture of low-dimensional materials. read less USED (high confidence) Y. Huang, M. Wu, C.-wei Song, J. Zhang, T. Sun, and L. Jiang, “Simulation and experimental investigations of thermal degradation of polystyrene under femtosecond laser ablation,” Applied Physics A. 2018. link Times cited: 6 USED (high confidence) H. Duan, J. Shi, K. Cai, and Q. Qin, “Thermal Vibration-Induced Rotation of Nano-Wheel: A Molecular Dynamics Study,” International Journal of Molecular Sciences. 2018. link Times cited: 2 Abstract: By bending a straight carbon nanotube and bonding both ends … read moreAbstract: By bending a straight carbon nanotube and bonding both ends of the nanotube, a nanoring (or nano-wheel) is produced. The nanoring system can be driven to rotate by fixed outer nanotubes at room temperature. When placing some atoms at the edge of each outer tube (the stator here) with inwardly radial deviation (IRD), the IRD atoms will repulse the nanoring in their thermally vibration-induced collision and drive the nanoring to rotate when the repulsion due to IRD and the friction with stators induce a non-zero moment about the axis of rotational symmetry of the ring. As such, the nanoring can act as a wheel in a nanovehicle. When the repulsion is balanced with the intertubular friction, a stable rotational frequency (SRF) of the rotor is achieved. The results from the molecular dynamics simulation demonstrate that the nanowheel can work at extremely low temperature and its rotational speed can be adjusted by tuning temperature. read less USED (high confidence) M. Nguyen, “Atomistic Simulation Study of Crack Tip Blunting and the Influence of Blunting Behavior on the Fracture Strength of A Single Layer Graphene Sheet,” 2018 4th International Conference on Green Technology and Sustainable Development (GTSD). 2018. link Times cited: 0 Abstract: The consequence of this result on the fracture behavior of g… read moreAbstract: The consequence of this result on the fracture behavior of graphene, including the crack initiation, crack propagation, blunting, fracture strength and energy release rate is the main topic of this paper. We proposed three mechanisms by which crack growth can occur in such blunted regions and also performed simulations on three different specimens of graphene sheets to demonstrate elastic blunting. For the study of fracture strength of graphene with different crack tip radius, different crack initiation behaviors are revealed, and it is demonstrated that the blunting effect of tip edges plays an important role in the fracture crack initiation and propagation of graphene. The characterized crack tip radius from 1.642 to 2.843 Å is observed, which can be used to estimate the fracture strength due to blunting at crack tip. The results of this work are deemed to be of importance from the perspective of modeling the fracture behavior of graphene sheet and in predicting its ultimate failure, post-blunting in fracture mechanism. read less USED (high confidence) D. Tang et al., “Chirality transitions and transport properties of individual few-walled carbon nanotubes as revealed by in situ TEM probing.,” Ultramicroscopy. 2018. link Times cited: 8 USED (high confidence) J. Huang and Q. Han, “Torsional strain effects on intertube friction in carbon nanotube: strain engineering in friction,” Applied Nanoscience. 2018. link Times cited: 10 USED (high confidence) X. Yuan and Y. Wang, “Adhesion of carbon nanotubes on elastic substrates with finite thickness,” Journal of Applied Physics. 2018. link Times cited: 5 Abstract: How carbon nanotubes (CNTs) interact with substrates is fund… read moreAbstract: How carbon nanotubes (CNTs) interact with substrates is fundamental for understanding their physical properties. In existing theoretical and modeling studies, the substrates are considered to be rigid with semi-infinite thickness. In this work, the effects of finite substrate thickness and elasticity are analyzed theoretically and numerically for free boundary conditions. Based on the energy-variational approach, considering the interfacial van der Waals interactions and bending strain energies stored in CNTs and substrates, the governing equations and boundary conditions are derived analytically. The theoretical predictions are in reasonable agreement with the results of molecular dynamics simulations. When the substrate is sufficiently thick, the results of the present theoretical model are entirely consistent with previous models for the infinite-thickness substrate. However, for relatively thin substrates, the effect of substrate thickness is significant due to the geometric large deformation. Three stable adhesive states (initial non-adhesive, partially adhesive, and fully wrapping states) can be achieved, dependent on the substrate thickness, the number of CNT walls, and the interfacial adhesion work. The stability of adhesive configurations is explored by analyzing the energy variations corresponding to the adhesive deformation. We show that there exist several modes of energy variations, depending on the adhesion work and the substrate-CNT bending stiffness ratio, which exhibit linear and nonlinear influences, respectively. Our results could serve as guidelines to design CNT-on-substrate systems.How carbon nanotubes (CNTs) interact with substrates is fundamental for understanding their physical properties. In existing theoretical and modeling studies, the substrates are considered to be rigid with semi-infinite thickness. In this work, the effects of finite substrate thickness and elasticity are analyzed theoretically and numerically for free boundary conditions. Based on the energy-variational approach, considering the interfacial van der Waals interactions and bending strain energies stored in CNTs and substrates, the governing equations and boundary conditions are derived analytically. The theoretical predictions are in reasonable agreement with the results of molecular dynamics simulations. When the substrate is sufficiently thick, the results of the present theoretical model are entirely consistent with previous models for the infinite-thickness substrate. However, for relatively thin substrates, the effect of substrate thickness is significant due to the geometric large deformation. Three s... read less USED (high confidence) P. Solanky, V. Sharma, K. Ghatak, J. Kashyap, and D. Datta, “The inherent behavior of graphene flakes in water: A molecular dynamics study,” Computational Materials Science. 2018. link Times cited: 11 USED (high confidence) H. Huang et al., “Self-healing mechanism of irradiation defects in nickel–graphene nanocomposite: An energetic and kinetic perspective,” Journal of Alloys and Compounds. 2018. link Times cited: 23 USED (high confidence) X. Li, A. Wang, and K.-R. Lee, “Mechanism of contact pressure-induced friction at the amorphous carbon/alpha olefin interface,” npj Computational Materials. 2018. link Times cited: 43 USED (high confidence) S. I. Kundalwal, K. B. Shingare, and A. Rathi, “Effect of flexoelectricity on the electromechanical response of graphene nanocomposite beam,” International Journal of Mechanics and Materials in Design. 2018. link Times cited: 32 USED (high confidence) S. I. Kundalwal, K. B. Shingare, and A. Rathi, “Effect of flexoelectricity on the electromechanical response of graphene nanocomposite beam,” International Journal of Mechanics and Materials in Design. 2018. link Times cited: 0 USED (high confidence) J. Wang et al., “Wetting Transitions of Liquid Gallium Film on Nanopillar-Decorated Graphene Surfaces,” Molecules : A Journal of Synthetic Chemistry and Natural Product Chemistry. 2018. link Times cited: 8 Abstract: Molecular dynamics (MD) simulation has been employed to stud… read moreAbstract: Molecular dynamics (MD) simulation has been employed to study the wetting transitions of liquid gallium droplet on the graphene surfaces, which are decorated with three types of carbon nanopillars, and to explore the effect of the surface roughness and morphology on the wettability of liquid Ga. The simulation results showed that, at the beginning, the Ga film looks like an upside-down dish on the rough surface, different from that on the smooth graphene surface, and its size is crucial to the final state of liquid. Ga droplets exhibit a Cassie–Baxter (CB) state, a Wenzel state, a Mixed Wetting state, and a dewetting state on the patterned surfaces by changing distribution and the morphology of nanopillars. Top morphology of nanopillars has a direct impact on the wetting transition of liquid Ga. There are three transition states for the two types of carbon nanotube (CNT) substrates and two for the carbon nanocone (CNC) one. Furthermore, we have found that the substrates show high or low adhesion to the Ga droplet with the variation of their roughness and top morphology. With the roughness decreasing, the adhesion energy of the substrate decreases. With the same roughness, the CNC/graphene surface has the lowest adhesion energy, followed by CNT/graphene and capped CNT/graphene surfaces. Our findings provide not only valid support to previous works but also reveal new theories on the wetting model of the metal droplet on the rough substrates. read less USED (high confidence) V. Vijayaraghavan, J. F. Dethan, and L. Gao, “Torsional mechanics of single walled carbon nanotubes with hydrogen for energy storage and fuel cell applications,” Science China Physics, Mechanics & Astronomy. 2018. link Times cited: 7 USED (high confidence) A. Weerasinghe, A. Ramasubramaniam, and D. Maroudas, “Electronic structure of electron-irradiated graphene and effects of hydrogen passivation,” Materials Research Express. 2018. link Times cited: 7 Abstract: We report results for the electronic structure of irradiated… read moreAbstract: We report results for the electronic structure of irradiated and irradiation-induced amorphized graphene based on first-principles density functional theory calculations, using models of irradiated graphene sheets that were initially relaxed structurally according to molecular-dynamics simulations. We find that localized states appear at the Fermi level upon irradiation damage and the corresponding local density of states increases with increasing defect density. Electronic structure calculations show that band flattening occurs due to electron localization in the vicinity of irradiation-induced defects and reduces the charge carrier mobility. This band flattening effect becomes stronger with increasing defect density due to a greater degree of carrier localization at irradiation-induced carbon dangling bonds. Passivating these dangling bonds with hydrogen atoms delocalizes the charge density, reduces the density of states at the Fermi level, and increases the band dispersion. Hydrogen passivation also has the additional effect of quenching any localized magnetic moments at dangling bonds. Our studies show that defect engineering of graphene—even at a gross level without atomic-scale precision—can be employed to tune its properties for additional electronic functionality. read less USED (high confidence) G. Tronci, F. Raffone, and G. Cicero, “Theoretical Study of Nanoporous Graphene Membranes for Natural Gas Purification,” Applied Sciences. 2018. link Times cited: 16 Abstract: Gas filtration by means of membranes is becoming increasingl… read moreAbstract: Gas filtration by means of membranes is becoming increasingly important for industrial processes due to its low cost. In particular, membranes can be applied to separate methane in natural gas from pollutants such as hydrogen sulfide and carbon dioxide. The recent advent of nanoporous graphene as material for membranes helped to overcome the current problems of polymeric membranes, namely the permeability/selectivity tradeoff. However, the factors that determine gas filtration through nanoporous graphene are not completely clear yet. In this work, we show that pore size, shape and functionalization severely affect the selectivity of the membrane toward CO 2 and H 2 S with respect to CH 4 . We identified that the critical diameter of circular pore for the separation of contaminants from methane with graphene membranes is 5.90 Å. An elliptical pore is discovered to select gas species having similar sizes on the basis of their shape. The more elongated CO 2 is allowed to pass though the pore while the more spherical H 2 S and CH 4 are rejected. Finally, the gas-membrane interactions are found to decisively affect the filtration performances. Functionalization with hydroxyl groups led to a higher permeability of the gas species with polar bonds while keeping an excellent selectivity. read less USED (high confidence) M. Rozhkov, A. Kolesnikova, I. Yasnikov, and A. Romanov, “Disclination ensembles in graphene,” Low Temperature Physics. 2018. link Times cited: 7 Abstract: We consider graphene disclination networks (DNs) — periodic … read moreAbstract: We consider graphene disclination networks (DNs) — periodic distributions of disclination defects. Disclinations manifest themselves as 4-, 5-, 7- or 8-member carbon rings in otherwise 6-member ring ideal 2D graphene crystal lattice. Limiting cases of graphene-like 2D carbon lattices without 6-member motives, i.e., pseudographenes, are also studied. The geometry and energy of disclinated 2D carbon configurations are analyzed with the help of molecular dynamics (MD) simulation technique. A comparison of the obtained MD results with analytical calculations within the framework of the theory of defects of elastic continuum is presented.We consider graphene disclination networks (DNs) — periodic distributions of disclination defects. Disclinations manifest themselves as 4-, 5-, 7- or 8-member carbon rings in otherwise 6-member ring ideal 2D graphene crystal lattice. Limiting cases of graphene-like 2D carbon lattices without 6-member motives, i.e., pseudographenes, are also studied. The geometry and energy of disclinated 2D carbon configurations are analyzed with the help of molecular dynamics (MD) simulation technique. A comparison of the obtained MD results with analytical calculations within the framework of the theory of defects of elastic continuum is presented. read less USED (high confidence) K. Xiao, X. Wu, Q. Yin, and C. Huang, “Mechanical behaviour of graphdiyne film: experimental and molecular dynamics simulation.” 2018. link Times cited: 3 Abstract: AFM experiments and molecular dynamics simulation of rectang… read moreAbstract: AFM experiments and molecular dynamics simulation of rectangular graphdiyne films are performed in this paper. The force-deflection curves are obtained, and the elastic modulus is calculated as 218.5 GPa and 482.615 GPa, respectively. The simulated maximum stress and pre-tension of graphdiyne film are 33.088 GPa and 0.551 GPa, respectively. It is observed that the graphdiyne film fractured in the central point once the indentation depth over the critical depth. Also, the obviously elastic behaviour has found during the loading-unloading-reloading process. The deformation mechanisms and fractured behaviour of the graphdiyne film are discussed in detail during the loading process. Moreover, the effects of various factors including loading speed and indenter radii of the graphdiyne film by the MD simulation are discussed. read less USED (high confidence) A. Liu and Q. Peng, “A Molecular Dynamics Study of the Mechanical Properties of Twisted Bilayer Graphene,” Micromachines. 2018. link Times cited: 19 Abstract: Graphene is one of the most important nanomaterials. The twi… read moreAbstract: Graphene is one of the most important nanomaterials. The twisted bilayer graphene shows superior electronic properties compared to graphene. Here, we demonstrate via molecular dynamics simulations that twisted bilayer graphene possesses outstanding mechanical properties. We find that the mechanical strain rate and the presence of cracks have negligible effects on the linear elastic properties, but not the nonlinear mechanical properties, including fracture toughness. The “two-peak” pattern in the stress-strain curves of the bilayer composites of defective and pristine graphene indicates a sequential failure of the two layers. Our study provides a safe-guide for the design and applications of multilayer grapheme-based nanoelectronic devices. read less USED (high confidence) S. Ajori, R. Ansari, R. Hassani, and S. Haghighi, “Structural stability and buckling analysis of a series of carbon nanotorus using molecular dynamics simulations,” Journal of Molecular Modeling. 2018. link Times cited: 1 USED (high confidence) L. Wang, K. Cai, S. Wei, and Y. Xie, “Softening to hardening of stretched diamondene nanotubes.,” Physical chemistry chemical physics : PCCP. 2018. link Times cited: 10 Abstract: Diamondene, a carbon nanomaterial containing both sp2 and sp… read moreAbstract: Diamondene, a carbon nanomaterial containing both sp2 and sp3 carbon atoms, is obtained by compressing two or more layers of graphene. By curving rectangular diamondene and matching the unsaturated C-C bonds on the two unbent edges, a nanotube is built. We build two diamondene nanotubes (DNTs) with different radii and test their strengths under uniaxial tension. From the stress-strain curves, we discover that DNTs exhibit softening followed by hardening. The mechanism is as follows: the bond lengths and bond angles impart different stiffnesses to the tube at different axial strains. Molecular dynamics simulations demonstrate that the feature of the softening-hardening process is independent of either the tube radii or the system temperature. The critical strain for the tensile strength of a DNT becomes lower at a higher temperature. This is caused by thermal vibration of the atoms in the tubes. At the same temperature, for a DNT with a larger radius, the value of critical strain is higher. These properties will be beneficial for the potential applications of DNTs in nanodevices. read less USED (high confidence) E. Braun et al., “Generating carbon schwarzites via zeolite-templating,” Proceedings of the National Academy of Sciences of the United States of America. 2018. link Times cited: 82 Abstract: Significance Nanocarbons can be characterized by their curva… read moreAbstract: Significance Nanocarbons can be characterized by their curvature—that is, positively curved fullerenes, zero-curved graphene, and negatively curved schwarzites. Schwartzites are fascinating materials but have not been synthesized yet, although disordered materials with local properties similar to schwarzites (“random schwarzites”) have been isolated. A promising synthetic method allows for the interior surfaces of zeolites to be templated with sp2 carbon, but theoretical study of these zeolite-templated carbons (ZTCs) has been limited because of their noncrystalline structures. In this work, we develop an improved molecular description of ZTCs, show that they are equivalent to schwartzites, and thus make the experimental discovery of schwarzites ex post facto. Our topological characterization of ZTCs lends insights into how template choice allows for the tunability of ordered microporous carbons. Zeolite-templated carbons (ZTCs) comprise a relatively recent material class synthesized via the chemical vapor deposition of a carbon-containing precursor on a zeolite template, followed by the removal of the template. We have developed a theoretical framework to generate a ZTC model from any given zeolite structure, which we show can successfully predict the structure of known ZTCs. We use our method to generate a library of ZTCs from all known zeolites, to establish criteria for which zeolites can produce experimentally accessible ZTCs, and to identify over 10 ZTCs that have never before been synthesized. We show that ZTCs partition space into two disjoint labyrinths that can be described by a pair of interpenetrating nets. Since such a pair of nets also describes a triply periodic minimal surface (TPMS), our results establish the relationship between ZTCs and schwarzites—carbon materials with negative Gaussian curvature that resemble TPMSs—linking the research topics and demonstrating that schwarzites should no longer be thought of as purely hypothetical materials. read less USED (high confidence) J. Zhang, “Phase transformation in two-dimensional covalent organic frameworks under compressive loading.,” Physical chemistry chemical physics : PCCP. 2018. link Times cited: 9 Abstract: As a new class of two-dimensional (2D) materials, 2D covalen… read moreAbstract: As a new class of two-dimensional (2D) materials, 2D covalent organic frameworks (COFs) are proven to possess remarkable electronic and magnetic properties. However, their mechanical behaviours remain almost unexplored. In this work, taking the recently synthesised dimethylmethylene-bridged triphenylamine (DTPA) sheet as an example, we investigate the mechanical behaviours of 2D COFs based on molecular dynamics simulations together with density functional theory calculations. A novel phase transformation is observed in DTPA sheets when a relatively large in-plane compressive strain is applied to them. Specifically, the crystal structures of the transformed phases are topographically different when the compressive loading is applied in different directions. The compression-induced phase transformation in DTPA sheets is attributed to the buckling of their kagome lattice structures and is found to have significant impacts on their material properties. After the phase transformation, Young's modulus, band gap and thermal conductivity of DTPA sheets are greatly reduced and become strongly anisotropic. Moreover, a large in-plane negative Poisson's ratio is found in the transformed phases of DTPA sheets. It is expected that the results of the compression-induced phase transformation and its influence on the material properties observed in the present DTPA sheets can be further extended to other 2D COFs, since most 2D COFs are found to possess a similar kagome lattice structure. read less USED (high confidence) A. Erturk, M. Kırca, and L. Kırkayak, “Mechanical enhancement of an aluminum layer by graphene coating,” Journal of Materials Research. 2018. link Times cited: 6 Abstract: In this paper, mechanical characteristics of the aluminum la… read moreAbstract: In this paper, mechanical characteristics of the aluminum layer coated with graphene are investigated by performing numerical tensile experiments through classical molecular dynamics simulations. Based on the results of the simulations, it is shown that coating with graphene enhances the Young’s modulus of aluminum by 88% while changing the tensile behavior of aluminum with hardening–softening mechanisms and significantly increased toughness. Furthermore, the effect of loading rate is examined and a transformation to an amorphous phase is observed in the coated aluminum structure as the loading rate is increased. Even though the dominant component of the coated hybrid structure is the aluminum core in the elastic region, the graphene layer shows its effects majorly in the plastic region by a 60% increase in the ultimate tensile strength. High loading rates at room temperature cause the structure transforms to an amorphous phase, as expected. Thus, effects of loading rate and temperature on amorphization are investigated by performing the same simulations at different strain rates and temperatures (i.e., 0, 300, and 600 K). read less USED (high confidence) J. P. Mendez, F. Arca, J. Ramos, M. Ortiz, and M. P. Ariza, “Charge carrier transport across grain boundaries in graphene,” Acta Materialia. 2018. link Times cited: 10 USED (high confidence) S. Bagchi, A. Harpale, and H. Chew, “Interfacial load transfer mechanisms in carbon nanotube-polymer nanocomposites,” Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences. 2018. link Times cited: 8 Abstract: Carbon nanotubes (CNTs) are highly promising for strength re… read moreAbstract: Carbon nanotubes (CNTs) are highly promising for strength reinforcement in polymer nanocomposites, but conflicting interfacial properties have been reported by single nanotube pull-out experiments. Here, we report the interfacial load transfer mechanisms during pull-out of CNTs from PMMA matrices, using massively- parallel molecular dynamics simulations. We show that the pull-out forces associated with non-bonded interactions between CNT and PMMA are generally small, and are weakly-dependent on the embedment length of the nanotube. These pull-out forces do not significantly increase with the presence of Stone Wales or vacancy defects along the nanotube. In contrast, low-density distribution of cross-links along the CNT-PMMA interface increases the pull-out forces by an order of magnitude. At each cross-linked site, mechanical unfolding and pull-out of single or pair polymer chain(s) attached to the individual cross-link bonds result in substantial interfacial strengthening and toughening, while contributing to interfacial slip between CNT and PMMA. Our interfacial shear-slip model shows that the interfacial loads are evenly-distributed among the finite number of cross-link bonds at low cross-link densities or for nanotubes with short embedment lengths. At higher cross-link densities or for nanotubes with longer embedment lengths, a no-slip zone now develops where shear-lag effects become important. Implications of these results, in the context of recent nanotube pull-out experiments, are discussed. read less USED (high confidence) C. Yu et al., “Hot pressing-induced alignment of hexagonal boron nitride in SEBS elastomer for superior thermally conductive composites,” RSC Advances. 2018. link Times cited: 15 Abstract: Styrene–ethylene–butylene–styrene (SEBS) composite films con… read moreAbstract: Styrene–ethylene–butylene–styrene (SEBS) composite films containing well-dispersed and highly aligned hexagonal boron nitride (hBN) platelets were achieved by a ball milling process followed by hot-pressing treatment. An ultrahigh in-plane thermal conductivity of 45 W m−1 K−1 was achievable in the SEBS composite film with 95 wt% hBN. The corresponding out-of-plane thermal conductivity was also as high as 4.4 W m−1 K−1. The hBN/SEBS composite film was further used to cool a CPU connected to a computer, resulting in a decrease by about 4 °C in the stable temperature. Percolation thresholds over 40 wt% and 60 wt% in the hBN/SEBS composites were obtained in the in-plane and out-of-plane directions, respectively. This phenomenon has rarely been reported in polymer composites. Molecular dynamics simulations were also conducted to support this percolation threshold. The linear coefficients of the thermal expansion value of the hBN/SEBS composite with 95 wt% hBN was as low as 16 ppm K−1. This was a significant decrease compared to that of pure SEBS (149 ppm K−1). The proposed strategy provides valuable advice about the heat-transfer mechanism in polymer composites containing oriented two-dimensional materials. read less USED (high confidence) C. Nguyen and A. Beskok, “Saltwater transport through pristine and positively charged graphene membranes.,” The Journal of chemical physics. 2018. link Times cited: 19 Abstract: Transport of saltwater through pristine and positively charg… read moreAbstract: Transport of saltwater through pristine and positively charged single-layer graphene nanoporous membranes is investigated using molecular dynamics simulations. Pressure-driven flows are induced by motion of specular reflecting boundaries at feed and permeate sides with constant speed. Unlike previous studies in the literature, this method induces a desired flow rate and calculates the resulting pressure difference in the reservoirs. Due to the hexagonal structure of graphene, the hydraulic diameters of nano-pores are used to correlate flow rate and pressure drop data. Simulations are performed for three different pore sizes and flow rates for the pristine and charged membrane cases. In order to create better statistical averages for salt rejection rates, ten different initial conditions of Na+ and Cl- distribution in the feed side are used for each simulation case. Using data from 180 distinct simulation cases and utilizing the Buckingham Pi theorem, we develop a functional relationship between the volumetric flow rate, pressure drop, pore diameter, and the dynamic viscosity of saltwater. A linear relationship between the volumetric flow rate and pressure drop is observed. For the same flow rate and pore size, charged membranes exhibit larger pressure drops. Graphene membranes with 9.90 Å pore diameter results in 100% salt rejection with 163.2 l/h cm2 water flux, requiring a pressure drop of 35.02 MPa. read less USED (high confidence) L. Yi, “Temperature dependence bending rigidity of 2D membranes: Graphene as an example,” AIP Advances. 2018. link Times cited: 6 Abstract: Bending rigidity plays an important role in graphene from me… read moreAbstract: Bending rigidity plays an important role in graphene from mechanical behavior to magnetic and electrical properties. However, it is still in a theoretical debate whether the bending rigidity of graphene increase or decrease with increasing temperature. The liquid membranes renormalization theory is always used to calculate the bending modulus of 2D membrane (graphene) at different temperatures. Although this theory has been successfully used to describe the mechanical behavior of liquid membranes like cell membrane, we point out some possible unsuitable places when it is used to evaluate the temperature effect on the bending rigidity of graphene. The energy difference between the notional planar and pure bending graphene is related to the definition of the bending rigidity directly. Based on this energy variation analysis, we demonstrate that the bending rigidity of graphene increases with increasing temperature. Moreover, we reveal the mechanism is that the configurational entropy plays a crucial role in the variation of the free energy of graphene with increasing temperature. Our approach also paves a way to investigate the temperature effect on the bending rigidity of other 2D materials.Bending rigidity plays an important role in graphene from mechanical behavior to magnetic and electrical properties. However, it is still in a theoretical debate whether the bending rigidity of graphene increase or decrease with increasing temperature. The liquid membranes renormalization theory is always used to calculate the bending modulus of 2D membrane (graphene) at different temperatures. Although this theory has been successfully used to describe the mechanical behavior of liquid membranes like cell membrane, we point out some possible unsuitable places when it is used to evaluate the temperature effect on the bending rigidity of graphene. The energy difference between the notional planar and pure bending graphene is related to the definition of the bending rigidity directly. Based on this energy variation analysis, we demonstrate that the bending rigidity of graphene increases with increasing temperature. Moreover, we reveal the mechanism is that the configurational entropy plays a crucial role in... read less USED (high confidence) J. Jose and N. Swaminathan, “Interfacial strength cross-over across silica- and graphite-cis-1,4-polyisoprene interfaces,” Journal of Applied Physics. 2018. link Times cited: 7 Abstract: A cross-over in the interfacial strength, with increase in t… read moreAbstract: A cross-over in the interfacial strength, with increase in the separation rate, is observed between graphite-cis-1,4-polyisoprene and amorphous silica-cis-1,4-polyisoprene interfaces. Molecular dynamics simulations are used to compare the traction-separation characteristics of the two interfaces in the opening mode of separation at various separation rates and temperatures above the glass transition temperature of cis-1,4-polyisoprene. It was observed that various parameters governing the interface strength, such as strength modulus (ratio of peak traction to the separation at peak traction), peak traction, and the work of adhesion are higher for the silica substrated interface at very low separation rates. However, at higher rates, the graphite substrated interface showed higher values for the strength parameters. The reasons for this interface strength cross-over are explained using the potential energy, mobility, entanglement strength, tensile stiffness, and densities of the polymer over both substrates and the interface cohesive binding energy. Based on these observations, it is concluded that silica filled rubber nanocomposites are suitable for normal automobile tire applications; however, graphite fillers may be more suitable for resisting very large impact loads.A cross-over in the interfacial strength, with increase in the separation rate, is observed between graphite-cis-1,4-polyisoprene and amorphous silica-cis-1,4-polyisoprene interfaces. Molecular dynamics simulations are used to compare the traction-separation characteristics of the two interfaces in the opening mode of separation at various separation rates and temperatures above the glass transition temperature of cis-1,4-polyisoprene. It was observed that various parameters governing the interface strength, such as strength modulus (ratio of peak traction to the separation at peak traction), peak traction, and the work of adhesion are higher for the silica substrated interface at very low separation rates. However, at higher rates, the graphite substrated interface showed higher values for the strength parameters. The reasons for this interface strength cross-over are explained using the potential energy, mobility, entanglement strength, tensile stiffness, and densities of the polymer over both substrate... read less USED (high confidence) W. Ouyang, D. Mandelli, M. Urbakh, and O. Hod, “Nanoserpents: Graphene Nanoribbon Motion on Two-Dimensional Hexagonal Materials.,” Nano letters. 2018. link Times cited: 102 Abstract: We demonstrate snake-like motion of graphene nanoribbons ato… read moreAbstract: We demonstrate snake-like motion of graphene nanoribbons atop graphene and hexagonal boron nitride ( h-BN) substrates using fully atomistic nonequilibrium molecular dynamics simulations. The sliding dynamics of the edge-pulled nanoribbons is found to be determined by the interplay between in-plane ribbon elasticity and interfacial lattice mismatch. This results in an unusual dependence of the friction-force on the ribbon's length, exhibiting an initial linear rise that levels-off above a junction-dependent threshold value dictated by the pre-slip stress distribution within the slider. As part of this letter, we present the LAMMPS implementation of the registry-dependent interlayer potentials for graphene, h-BN, and their heterojunctions that were used herein, which provides enhanced performance and accuracy. read less USED (high confidence) S. Rongqi, B. Qingshun, H. Xin, Z. Aimin, and Z. Feihu, “Molecular dynamics simulation of the spreading of the nanosized droplet on a graphene-coated substrate: the effect of the contact line forces,” Molecular Simulation. 2018. link Times cited: 0 Abstract: ABSTRACT Surface characteristics of graphene have an importa… read moreAbstract: ABSTRACT Surface characteristics of graphene have an important impact on its performance. Substantial attention has been devoted to studying the static wetting behaviour of a graphene-coated substrate with little attention to the dynamic wetting behaviour. The impact of contact line forces (CLFs) on the droplet-spreading process has not been revealed completely yet. A series of molecular dynamics (MD) simulation is performed to investigate the spreading process of the water droplet on the graphene-coated substrate in this research. The increase of interaction potential parameter between substrate and water droplet makes the spreading radius getting bigger and the final static contact angle smaller. Apart from that, the higher hydrophilicity of underlying substrate can lead to the greater averaged forces of atoms near contact line. CLFs correlate well with the variation of kinetic energy of water molecules located in the contact line region. Surface tensions of water droplets on graphene-coated substrates are also examined. The liquid-vapour and solid-vapour surface tensions are constant. An increase in the surface tension of liquid-solid lead to the increase of balanced contact angles of water on the substrate. The results are useful for understanding the effect of CLFs on the dissipation of kinetic energy of water molecules. read less USED (high confidence) M. Nikfar and M. Asghari, “A novel model for analysis of multilayer graphene sheets taking into account the interlayer shear effect,” Meccanica. 2018. link Times cited: 1 USED (high confidence) M. Nikfar and M. Asghari, “A novel model for analysis of multilayer graphene sheets taking into account the interlayer shear effect,” Meccanica. 2018. link Times cited: 5 USED (high confidence) Y. Umeno, Y. Yachi, M. Sato, and H. Shima, “On the atomistic energetics of carbon nanotube collapse from AIREBO potential,” Physica E: Low-dimensional Systems and Nanostructures. 2018. link Times cited: 8 USED (high confidence) A. Juneja and G. Rajasekaran, “Anomalous strength characteristics of Stone-Thrower-Wales defects in graphene sheets - a molecular dynamics study.,” Physical chemistry chemical physics : PCCP. 2018. link Times cited: 11 Abstract: Graphene, viz., the one-atom-thick sheet of carbon, exhibits… read moreAbstract: Graphene, viz., the one-atom-thick sheet of carbon, exhibits outstanding mechanical properties, but defects, which are inevitable at the time of synthesis, may strongly affect these properties. In this study, the effects of two types of Stone-Thrower-Wales (namely, STW-1 and STW-2) defects on the mechanical properties of graphene sheets at different temperatures and strain rates were investigated on the basis of molecular dynamics simulations. The authors also investigated the effect of the strain rate and defect concentration on the failure morphology of STW-1 and STW-2 defected graphene sheets. It was observed that, irrespective of the strain rate, the fracture strengths of STW-1 and STW-2 defected graphene sheets are identical in the zigzag and armchair directions, respectively, at low temperatures. It was also observed that the fracture strengths of graphene sheets with STW-1 defects in the armchair direction and STW-2 defects in the zigzag direction decrease drastically at higher temperatures and also at lower strain rates. On the other hand, it was noticed that the fracture strengths of graphene sheets with STW-1 defects in the zigzag direction and STW-2 defects in the armchair direction decrease gradually with an increase in the temperature and a decrease in the strain rate. It was also predicted that the failure morphology of graphene sheets with STW-1 defects in the zigzag direction and STW-2 defects in the armchair direction depends on the defect concentration and the strain rate. read less USED (high confidence) J. Huang and Q. Han, “Mechanism of axial strain effects on friction in carbon nanotube rotating bearings,” Nanotechnology. 2018. link Times cited: 6 Abstract: A systematic study of axial strain effects on friction in ca… read moreAbstract: A systematic study of axial strain effects on friction in carbon nanotube bearings is conducted in this paper. The relationships between friction and axial strains are determined by implementing molecular dynamics simulations. It is found that the dependence of friction on velocity and temperature is altered by axial strains. The mechanism of strain effects is revealed through numerical and theoretical analyses. Based on phonon computations, axial strain effects tune friction by adjusting the distribution of the phonon frequency density, which affects the transfer efficiency of orderly kinetic energy into disorderly thermal energy. The findings in this work advance the understanding of friction in carbon nanotubes and suggest the great potential of axial strain effects on tuning friction in nanodevice applications. read less USED (high confidence) W. Jian, X. Long, M. Tang, Y. Cai, X. Yao, and S. Luo, “Deformation and spallation of shock-loaded graphene: Effects of orientation and grain boundary,” Carbon. 2018. link Times cited: 19 USED (high confidence) K. Xu et al., “Interfacial thermal conductance of buckling carbon nanotubes,” AIP Advances. 2018. link Times cited: 1 Abstract: Bond transition of sp2 to sp3 in carbon nanotube can be real… read moreAbstract: Bond transition of sp2 to sp3 in carbon nanotube can be realized through bending operation at buckling location, which affects the electronic, mechanical and thermal properties of buckled carbon nanotube. In this work, thermal properties of buckled tri-walled carbon nanotube with sp3 bonds are explored using molecular dynamics. Our results reveal that interfacial thermal conductance at buckling location is sensitive to the bending angle, which decreases exponentially with increasing bending angle until 90 degree because of increasing the number of interlayer sp3 bonds. When the bending angle is beyond 90 degree, there are sp3 bonds formed on the outer-tube walls which provide new paths for heat transfer. The insight of mechanism of thermal properties is analyzed by determining atomic micro-heat flux scattering. Our findings provide a flexible and applicable method to design thermal management device. This unusual phenomenon is explained by the micro-heat flux migration and stress distributions. read less USED (high confidence) Z. Z. He, Y. Zhu, and H.-A. Wu, “Self-folding mechanics of graphene tearing and peeling from a substrate,” Frontiers of Physics. 2018. link Times cited: 0 USED (high confidence) Z. Z. He, Y. Zhu, and H. Wu, “Self-folding mechanics of graphene tearing and peeling from a substrate,” Frontiers of Physics. 2018. link Times cited: 17 USED (high confidence) H. Li, M. Li, and Z. Kang, “Mechanics of the scrolling and folding of graphene,” Nanotechnology. 2018. link Times cited: 10 Abstract: The competition between the out-of-plane rigidity and the va… read moreAbstract: The competition between the out-of-plane rigidity and the van der Waals interaction leads to the scrolled and folded structural configurations of graphene. These configuration changes, as compared with the initially planar geometry, significantly affect the electronic, optical and mechanical properties of graphene, promising exciting applications in graphene-nanoelectronics. We propose a finite-deformation theoretical model, in which no presumed assumptions on the geometries of deformed configurations are required. Both the predicted deformed profiles and the critical conditions show great agreements with molecular dynamics simulations results when compared with existing studies with simple geometrical assumptions. Moreover, MD simulations are performed to explore the morphology transitions between different configurations. It is observed that the folded configuration is energetically favorable for a short graphene sheet, while a long graphene sheet tends to scroll. Of particular interest, we observe the morphology transition from a Fermat scroll to the Archimedean scroll for the bi-scrolled graphene. These findings are useful for understanding the stability of graphene and may provide guidance to the design of programmable graphene-nanoelectronics. read less USED (high confidence) Y. Wang and Z. Liu, “Spontaneous rolling-up and assembly of graphene designed by using defects.,” Nanoscale. 2018. link Times cited: 9 Abstract: The inverse Stone-Wales defect is a typical defect in graphe… read moreAbstract: The inverse Stone-Wales defect is a typical defect in graphene, which causes local bumps and local deformation in graphene sheets. Our molecular dynamics simulations show that the spontaneous rolling up of graphene sheets can be induced by orderly distributed inverse Stone-Wales defect bumps, when defective graphene is cut into small strips. This spontaneous process is mainly dominated by the defect density and tailored graphene size. When the tailored length is longer than the upper threshold length, graphene sews up as a curly one-dimensional structure: heart-shaped nanotube. For medium length graphene (the length is in between the lower threshold value and upper threshold value), the results reveal that graphene finally curls into a completely or incompletely stitched nanotube similar to a cylindrical shell. This spontaneous process is produced by a high-frequency damped vibration accompanied by elastic and viscoelastic deformation in defective graphene. Thus, the properties of vibration are further investigated for graphene that has the tailored length shorter than the lower threshold length. This kind of graphene gradually forms a curved nanoribbon rather than a nanotube. It is also found that the bending rigidity of defective graphene is larger than that of pristine graphene. read less USED (high confidence) W. Ouyang, A. S. de Wijn, and M. Urbakh, “Atomic-scale sliding friction on a contaminated surface.,” Nanoscale. 2018. link Times cited: 19 Abstract: Using non-equilibrium molecular dynamic simulations, we inve… read moreAbstract: Using non-equilibrium molecular dynamic simulations, we investigate the effect of adsorbates on nanoscopic friction. We find that the interplay between different channels of energy dissipation at the frictional interface may lead to non-monotonic dependence of the friction force on the adsorbate surface coverage and to strongly nonlinear variation of friction with normal load (non-Amontons' behavior). Our simulations suggest that the key parameter controlling the variation of friction force with the normal load, surface coverage and temperature is the time-averaged number of adsorbates confined between the tip and the substrate. Three different regimes of temperature dependence of friction in the presence of adsorbates are predicted. Our findings point on new ways to control friction on contaminated surfaces. read less USED (high confidence) C. Si et al., “A comprehensive analysis about thermal conductivity of multi-layer graphene with N-doping, -CH3 group, and single vacancy,” Journal of Applied Physics. 2018. link Times cited: 11 Abstract: Graphene has received great attention due to its fascinating… read moreAbstract: Graphene has received great attention due to its fascinating thermal properties. The inevitable defects in graphene, such as single vacancy, doping, and functional group, greatly affect the thermal conductivity. The sole effect of these defects on the thermal conductivity has been widely studied, while the mechanisms of the coupling effects are still open. We studied the combined effect of defects with N-doping, the -CH3 group, and single vacancy on the thermal conductivity of multi-layer graphene at various temperatures using equilibrium molecular dynamics with the Green-Kubo theory. The Taguchi orthogonal algorithm is used to evaluate the sensitivity of N-doping, the -CH3 group, and single vacancy. Sole factor analysis shows that the effect of single vacancy on thermal conductivity is always the strongest at 300 K, 700 K, and 1500 K. However, for the graphene with three defects, the single vacancy defect only plays a significant role in the thermal conductivity modification at 300 K and 700 K, while the -CH3 group dominates the thermal conductivity reduction at 1500 K. The phonon dispersion is calculated using a spectral energy density approach to explain such a temperature dependence. The combined effect of the three defects further decreases the thermal conductivity compared to any sole defect at both 300 K and 700 K. The weaker single vacancy effect is due to the stronger Umklapp scattering at 1500 K, at which the combined effect seriously covers almost all the energy gaps in the phonon dispersion relation, significantly reducing the phonon lifetimes. Therefore, the temperature dependence only appears on the multi-layer graphene with combined defects.Graphene has received great attention due to its fascinating thermal properties. The inevitable defects in graphene, such as single vacancy, doping, and functional group, greatly affect the thermal conductivity. The sole effect of these defects on the thermal conductivity has been widely studied, while the mechanisms of the coupling effects are still open. We studied the combined effect of defects with N-doping, the -CH3 group, and single vacancy on the thermal conductivity of multi-layer graphene at various temperatures using equilibrium molecular dynamics with the Green-Kubo theory. The Taguchi orthogonal algorithm is used to evaluate the sensitivity of N-doping, the -CH3 group, and single vacancy. Sole factor analysis shows that the effect of single vacancy on thermal conductivity is always the strongest at 300 K, 700 K, and 1500 K. However, for the graphene with three defects, the single vacancy defect only plays a significant role in the thermal conductivity modification at 300 K and 700 K, while the... read less USED (high confidence) J. Lee, X. Hu, A. Voevodin, A. Martini, and D. Berman, “Effect of Substrate Support on Dynamic Graphene/Metal Electrical Contacts,” Micromachines. 2018. link Times cited: 9 Abstract: Recent advances in graphene and other two-dimensional (2D) m… read moreAbstract: Recent advances in graphene and other two-dimensional (2D) material synthesis and characterization have led to their use in emerging technologies, including flexible electronics. However, a major challenge is electrical contact stability, especially under mechanical straining or dynamic loading, which can be important for 2D material use in microelectromechanical systems. In this letter, we investigate the stability of dynamic electrical contacts at a graphene/metal interface using atomic force microscopy (AFM), under static conditions with variable normal loads and under sliding conditions with variable speeds. Our results demonstrate that contact resistance depends on the nature of the graphene support, specifically whether the graphene is free-standing or supported by a substrate, as well as on the contact load and sliding velocity. The results of the dynamic AFM experiments are corroborated by simulations, which show that the presence of a stiff substrate, increased load, and reduced sliding velocity lead to a more stable low-resistance contact. read less USED (high confidence) Q. Zhang, Y. Zhao, X. Ma, and X. Pang, “Adhesion Behavior of Graphene Exfoliated from Silicon Substrate by Atomic Calculation,” 2018 IEEE 13th Annual International Conference on Nano/Micro Engineered and Molecular Systems (NEMS). 2018. link Times cited: 0 Abstract: By applying a constant vertical upward velocity to graphene … read moreAbstract: By applying a constant vertical upward velocity to graphene which was on silicon substrate, the adhesion behavior of graphene was observed. The effects of silicon substrate size, graphene layer number and exfoliation velocity on adhesion properties of graphene were studied. The influence of silicon substrate size on the exfoliation process can be ignored when it was 40 Ålarger than graphene. The minimum velocity to exfoliate monolayer graphene was 4.3 Å/ps, and the maximum adhesive force was 25.04 nN. For two layer graphene, velocity was applied on the top layer, 5.2 Å/ps and 12 Å/ps were the critical velocities. When the velocity was no more than 5.2 Å/ps, the top layer graphene cannot be exfoliated. The top layer graphene was moved upward, meanwhile driving the second layer upward because of interlayer interaction between layers, as the velocity was in the range of 5.2 Å/ps~12 Å/ps. While the velocity increased greater than 12 Å/ps, the top layer was broken through the barrier of substrate and the second layer, then exfoliated alone. The velocity was extremely high to exfoliate graphene, and the adhesion energy was 299.81 mJ/m2, thus the adhesion between graphene and silicon was very strong. read less USED (high confidence) F. Liu, T.-C. Wang, and Q. Tang, “In-Plane Heterostructures Enable Internal Stress Assisted Strain Engineering in 2D Materials.,” Small. 2018. link Times cited: 6 Abstract: Conventional methods to induce strain in 2D materials can ha… read moreAbstract: Conventional methods to induce strain in 2D materials can hardly catch up with the sharp increase in requirements to design specific strain forms, such as the pseudomagnetic field proposed in graphene, funnel effect of excitons in MoS2 , and also the inverse funnel effect reported in black phosphorus. Therefore, a long-standing challenge in 2D materials strain engineering is to find a feasible scheme that can be used to design given strain forms. In this article, combining the ability of experimentally synthetizing in-plane heterostructures and elegant Eshelby inclusion theory, the possibility of designing strain fields in 2D materials to manipulate physical properties, which is called internal stress assisted strain engineering, is theoretically demonstrated. Particularly, through changing the inclusion's size, the stress or strain gradient can be controlled precisely, which is never achieved. By taking advantage of it, the pseudomagnetic field as well as the funnel effect can be accurately designed, which opens an avenue to practical applications for strain engineering in 2D materials. read less USED (high confidence) B. Maerz et al., “Mesoscopic structure features in synthetic graphite,” Materials & Design. 2018. link Times cited: 30 USED (high confidence) R. Kothari, S. I. Kundalwal, and S. Sahu, “Transversely isotropic thermal properties of carbon nanotubes containing vacancies,” Acta Mechanica. 2018. link Times cited: 31 USED (high confidence) R. Kothari, S. I. Kundalwal, and S. Sahu, “Transversely isotropic thermal properties of carbon nanotubes containing vacancies,” Acta Mechanica. 2018. link Times cited: 0 USED (high confidence) Y. Cheng, P. Zhu, and R. Li, “The Influence of Vertical Vibration on Nanoscale Friction: A Molecular Dynamics Simulation Study.” 2018. link Times cited: 16 Abstract: The influence of vibration on friction at the nanoscale was … read moreAbstract: The influence of vibration on friction at the nanoscale was studied via molecular dynamics (MD) simulations. The results show that average friction increases in a high-frequency range. This can be attributed to the vibration of the tip following vibration excitation, which results in peaks of repulsive interaction between tip and substrate and leads to higher friction. However, when the frequency is lower than a certain value, friction decreases. This is because vibration excitation results not in an obvious vibration of the tip but in a slightly larger interface distance, which leads to a decrease in friction. read less USED (high confidence) B. H. S. Mendoncca, D. N. D. Freitas, M. H. Kohler, R. J. Batista, M. Barbosa, and A. B. Oliveira, “Diffusion behaviour of water confined in deformed carbon nanotubes,” Physica A: Statistical Mechanics and its Applications. 2018. link Times cited: 20 USED (high confidence) S. Ebrahimi, “The effect of Stone-Wales defects and roughness degree on the lubricity of graphene on gold surfaces,” Journal of Molecular Modeling. 2018. link Times cited: 3 USED (high confidence) B. Ni, T. Zhang, J. Li, X. Li, and H. Gao, “Topological Design of Graphene,” Handbook of Graphene. 2018. link Times cited: 7 Abstract: Topological defects (e.g. pentagons, heptagons and pentagon-… read moreAbstract: Topological defects (e.g. pentagons, heptagons and pentagon-heptagon pairs) have been widely observed in large scale graphene and have been recognized to play important roles in tailoring the mechanical and physical properties of two-dimensional materials in general. Thanks to intensive studies over the past few years, optimizing properties of graphene through topological design has become a new and promising direction of research. In this chapter, we review some of the recent advances in experimental, computational and theoretical studies on the effects of topological defects on mechanical and physical properties of graphene and applications of topologically designed graphene. The discussions cover out-of-plane effects, inverse problems of designing distributions of topological defects that make a graphene sheet conform to a targeted three-dimensional surface, grain boundary engineering for graphene strength, curved graphene for toughness enhancement and applications in engineering energy materials, multifunctional materials and interactions with biological systems. Despite the rapid developments in experiments and simulations, our understanding on the relations between topological defects and mechanical and physical properties of graphene and other 2D materials is still in its infancy. The intention here is to draw the attention of the research community to some of the open questions in this field. read less USED (high confidence) E. Sandoz-Rosado, T. D. Beaudet, J. Andzelm, and E. Wetzel, “High strength films from oriented, hydrogen-bonded ‘graphamid’ 2D polymer molecular ensembles,” Scientific Reports. 2018. link Times cited: 24 USED (high confidence) K. Cai, J. Shi, Y. Xie, and Q. Qin, “A nano continuous variable transmission system from nanotubes,” Nanotechnology. 2018. link Times cited: 4 Abstract: A nano continuous variable transmission (nano-CVT) system is… read moreAbstract: A nano continuous variable transmission (nano-CVT) system is proposed by means of carbon nanotubes (CNTs). The dynamic behavior of the CNT-based nanosystem is assessed using molecular dynamics simulations. The system contains a rotary CNT-motor and a CNT-bearing. The tube axes of the nanomotor and the rotor in the bearing are laid in parallel, and the distance between them is known as the eccentricity of the rotor with a diameter of d. By changing the eccentricity (e) of the rotor from 0 to d, some interesting rotation transmission phenomena are discovered, whose procedures can be used to design various nanodevices. This might include the failure of rotation transmission—i.e. the rotor has no rotation—when e ≥ d at an extremely low temperature, or when the edges of the two tubes are orthogonal at their intersections in any condition. This hints that the state of the nanosystem can be used as an on/off switch or breaker. For a system with e = d and a high temperature, the rotor rotates in the reverse direction of the motor. This means that the output signal (rotation) is the reverse of the input signal. When changing the eccentricity from 0 to d continuously, the output signal gradually decreases from a positive value to a negative value; as a result a nano-CVT system is obtained. read less USED (high confidence) S. Ebrahimi and M. Azizi, “The effect of high concentrations and orientations of Stone–Wales defects on the thermal conductivity of graphene nanoribbons,” Molecular Simulation. 2018. link Times cited: 8 Abstract: The influence of the orientations and concentrations of the … read moreAbstract: The influence of the orientations and concentrations of the Stone–Wales (SW) defects on the thermal conductivity of zigzag and armchair graphene nanoribbons (GNRs) is explored using the reverse non-equilibrium molecular dynamics method. The results show that the thermal conductivity of GNRs with two different chirality cases reaches the minimum in the range of 0.1–0.7% defect concentration. Beyond a critical value of the SW defect concentration, the thermal conductivity increases with the increase in SW concentration for both zigzag and armchair GNRs. It is shown that at high concentrations of the SW defects, the thermal conductivity of zigzag GNRs with Type II defects is larger than the GNRs with Type I defects. Finally, the dependence of the SW defect concentration and orientation on the power spectra overlaps have also been explored. read less USED (high confidence) D. Damasceno, E. Mesquita, R. Rajapakse, and R. Pavanello, “Atomic-scale finite element modelling of mechanical behaviour of graphene nanoribbons,” International Journal of Mechanics and Materials in Design. 2018. link Times cited: 0 USED (high confidence) H. Cai, Y. Guo, and W. Guo, “Friction induced structural transformations of water monolayers at graphene/Cu interfaces.,” Physical chemistry chemical physics : PCCP. 2018. link Times cited: 6 Abstract: Tribological and structural properties of water monolayers c… read moreAbstract: Tribological and structural properties of water monolayers confined at interfaces between graphene and Cu substrates at cryogenic and room temperatures are extensively studied using molecular dynamics simulations and first-principles calculations. The frictions caused by the sliding of graphene sheets and increasing temperature will reduce the interfacial density of water molecules and lead to structural transformations of water monolayers and direct contacts of graphene with the underlying Cu substrates. Such changes in water structures give rise to higher friction forces and shear strengths at the graphene/Cu interfaces. Depending on the water coverage density and temperature, the motions of graphene on monolayer water covered Cu exhibit stick-slip and continuous slipping behaviors. The strong association of friction characteristics with structural transformations of water molecules could be used to unveil interfacial information of graphene on water adsorbed metal surfaces. read less USED (high confidence) M. Nikfar and M. Asghari, “Analytical and molecular dynamics simulation approaches to study behavior of multilayer graphene-based nanoresonators incorporating interlayer shear effect,” Applied Physics A. 2018. link Times cited: 4 USED (high confidence) I. Evazzade et al., “Graphene nanoribbon as an elastic damper,” Nanotechnology. 2018. link Times cited: 20 Abstract: Heterostructures composed of dissimilar two-dimensional nano… read moreAbstract: Heterostructures composed of dissimilar two-dimensional nanomaterials can have nontrivial physical and mechanical properties which are potentially useful in many applications. Interestingly, in some cases, it is possible to create heterostructures composed of weakly and strongly stretched domains with the same chemical composition, as has been demonstrated for some polymer chains, DNA, and intermetallic nanowires supporting this effect of two-phase stretching. These materials, at relatively strong tension forces, split into domains with smaller and larger tensile strains. Within this region, average strain increases at constant tensile force due to the growth of the domain with the larger strain, at the expense of the domain with smaller strain. Here, the two-phase stretching phenomenon is described for graphene nanoribbons with the help of molecular dynamics simulations. This unprecedented feature of graphene that is revealed in our study is related to the peculiarities of nucleation and the motion of the domain walls separating the domains of different elastic strain. It turns out that the loading–unloading curves exhibit a hysteresis-like behavior due to the energy dissipation during the domain wall nucleation and motion. Here, we put forward the idea of implementing graphene nanoribbons as elastic dampers, efficiently converting mechanical strain energy into heat during cyclic loading–unloading through elastic extension where domains with larger and smaller strains coexist. Furthermore, in the regime of two-phase stretching, graphene nanoribbon is a heterostructure for which the fraction of domains with larger and smaller strain, and consequently its physical and mechanical properties, can be tuned in a controllable manner by applying elastic strain and/or heat. read less USED (high confidence) S. Ajori, S. Haghighi, and R. Ansari, “A molecular dynamics study on the thermal conductivity of endohedrally functionalized single-walled carbon nanotubes with gold nanowires,” The European Physical Journal D. 2018. link Times cited: 23 USED (high confidence) K. Zhou 周, Ning 宁 Xu 徐, and G. Xie 谢, “Thermal conductivity of carbon nanotube superlattices: Comparative study with defective carbon nanotubes,” Chinese Physics B. 2018. link Times cited: 2 Abstract: We use molecular dynamics simulation to calculate the therma… read moreAbstract: We use molecular dynamics simulation to calculate the thermal conductivities of (5, 5) carbon nanotube superlattices (CNTSLs) and defective carbon nanotubes (DCNTs), where CNTSLs and DCNTs have the same size. It is found that the thermal conductivity of DCNT is lower than that of CNTSL at the same concentration of Stone–Wales (SW) defects. We perform the analysis of heat current autocorrelation functions and observe the phonon coherent resonance in CNTSLs, but do not observe the same effect in DCNTs. The phonon vibrational eigen-mode analysis reveals that all modes of phonons are strongly localized by SW defects. The degree of localization of CNTSLs is lower than that of DCNTs, because the phonon coherent resonance results in the phonon tunneling effect in the longitudinal phonon mode. The results are helpful in understanding and tuning the thermal conductivity of carbon nanotubes by defect engineering. read less USED (high confidence) M. Nikfar and M. Asghari, “Analytical and molecular dynamics simulation approaches to study behavior of multilayer graphene-based nanoresonators incorporating interlayer shear effect,” Applied Physics A. 2018. link Times cited: 0 USED (high confidence) H. Chacham, A. P. Barboza, A. B. de Oliveira, C. K. de Oliveira, R. J. Batista, and B. Neves, “Universal deformation pathways and flexural hardening of nanoscale 2D-material standing folds,” Nanotechnology. 2018. link Times cited: 7 Abstract: In the present work, we use atomic force microscopy nanomani… read moreAbstract: In the present work, we use atomic force microscopy nanomanipulation of 2D-material standing folds to investigate their mechanical deformation. Using graphene, h-BN and talc nanoscale wrinkles as testbeds, universal force–strain pathways are clearly uncovered and well-accounted for by an analytical model. Such universality further enables the investigation of each fold bending stiffness κ as a function of its characteristic height h0. We observe a more than tenfold increase of κ as h0 increases in the 10–100 nm range, with power-law behaviors of κ versus h0 with exponents larger than unity for the three materials. This implies anomalous scaling of the mechanical responses of nano-objects made from these materials. read less USED (high confidence) X. Yuan and Y. Wang, “Collapsed adhesion of carbon nanotubes on silicon substrates: continuum mechanics and atomistic simulations,” Nanotechnology. 2018. link Times cited: 14 Abstract: Carbon nanotubes (CNTs) can undergo collapse from the ordina… read moreAbstract: Carbon nanotubes (CNTs) can undergo collapse from the ordinary cylindrical configurations to bilayer ribbons when adhered on substrates. In this study, the collapsed adhesion of CNTs on the silicon substrates is investigated using both classical molecular dynamics (MD) simulations and continuum analysis. The governing equations and transversality conditions are derived based on the minimum potential energy principle and the energy-variational method, considering both the van der Waals interactions between CNTs and substrates and those inside CNTs. Closed-form solutions for the collapsed configuration are obtained which show good agreement with the results of MD simulations. The stability of adhesive configurations is investigated by analyzing the energy states. It is found that the adhesive states of single-walled CNTs (SWCNTs) (n, n) on the silicon substrates can be categorized by two critical radii, 0.716 and 0.892 nm. For SWCNTs with radius larger than 0.892 nm, they would fully collapse on the silicon substrates. For SWCNTs with radius less than 0.716 nm, the initial cylindrical configuration is energetically favorable. For SWCNTs with radius between two critical radii, the radially deformed state is metastable. The non-contact ends of all collapsed SWCNTs are identical with the same arc length of 2.38 nm. Finally, the role of number of walls on the adhesive configuration is investigated quantitatively. For multi-walled CNTs with the number of walls exceeding a certain value, the cylindrical configuration is stable due to the increasing bending stiffness. The present study can be useful for the design of CNT-based nanodevices. read less USED (high confidence) A. Pedrielli, S. Taioli, G. Garberoglio, and N. Pugno, “Mechanical and thermal properties of graphene random nanofoams via Molecular Dynamics simulations,” Carbon. 2018. link Times cited: 21 USED (high confidence) A. Pedrielli, S. Taioli, G. Garberoglio, and N. Pugno, “Mechanical and thermal properties of Graphene Random Foams.” 2018. link Times cited: 19 USED (high confidence) J. Wan, J.-W. Jiang, and H. S. Park, “Irreversible crumpling of graphene from hydrostatic and biaxial compression,” Journal of Physics D: Applied Physics. 2018. link Times cited: 2 Abstract: We perform molecular dynamics simulations to investigate the… read moreAbstract: We perform molecular dynamics simulations to investigate the irreversibility of crumpled graphene obtained by hydrostatic or biaxial compression. Our results show that there is a critical degree of crumpling, above which the crumpling is irreversible after the external force is removed. The critical degree of irreversible crumpling is closely related to the self-adhesion phenomenon of graphene, which leads to a step-like jump or decrease in the adhesion energy. We find the critical degree of crumpling is about 0.5 or 0.55 for hydrostatic or biaxial compression, which matches analytic predictions based on a competition between adhesive and bending energies in folded graphene. read less USED (high confidence) L. Cui, S. Shi, G. Wei, and X. Du, “Shear deformation-induced anisotropic thermal conductivity of graphene.,” Physical chemistry chemical physics : PCCP. 2018. link Times cited: 6 Abstract: Graphene-based materials exhibit intriguing phononic and the… read moreAbstract: Graphene-based materials exhibit intriguing phononic and thermal properties. In this paper, we have investigated the heat conductance in graphene sheets under shear-strain-induced wrinkling deformation, using equilibrium molecular dynamics simulations. A significant orientation dependence of the thermal conductivity of graphene wrinkles (GWs) is observed. The directional dependence of the thermal conductivity of GWs stems from the anisotropy of phonon group velocities as revealed by the G-band broadening of the phonon density of states (DOS), the anisotropy of thermal resistance as evidenced by the G-band peak mismatch of the phonon DOS, and the anisotropy of phonon relaxation times as a direct result of the double-exponential-fitting of the heat current autocorrelation function. By analyzing the relative contributions of different lattice vibrations to the heat flux, we have shown that the contributions of different lattice vibrations to the heat flux of GWs are sensitive to the heat flux direction, which further indicates the orientation-dependent thermal conductivity of GWs. Moreover, we have found that, in the strain range of 0-0.1, the anisotropy ratio of GWs increases monotonously with increasing shear strain. This is induced by the change in the number of wrinkles, which is more influential in the direction perpendicular to the wrinkle texture. The findings elucidated here emphasize the utility of wrinkle engineering for manipulation of nanoscale heat transport, which offers opportunities for the development of thermal channeling devices. read less USED (high confidence) M. Maździarz, A. Mrózek, W. Kuś, and T. Burczynski, “Anisotropic-Cyclicgraphene: A New Two-Dimensional Semiconducting Carbon Allotrope,” Materials. 2017. link Times cited: 14 Abstract: A potentially new, single-atom thick semiconducting 2D-graph… read moreAbstract: A potentially new, single-atom thick semiconducting 2D-graphene-like material, called Anisotropic-cyclicgraphene , has been generated by the two stage searching strategy linking molecular and ab initio approach. The candidate was derived from the evolutionary-based algorithm and molecular simulations was then profoundly analysed using first-principles density functional theory from the structural, mechanical, phonon, and electronic properties point of view. The proposed polymorph of graphene (rP16-P1m1) is mechanically, dynamically, and thermally stable and can achieve semiconducting with a direct band gap of 0.829 eV. read less USED (high confidence) J. H. Park, R. Murugesan, J. Lee, and N. Aluru, “Anomalous characteristics of pore formation in Graphene induced by Si-nanoparticle bombardment,” MRS Communications. 2017. link Times cited: 1 Abstract: Graphene nanopores are utilized in various notable applicati… read moreAbstract: Graphene nanopores are utilized in various notable applications such as water desalination, molecular separation, and DNA sequencing. However, the creation of stable nanopores is still challenging due to the self-healing nature of graphene. In this study, using molecular dynamics simulations we explore the drilling of nanopores through graphene by bombardment with Si-nanoparticles. This enables the Si-passivation along the nanopore rim, which is known as an efficient way to stabilize graphene nanopores. The interplay between graphene and projectile causes the anomalous behaviors such as local maxima depending on particle size. The observations are thoroughly analyzed with interaction energy and shape changes. read less USED (high confidence) Y. Li, Q. Lin, Y. Li, and D. Cui, “Tunable thermal conductivities of graphene and graphyne under in-plane torsion,” RSC Advances. 2017. link Times cited: 3 Abstract: Using the non-equilibrium molecular dynamics method, the the… read moreAbstract: Using the non-equilibrium molecular dynamics method, the thermal properties of two dimensional nanomaterials are investigated by considering graphene and graphyne nanosheets with circular boundaries. The thermal transport efficiency of graphene and graphyne under heat flux from the inner boundary to outer boundary is revealed to be tunable by applying in-plane torsion at the inner boundary, and the tunable range of thermal conductivity for graphyne could be up to 37% (15% for graphene). With the increase of rotation angle, the thermal conductivities of both graphene and graphyne are found to increase at small rotation angles and then decrease after the occurrence of wrinkle deformation. The maximum thermal conductivity appears at the onset of wrinkling which depends on the lattice structure and stiffness of the nanosheets. By systematically investigating the morphological characteristics and the phonon spectra under different torsion angles, the tunable thermal conductivities of both graphene and graphyne are found to be controlled by three factors including surface smoothness, stress concentration and lattice instability. The increase of thermal conductivity with small torsion angles is caused by the suppressed surface fluctuation which decreases the phonon scattering, while the wrinkling and lattice instability occurring under large torsion angles accounts for the deterioration of thermal conductivity. Since the fluctuation of graphyne is efficiently compressed at smaller torsion angles compared to graphene, the maximum thermal conductivity of graphyne appears earlier than graphene. Such correlation between out-of-plane deformation and in-plane thermal conductivity provides new insights into the thermal management of two dimensional nanomaterials. read less USED (high confidence) T. Li, Z. Wang, Y. Duan, J. Li, and H. Li, “Molecular dynamics study on the formation of self-organized core/shell structures in the Pb alloy at the nanoscale,” RSC Advances. 2017. link Times cited: 10 Abstract: Herein, we report a self-organized core/shell (CS) structure… read moreAbstract: Herein, we report a self-organized core/shell (CS) structure consisting of an Al core and a Pb shell in the liquid Pb alloys at a constant temperature. This is contrary to a believed opinion that the thermal gradient acts as the only driving force for the formation of this kind of structure. The results show that its forming ability greatly depends on the composition and temperature. Importantly, when the alloys are placed in the confined space, a structure of Al–Pb–Al sandwich construction and a completely different CS structure composed of a Pb core and an Al shell are obtained; this suggests a new strategy for controlling the phase-separated structures at the nanoscale. More interestingly, an abnormal phenomenon in the low Pb alloys with the amorphous thin Pb shell and the crystal Al core is observed after solidification, which does not occur in the high Pb alloys that just possess a secondary wrapped structure that never appears in the liquid state. The result of this study may help to shed light on understanding the formation of this core/shell structure and controlling it at an atomic view that have a potential application in the fabrication of these structural materials through nanotechnology. read less USED (high confidence) X. Hu and A. Martini, “Atomistic simulations of contact area and conductance at nanoscale interfaces.,” Nanoscale. 2017. link Times cited: 7 Abstract: Atomistic simulations were used to study conductance across … read moreAbstract: Atomistic simulations were used to study conductance across the interface between a nanoscale gold probe and a graphite surface with a step edge. Conductance on the graphite terrace was observed to increase with load and be approximately proportional to contact area calculated from the positions of atoms in the interface. The relationship between area and conductance was further explored by varying the position of the contact relative to the location of the graphite step edge. These simulations reproduced a previously-reported current dip at step edges measured experimentally and the trend was explained by changes in both contact area and the distribution of distances between atoms in the interface. The novel approach reported here provides a foundation for future studies of the fundamental relationships between conductance, load and surface topography at the atomic scale. read less USED (high confidence) S. Dabaghmanesh, M. Neek‐Amal, B. Partoens, and E. Neyts, “The formation of Cr 2 O 3 nanoclusters over graphene sheet and carbon nanotubes,” Chemical Physics Letters. 2017. link Times cited: 4 USED (high confidence) M. A. Doronin, K. Larionov, S. Troschiev, and S. Terentiev, “Dependence of Synthetic Diamond Wear Rate on Lattice Orientation at Traditional Mechanical Treatment,” Journal of Surface Investigation: X-ray, Synchrotron and Neutron Techniques. 2017. link Times cited: 1 USED (high confidence) A. Alian and S. Meguid, “Hybrid molecular dynamics–finite element simulations of the elastic behavior of polycrystalline graphene,” International Journal of Mechanics and Materials in Design. 2017. link Times cited: 1 USED (high confidence) M. Kargar and A. Lohrasebi, “Deformation of water nano-droplets on graphene under the influence of constant and alternative electric fields.,” Physical chemistry chemical physics : PCCP. 2017. link Times cited: 17 Abstract: The dynamics of a water nano-droplet on a flexible graphene … read moreAbstract: The dynamics of a water nano-droplet on a flexible graphene sheet, in the presence of constant and alternative electric fields with various amplitudes and frequencies, was considered using a molecular dynamics method. It was found that because the water molecules respond to electric field, the nano-droplet elongates in the field direction for a field amplitude larger than 0.08 V Å-1, which is stronger than the predicted value from the Young-Laplace equation. This difference can be described by considering the van der Waals attractions between the droplet molecules and the substrate, which can be calculated by modifying the Young-Laplace equation. Furthermore, under the influence of an alternating field over the GHz frequency range, it was shown that the droplet shape will not change above a threshold frequency, which depends on the relaxation time of the water dipole. read less USED (high confidence) M. S. Beni, D. Krstić, D. Nikezic, and K. N. Yu, “Modeling Coloration of a Radiochromic Film with Molecular Dynamics-Coupled Finite Element Method,” Applied Sciences. 2017. link Times cited: 2 Abstract: Radiochromic films change color upon exposures to radiation … read moreAbstract: Radiochromic films change color upon exposures to radiation doses as a result of solid-state polymerization (SSP). Commercially available radiochromic films are primarily designed for, and have become widely used in, clinical X-ray dosimetry. However, many intriguing properties of radiochromic films are not yet fully understood. The present work aimed at developing a theoretical model at both atomic and macroscopic scales to provide a platform for future works to understand these intriguing properties. Despite the fact that radiochromic films were primarily designed for clinical X-ray dosimetry, dose-response curves for the Gafchromic EBT3 film obtained for ultraviolet (UV) radiation were employed to develop our model in order to avoid complications of ionization, non-uniform energy deposition, as well as dispersed doses caused by secondary electrons set in motion by the indirectly ionizing X-ray photons, which might introduce added uncertainties to the model and overshadow the basic SSP processes. The active layer in the EBT3 film consisted of diacetylene (DA) pentacosa-10,12-diynoate monomers, which were modelled using molecular dynamics (MD). The degrees of SSP in the atomic scale upon different UV exposures were obtained to determine the absorption coefficients of the active layer, which were then input into the finite element method (FEM). The classical steady-state Helmholtz equation was engaged to model the reflection from the active layer using the FEM technique. The multifrontal massively parallel sparse direct solver (MUMPS) was employed to solve the present numerical problem. Very good agreement between experimentally and theoretically obtained coloration in terms of net reflective optical density was achieved for different UV exposures. In particular, for UV exposures larger than ~40 J/cm2, the reflected light intensity decreased at a lower rate when compared to other UV exposure values, which was explained by the densely cross-linked structure under near-complete polymerization, and thus the lower efficiency for further bond formation between DA monomer strands. read less USED (high confidence) T. Ma, H. Tan, and J. Wei, “Pullout behavior of large-diameter collapsed double-walled carbon nanotubes,” Journal of Wuhan University of Technology-Mater. Sci. Ed. 2017. link Times cited: 1 USED (high confidence) H. Qin and Y. Liu, “Interlayer shear behaviors of graphene-carbon nanotube network,” Journal of Applied Physics. 2017. link Times cited: 3 Abstract: The interlayer shear resistance plays an important role in g… read moreAbstract: The interlayer shear resistance plays an important role in graphene related applications, and different mechanisms have been proposed to enhance its interlayer load capacity. In this work, we performed molecular dynamics (MD) simulations and theoretical analysis to study interlayer shear behaviors of three dimensional graphene-carbon (3D-GC) nanotube networks. The shear mechanical properties of carbon nanotubes (CNTs) crosslink with different diameters are obtained which is one order of magnitude larger than that of other types of crosslinks. Under shear loading, 3D-GC exhibits two failure modes, i.e., fracture of graphene sheet and failure of CNT crosslink, determined by the diameter of CNT crosslink, crosslink density, and length of 3D-GC. A modified tension-shear chain model is proposed to predict the shear mechanical properties and failure mode of 3D-GC, which agrees well with MD simulation results. The results presented in this work may provide useful insights for future development of high-performan... read less USED (high confidence) K. Cai, J. Shi, L. Liu, and Q. Qin, “Self-assembly of a nanotube from a black phosphorus nanoribbon on a string of fullerenes at low temperature.,” Physical chemistry chemical physics : PCCP. 2017. link Times cited: 8 Abstract: A string of fullerenes is used for generating a nanotube by … read moreAbstract: A string of fullerenes is used for generating a nanotube by self-assembly of a black phosphorus (BP) nanoribbon at a temperature of 8 K. Among the fullerenes in the string, there are at least two fixed fullerenes placed along the edge of the BP ribbon for keeping its configuration stability during winding. By way of molecular dynamics simulations, it is found that successful generation of a BP nanotube depends on the bending stiffness of the ribbon and the attraction between the fullerenes and the ribbon. When the attraction is strong enough, the two edges (along the zigzag direction) of the BP ribbon will be able to bond covalently to form a nanotube. By the molecular dynamics approach, the maximum width of the BP ribbon capable of forming a nanotube with a perfect length is investigated in three typical models. The maximum width of the BP ribbon becomes larger with the string containing more fullerenes. This finding reveals a way to control the width of the BP ribbon which forms a nanotube. It provides guidance for fabricating a BP nanotube with a specified length, the same as to the width of the ribbon. read less USED (high confidence) S. K. Jalali, M. J. Beigrezaee, and N. Pugno, “Atomistic evaluation of the stress concentration factor of graphene sheets having circular holes,” Physica E-low-dimensional Systems & Nanostructures. 2017. link Times cited: 9 USED (high confidence) X. Yang, Y. Huang, B. Cao, and A. To, “Length and temperature dependence of the mechanical properties of finite-size carbyne,” Physica E-low-dimensional Systems & Nanostructures. 2017. link Times cited: 13 USED (high confidence) X. Zhou et al., “Layering of confined water between two graphene sheets and its liquid–liquid transition*,” Chinese Physics B. 2017. link Times cited: 3 Abstract: Molecular dynamics (MD) simulations are performed to explore… read moreAbstract: Molecular dynamics (MD) simulations are performed to explore the layering structure and liquid–liquid transition of liquid water confined between two graphene sheets with a varied distance at different pressures. Both the size of nanoslit and pressure could cause the layering and liquid–liquid transition of the confined water. With increase of pressure and the nanoslit's size, the confined water could have a more obvious layering. In addition, the neighboring water molecules firstly form chain structure, then will transform into square structure, and finally become triangle with increase of pressure. These results throw light on layering and liquid–liquid transition of water confined between two graphene sheets. read less USED (high confidence) X.-K. Chen, C. Chen, J. Liu, and K. Chen, “Remarkable reduction of thermal conductivity in graphyne nanotubes by local resonance,” Journal of Physics D: Applied Physics. 2017. link Times cited: 9 Abstract: By using equilibrium molecular dynamics simulations and latt… read moreAbstract: By using equilibrium molecular dynamics simulations and lattice dynamic calculations, we investigate the thermal transport properties of graphyne nanotubes (GNTs). The results demonstrate that the GNTs exhibit relatively low thermal conductivity, which is approximately 10–25% of that in a carbon nanotube. Detailed lattice dynamic analyses indicate that the presence of sp carbon atoms can induce local resonance modes in the low frequency region, which results in the remarkable decrease of thermal conductivity. Meanwhile, the high-frequency phonon lifetimes also drop because of the vibrational mismatch between sp and sp2 carbon atoms (enhanced phonon scattering). Our results show the local resonance of phonons is an important mechanism for the reduction of thermal conductivity in low-dimensional nanostructures. read less USED (high confidence) J. Zhang and Q. Xiong, “The negative Poisson’s ratio in graphene-based carbon foams.,” Physical chemistry chemical physics : PCCP. 2017. link Times cited: 16 Abstract: Using molecular dynamics simulations, we find an in-plane ne… read moreAbstract: Using molecular dynamics simulations, we find an in-plane negative Poisson's ratio intrinsically existing in the graphene-based three-dimensional (3D) carbon foams (CFs) when they are compressed uniaxially. Our study shows that the negative Poisson's ratio in the present CFs is attributed to their unique molecular structures and triggered by the buckling of the CF structures. This mechanism makes the negative Poisson's ratio of CFs strongly depend on their cell length, which offers us an efficient means to tune the negative Poisson's ratio in nanomaterials. Moreover, as the buckling modes of CFs are topographically different when they are compressed in different directions, their negative Poisson's ratio is found to be strongly anisotropic, which is in contrast to the isotropic positive Poisson's ratio observed in CFs prior to buckling. The discovery of the intrinsic negative Poisson's ratio in 3D CFs will significantly expand the family of auxetic nanomaterials. Meanwhile, the mechanism of nano-auxetics proposed here may open up a door to manufacture new auxetic materials on the nanoscale. read less USED (high confidence) F. Valencia, R. González, E. Bringa, and M. Kiwi, “Hillock formation on nanocrystalline diamond,” Carbon. 2017. link Times cited: 9 USED (high confidence) H. Zhan, Y. Zhang, C. Yang, G. Zhang, and Y. T. Gu, “Graphene helicoid as novel nanospring,” Carbon. 2017. link Times cited: 38 USED (high confidence) S. Sahmani and A. Fattahi, “Development of efficient size-dependent plate models for axial buckling of single-layered graphene nanosheets using molecular dynamics simulation,” Microsystem Technologies. 2017. link Times cited: 31 USED (high confidence) K.-hyun Park and U. Ravaioli, “Limited thermal transport in rippled graphene induced by bi-axial strain for thermoelectric applications,” Journal of Applied Physics. 2017. link Times cited: 8 Abstract: Among efforts made to improve thermoelectric efficiency, the… read moreAbstract: Among efforts made to improve thermoelectric efficiency, the use of structurally modified graphene nanomaterials as thermoelectric matter are one of the promising strategies owing to their fascinating physical and electrical properties, and these materials are anticipated to be less thermally conductive than regular graphene structures, as a result of an additional phonon scattering introduced at the modified surfaces. In this study, we explore the thermal conductivity behaviors of strain-induced rippled graphene sheets by varying the ripple amplitude, periodicity, and dimensions of the structure. We introduce a technique which enables creation of a graphene sheet with evenly distributed ripples in molecular dynamics simulation, and the Green-Kubo linear response theory is used to calculate the thermal conductivity of the structures of interest. The results reveal the reduction of thermal conductivity with the greater degree of strain, the smaller system dimension, and the shorter ripple wavelength, which, in turn, could lead to the thermoelectric efficiency enhancement. This work has significance in that it presents the capability of generating repeated and controllable patterns in molecular dynamics, and so, it enables the atomic-level transport study in the regularly patterned two-dimensional surface or in any structures with a specified degree of strain.Among efforts made to improve thermoelectric efficiency, the use of structurally modified graphene nanomaterials as thermoelectric matter are one of the promising strategies owing to their fascinating physical and electrical properties, and these materials are anticipated to be less thermally conductive than regular graphene structures, as a result of an additional phonon scattering introduced at the modified surfaces. In this study, we explore the thermal conductivity behaviors of strain-induced rippled graphene sheets by varying the ripple amplitude, periodicity, and dimensions of the structure. We introduce a technique which enables creation of a graphene sheet with evenly distributed ripples in molecular dynamics simulation, and the Green-Kubo linear response theory is used to calculate the thermal conductivity of the structures of interest. The results reveal the reduction of thermal conductivity with the greater degree of strain, the smaller system dimension, and the shorter ripple wavelength, which... read less USED (high confidence) F. Gayk, J. Ehrens, T. Heitmann, P. Vorndamme, A. Mrugalla, and J. Schnack, “Young’s moduli of carbon materials investigated by various classical molecular dynamics schemes,” Physica E-low-dimensional Systems & Nanostructures. 2017. link Times cited: 16 USED (high confidence) A. Verma and A. Parashar, “The effect of STW defects on the mechanical properties and fracture toughness of pristine and hydrogenated graphene.,” Physical chemistry chemical physics : PCCP. 2017. link Times cited: 37 Abstract: Graphene is emerging as a versatile material with a diverse … read moreAbstract: Graphene is emerging as a versatile material with a diverse field of applications. Synthesis techniques for graphene introduce several topological defects such as vacancies, dislocations and Stone-Thrower-Wales (STW) defects. Among them STW defects are generated without deleting any atom from the lattice position, but are introduced by rotating single C-C bonds. In this article, molecular dynamics based simulations have been performed to study the effect of STW defects on the fracture toughness of pristine graphene as well as graphene with crack edges passivated with hydrogen atoms. STW defects help in generating out of plane displacement in conjunction with redistribution of stress around the crack edges that can be used to improve the fracture toughness of brittle graphene. An overall improvement in the fracture toughness of pristine graphene as well as graphene containing hydrogen at the crack edges was predicted in this work. read less USED (high confidence) H. Qin, Y. Sun, J. Z. Liu, and Y. Liu, “Enhanced in-plane mechanical properties of nanoporous graphene-carbon nanotube network,” Journal of Applied Physics. 2017. link Times cited: 5 Abstract: Three dimensional graphene-carbon nanotube networks (3D-GC) … read moreAbstract: Three dimensional graphene-carbon nanotube networks (3D-GC) have attracted great interests due to their superior thermal, optical, and hydrogen storage properties. In our work, the in-plane mechanical properties of nanoporous 3D-GC with different diameters of the joint carbon nanotube (CNT) and porosity have been studied. During in-plane tension, the fracture of 3D-GC first initiates at the heptagonal defects of the junctions between graphene sheets and CNTs where large tensile residual stress is observed. The in-plane tensile strength of 3D-GC decreases with the increasing of CNT parameter and porosity, and the tensile modulus is mainly determined by the porosity. Although the fracture strain decreases with the CNT diameter, it increases with the porosity. Compared to the nanoporous graphene, 3D-GC has larger in-plane tensile strength and fracture strain due to the additional support of CNTs. However, the in-plane tensile modulus of 3D-GC is usually smaller than that of the nanoporous graphene due to the... read less USED (high confidence) J. Griggs, A. Lang, J. Gruber, G. Tucker, M. Taheri, and M. Barsoum, “Spherical nanoindentation, modeling and transmission electron microscopy evidence for ripplocations in Ti3SiC2,” Acta Materialia. 2017. link Times cited: 49 USED (high confidence) H. Ghasemi and A. Rajabpour, “A novel approach to calculate thermal expansion of graphene: Molecular dynamics study,” The European Physical Journal Plus. 2017. link Times cited: 14 USED (high confidence) F. Liu, Q. Tang, and T.-C. Wang, “Intrinsic Notch Effect Leads to Breakdown of Griffith Criterion in Graphene.,” Small. 2017. link Times cited: 9 Abstract: Due to lack of the third dimension in 3D bulk materials, the… read moreAbstract: Due to lack of the third dimension in 3D bulk materials, the crack tip in graphene locates on several atoms implying that its fracture behavior can be closely associated with its lattice structure, i.e., the bond length and angle. As the bond length reflects the discrete nature of the atomic structure, theoretical discussion is focused on the concomitant size effect at the nanoscale with few or no reports about the influence of the bond angle. Through the comparisons between theoretical calculations and experimental data, here it is first demonstrated that the bond angle is essential for understanding the fracture behavior in graphene, serving as an intrinsic notch reducing the stress singularity near the crack tip (the intrinsic notch effect), leading to the breakdown of the Griffith criterion in graphene. The work provides a framework for the studying of the brittle fracture in 2D materials, which gives rise to the more reliable device design based on 2D materials. More importantly, the significance of the intrinsic notch effect is profound and far-reaching, paving the way to a more comprehensive and deep understanding of the mechanical properties in nano as well as nanostructured materials. read less USED (high confidence) Y. Gao, W. Yang, and B. Xu, “Tailoring Auxetic and Contractile Graphene to Achieve Interface Structures with Fully Mechanically Controllable Thermal Transports,” Advanced Materials Interfaces. 2017. link Times cited: 12 Abstract: Graphene is considered as an ideal material candidate for ne… read moreAbstract: Graphene is considered as an ideal material candidate for next‐generation electronic devices due to its high carrier mobility while the associated thermal management has become a critical barrier. Designing graphene whose thermal transport properties can be tuned through external fields is highly desired. Here, an auxetic graphene (AG) and a contractile graphene (CG) are created and a conceptual design of thermal controllable graphene heterostructures is demonstrated by tailoring them together. Using computational simulations, it is shown that the thermal conductivity of graphene heterostructures can be regulated by patterning AG and CG unit cells with different interface properties under a uniaxial tensile strain. Analyses of both mechanical deformation and vibrational spectra indicate that the thermal transport properties of graphene heterostructures are highly dependent on their mechanical stress distribution, and also rely on the interfaces that are parallel with the directions of mechanical loadings. Theoretical models that integrate the contributions of mechanical loading and patterned‐interfaces are developed to quantitatively describe the thermal conductivity of graphene heterostructures. Good agreement of thermal conductivity between theoretical predictions and extensive simulations is obtained. These designs and findings are expected to pave a new route to seek interface‐mediated stretchable thermal electronics with mechanically controllable performance. read less USED (high confidence) L. Yang, K. Cai, J. Shi, and Q. Qin, “Significance tests on the output power of a thermally driven rotary nanomotor,” Nanotechnology. 2017. link Times cited: 16 Abstract: Many factors can have a significant influence on the output … read moreAbstract: Many factors can have a significant influence on the output power of a thermally driven rotary nanomotor made of carbon nanotubes (CNTs). Making use of a computational molecular dynamics approach, we evaluate for the first time the output power of a nanomotor, considering some of the main factors including temperature, the diameter of the rotor and the number of IRD atoms (N) on the stator. When applying extra-resistant torque to the rotor to let the stable value of the rotational frequency of the rotor fluctuate near zero, the value of the resistant torque can be considered as the output power of the rotor. The effects of these factors on the output power of a motor are roughly predicted via a fitting approach. Using stepwise regression analysis, we discover that N has the greatest influence on the output power. The second and the third main factors that affect the output power of a nanomotor are the diameter of the rotor, and the interaction between N and the diameter, respectively. To improve the output power of a nanomotor, one can place more IRD atoms in the system and/or employ CNTs with larger diameters. read less USED (high confidence) S. Zhao, Y. Hu, X. Yu, Y. Liu, Z.-shan Bai, and H. Liu, “Surface wettability effect on fluid transport in nanoscale slit pores,” Aiche Journal. 2017. link Times cited: 46 Abstract: The surface wettability effect on fluid transport in nanosca… read moreAbstract: The surface wettability effect on fluid transport in nanoscale slit pores is quantitatively accessed by using non-equilibrium molecular dynamics (NEMD) simulation incorporating with density functional theory (DFT). In particular, the slip lengths of benzene steady flows under various wetting conditions are computed with NEMD simulations and a quasi-general expression is given, while the structural properties are investigated with DFT. By taking into account the inhomogeneity of fluid density inside pore, we find that the conventional flux enhancement rate is associated with both the molecule slipping and geometrical confinement, and it becomes drastically high in solvophobic pores especially when the pore size is of several fluid diameters. In good agreement with experimental results, we further show that the wettability effect competes with pore size effect in determining the flux after pore inner surface modification, and a high flux can be achieved when the deposited layer is solvophobic yet thin. © 2016 American Institute of Chemical Engineers AIChE J, 63: 1704–1714, 2017 read less USED (high confidence) K. Cai, L. Liu, J. Shi, and Q. Qin, “Self-Assembly of a Jammed Black Phosphorus Nanoribbon on a Fixed Carbon Nanotube,” Journal of Physical Chemistry C. 2017. link Times cited: 17 Abstract: Nanotube synthesizing from black phosphorus (BP) is still ch… read moreAbstract: Nanotube synthesizing from black phosphorus (BP) is still challenging in laboratory. Fabricating a BP nanotube by self-assembling of a BP nanoribbon seems promising. To estimate the feasibility of such fabrication method, this study performs numerical experiments of self-assembling a jammed BP ribbon on a fixed carbon nanotube using molecular dynamics simulation. The study is based on the following two facts: The phosphorus–phosphorus (P–P) bond is weaker than the bond of carbon–carbon (C–C) and the van der Waals interaction among nonbonding phosphorus atoms is stronger than that between phosphorus atoms and carbon atoms. The results show that when a longer BP ribbon is jammed by a shorter BP ribbon the self-assembling result depends on the relative positions of carbon nanotube (CNT) and the two BP ribbons. Only when the shorter BP ribbon is on the outside of the longer ribbon can the longer BP ribbon be wound on the CNT to form an ideal BP nanotube. The finding is helpful for practical applications of BP... read less USED (high confidence) D. Lisovenko, Y. A. Baimova, L. Rysaeva, V. Gorodtsov, and S. Dmitriev, “Equilibrium structures of carbon diamond-like clusters and their elastic properties,” Physics of the Solid State. 2017. link Times cited: 20 USED (high confidence) X. Yuan and Y. Wang, “Atomistic simulations on interwall sliding behaviour of double-walled carbon nanotube: effects of structural defects,” Molecular Simulation. 2017. link Times cited: 7 Abstract: In this study, we investigated the interwall sliding behavio… read moreAbstract: In this study, we investigated the interwall sliding behaviours of double-wall carbon nanotubes (DWCNTs) using molecular dynamics (MD) simulations, focusing on the effects of different structural defects including the vacancy, adsorbed atom (Adatom) and Stone-Wales (SW) defects. The simulation results showed that structural defects, especially the Adatom ones, caused large fluctuations and decreased the overall pull-out force. Stick-slip motions were observed in the interwall sliding processes of DWCNTs containing multiple structural defects. Among three types of structural defects, the Adatom defects most significantly weaken the interwall load transferring capability and degrade the interface shear strength (IFSS). This work provides useful information for promoting DWCNTs’ applications in Micro/Nano Electro-Mechanical Systems (M/NEMS). read less USED (high confidence) J. Zhang, Y. Yan, W. Zong, A. Li, Z. Qiao, and T. Sun, “Chemisorption of hydrogen on graphene: insights from atomistic simulations,” Journal of Physics: Condensed Matter. 2017. link Times cited: 5 Abstract: The properties of graphene can be chemically altered by chan… read moreAbstract: The properties of graphene can be chemically altered by changing its local binding configurations. In the present work, we investigate fundamentals of chemisorption of atomic hydrogen on graphene and its influence on mechanical properties of as-hydrogenated graphene by means of molecular dynamics simulations. Our simulation results indicate that there are diversiform hydrogen-graphene configurations formed in the chemisorption process. Especially, energetically favorable hydrogen pairs result in less even no atomic distortion of graphene than sp3 hybridization. The hydrogenation-induced deterioration of mechanical properties of graphene shows a strong dependence on its chirality. The evolution of bond structures in uniaxial tension along armchair direction is more sensitive to local failure of graphene than zigzag direction, leading to a more pronounced decrease in both fracture stress and fracture strain. It is indicated that the chemisorption of hydrogen on graphene can be strongly affected by operating temperature primarily due to the temperature dependent graphene morphology. These findings advance our understanding of chemical vapor deposition of graphene synthesis and hydrogenation of graphene. read less USED (high confidence) P. Gong, Q. Li, X.-Z. Liu, R. Carpick, and P. Egberts, “Adhesion Mechanics between Nanoscale Silicon Oxide Tips and Few-Layer Graphene,” Tribology Letters. 2017. link Times cited: 16 USED (high confidence) H. Tang, H. Ye, X. Chen, X. Fan, and G. Zhang, “Thermal conductivity of functionalized graphene-polymer nanocomposite: A non-equilibrium molecular dynamics study,” 2017 18th International Conference on Thermal, Mechanical and Multi-Physics Simulation and Experiments in Microelectronics and Microsystems (EuroSimE). 2017. link Times cited: 5 Abstract: Heat transfer across thermal interface material, such as gra… read moreAbstract: Heat transfer across thermal interface material, such as graphene-polymer composite, is a critical issue for microelectronics thermal management. To improve its thermal performance, we use chemical functionalization on the graphene with hydrocarbon chains in this work. Molecular dynamics simulations are used to identify the thermal conductivity of monolayer graphene and graphene-polymer nanocomposites with and without grafted hydrocarbon chain. The influence of functionalization with hydrocarbon chains on the interfacial thermal conductance of graphene-polyethylene nanocomposites was investigated using a non-equilibrium molecular dynamics (NEMD) simulation. We also study the effects of the graft density (number of hydrocarbon chain) on the thermal conductivity of graphene and the nanocomposite. read less USED (high confidence) X. Wu, H. Zhao, J. Pei, and D. Yan, “Joining of graphene flakes by low energy N ion beam irradiation,” Applied Physics Letters. 2017. link Times cited: 14 Abstract: An approach utilizing low energy N ion beam irradiation is a… read moreAbstract: An approach utilizing low energy N ion beam irradiation is applied in joining two monolayer graphene flakes. Raman spectrometry and atomic force microscopy show the joining signal under 40 eV and 1 × 1014 cm−2 N ion irradiation. Molecular dynamics simulations demonstrate that the joining phenomenon is attributed to the punch-down effect and the subsequent chemical bond generation between the two sheets. The generated chemical bonds are made up of inserted ions (embedded joining) and knocked-out carbon atoms (saturation joining). The electronic transport properties of the joint are also calculated for its applications. read less USED (high confidence) X. Liu, J. Gao, G. Zhang, and Y.-W. Zhang, “MoS2-graphene in-plane contact for high interfacial thermal conduction,” Nano Research. 2017. link Times cited: 51 USED (high confidence) H. Qin, Y. Sun, J. Z. Liu, M. Li, and Y. Liu, “Negative Poisson’s ratio in rippled graphene.,” Nanoscale. 2017. link Times cited: 61 Abstract: In this work, we perform molecular dynamics (MD) simulations… read moreAbstract: In this work, we perform molecular dynamics (MD) simulations to study the effect of rippling on the Poisson's ratio of graphene. Due to the atomic scale thickness of graphene, out-of-plane ripples are generated in free standing graphene with topological defects (e.g. heptagons and pentagons) to release the in-plane deformation energy. Through MD simulations, we have found that the Poisson's ratio of rippled graphene decreases upon increasing its aspect ratio η (amplitude over wavelength). For the rippled graphene sheet η = 0.188, a negative Poisson's ratio of -0.38 is observed for a tensile strain up to 8%, while the Poisson's ratio for η = 0.066 is almost zero. During uniaxial tension, the ripples gradually become flat, thus the Poisson's ratio of rippled graphene is determined by the competing factors of the intrinsic positive Poisson's ratio of graphene and the negative Poisson's ratio due to the de-wrinkling effect. Besides, the rippled graphene exhibits excellent fracture strength and toughness. With the combination of its auxetic and excellent mechanical properties, rippled graphene may possess potential for application in nano-devices and nanomaterials. read less USED (high confidence) K. Cai, X. Zhang, J. Shi, and Q. Qin, “Rotation-excited perfect oscillation of a tri-walled nanotube-based oscillator at ultralow temperature,” Nanotechnology. 2017. link Times cited: 5 Abstract: In recent years, carbon-nanotube (CNT)-based gigahertz oscil… read moreAbstract: In recent years, carbon-nanotube (CNT)-based gigahertz oscillators have been widely used in numerous areas of practical engineering such as high-speed digital, analog circuits, and memory cells. One of the major challenges to practical applications of the gigahertz oscillator is generating a stable oscillation process from the gigahertz oscillators and then maintaining the stable process for a specified period of time. To address this challenge, an oscillator from a triple-walled CNT-based rotary system is proposed and analyzed numerically in this paper, using a molecular dynamics approach. In this system, the outer tube is fixed partly as a stator. The middle tube, with a constant rotation, is named Rotor 2 and runs in the stator. The inner tube acts as Rotor 1, which can rotate freely in Rotor 2. Due to the friction between the two rotors when they have relative motion, the rotational frequency of Rotor 1 increases continuously and tends to converge with that of Rotor 2. During rotation, the oscillation of Rotor 1 may be excited owing to both a strong end barrier at Rotor 2 and thermal vibration of atoms in the tubes. From the discussion on the effects of length of Rotor 1, temperature, and input rotational frequency of Rotor 2 on the dynamic response of Rotor 1, an effective way to control the oscillation of Rotor 1 is found. Being much longer than Rotor 2, Rotor 1 will have perfect oscillation, i.e., with both stable (or nearly constant) period and amplitude—especially at relatively low temperature. This discovery can be taken as a useful guidance for the design of an oscillator from CNTs. read less USED (high confidence) C. Rubio-Verdú et al., “Graphene flakes obtained by local electro-exfoliation of graphite with a STM tip.,” Physical chemistry chemical physics : PCCP. 2017. link Times cited: 8 Abstract: Graphite surfaces can be manipulated by several methods to c… read moreAbstract: Graphite surfaces can be manipulated by several methods to create graphene structures of different shapes and sizes. Scanning tunneling microscopy (STM) can be used to create these structures either through mechanical contact between the tip and the surface or through electro-exfoliation. In the latter, the mechanisms involved in the process of exfoliation at an applied voltage are not fully understood. Here, we show how a graphite surface can be locally exfoliated in a systematic manner by applying an electrostatic force with a STM tip at the edge of a terrace, forming triangular flakes several nanometers in length. We demonstrate, through experiments and simulations, how these flakes are created by a two-step process: first a voltage ramp must be applied at the edge of the terrace, and then the tip must be scanned perpendicular to the edge. Ab initio electrostatic calculations reveal that the presence of charges on the graphite surface weakens the interaction between layers allowing for exfoliation at voltages in the same range as those used experimentally. Molecular dynamics simulations show that a force applied locally on the edge of a step produces triangular flakes such as those observed under STM. Our results provide new insights into surface modification that can be extended to other layered materials. read less USED (high confidence) R. Tu, Q. Liao, L. Zeng, Z. Liu, and W. Liu, “Impact of torsion and stretching on the thermal conductivity of polyethylene strands,” Applied Physics Letters. 2017. link Times cited: 19 Abstract: A single polyethylene chain was reported to have a high meta… read moreAbstract: A single polyethylene chain was reported to have a high metal-like thermal conductivity (TC), which stands in sharp contrast to the thermally insulating feature of common bulk polyethylene materials. This work numerically investigates the impact of torsion and stretching on the TC of polyethylene strands by using equilibrium molecular dynamics simulations. The simulation results show that torsion slightly reduces the TC of a single polyethylene chain. In contrast, the heat conduction of polyethylene strands could be slightly enhanced under torsional loading with a specific torsional angle. Particularly, an apparent improvement of TC of polyethylene strands is achieved by combining torsion and stretching functions. It is found that the TC of torsional polyethylene strands is sensitive to torsional patterns. Our study proposes a specific torsional pattern of polyethylene strands that significantly enhances the heat conduction of the original counterpart. This study will play an essential role in guiding the... read less USED (high confidence) A. Fattahi and B. Safaei, “Buckling analysis of CNT-reinforced beams with arbitrary boundary conditions,” Microsystem Technologies. 2017. link Times cited: 45 USED (high confidence) A. Fattahi and B. Safaei, “Buckling analysis of CNT-reinforced beams with arbitrary boundary conditions,” Microsystem Technologies. 2017. link Times cited: 0 USED (high confidence) Q. Liu, L. Li, H. Zhang, Q. Huang, G. Zhang, and Z. Hou, “Investigation on the Graphitization Process of Amorphous Carbon for HAMR by Molecular Dynamics Simulation,” IEEE Transactions on Magnetics. 2017. link Times cited: 6 Abstract: Molecular dynamics simulations are performed to investigate … read moreAbstract: Molecular dynamics simulations are performed to investigate the laser-induced graphitization of amorphous carbon (a-C) films at different densities for heat-assisted magnetic recording. Physical insights into the graphitization caused by laser heating are provided by analyzing the virial pressure, bond angle distribution, radial distribution function, pair distribution function, and atomic strains during the laser heating and cooling process. The effects of density and laser irradiation times on the graphitization of a-C films are investigated. The laser-induced ultrafast nonthermal phase transformation occurs in the heating process. The sp3–sp2 transformation is mainly contributed by the atoms in sp3–sp3 bonds both in the heating and cooling process. Less energy is required for those atoms to overcome the energy barrier. The atomic shear strains and volume strains can accelerate the sp3–sp2 transformation. For all a-C films at different densities, the rate of sp2-hybridized atoms increases rapidly in the first laser irradiation process. read less USED (high confidence) H. Li and J. Grossman, “Graphene Nanoribbon Based Thermoelectrics: Controllable Self‐ Doping and Long‐Range Disorder,” Advanced Science. 2017. link Times cited: 4 Abstract: Control of both the regularity of a material ensemble and na… read moreAbstract: Control of both the regularity of a material ensemble and nanoscale architecture provides unique opportunities to develop novel thermoelectric applications based on 2D materials. As an example, the authors explore the electronic and thermal properties of functionalized graphene nanoribbons (GNRs) in the single‐sheet and helical architectures using multiscale simulations. The results suggest that appropriate functionalization enables precise tuning of the doping density in a planar donor/acceptor GNR ensemble without the need to introduce an explicit dopant, which is critical to the optimization of power factor. In addition, the self‐interaction between turns of a GNR may induce long‐range disorder along the helical axis, which suppresses the thermal contribution from phonons with long wavelengths, leading to anomalous length independent phonon thermal transport in the quasi‐1D system. read less USED (high confidence) S. Verkhoturov, B. Czerwinski, D. Verkhoturov, S. Geng, A. Delcorte, and E. Schweikert, “Ejection-ionization of molecules from free standing graphene.,” The Journal of chemical physics. 2017. link Times cited: 8 Abstract: We present the first data on emission of C60- stimulated by … read moreAbstract: We present the first data on emission of C60- stimulated by single impacts of 50 keV C602+ on the self-assembled molecular layer of C60 deposited on free standing 2 layer graphene. The yield, Y, of C60- emitted in the transmission direction is 1.7%. To characterize the ejection and ionization of molecules, we have measured the emission of C60- from the surface of bulk C60 (Y = 3.7%) and from a single layer of C60 deposited on bulk pyrolytic graphite (Y = 3.3%). To gain insight into the mechanism(s) of ejection, molecular dynamic simulations were performed. The scenario of the energy deposition and ejection of molecules is different for the case of graphene due to the confined volume of projectile-analyte interaction. In the case of 50 keV C602+ impacts on graphene plus C60, the C atoms of the projectile collide with those of the target. The knocked-on atoms take on a part of the kinetic energy of the projectile atoms. Another part of the kinetic energy is deposited into the rim around the impact site. The ejection of molecules from the rim is a result of collective movement of the molecules and graphene membrane, where the membrane movement provides the impulse for ejection. The efficient emission of the intact molecular ions implies an effective ionization probability of intact C60. The proposed mechanism of ionization involves the tunneling of electrons from the vibrationally exited area around the hole to the ejecta. read less USED (high confidence) I. Giordanelli, M. Mendoza, and H. Herrmann, “Modelling electron-phonon interactions in graphene with curved space hydrodynamics,” Scientific Reports. 2017. link Times cited: 7 USED (high confidence) S. Chowdhury, S. Sockalingam, and J. Gillespie, “Molecular Dynamics Modeling of the Effect of Axial and Transverse Compression on the Residual Tensile Properties of Ballistic Fiber,” Fibers. 2017. link Times cited: 27 Abstract: Ballistic impact induces multiaxial loading on Kevlar® and p… read moreAbstract: Ballistic impact induces multiaxial loading on Kevlar® and polyethylene fibers used in protective armor systems. The influence of multiaxial loading on fiber failure is not well understood. Experiments show reduction in the tensile strength of these fibers after axial and transverse compression. In this paper, we use molecular dynamics (MD) simulations to explain and develop a fundamental understanding of this experimental observation since the property reduction mechanism evolves from the atomistic level. An all-atom MD method is used where bonded and non-bonded atomic interactions are described through a state-of-the-art reactive force field. Monotonic tension simulations in three principal directions of the models are conducted to determine the anisotropic elastic and strength properties. Then the models are subjected to multi-axial loads—axial compression, followed by axial tension and transverse compression, followed by axial tension. MD simulation results indicate that pre-compression distorts the crystal structure, inducing preloading of the covalent bonds and resulting in lower tensile properties. read less USED (high confidence) Y. Li, Q. Lin, and D. Cui, “Boundary-dependent mechanical properties of graphene annular under in-plane circular shearing via atomistic simulations,” Scientific Reports. 2017. link Times cited: 7 USED (high confidence) S. Mun, A. Bowman, S. Nouranian, S. Gwaltney, M. Baskes, and M. Horstemeyer, “Interatomic Potential for Hydrocarbons on the Basis of the Modified Embedded-Atom Method with Bond Order (MEAM-BO).,” The journal of physical chemistry. A. 2017. link Times cited: 18 Abstract: In this paper, we develop a new modified embedded atom metho… read moreAbstract: In this paper, we develop a new modified embedded atom method (MEAM) potential that includes the bond order (MEAM-BO) to describe the energetics of unsaturated hydrocarbons (double and triple carbon bonds) and also develop improved parameters for saturated hydrocarbons from those of our previous work. Such quantities like bond lengths, bond angles, and atomization energies at 0 K, dimer molecule interactions, rotational barriers, and the pressure-volume-temperature relationships of dense systems of small molecules give a comparable or more accurate property relative to experimental and first-principles data than the classical reactive force fields REBO and ReaxFF. Our extension of the MEAM potential for unsaturated hydrocarbons (MEAM-BO) is a step toward developing more reliable and accurate polymer simulations with their associated structure-property relationships, such as reactive multicomponent (organic/metal) systems, polymer-metal interfaces, and nanocomposites. When the constants for the BO are zero, MEAM-BO reduces to the original MEAM potential. As such, this MEAM-BO potential describing the interaction of organic materials with metals within the same MEAM formalism is a significant advancement for computational materials science. read less USED (high confidence) Y. J. Yu et al., “Epitaxially Self‐Assembled Alkane Layers for Graphene Electronics,” Advanced Materials. 2017. link Times cited: 22 Abstract: The epitaxially grown alkane layers on graphene are prepared… read moreAbstract: The epitaxially grown alkane layers on graphene are prepared by a simple drop-casting method and greatly reduce the environmentally driven doping and charge impurities in graphene. Multiscale simulation studies show that this enhancement of charge homogeneity in graphene originates from the lifting of graphene from the SiO2 surface toward the well-ordered and rigid alkane self-assembled layers. read less USED (high confidence) S. Srivastava et al., “Quantum transport localization through graphene,” Nanotechnology. 2017. link Times cited: 6 Abstract: Localization of atomic defect-induced electronic transport t… read moreAbstract: Localization of atomic defect-induced electronic transport through a single graphene layer is calculated using a full-valence electronic structure description as a function of the defect density and taking into account the atomic-scale deformations of the layer. The elementary electronic destructive interferences leading to Anderson localization are analyzed. The low-voltage current intensity decreases with increasing length and defect density, with a calculated localization length ζ = 3.5 nm for a defect density of 5%. The difference from the experimental defect density of 0.5% required for an oxide surface-supported graphene to obtain the same ζ is discussed, pointing out how interactions of the graphene supporting surface and surface chemical modifications also control electronic transport localization. read less USED (high confidence) B. Raghavan and T. Gupta, “H2/CH4 Gas Separation by Variation in Pore Geometry of Nanoporous Graphene,” Journal of Physical Chemistry C. 2017. link Times cited: 37 Abstract: We studied the behavior of H2 and CH4 flowing through variou… read moreAbstract: We studied the behavior of H2 and CH4 flowing through various pore geometries of nanoporous graphene using molecular dynamics method. Ten different geometries of pore-18, with different eccentricities, were prepared. It was found that the gas permeance and adsorption layer were heavily influenced by the eccentricity of the pores. On further investigation, it was also found that the jaggedness of the pore geometry played a role as well. It was also noted that at specific eccentricities, pore-18 exhibited hydrogen selective behavior, which was found to extend to pore-12, -14, -16, -20, -24, and -30 as well. Furthermore, it was shown that the H2 permeance of these pores can reach 9 times the value of that of pore-10 (which was previously found to be the only selective pore). Hence, these pores show H2 selectivity with high H2 yields. Thus, this study demonstrates the exciting possibility of creating highly efficient H2 separators by pore geometry variation. Recent experimental studies, which involve an atom-... read less USED (high confidence) Z. Zhang, A. Kutana, A. Roy, and B. Yakobson, “Nanochimneys: Topology and Thermal Conductance of 3D Nanotube–Graphene Cone Junctions,” Journal of Physical Chemistry C. 2017. link Times cited: 15 Abstract: Pillared 3D carbon architectures, with the graphene layers a… read moreAbstract: Pillared 3D carbon architectures, with the graphene layers and carbon nanotubes connected by topological junctions, have been produced and observed, as reported recently. However, the atomistic details of such junctions are hard to discern in microscopy and remain presently unclear. The simplest junction contains six heptagons in the transition region between the nanotube and graphene. Although these junctions make the pillared architectures possible, they are susceptible to failure when the whole structure undergoes mechanical or thermal stress. In this work we consider “nanochimneys”, a variety of special junctions with cones in between the nanotube and graphene parts. We explore the structures of the nanochimneys (NCs) and determine their underlying topological requirements. We also study the thermal conductance of these pillared architectures and show that NCs conduct heat better than regular simple junctions. read less USED (high confidence) Z. Qin, G. Jung, M. Kang, and M. Buehler, “The mechanics and design of a lightweight three-dimensional graphene assembly,” Science Advances. 2017. link Times cited: 333 Abstract: The mechanics of a lightweight three-dimensional graphene as… read moreAbstract: The mechanics of a lightweight three-dimensional graphene assembly, quantified by computational simulation and 3D printing, are discussed. Recent advances in three-dimensional (3D) graphene assembly have shown how we can make solid porous materials that are lighter than air. It is plausible that these solid materials can be mechanically strong enough for applications under extreme conditions, such as being a substitute for helium in filling up an unpowered flight balloon. However, knowledge of the elastic modulus and strength of the porous graphene assembly as functions of its structure has not been available, preventing evaluation of its feasibility. We combine bottom-up computational modeling with experiments based on 3D-printed models to investigate the mechanics of porous 3D graphene materials, resulting in new designs of carbon materials. Our study reveals that although the 3D graphene assembly has an exceptionally high strength at relatively high density (given the fact that it has a density of 4.6% that of mild steel and is 10 times as strong as mild steel), its mechanical properties decrease with density much faster than those of polymer foams. Our results provide critical densities below which the 3D graphene assembly starts to lose its mechanical advantage over most polymeric cellular materials. read less USED (high confidence) Y. Park, S. Hyun, and M. Chun, “Grain Size Effect on Mechanical Properties of Polycrystalline Graphene.” 2016. link Times cited: 4 Abstract: Characteristics of nanocrystalline materials are known subst… read moreAbstract: Characteristics of nanocrystalline materials are known substantially dependent on the microstructure such as grain size, crystal orientation, and grain boundary. Thus it is desired to have systematic characterization methods on the various nanomaterials with complex geometries, especially in low dimensional nature. One of the interested nanomaterials would be a pure two-dimensional material, graphene, with superior mechanical, thermal, and electrical properties. In this study, mechanical properties of “polycrystalline” graphene were numerically investigated by molecular dynamics simulations. Subdomains with various sizes would be generated in the polycrystalline graphene during the fabrication such as chemical vapor deposition process. The atomic models of polycrystalline graphene were generated using Voronoi tessellation method. Stress strain curves for tensile deformation were obtained for various grain sizes (5~40 nm) and their mechanical properties were determined. It was found that, as the grain size increases, Young`s modulus increases showing the reverse Hall-Petch effect. However, the fracture strain decreases in the same region, while the ultimate tensile strength (UTS) rather shows slight increasing behavior. We found that the polycrystalline graphene shows the reverse Hall-Petch effect over the simulated domain of grain size (< 40 nm). read less USED (high confidence) V. Demin et al., “C60 fullerene decoration of carbon nanotubes,” Journal of Experimental and Theoretical Physics. 2016. link Times cited: 2 USED (high confidence) C. Yi, X. Chen, L. Zhang, X. Wang, and C. Ke, “Nanomechanical z-shape folding of graphene on flat substrate,” Extreme Mechanics Letters. 2016. link Times cited: 13 USED (high confidence) N. Borgardt, A. Prihodko, and M. Seibt, “The influence of the atomic structure of basal planes on interplanar distance in pyrolytic carbon materials,” Technical Physics Letters. 2016. link Times cited: 5 USED (high confidence) S. Ajori, R. Ansari, and H. Parsapour, “Buckling analysis of defective cross-linked functionalized single- and double-walled carbon nanotubes with polyethylene chains using molecular dynamics simulations,” Journal of Molecular Modeling. 2016. link Times cited: 3 USED (high confidence) A. Georgi et al., “Tuning the Pseudospin Polarization of Graphene by a Pseudomagnetic Field.,” Nano letters. 2016. link Times cited: 104 Abstract: One of the intriguing characteristics of honeycomb lattices … read moreAbstract: One of the intriguing characteristics of honeycomb lattices is the appearance of a pseudomagnetic field as a result of mechanical deformation. In the case of graphene, the Landau quantization resulting from this pseudomagnetic field has been measured using scanning tunneling microscopy. Here we show that a signature of the pseudomagnetic field is a local sublattice symmetry breaking observable as a redistribution of the local density of states. This can be interpreted as a polarization of graphene's pseudospin due to a strain induced pseudomagnetic field, in analogy to the alignment of a real spin in a magnetic field. We reveal this sublattice symmetry breaking by tunably straining graphene using the tip of a scanning tunneling microscope. The tip locally lifts the graphene membrane from a SiO2 support, as visible by an increased slope of the I(z) curves. The amount of lifting is consistent with molecular dynamics calculations, which reveal a deformed graphene area under the tip in the shape of a Gaussian. The pseudomagnetic field induced by the deformation becomes visible as a sublattice symmetry breaking which scales with the lifting height of the strained deformation and therefore with the pseudomagnetic field strength. Its magnitude is quantitatively reproduced by analytic and tight-binding models, revealing fields of 1000 T. These results might be the starting point for an effective THz valley filter, as a basic element of valleytronics. read less USED (high confidence) Y. Zhang, Q. Pei, Y. Mai, and S. Lai, “Interfacial thermal conductance in multilayer graphene/phosphorene heterostructure,” Journal of Physics D: Applied Physics. 2016. link Times cited: 17 Abstract: Vertical integration of 2D materials has recently appeared a… read moreAbstract: Vertical integration of 2D materials has recently appeared as an effective method for the design of novel nano-scale devices. Using non-equilibrium molecular dynamics simulations, we study the interfacial thermal transport property of graphene/phosphorene heterostructures where phosphorene is sandwiched in between graphene. Various modulation techniques are thoroughly explored. We found that the interfacial thermal conductance at the interface of graphene and phosphorene can be enhanced significantly by using vacancy defects, hydrogenation and cross-plane compressive strain. By contrast, the reduction in the interfacial thermal conductance can be achieved by using cross-plane tensile strain. Our results provide important guidelines for manipulating the thermal transport in graphene/phosphorene based-nano-devices. read less USED (high confidence) Y. Wang and Z. Liu, “The fracture toughness of graphene during the tearing process,” Modelling and Simulation in Materials Science and Engineering. 2016. link Times cited: 21 Abstract: The fracture toughness of single-crystal graphene and bi-cry… read moreAbstract: The fracture toughness of single-crystal graphene and bi-crystal graphene with different misorientation angles is investigated by molecular dynamics simulation. We find that the fracture toughness fluctuates when a crack propagates across the grain boundary. It indicates that the grain boundary affects the fracture toughness during the fracture process. The affected region on the graphene is limited to a small zone around the grain boundary. However, for the complete tearing-failure case, fracture toughness of bi-crystal graphene is approximate to that of single-crystal graphene, which implies that the fracture toughness is not very sensitive to the grain boundary. For comparison, the tensile fracture simulations of the single-crystal graphene and bi-crystal graphene are carried out. The results show that the grain boundaries block the crack propagation and affect fracture toughness significantly in bi-crystal graphene under tensile force. Furthermore, we analyze the fracture of a single C–C bond at the crack tip of single-crystal graphene under tearing load from the atomic view. We find that the fracture toughness of the single C–C bond occupies about half of the fracture toughness for the complete failure of the total single-crystal graphene, and the other half energy distributes in the rest of the graphene. read less USED (high confidence) H. Zhan, G. Zhang, J. Bell, and Y. T. Gu, “The morphology and temperature dependent tensile properties of diamond nanothreads,” Carbon. 2016. link Times cited: 40 USED (high confidence) N. Gupta, V. Artyukhov, E. Penev, and B. Yakobson, “Carbonization with Misfusion: Fundamental Limits of Carbon‐Fiber Strength Revisited,” Advanced Materials. 2016. link Times cited: 29 Abstract: D-loops, a new type of structural defect in carbon fibers, a… read moreAbstract: D-loops, a new type of structural defect in carbon fibers, are presented, which have highly detrimental effect on their mechanical properties and can define a new fundamental upper limit to their strength. These defects form exclusively during polyacrylonitrile carbonization, act as stress concentrators in the graphitic basal plane, and cannot be removed by local annealing. read less USED (high confidence) T. Li, J. Li, L. Wang, Y. Duan, and H. Li, “Coalescence of Immiscible Liquid Metal Drop on Graphene,” Scientific Reports. 2016. link Times cited: 34 USED (high confidence) S. Ebrahimi, “Effect of hydrogen coverage on the buckling of penta-graphene by molecular dynamics simulation,” Molecular Simulation. 2016. link Times cited: 7 Abstract: By employing a series of MD simulations, buckling behaviour … read moreAbstract: By employing a series of MD simulations, buckling behaviour of penta-graphene and functionalised penta-graphene having different hydrogen (H) coverage is presented in this study. To this end, the buckling onset strain is determined for different systems. The results reveal that the new allotrope is slightly stiffer than graphene. Moreover, the effect of H adatoms in the range 0–56% on buckling behaviour is investigated. Finally it is shown that the H coverage has an influence on stability, and ripple-type destortion of the penta-graphene under compression. read less USED (high confidence) A. Weerasinghe, A. Muniz, A. Ramasubramaniam, and D. Maroudas, “Mechanical properties of hydrogenated electron-irradiated graphene,” Journal of Applied Physics. 2016. link Times cited: 11 Abstract: We report a systematic analysis on the effects of hydrogenat… read moreAbstract: We report a systematic analysis on the effects of hydrogenation on the mechanical behavior of irradiated single-layer graphene sheets, including irradiation-induced amorphous graphene, based on molecular-dynamics simulations of uniaxial tensile straining tests and using an experimentally validated model of electron-irradiated graphene. We find that hydrogenation has a significant effect on the tensile strength of the irradiated sheets only if it changes the hybridization of the hydrogenated carbon atoms to sp3, causing a reduction in the strength of irradiation-induced amorphous graphene by ∼10 GPa. Hydrogenation also causes a substantial decrease in the failure strain of the defective sheets, regardless of the hybridization of the hydrogenated carbon atoms, and in their fracture toughness, which decreases with increasing hydrogenation for a given irradiation dose. We characterize in detail the fracture mechanisms of the hydrogenated irradiated graphene sheets and elucidate the role of hydrogen and the ex... read less USED (high confidence) S. Sadeghzadeh and N. Rezapour, “The mechanical design of graphene nanodiodes and nanotransistors: geometry, temperature and strain effects,” RSC Advances. 2016. link Times cited: 22 Abstract: The technique of laminating one or several layers of graphen… read moreAbstract: The technique of laminating one or several layers of graphene on a substrate and making a bridge of small dimensions and then measuring the changes in the electrical properties of the circuit obtained from this connection has raised the hopes of miniaturizing electronic devices even further. Due to the importance of this subject and the need to mechanically design such systems before signal-taking, in this paper, the effects of geometry, temperature and mechanical deformations on the mechanical properties of graphene nanodiodes and nanotransistors have been studied by employing the molecular dynamics method. A tensile test has been used as a suitable means of measuring the mechanical properties of suspended graphene sheets and graphene nanodiodes, and a virtual indentation test has been employed for zigzag and armchair transistors. After validating the method used by comparing it to former works, the most important finding for the diode case reveals that by increasing the rectification angle from zero to 90°, the modulus of elasticity drops from 1.092 to 0.79 TPa for certain dimensions; which is a reduction of 27.65%. In the graphene transistor, the modulus of elasticity increases with the increase of transistor width. Nevertheless, in stark contrast to armchair transistors, the difference between the mechanical properties of zigzag transistors and suspended graphene becomes greater as the transistor length increases. In general, the square transistor enjoys the highest modulus of elasticity and, thus, the best stiffness; while such square graphene sheets are ruptured at lower strains and stresses, compared to other graphene transistor dimensions. read less USED (high confidence) E. Koukaras, C. Androulidakis, G. Anagnostopoulos, K. Papagelis, and C. Galiotis, “Compression behavior of simply-supported and fully embedded monolayer graphene: Theory and experiment,” Extreme Mechanics Letters. 2016. link Times cited: 14 USED (high confidence) A. Georgi et al., “Apparent rippling with honeycomb symmetry and tunable periodicity observed by scanning tunneling microscopy on suspended graphene,” Physical Review B. 2016. link Times cited: 1 Abstract: Suspended graphene is difficult to image by scanning probe m… read moreAbstract: Suspended graphene is difficult to image by scanning probe microscopy due to the inherent van-der-Waals and dielectric forces exerted by the tip which are not counteracted by a substrate. Here, we report scanning tunneling microscopy data of suspended monolayer graphene in constant-current mode revealing a surprising honeycomb structure with amplitude of 50$-$200 pm and lattice constant of 10-40 nm. The apparent lattice constant is reduced by increasing the tunneling current $I$, but does not depend systematically on tunneling voltage $V$ or scan speed $v_{\rm scan}$. The honeycomb lattice of the rippling is aligned with the atomic structure observed on supported areas, while no atomic corrugation is found on suspended areas down to the resolution of about $3-4$ pm. We rule out that the honeycomb structure is induced by the feedback loop using a changing $v_{\rm scan}$, that it is a simple enlargement effect of the atomic resolution as well as models predicting frozen phonons or standing phonon waves induced by the tunneling current. Albeit we currently do not have a convincing explanation for the observed effect, we expect that our intriguing results will inspire further research related to suspended graphene. read less USED (high confidence) C. M. Shumeyko, E. Webb, and G. Tucker, “Effects of grain boundary structure on lithium transport in graphite,” Molecular Simulation. 2016. link Times cited: 3 Abstract: Molecular dynamics simulations are used to investigate lithi… read moreAbstract: Molecular dynamics simulations are used to investigate lithium (Li) transport rates in symmetric tilt graphite grain boundaries (GBs). Experiments have quantified highly varied diffusion rates of Li in graphite and recent computational work exposed similar differences in Li intercalation rates into GBs from a free surface. This work extends findings of intercalation studies to provide explanations for various rates and uses said differences to predict bulk GB transport behavior. Various structural properties are presented for graphite GBs, including bond angles, bond order, and free volume analysis which is rarely presented in covalent systems. The importance of free volume connectivity is also discussed as is Li structure in GBs. read less USED (high confidence) Y.-Z. Yu and J.-G. Guo, “Static and dynamic theoretical analyses of a scanning tip on suspended graphene surface,” Journal of Applied Physics. 2016. link Times cited: 2 Abstract: Recent research progress shows that graphene exhibits distin… read moreAbstract: Recent research progress shows that graphene exhibits distinct adhesion and friction behaviors. In the paper, the static and dynamic analyses of a diamond tip sliding on suspended graphene surface are conducted via theoretical and numerical research methods, and the adhesion and friction properties between them are investigated. The analytical expression of interaction potential between a diamond tip and graphene surface is derived based on the interatomic pairwise potential, and then, the lateral and normal interaction forces are calculated. The equilibrium heights and adhesion energy of the diamond tip are calculated on three particular sites of graphene surface. The influence of vertical distance between the tip and graphene surface is studied on the maximum static frictional force and initial velocity of tip. What is more, the influence of scanning velocity and damping are also analyzed on the frictional force and dynamic behaviors of the scanning tip, and the “stick-slip” phenomenon is observed and d... read less USED (high confidence) S. Sadeghzadeh and M. M. Khatibi, “Effects of physical boundary conditions on the transverse vibration of single-layer graphene sheets,” Applied Physics A. 2016. link Times cited: 16 USED (high confidence) S. Sadeghzadeh and M. M. Khatibi, “Effects of physical boundary conditions on the transverse vibration of single-layer graphene sheets,” Applied Physics A. 2016. link Times cited: 0 USED (high confidence) Q. Liu, G. Zhang, H. Zhang, Z. Hou, and L. Li, “Molecular dynamic simulation on the graphitization of amorphous carbon induced by laser irradiation,” 2016 Asia-Pacific Magnetic Recording Conference Digest (APMRC). 2016. link Times cited: 1 Abstract: In this work, we use MD simulation to model the graphitizati… read moreAbstract: In this work, we use MD simulation to model the graphitization process of a-C film by laser heating in heat-assisted magnetic recording. The amorphous carbon is heated to 800K and cooled down to room temperature within nanosecond. During the laser heating and cooling process, the rate of the sp2-hybridized atoms rate keeps increasing from 16% to 68%. The trend of sp2 hybridized atoms rate is analogous with the pressure of the system. The pressure is an essential ingredient in the graphitization of amorphous carbon. read less USED (high confidence) T. Zhu and E. Ertekin, “Phonons, Localization, and Thermal Conductivity of Diamond Nanothreads and Amorphous Graphene.,” Nano letters. 2016. link Times cited: 121 Abstract: Recently, the domains of low-dimensional (low-D) materials a… read moreAbstract: Recently, the domains of low-dimensional (low-D) materials and disordered materials have been brought together by the demonstration of several new low-D, disordered systems. The thermal transport properties of these systems are not well-understood. Using amorphous graphene and glassy diamond nanothreads as prototype systems, we establish how structural disorder affects vibrational energy transport in low-dimensional, but disordered, materials. Modal localization analysis, molecular dynamics simulations, and a generalized model together demonstrate that the thermal transport properties of these materials exhibit both similarities and differences from disordered 3D materials. In analogy with 3D, the low-D disordered systems exhibit both propagating and diffusive vibrational modes. In contrast to 3D, however, the diffuson contribution to thermal transport in these low-D systems is shown to be negligible, which may be a result of inherent differences in the nature of random walks in lower dimensions. Despite the lack of diffusons, the suppression of thermal conductivity due to disorder in low-D systems is shown to be mild or comparable to 3D. The mild suppression originates from the presence of low-frequency vibrational modes that maintain a well-defined polarization and help preserve the thermal conductivity in the presence of disorder. read less USED (high confidence) E. Lomba, C. Bores, R. Notario, and V. Sánchez-Gil, “An integral equation and simulation study of hydrogen inclusions in a molecular crystal of short-capped nanotubes,” Journal of Physics: Condensed Matter. 2016. link Times cited: 1 Abstract: In this work we have assessed the ability of a recently prop… read moreAbstract: In this work we have assessed the ability of a recently proposed three-dimensional integral equation approach to describe the explicit spatial distribution of molecular hydrogen confined in a crystal formed by short-capped nanotubes of C50 H10. To that aim we have resorted to extensive molecular simulation calculations whose results have been compared with our three-dimensional integral equation approximation. We have first tested the ability of a single C50 H10 nanocage for the encapsulation of H2 by means of molecular dynamics simulations, in particular using targeted molecular dynamics to estimate the binding Gibbs energy of a host hydrogen molecule inside the nanocage. Then, we have investigated the adsorption isotherm of the nanocage crystal using grand canonical Monte Carlo simulations in order to evaluate the maximum load of molecular hydrogen. For a packing close to the maximum load explicit hydrogen density maps and density profiles have been determined using molecular dynamics simulations and the three-dimensional Ornstein–Zernike equation with a hypernetted chain closure. In these conditions of extremely tight confinement the theoretical approach has shown to be able to reproduce the three-dimensional structure of the adsorbed fluid with accuracy down to the finest details. read less USED (high confidence) A. P’alink’as et al., “Moiré superlattices in strained graphene-gold hybrid nanostructures,” Carbon. 2016. link Times cited: 13 USED (high confidence) Y. Lu and J. Qian, “Nanoindentation Response of Polycrystalline Graphene by Atomistic Simulations.” 2016. link Times cited: 0 Abstract: Nanoindentation has been widely used to determine the mechan… read moreAbstract: Nanoindentation has been widely used to determine the mechanical properties of pristine and polycrystalline graphene in experiments. To investigate the effects of grain size on the mechanical properties of polycrystalline graphene, we use molecular dynamics simulations to study the nanoindentation response of suspended polycrystalline graphene layer. The force-displacement behavior from the simulations enables the interpretation of Young’s modulus and breaking strength of the 2D material, which are exhibited to strongly depend on the grain size. Introduction Pristine graphene with perfectly hexagonal carbon rings exhibits extraordinary mechanical properties. However, large-scale monolayers of graphene grown by chemical vapor deposition (CVD) usually contain topological defects and grain boundaries, which might strongly influence the apparent properties of the 2D material. There have been increasing experimental and simulation studies on the stiffness and strength of polycrystalline graphene. For example, atomic force microscopy (AFM) has been employed to measure the mechanical properties of monolayer-graphene in a nanoindentation setup, leading to the interpretation of 2D elastic modulus and breaking strength, respectively [1,2]. Both pristine and polycrystalline graphene (with varying grain sizes) have been measured by nanoindentation in AFM, and it was shown that the stiffness and failure load of poly-graphene are comparable with those of pristine graphene, despite the existence of grain boundaries [2]. In contrast, some other studies showed that grain boundaries severely reduce the elastic modulus and fracture strength of graphene [3,4]. For nanoindentation technique, the experimental measuremens and simulation predictions on the modulus and strength of polycrystalline graphene were found to be scattered widely [5-8], which were also different from those by uniaxial tension [9,10]. This work aims to explore the role of grain size in influencing the mechanical properities of polycrystalline graphene. Molecular dynamics (MD) simulations are employed to perform the nanoindentation test in mimicking the experimental measurements in AFM. Indentation of Polycrystalline Graphene: Atomistic Simulations In experiments, polycrystalline graphene is usually generated by chemical vapor deposition, in which the growth of graphene monolayers starts from multiple nucleation sites simultaneously. As such, the orientations of individual grains rely on the local nucleation sites and are randomly distributed [11]. To account for such growth, we perform computational procedure to generate a certain number N of randomly placed seeds within a square region, and use Voronoi tessellation method to divide the area into N polygons. Each polygon is filled by a pristine graphene fragment with a random orientation angle θi, which is represented by the angle between the armchair direction and the horizontal direction. Owing to the hexagonal honeycomb structure of graphene, the angle θi falls into the range between –π/6 and π/6. The atoms near grain boundary junctions that are closer than 1.4 Å to any 2nd Annual International Conference on Advanced Material Engineering (AME 2016) © 2016. The authors Published by Atlantis Press 215 neighboring grains are removed. This treatment is based on the observation that the system with grain boundary atoms closer than this value is unstable. In this way, the coordinates of all carbon atoms in polycrystalline graphene are generated within a simulation cell (selected as 20 nm by 20 nm). Fig. 1(a) shows the topological structure of a polycrystalline graphene sample with the mean grain size of 2 nm, which contains 127 grains in total. A circular region with radius R is selected from the sample for nanoindentation simulations, in which the atoms along the periphery are fixed as boundary condition (Fig. 1(b)). We confirm that the distribution of misorientation angle from this sample preparation resembles a random distribution, meaning that there is no preferred orientation for the grains (Fig. 1(c)). The distribution of grain size is Gaussian with the average value of 2 nm, as shown in Fig. 1(d). The polycrystalline graphene samples with varying grain sizes can be readily produced by changing the number N of nucleation sites within the given area. Fig. 1 (a) The topological structure of polycrystalline graphene with the average grain size of 2 nm. The simulation cell (20 nm by 20 nm) contains 127 grains that are randomly oriented. Colors in the figure are used to distinguish neighboring grains. (b) Nanoindentation simulation of a suspended polycrystalline graphene layer. The atoms along the periphery (in black) are fixed during the simulation, and the color bar represents the energy of the atoms. The distributions of (c) the misorientation angle and (d) the grain size of the sample in (a). Next, we use molecular dynamics simulations to study the nanoindentation behavior of such polycrystalline graphene. A circular membrane of polycrystalline graphene (Radius: R = 10 nm) is perpendicularly indented by a hemispherical diamond tip (Radius: r = 1 nm) at the membrane center, as shown in Fig. 1(b). Our nanoindentation simulations were performed at constant atom number (N), volume (V) and temperature (T) (i.e., NVT ensemble) by using the large-scale atomic/molecular massively parallel simulator (LAMMPS). The system temperature was maintained at 1 K by employing Nos’e-Hoover thermostat, and the initial velocities of atoms in each direction were extracted from Gaussian distribution for the given temperature. The adaptive intermolecular reactive empirical bond order (AIREBO) potential [12] was used for carbon-carbon interaction in the simulations, with a switch function parameter 2.0 Å for the breakage of C-C bonds [13]. For the atomic-scale interaction between the atoms from the indenter tip and graphene layer, respectively, Lennard-Jones potential was used to describe the van der Walls type interaction, namely, read less USED (high confidence) V. Polukhin and E. Kurbanova, “Thermal stability of Ag, Al, Sn, Pb, and Hg films reinforced by 2D (C, Si) crystals and the formation of interfacial fluid states in them upon heating. MD experiment,” Russian Metallurgy (Metally). 2016. link Times cited: 3 USED (high confidence) A. Galashev and V. Polukhin, “Computer simulation of heating of nickel and mercury on graphene,” Russian Metallurgy (Metally). 2016. link Times cited: 0 USED (high confidence) A. Pedrielli, S. Taioli, G. Garberoglio, and N. Pugno, “Designing graphene based nanofoams with nonlinear auxetic and anisotropic mechanical properties under tension or compression,” Carbon. 2016. link Times cited: 44 USED (high confidence) A. Sgouros, A. Sgouros, G. Kalosakas, G. Kalosakas, C. Galiotis, and K. Papagelis, “Uniaxial compression of suspended single and multilayer graphenes,” 2D Materials. 2016. link Times cited: 19 Abstract: The mechanical response of single and multiple graphene shee… read moreAbstract: The mechanical response of single and multiple graphene sheets under uniaxial compressive loads was studied with molecular dynamics (MD) simulations, using different semi-empirical force fields at different boundary conditions or constrains. Compressive stress–strain curves were obtained and the critical stress/strain values were derived. The MD results are compared to the linear elasticity continuum theory for loaded slabs. Concerning the length dependence of critical values, qualitatively similar behavior is observed between the theory and numerical simulations for single layer graphenes, as the critical stress/strain for buckling was found to scale to the inverse squared length. However discrepancies were noted for multilayer graphenes, where the critical buckling stress also decreased with increasing length, though at a slower rate than expected from elastic buckling analysis. read less USED (high confidence) L. Yi et al., “Mechanical properties of graphynes under shearing and bending,” Journal of Applied Physics. 2016. link Times cited: 18 Abstract: Graphynes are the allotrope of graphene. In this work, exten… read moreAbstract: Graphynes are the allotrope of graphene. In this work, extensive molecular dynamics simulations are performed on four different graphynes ( α-, β-, γ-, and 6,6,12-graphynes) to explore their mechanical properties (shear modulus, shear strength, and bending rigidity) under shearing and bending. While the shearing properties are anisotropic, the bending rigidity is almost independent of the chirality of graphynes. We also find that the shear modulus and shear fracture strength of graphynes decrease with increasing temperature. The effect of the percentage of the acetylenic linkages on the shear mechanical properties and bending rigidity is investigated. It is shown that the fracture shear strengths and bending rigidities of the four types of graphynes decrease, while the fracture shear strain increases, with increasing percentages of the acetylenic linkages. Significant wrinkling is observed in graphyne under shear strain. The influence of the temperatures and percentages of the acetylenic linkages on the r... read less USED (high confidence) E. Sandoz-Rosado, T. D. Beaudet, R. Balu, and E. D. Wetzel, “Designing molecular structure to achieve ductile fracture behavior in a stiff and strong 2D polymer, ‘graphylene’.,” Nanoscale. 2016. link Times cited: 11 Abstract: As the simplest two-dimensional (2D) polymer, graphene has i… read moreAbstract: As the simplest two-dimensional (2D) polymer, graphene has immensely high intrinsic strength and elastic stiffness but has limited toughness due to brittle fracture. We use atomistic simulations to explore a new class of graphene/polyethylene hybrid 2D polymer, "graphylene", that exhibits ductile fracture mechanisms and has a higher fracture toughness and flaw tolerance than graphene. A specific configuration of this 2D polymer hybrid, denoted "GrE-2" for the two-carbon-long ethylene chains connecting benzene rings in the inherent framework, is prioritized for study. MD simulations of crack propagation show that the energy release rate to propagate a crack in GrE-2 is twice that of graphene. We also demonstrate that GrE-2 exhibits delocalized failure and other energy-dissipating fracture mechanisms such as crack branching and bridging. These results demonstrate that 2D polymers can be uniquely tailored to achieve a balance of fracture toughness with mechanical stiffness and strength. read less USED (high confidence) S. E. Muller and A. Nair, “Dislocation Nucleation in Nickel-Graphene Nanocomposites Under Mode I Loading,” JOM. 2016. link Times cited: 18 USED (high confidence) A. Shekhawat, C. Ophus, and R. Ritchie, “A generalized Read–Shockley model and large scale simulations for the energy and structure of graphene grain boundaries,” RSC Advances. 2016. link Times cited: 12 Abstract: The grain boundary (GB) energy is a quantity of fundamental … read moreAbstract: The grain boundary (GB) energy is a quantity of fundamental importance for understanding several key properties of graphene. Here we present a comprehensive theoretical and numerical study of the entire space of symmetric and asymmetric graphene GBs. We have simulated over 79 000 graphene GBs to explore the configuration space of GBs in graphene. We use a generalized Read–Shockley theory and the Frank–Bilby relation to develop analytical expressions for the GB energy as a function of the misorientation angle and the line angle, and elucidate the salient structural features of the low energy GB configurations. read less USED (high confidence) Q. Zhao, Z. Xu, Y. Hu, F. Ding, and J. Zhang, “Chemical vapor deposition synthesis of near-zigzag single-walled carbon nanotubes with stable tube-catalyst interface,” Science Advances. 2016. link Times cited: 58 Abstract: Enriching near-zigzag single-walled carbons, which have a sm… read moreAbstract: Enriching near-zigzag single-walled carbons, which have a small tube-catalyst interface, by a “tandem plate” CVD method. Chemical vapor deposition (CVD) growth is regarded as the most promising method for realizing structure-specific single-walled carbon nanotube (SWNT) growth. In the past 20 years, many efforts dedicated to chirality-selective SWNT growth using various strategies have been reported. However, normal CVD growth under constant conditions could not fully optimize the chirality because the randomly formed cap structure allows the nucleation of all types of SWNTs and the chirality of an SWNT is unlikely to be changed during the following elongation process. We report a new CVD process that allows temperature to be periodically changed to vary SWNT chirality multiple times during elongation to build up the energetically preferred SWNT-catalyst interface. With this strategy, SWNTs with small helix angles (less than 10°), which are predicted to have lower interfacial formation energy than others, are enriched up to ~72%. Kinetic analysis of the process suggests a multiple redistribution feature whereby a large chiral angle SWNT tends to reach the near-zigzag chirality step by step with a small chiral angle change at each step, and hence, we named this method “tandem plate CVD.” This method opens a door to synthesizing chirality-selective SWNTs by rational catalyst design. read less USED (high confidence) S. Sadeghzadeh, “Equivalent mechanical boundary conditions for single layer graphene sheets,” Micro & Nano Letters. 2016. link Times cited: 17 Abstract: To describe and analyse mechanical structures due to externa… read moreAbstract: To describe and analyse mechanical structures due to external loads, equation of motion must be supplemented with appropriate boundary conditions. When nanomechanical structures (especially layered systems) are considered, satisfying the boundaries is more challenging. It may be essential to develop a specific methodology for any system in such scale and configuration. This work introduces a general approach for boundary conditions of monolayer graphene sheets as the most important part of future sensors and resonators in nanoelectromechanical systems. Comparing with the experiments, it has been demonstrated that the graphene sheets on the adhesive surfaces should be assumed as a hinged edge condition and not as a clamped one. As a result, inaccuracy of the commonly used rigid base as a clamped condition is proven due to comparison with a reported experiment. It is suggested that a flexible substrate can be replaced to have better accordance. A flexible silicon base with equilibrium distance equal to s = 2.5 A and depth of potential well equal to e = 0.02 eV is obtained as the best substrate for a square graphene sheet under doubly clamped edge conditions. read less USED (high confidence) Y. Gao, Y. Chen, C. Zhong, Z. Zhang, Y. Xie, and S. Zhang, “Electron and phonon properties and gas storage in carbon honeycombs.,” Nanoscale. 2016. link Times cited: 42 Abstract: A new kind of three-dimensional carbon allotrope, termed car… read moreAbstract: A new kind of three-dimensional carbon allotrope, termed carbon honeycomb (CHC), has recently been synthesized [PRL 116, 055501 (2016)]. Based on the experimental results, a family of graphene networks has been constructed, and their electronic and phonon properties are studied by various theoretical approaches. All networks are porous metals with two types of electron transport channels along the honeycomb axis and they are isolated from each other: one type of channel originates from the orbital interactions of the carbon zigzag chains and is topologically protected, while the other type of channel is from the straight lines of the carbon atoms that link the zigzag chains and is topologically trivial. The velocity of the electrons can reach ∼10(6) m s(-1). Phonon transport in these allotropes is strongly anisotropic, and the thermal conductivities can be very low when compared with graphite by at least a factor of 15. Our calculations further indicate that these porous carbon networks possess high storage capacity for gaseous atoms and molecules in agreement with the experiments. read less USED (high confidence) L. Wang, X.-Y. Li, X. Zhou, Y. Li, and H. Li, “Drop formation and coalescence of liquid Au on nano carbon substrate,” RSC Advances. 2016. link Times cited: 5 Abstract: Molecular dynamics simulations have been performed to invest… read moreAbstract: Molecular dynamics simulations have been performed to investigate the coalescence of two spreading droplets on different nano carbon substrates. Simulation results show that the drop formation behavior is influenced by the surface structures of carbon substrates and geometrical shapes of drops. In the case of pillared graphene substrates, the unexpected detachment of Au drops is observed due to the dewettability. Moreover, the increase of minimum height of the bridge connecting drops exhibits power-law behavior, revealing that the bridge evolves with self-similar dynamics, which is further illustrated by the scaling profiles. Our results provide an available method to tune the coalescence of metallic liquid drops with alteration of surfaces or initial shapes, which has important implications in the industrial application such as ink-jet printing and metallurgy. read less USED (high confidence) A. Galashev, “Molecular-Dynamic Simulation of the Bombardment of a Lead Film on Graphene by Xe13 Clusters,” The Physics of Metals and Metallography. 2016. link Times cited: 4 USED (high confidence) A. Galashev, “Molecular-Dynamic Simulation of the Removal of Mercury from Graphene via Bombardment with Xenon Clusters,” The Physics of Metals and Metallography. 2016. link Times cited: 2 USED (high confidence) C. Nguyen and B. H. Kim, “Stress and surface tension analyses of water on graphene-coated copper surfaces,” International Journal of Precision Engineering and Manufacturing. 2016. link Times cited: 30 USED (high confidence) W. Jiang, Y.-H. Zeng, Q. Qin, and Q. Luo, “A novel oscillator based on heterogeneous carbon@MoS2 nanotubes,” Nano Research. 2016. link Times cited: 15 USED (high confidence) A. Galashev and V. Polukhin, “Simulation of the removal of a lead film from graphene by the irradiation of a target with a beam of xenon clusters,” Russian Journal of Physical Chemistry B. 2016. link Times cited: 2 USED (high confidence) C. Nguyen and B. H. Kim, “Stress and surface tension analyses of water on graphene-coated copper surfaces,” International Journal of Precision Engineering and Manufacturing. 2016. link Times cited: 2 USED (high confidence) A. Galashev and O. Rakhmanova, “Computer simulation of a forced drift of lithium ions through graphene membranes,” High Temperature. 2016. link Times cited: 9 USED (high confidence) G. Rajasekaran and A. Parashar, “Molecular dynamics study on the mechanical response and failure behaviour of graphene: performance enhancement via 5–7–7–5 defects,” RSC Advances. 2016. link Times cited: 22 Abstract: A one atom-thick sheet of carbon exhibits outstanding elasti… read moreAbstract: A one atom-thick sheet of carbon exhibits outstanding elastic moduli and tensile strength in its pristine form but structural defects which are inevitable in graphene due to its production techniques can alter its structural properties. These defects in graphene are introduced either during the production process or deliberately by us to tailor its properties. This article discusses the performance enhancement of graphene by introducing pentagon–heptagon–heptagon–pentagon (5–7–7–5) defects. The effect of geometrical parameters such as the nearest neighbour distance and angular orientation between 5–7–7–5 defects on the mechanical properties and failure morphology of graphene was investigated in the frame of molecular dynamics. The mechanical properties and failure morphology of graphene was predicted to be the function of geometrical parameters between 5–7–7–5 defects. It has been predicted from the current study that the brittle behaviour of graphene can be modified to ductile with well controlled distribution of 5–7–7–5 defects. Also it has been predicted that the mechanical properties of graphene can be altered by proper distribution of 5–7–7–5 defects. read less USED (high confidence) J. Huang and Q. Han, “Controllable nanoscale rotating actuator system based on carbon nanotube and graphene,” Nanotechnology. 2016. link Times cited: 11 Abstract: A controllable nanoscale rotating actuator system consisting… read moreAbstract: A controllable nanoscale rotating actuator system consisting of a double carbon nanotube and graphene driven by a temperature gradient is proposed, and its rotating dynamics performance and driving mechanism are investigated through molecular dynamics simulations. The outer tube exhibits stable pure rotation with certain orientation under temperature gradient and the steady rotational speed rises as the temperature gradient increases. It reveals that the driving torque is caused by the difference of atomic van der Waals potentials due to the temperature gradient and geometrical features of carbon nanotube. A theoretical model for driving torque is established based on lattice dynamics theory and its predicted results agree well with molecular dynamics simulations. Further discussion is taken according to the theoretical model. The work in this study would be a guide for design and application of controllable nanoscale rotating devices based on carbon nanotubes and graphene. read less USED (high confidence) A. Chogani, A. Moosavi, and M. Rahiminejad, “Numerical Simulation of Salt Water Passing Mechanism Through Nanoporous Single-Layer Graphene Membrane,” Chemical Product and Process Modeling. 2016. link Times cited: 11 Abstract: In recent years carbon nanotubes and other carbon nanostruct… read moreAbstract: In recent years carbon nanotubes and other carbon nanostructures such as graphene sheets have attracted a lot of attention due to their unique mechanical, thermal and electrical properties. These structures can be used in desalination of sea water, removal of hazardous substances from water tanks, gases separation, and so on. The nanoporous single layer graphene membranes are very efficient for desalinating water due to their very low thickness. In this method, water-flow thorough the membrane and salt rejection strongly depend on the applied pressure and size of nanopores that are created in graphene membrane. In this study, the mechanism of passing water and salt ions through nanoporous single-layer graphene membrane are simulated using classical molecular dynamics. We examined the effects of applied pressure and size of nanopores on desalination performance of NPG membrane. Unlike previous researches, we considered the flexibility of the membrane. The results show that by increasing the applied pressure and diameter of the nanopores, water-flow through membrane increases, meanwhile salt rejection decreases. read less USED (high confidence) A. Sarkar, J. Eapen, A. Raj, K. Murty, and T. Burchell, “Modeling irradiation creep of graphite using rate theory,” Journal of Nuclear Materials. 2016. link Times cited: 7 USED (high confidence) J. Xu, B. Zheng, and Y. Liu, “Solitary Wave in One-dimensional Buckyball System at Nanoscale,” Scientific Reports. 2016. link Times cited: 16 USED (high confidence) A. Galashev, “Computer simulation of the xenon-cluster bombardment of mercury on graphene,” Journal of Surface Investigation. X-ray, Synchrotron and Neutron Techniques. 2016. link Times cited: 0 USED (high confidence) S. Liu et al., “Molecular dynamics study on the nucleation of Al-Si melts on sheet substrates at the nanoscale.,” Nanoscale. 2016. link Times cited: 8 Abstract: Molecular dynamics (MD) simulations are performed to study t… read moreAbstract: Molecular dynamics (MD) simulations are performed to study the freezing process of Al-Si melts on heterogeneous Si substrates in detail. We highlight the inherent nanostructure of both the Si primary phase and the Al-Si binary phase. It is found for the first time that the primary Si phase displays a "pyramidal configuration" when the Al-Si melt congeals. Experimental measurements could also verify our simulation results. It can be found that the binary Al-Si phase turns into a "Si-Al-Si sandwich construction" during solidification, regardless of freezing on a single substrate or in the restricted space between substrates. This peculiar phenomenon results from the combined effects of the van der Waals potential well and the interatomic interaction between Al and Si. Furthermore, it is also able to control the thickness of the Si atomic shell of the "sandwich construction", resulting in the silicene-like unilaminar Si nanostructure. Our findings provide novel strategies to fabricate desired shaped nanostructures by means of nanocasting in Al-Si melts at the nanoscale. read less USED (high confidence) M. Becton and X. Wang, “Tailoring patterns of graphene wrinkles by circular torsion,” Applied Surface Science. 2016. link Times cited: 12 USED (high confidence) Z. Zhu, X. Yang, M. Huang, Q. He, G. Yang, and Z. Wang, “Mechanisms governing phonon scattering by topological defects in graphene nanoribbons,” Nanotechnology. 2016. link Times cited: 8 Abstract: Understanding phonon scattering by topological defects in gr… read moreAbstract: Understanding phonon scattering by topological defects in graphene is of particular interest for thermal management in graphene-based devices. We present a study that quantifies the roles of the different mechanisms governing defect phonon scattering by comparing the effects of ten different defect structures using molecular dynamics. Our results show that phonon scattering is mainly influenced by mass density difference, with general trends governed by the defect formation energy and typical softening behaviors in the phonon density of state. The phonon scattering cross-section is found to be far larger than that geometrically occupied by the defects. We also show that the lattice thermal conductivity can be reduced by a factor of up to ~30 in the presence of the grain boundaries formed by these defects. read less USED (high confidence) Y. Jhon, C. Kim, M. Seo, W. Cho, S. Lee, and Y. Jhon, “Tensile Characterization of Single-Walled Carbon Nanotubes with Helical Structural Defects,” Scientific Reports. 2016. link Times cited: 33 USED (high confidence) T. Panczyk, L. Konczak, J. Narkiewicz-Michałek, and G. Pastorin, “Corking and Uncorking Carbon Nanotubes by Metal Nanoparticles Bearing pH-Cleavable Hydrazone Linkers. Theoretical Analysis Based on Molecular Dynamics Simulations,” Journal of Physical Chemistry C. 2016. link Times cited: 8 Abstract: In this work we determine and discuss free-energy barriers a… read moreAbstract: In this work we determine and discuss free-energy barriers associated with the detachment of metal (gold) nanoparticles covered by an organic shell from carbon nanotubes functionalized by hydrazide segments. At neutral pH, both compounds can form hydrazone bonds which in turn lead to the chemically corked form of the nanotube. At slightly acidic pH, the hydrazone bonds undergo hydrolysis, leading to chemically unbonded nanotube and gold nanoparticles. We found that at this state the dispersion interactions between the nanotube and gold nanoparticles are still very strong and spontaneous detachment of gold nanoparticles does not occur. Therefore, the uncorked state of the nanotube cannot be realized at normal conditions. The presence of guest molecules (cisplatin) in the inner cavity of the nanotube affects the energetic balance of the system, and spontaneous uncorking can occur with some small activation barrier. However, the uncorking is in this case related to the shift of the nanoparticle from the nano... read less USED (high confidence) S. Ma, L. Sun, and K. W. Zhang, “Prediction of two planar carbon allotropes with large meshes.,” Physical chemistry chemical physics : PCCP. 2016. link Times cited: 10 Abstract: Two novel two-dimensional (2D) carbon allotropes named C(y) … read moreAbstract: Two novel two-dimensional (2D) carbon allotropes named C(y) and C(z) with large meshes are predicted based on first-principles calculations. Their formation energies are lower than that of graphdiyne, which was recently synthesized in an experiment. Molecular dynamics simulations indicate that C(y) and C(z) are stable even when the temperature is over 1000 K. The calculated Poisson's ratios of C(y) and C(z) show their anisotropic mechanical properties. The electronic structure calculations indicate that C(y) is a metal, while C(z) behaves as a semiconductor. Moreover, C(z) shows conductive anisotropy suggesting its potential in nanoelectronic devices. Meanwhile, their well-defined mesh structures are suitable for molecular sieves. read less USED (high confidence) S. Ozden et al., “Indentation Tests Reveal Geometry-Regulated Stiffening of Nanotube Junctions.,” Nano letters. 2016. link Times cited: 13 Abstract: Here we report a unique method to locally determine the mech… read moreAbstract: Here we report a unique method to locally determine the mechanical response of individual covalent junctions between carbon nanotubes (CNTs), in various configurations such as "X", "Y", and "Λ"-like. The setup is based on in situ indentation using a picoindenter integrated within a scanning electron microscope. This allows for precise mapping between junction geometry and mechanical behavior and uncovers geometry-regulated junction stiffening. Molecular dynamics simulations reveal that the dominant contribution to the nanoindentation response is due to the CNT walls stretching at the junction. Targeted synthesis of desired junction geometries can therefore provide a "structural alphabet" for construction of macroscopic CNT networks with tunable mechanical response. read less USED (high confidence) J. Wallace, D. Chen, and L. Shao, “Carbon Displacement-Induced Single Carbon Atomic Chain Formation and its Effects on Sliding of SiC Fibers in SiC/graphene/SiC Composite,” Materials Research Letters. 2016. link Times cited: 12 Abstract: Understanding radiation effects on the mechanical properties… read moreAbstract: Understanding radiation effects on the mechanical properties of SiC composites is important to their application in advanced reactor designs. By means of molecular dynamics simulations, we found that due to strong interface bonding between the graphene layers and SiC, the sliding friction of SiC fibers is largely determined by the frictional behavior between graphene layers. Upon sliding, carbon displacements between graphene layers can act as seed atoms to induce the formation of single carbon atomic chains (SCACs) by pulling carbon atoms from the neighboring graphene planes. The formation, growth, and breaking of SCACs determine the frictional response to irradiation. read less USED (high confidence) R. Shahsavari and N. Sakhavand, “Junction configuration-induced mechanisms govern elastic and inelastic deformations in hybrid carbon nanomaterials,” Carbon. 2015. link Times cited: 38 USED (high confidence) S. Kimiagar, A. Rajabpour, and F. Tavazoee, “Effect of Defects on Mechanical Properties of Graphene under Shear Loading Using Molecular Dynamic Simulation,” Physical Chemistry Research. 2015. link Times cited: 2 Abstract: Graphene sheet including single vacancy, double vacancy and … read moreAbstract: Graphene sheet including single vacancy, double vacancy and Stone-Wales with armchair and zigzag structure was simulated using molecular dynamics simulation. The effect of defects on shear’s modulus, shear strength and fracture strain was investigated. Results showed that these shear properties reduce when the degrees of all kinds of defects increase. The dangling bond in SV and DV defected graphene leads to decrease its mechanical properties especially shear strength and fracture strain where the role of weak interatomic bonds are important. The vacancies in DV defected graphene are also next to each other and slide over each other under shear deformation results to less shear strength than that of SV defected graphene. Results can be useful in tuning the mechanical properties of graphene-based materials that is a key-role parameter in designing and fabrication of nanomechanical systems. However, the maximum and minimum reduction occurs for single vacancy and Stone-Wales defects, respectively. It was also found that distinction between shear properties of zigzag and armchair structures is preserved in defected graphene. read less USED (high confidence) X. Liu, F. Wang, and H. Wu, “Anomalous twisting strength of tilt grain boundaries in armchair graphene nanoribbons.,” Physical chemistry chemical physics : PCCP. 2015. link Times cited: 15 Abstract: The twisting response of armchair graphene nanoribbons with … read moreAbstract: The twisting response of armchair graphene nanoribbons with tilt grain boundaries is theoretically and numerically investigated. It is found that the critical instability twist rate of graphene nanoribbons with grain boundaries is generally about 10% higher than that of common armchair graphene nanoribbons when the width of nanoribbons is less than 4.0 nm. Our analytical analysis indicates that the strengthening effect is resulted from the rotation of the compressed direction, deflection of grain boundaries, and the reflexing of the creased angle in nanoribbons: the rotation of the compressed direction induced by grain boundaries improves the buckling strength of nanoribbons due to the chirality-dependent buckling in graphene; the deflection of grain boundaries leads to a nonzero strain in the axle wire of nanoribbons, which eventually decreases the compressed stress; grain boundaries induce a spontaneous creased angle in nanoribbons, which is reflexed under twist loading and impedes the propagation of instability in nanoribbons. Furthermore, we found and demonstrated that grain boundaries changed the transport properties of twisted graphene nanoribbons. It is expected that our findings would improve the fundamental understanding of the strain-engineering of graphene nanoribbons used in nanodevices. read less USED (high confidence) W. Li and J. Xue, “Ion implantation of low energy Si into graphene: insight from computational studies,” RSC Advances. 2015. link Times cited: 7 Abstract: By employing both molecular dynamics (MD) simulations and ab… read moreAbstract: By employing both molecular dynamics (MD) simulations and ab initio calculations based on the density functional theory (DFT), we studied the efficiency of doping graphene with low energy Si ions implantation. Mainly two types of substitutional doping configurations resulting from Si ion implantation were found in graphene, namely perfect Si substitution at monovacancy (Si@MV), and Si interstitial defect at divacancy site (Si@DV). High efficiency for Si substitutions was obtained within a wide energy range varied between 30–150 eV. At the optimum energy of 70 eV, up to 59% of the incident Si ions would be incorporated in graphene by Si@MV. Moreover, the experimental doping efficiency should be higher than the above value of 59% because Si adatom on graphene surface can be eventually turned into a substitution atom via annihilating with a vacancy defect produced in the collision process. Such high doping efficiency makes ion implantation a powerful tool to dope graphene with Si and similar elements. Our results provide a theoretical clue for the property engineering of graphene by using ion irradiation technique, in particular for doping graphene with heavy ions. read less USED (high confidence) Y. Huang, C.-wei Song, J. Zhang, and T. Sun, “Femtosecond laser ablation of polystyrene: A molecular dynamics study,” Journal of Applied Polymer Science. 2015. link Times cited: 1 Abstract: In this work we perform molecular dynamics simulations to in… read moreAbstract: In this work we perform molecular dynamics simulations to investigate the thermodynamic mechanisms of amorphous polystyrene ablated by a femtosecond laser pulse. The utilized width and fluence of the laser pulse are 10 fs and 1012 W/cm2, respectively. Furthermore, the effect of chain length on the microscopic material removal mechanisms and related macroscopic evolutions of system quantities is studied. Simulations results indicate that the ultra-short laser pulse irradiation introduces significant instabilities into the target material because of the lattice perturbation, which leads to the relaxation of lattice destabilizations after the pulse through evaporation from the top surface and expansion within the bulk. It is found that the competition between the two mechanisms of evaporation and expansion is strongly influenced by the chain length. © 2015 Wiley Periodicals, Inc. J. Appl. Polym. Sci. 2015, 132, 42713. read less USED (high confidence) I. E. Awad and L. Ladani, “Mechanical integrity of a carbon nanotube/copper-based through-silicon via for 3D integrated circuits: a multi-scale modeling approach,” Nanotechnology. 2015. link Times cited: 10 Abstract: Carbon nanotube (CNT)/copper (Cu) composite material is prop… read moreAbstract: Carbon nanotube (CNT)/copper (Cu) composite material is proposed to replace Cu-based through-silicon vias (TSVs) in micro-electronic packages. The proposed material is believed to offer extraordinary mechanical and electrical properties and the presence of CNTs in Cu is believed to overcome issues associated with miniaturization of Cu interconnects, such as electromigration. This study introduces a multi-scale modeling of the proposed TSV in order to evaluate its mechanical integrity under mechanical and thermo-mechanical loading conditions. Molecular dynamics (MD) simulation was used to determine CNT/Cu interface adhesion properties. A cohesive zone model (CZM) was found to be most appropriate to model the interface adhesion, and CZM parameters at the nanoscale were determined using MD simulation. CZM parameters were then used in the finite element analysis in order to understand the mechanical and thermo-mechanical behavior of composite TSV at micro-scale. From the results, CNT/Cu separation does not take place prior to plastic deformation of Cu in bending, and separation does not take place when standard thermal cycling is applied. Further investigation is recommended in order to alleviate the increased plastic deformation in Cu at the CNT/Cu interface in both loading conditions. read less USED (high confidence) Y. Li, S. Liu, D. Datta, and Z. Li, “Surface hydrogenation regulated wrinkling and torque capability of hydrogenated graphene annulus under circular shearing,” Scientific Reports. 2015. link Times cited: 13 USED (high confidence) R. Eason and T. Sewell, “Molecular Dynamics Simulations of the Collapse of a Cylindrical Pore in the Energetic Material α-RDX,” Journal of Dynamic Behavior of Materials. 2015. link Times cited: 51 USED (high confidence) F. Valencia, J. Mella, R. González, M. Kiwi, and E. Bringa, “Confinement effects in irradiation of nanocrystalline diamond,” Carbon. 2015. link Times cited: 17 USED (high confidence) K. Liu et al., “Self‐Passivation of Defects: Effects of High‐Energy Particle Irradiation on the Elastic Modulus of Multilayer Graphene,” Advanced Materials. 2015. link Times cited: 24 Abstract: The elastic modulus of multilayer graphene is found to be mo… read moreAbstract: The elastic modulus of multilayer graphene is found to be more robust to damage created by high-energy α-particle irradiation as compared to monolayer graphene. Theoretical analysis indicates that irradiation of multilayer graphene generates interlayer links that potentially increase the stiffness of the multilayer by passivating local defects. read less USED (high confidence) S. Verkhoturov, S. Geng, B. Czerwinski, A. Young, A. Delcorte, and E. Schweikert, “Single impacts of keV fullerene ions on free standing graphene: Emission of ions and electrons from confined volume.,” The Journal of chemical physics. 2015. link Times cited: 16 Abstract: We present the first data from individual C60 impacting one … read moreAbstract: We present the first data from individual C60 impacting one to four layer graphene at 25 and 50 keV. Negative secondary ions and electrons emitted in transmission were recorded separately from each impact. The yields for C(n)(-) clusters are above 10% for n ≤ 4, they oscillate with electron affinities and decrease exponentially with n. The result can be explained with the aid of MD simulation as a post-collision process where sufficient vibrational energy is accumulated around the rim of the impact hole for sputtering of carbon clusters. The ionization probability can be estimated by comparing experimental yields of C(n)(-) with those of C(n)(0) from MD simulation, where it increases exponentially with n. The ionization probability can be approximated with ejecta from a thermally excited (3700 K) rim damped by cluster fragmentation and electron detachment. The experimental electron probability distributions are Poisson-like. On average, three electrons of thermal energies are emitted per impact. The thermal excitation model invoked for C(n)(-) emission can also explain the emission of electrons. The interaction of C60 with graphene is fundamentally different from impacts on 3D targets. A key characteristic is the high degree of ionization of the ejecta. read less USED (high confidence) S. Wang, B.-cheng Yang, J. Yuan, Y. Si, and H. Chen, “Large-Scale Molecular Simulations on the Mechanical Response and Failure Behavior of a defective Graphene: Cases of 5–8–5 Defects,” Scientific Reports. 2015. link Times cited: 67 USED (high confidence) L. Xiang, J. Wu, S. Ma, F. Wang, and K. Zhang, “Nanoindentation Models of Monolayer Graphene and Graphyne under Point Load Pattern Studied by Molecular Dynamics,” Chinese Physics Letters. 2015. link Times cited: 8 Abstract: Molecular dynamics simulations are performed to study the na… read moreAbstract: Molecular dynamics simulations are performed to study the nanoindentation models of monolayer suspended graphene and graphyne. Fullerenes are selected as indenters. Our results show that Young's modulus of monolayer-thick graphyne is almost half of that of graphene, which is estimated to be 0.50 TPa. The mechanical properties of graphene and graphyne are different in the presence of strain. A pre-tension has an important effect on the mechanical properties of a membrane. Both the pre-tension and Young's modulus plots demonstrate index behavior. The toughness of graphyne is stronger than that of graphene due to Young's modulus magnitude. Young's moduli of graphene and graphyne are almost independent of the size ratio of indenter to membrane. read less USED (high confidence) H. Yin and K. Cai, “Unwinding of a carbon nanoscroll due to high speed rotation,” AIP Advances. 2015. link Times cited: 4 Abstract: A carbon nanoscroll (CNS) can be formed easily by rolling a … read moreAbstract: A carbon nanoscroll (CNS) can be formed easily by rolling a graphene sheet around a carbon nanotube (CNT) [Zhang and Li, 2010, APL, 97, 081909]. When the CNS is driven by the rotary CNT to rotate at a high speed, the attractive interaction within the CNS or between the CNS and CNT is crippled by the centrifugal force on the CNS. The unwinding of CNS is triggered when the kinetic energy increment approaches to the variation of interaction energy of the system during CNS formation. Numerical experiments also indicate that the unwinding of CNS happens earlier when the CNT has a higher rotational speed or the system is at a higher temperature. read less USED (high confidence) J. Han, N. Pugno, and S. Ryu, “Nanoindentation cannot accurately predict the tensile strength of graphene or other 2D materials.,” Nanoscale. 2015. link Times cited: 41 Abstract: Due to the difficulty of performing uniaxial tensile testing… read moreAbstract: Due to the difficulty of performing uniaxial tensile testing, the strengths of graphene and its grain boundaries have been measured in experiments by nanoindentation testing. From a series of molecular dynamics simulations, we find that the strength measured in uniaxial simulation and the strength estimated from the nanoindentation fracture force can differ significantly. Fracture in tensile loading occurs simultaneously with the onset of crack nucleation near 5-7 defects, while the graphene sheets often sustain the indentation loads after the crack initiation because the sharply concentrated stress near the tip does not give rise to enough driving force for further crack propagation. Due to the concentrated stress, strength estimation is sensitive to the indenter tip position along the grain boundaries. Also, it approaches the strength of pristine graphene if the tip is located slightly away from the grain boundary line. Our findings reveal the limitations of nanoindentation testing in quantifying the strength of graphene, and show that the loading-mode-specific failure mechanism must be taken into account in designing reliable devices from graphene and other technologically important 2D materials. read less USED (high confidence) S. V. Erohin and P. Sorokin, “Elastic properties of nanopolycrystalline diamond: The nature of ultrahigh stiffness,” Applied Physics Letters. 2015. link Times cited: 12 Abstract: Recent experimental reports on the production of nanopolycry… read moreAbstract: Recent experimental reports on the production of nanopolycrystalline diamond with outstanding mechanical stiffness highlight the importance of theoretical investigation of this unusual effect. Here, we provide the comprehensive theoretical investigation of such material. We traced the evolution of the nanopolycrystalline diamond stiffness characterized by bulk modulus with the grain size increasing up to 10 nm and found samples with bulk modulus higher than that of diamond. We studied nature of such specific behavior and proposed a mechanism of stiffening in nanopolycrystalline diamond which could explain reference experimental results. read less USED (high confidence) T. Zhang, L. Zhu, and G. Chen, “Suppressed thermal conductivity of ultrathin carbon nanotube(2, 1) upon hydrogenation.,” The Journal of chemical physics. 2015. link Times cited: 4 Abstract: Non-equilibrium molecular dynamic simulations reveal that th… read moreAbstract: Non-equilibrium molecular dynamic simulations reveal that the thermal conductivity of ultrathin carbon nanotube (CNT)(2, 1) is significantly suppressed upon hydrogenation. The addition of hydrogen atoms to two-coordinated carbon atoms lowers the participation ratios of phonon modes, thus indicating that the spatial distribution of phonons becomes localized. Furthermore, the phonon lifetimes are remarkably shortened in hydrogenated CNT(2, 1) (HCNT(2, 1)) compared with those of bare CNT(2, 1). The lowered participation ratios and lifetimes of phonon modes are responsible for the significant reduction of thermal conductivity in HCNT(2, 1). Our study is also helpful for understanding the weakened thermal transport abilities in carbon polymers, namely, the cross links formed between individual polymer chains will hinder the thermal conduction along polymers, even though the single straight carbon polymer has a high and divergent thermal conductivity. read less USED (high confidence) A. Delcorte and M. Debongnie, “Macromolecular Sample Sputtering by Large Ar and CH4 Clusters: Elucidating Chain Size and Projectile Effects with Molecular Dynamics,” Journal of Physical Chemistry C. 2015. link Times cited: 23 Abstract: This article reports the latest developments of our theoreti… read moreAbstract: This article reports the latest developments of our theoretical studies of gas cluster bombardment of model macromolecular samples using molecular dynamics simulations. Here, we perform a detailed comparison of the effects of the sample molecular weight, the Ar cluster incidence angle (45° vs 0°), and the cluster nature (CH4 vs Ar) on the soft sputtering of polymeric samples. The results of Ar cluster-induced sputtering and fragmentation at 45° incidence for molecular targets with three different molecular weights (282, 1388, and 14002 amu) indicate a pronounced influence of that parameter beyond 1000 amu, which is explained by the extra energy needed to form fragments from longer chains and to overcome mechanical entanglement. An excellent agreement is found between the computed statistics of sputtering and the available experimental data for similar molecular weights. The variance of the sputtering and polymer fragmentation results with changing beam parameters is explained via the microscopic analysis ... read less USED (high confidence) A. Galashev, “Mercury droplet formation on a graphene surface. Computer experiment,” Colloid Journal. 2015. link Times cited: 5 USED (high confidence) Q. Xiong and X. Tian, “Atomistic simulations of interfacial mechanical characteristics of carbon nanotube/silicon nanocomposites,” Molecular Simulation. 2015. link Times cited: 13 Abstract: The interfacial mechanical properties of carbon nanotube (CN… read moreAbstract: The interfacial mechanical properties of carbon nanotube (CNT)-reinforced silicon nanocomposites are investigated by using molecular dynamics simulation method. The hybrid potential that includes Tersoff_2 potential for Si–Si in the silicon matrix, AIREBO potential for C–C in the CNTs and the Lennard-Jones (LJ) potential for Si–C in the interface is used in the nanocomposite system. The effects of such parameters as the CNT chirality, the CNT diameter and the CNT embedded length, the defects (Vacancy defects, Stone–Wales defects), the size of model, the temperature, the bonding strength and the cut-off distance of the interfacial LJ potential of nanocomposites on the pull force and the average interfacial shear strength (ISS) are investigated and discussed. The results show that the toughness and the maximum tensile strength have been increased significantly by adding the CNTs into the Si matrix. Also by increasing the LJ bonding strength and the cut-off distance of the LJ potential, the pull force and the ISS are increased significantly. The CNT chirality, the CNT diameter and the CNT embedded length have a great influence on the pull force and the ISS, while the effects of temperature, the defects and the size of model are very slight. read less USED (high confidence) B. Wen, C. Sun, and B. Bai, “Inhibition effect of a non-permeating component on gas permeability of nanoporous graphene membranes.,” Physical chemistry chemical physics : PCCP. 2015. link Times cited: 35 Abstract: We identify the inhibition effect of a non-permeating gas co… read moreAbstract: We identify the inhibition effect of a non-permeating gas component on gases permeating through the nanoporous graphene membranes and reveal its mechanisms from molecular dynamics insights. The membrane separation process involves the gas mixtures of CH4/H2 and CH4/N2 with different partial pressures of the non-permeating gas component (CH4). The results show that the permeance of the H2 and N2 molecules decreases sharply in the presence of the CH4 molecules. The permeance of the N2 molecules can be reduced to as much as 64.5%. The adsorption of the CH4 molecules on the graphene surface weakens the surface adsorption of the H2 and N2 molecules due to a competitive mechanism, accordingly reducing the permeability of the H2 and N2 molecules. For the N2 molecules with stronger adsorption ability, the reduction of the permeance is greater. On the other hand, the CH4 molecules near the nanopore have a blocking effect, which further inhibits the permeation of the H2 and N2 molecules. In addition, we predict the selectivity of the nanopore by using density functional theory calculations. This work can provide valuable guidance for the application of nanoporous graphene membranes in the separation of the gas mixtures consisting of permeating and non-permeating components with different adsorption abilities. read less USED (high confidence) H. Ren, L. Zhang, X.-Y. Li, Y. Li, W. Wu, and H. Li, “Interfacial structure and wetting properties of water droplets on graphene under a static electric field.,” Physical chemistry chemical physics : PCCP. 2015. link Times cited: 46 Abstract: The behavior of water droplets located on graphene in the pr… read moreAbstract: The behavior of water droplets located on graphene in the presence of various external electric fields (E-fields) is investigated using classical molecular dynamics (MD) simulations. We explore the effect of E-field on mass density distribution, water polarization as well as hydrogen bonds (H-bonds) to gain insight into the wetting properties of water droplets on graphene and their interfacial structure under uniform E-fields. The MD simulation results reveal that the equilibrium water droplets present a hemispherical, a conical and an ordered cylindrical shape with the increase of external E-field intensity. Accompanied by the shape variation of water droplets, the dipole orientation of water molecules experiences a remarkable change from a disordered state to an ordered state because of the polarization of water molecules induced by static E-field. The distinct two peaks in mass density and H-bond distribution profiles demonstrate that water has a layering structure in the interfacial region, which sensitively depends on the strong E-field (>0.8 V nm(-1)). In addition, when the external E-field is parallel to the substrate, the E-field would make the contact angle of the water droplets become small and increase its wettability. Our findings provide the possibility to control the structure and wetting properties of water on graphene by tuning the direction and intensity of external E-field which is of importance for relevant industrial processes on the solid surface. read less USED (high confidence) A. Galashev and A. A. Galasheva, “Mercury removal from graphene by bombardment with xenon clusters: Computer simulation,” High Energy Chemistry. 2015. link Times cited: 1 USED (high confidence) C. Li, G. Li, and H. Zhao, “Thermal conductivity variation of graphene with patterned double-side hydrogen doping,” Journal of Applied Physics. 2015. link Times cited: 16 Abstract: Using non-equilibrium molecular dynamics simulations, we inv… read moreAbstract: Using non-equilibrium molecular dynamics simulations, we investigate the thermal conductivity variation of graphene with different hydrogen doping coverage and doping orientation. It shows that the thermal conductivity of graphene decreases with increasing hydrogen doping coverage. The decreasing rate, however, depends on the doping orientation. Based on the kinetic theory of lattice thermal transport, we study the effect of doping coverage and orientation on the phonon density of states, phonon dispersion relation, phonon relaxation time, and the specific heat. While hydrogen doping has little effect on the specific heat, it decreases the phonon group velocity and increases phonon-phonon scattering in graphene. The phonon group velocity reduction is only due to the increment of doping coverage and is independent of doping orientation. A larger angle between the doping stripe orientation and the heat flux direction leads to smaller relaxation times, i.e., stronger phonon-phonon scattering, resulting in a ... read less USED (high confidence) H. Han et al., “Functionalization mediates heat transport in graphene nanoflakes,” Nature Communications. 2015. link Times cited: 113 USED (high confidence) T. Al-Mulla, Z. Qin, and M. Buehler, “Crumpling deformation regimes of monolayer graphene on substrate: a molecular mechanics study,” Journal of Physics: Condensed Matter. 2015. link Times cited: 22 Abstract: Experiments and simulations demonstrating reversible and rep… read moreAbstract: Experiments and simulations demonstrating reversible and repeatable crumpling of graphene warrant a detailed understanding of the underlying mechanisms of graphene crumple formation, especially for design of tailored nanostructures. To systematically study the formation of crumples in graphene, we use a simple molecular dynamics model, and perform a series of simulations to characterize the finite number of deformation regimes of graphene on substrate after compression. We formulate a quantitative measure of predicting these deformations based on observed results of the simulations and distinguish graphene crumpling considered in this study from others. In our study, graphene is placed on a model substrate while controlling and varying the interfacial energy between graphene and substrate and the substrate roughness through a set of particles embedded in the substrate. We find that a critical value of interfacial adhesion energy marks a transition point that separates two deformation regimes of graphene on substrate under uniaxial compression. The interface between graphene and substrate plays a major role in the formation of crumples, and we show that the choice of substrate can help in designing desired topologies in graphene. read less USED (high confidence) C. Zhang and S. Chen, “Defect- and dopant-controlled carbon nanotubes fabricated by self-assembly of graphene nanoribbons,” Nano Research. 2015. link Times cited: 7 USED (high confidence) M. Jafary-Zadeh and Y.-W. Zhang, “Molecular mobility on graphene nanoroads,” Scientific Reports. 2015. link Times cited: 8 USED (high confidence) K. Cai, X. Zhang, J. Shi, and Q. Qin, “Temperature effects on a motion transmission device made from carbon nanotubes: a molecular dynamics study,” RSC Advances. 2015. link Times cited: 7 Abstract: A motion transmission system made from coaxial carbon nanotu… read moreAbstract: A motion transmission system made from coaxial carbon nanotubes (CNTs) is introduced. In the system, the motor is built from a single-walled carbon nanotube (SWCNT) and the converter is made from triple-walled carbon nanotubes (TWCNTs). The outer shell acts as a stator with two fixed tube ends. The inner tube (rotor 1) and the middle tube (rotor 2) can move freely in the stator. When the axial gaps between the motor and the TWCNTs are small enough and the motor has a relatively high rotational speed, the two rotors have either stable rotation or oscillation, which can be considered as output signals. To investigate the effects of such factors as the length of rotor 2, the rotational speed of the motor, and the environmental temperature on the dynamic response of the two rotors, numerical simulations using molecular dynamics (MD) are presented on a device model having a (5, 5) motor and a (5, 5)/(10, 10)/(1, 15) converter. Numerical results show that the two inner tubes can act as both rotor(s) and oscillator, simultaneously if the middle tube is longer than the inner tube. In particular, we find a new phenomenon, mode conversion of the rotation of rotor 1 by changing the environmental temperature. Briefly, rotor 1 rotates synchronously with the high-speed motor at a higher temperature or with rotor 2 at a lower temperature. The effect of radii difference among the three tubes in the bearing are also discussed by replacing the middle tube (10, 10) with different zigzag tubes. read less USED (high confidence) J. Shi, Y. Dong, T. Fisher, and X. Ruan, “Thermal transport across carbon nanotube-graphene covalent and van der Waals junctions,” Journal of Applied Physics. 2015. link Times cited: 47 Abstract: Carbon nanotubes and graphene are promising materials for th… read moreAbstract: Carbon nanotubes and graphene are promising materials for thermal management applications due to their high thermal conductivities. However, their thermal properties are anisotropic, and the radial or cross-plane direction thermal conductivity is low. A 3D Carbon nanotube (CNT)-graphene structure has previously been proposed to address this limitation, and direct molecular dynamics simulations have been used to predict the associated thermal conductivity. In this work, by recognizing that thermal resistance primarily comes from CNT-graphene junctions, a simple network model of thermal transport in pillared graphene structure is developed. Using non-equilibrium molecular dynamics, the resistance across an individual CNT-graphene junction with sp2 covalent bonds is found to be around 6×10−11 m2K/W, which is significantly lower than typical values reported for planar interfaces between dissimilar materials. In contrast, the resistance across a van der Waals junction is about 4×10−8 m2K/W. Interestingly, when... read less USED (high confidence) J. Chen, Y. Gao, C. Wang, R.-liang Zhang, H. Zhao, and H. Fang, “Impeded Mass Transportation Due to Defects in Thermally Driven Nanotube Nanomotor,” Journal of Physical Chemistry C. 2015. link Times cited: 30 Abstract: A thermally driven nanotube nanomotor provides linear mass t… read moreAbstract: A thermally driven nanotube nanomotor provides linear mass transportation controlled by a temperature gradient. However, the underlying mechanism is still unclear, as the mass transportation velocity in experiment is much lower than that resulting from simulations. Considering that defects are common in fabricated nanotubes, we use molecular dynamics simulations to show that the mass transportation would be considerably impeded by defects. The outer tube of a double-walled carbon nanotube transports along the coaxial inner tube subject to a temperature gradient. While encountering the defects in the inner tube, the outer tube might be bounced back or trapped at some specific sites due to the potential barriers or wells induced by the defects. The stagnation phenomenon provides a probable picture to understand the low transportation velocity at the microscopic level. We also show that a similar stagnation phenomenon holds in mass transportation of a fullerene encapsulated in a defective carbon nanotube. Ou... read less USED (high confidence) Z. Zhang, Y. Xie, Q. Peng, and Y. Chen, “Geometry, stability and thermal transport of hydrogenated graphene nanoquilts,” Solid State Communications. 2015. link Times cited: 7 USED (high confidence) J. Horne, N. Lavrik, H. Terrones, and M. Fuentes-Cabrera, “Extrapolating Dynamic Leidenfrost Principles to Metallic Nanodroplets on Asymmetrically Textured Surfaces,” Scientific Reports. 2015. link Times cited: 5 USED (high confidence) H. Yin, K. Cai, N. Wei, Q. Qin, and J. Shi, “Study on the dynamics responses of a transmission system made from carbon nanotubes,” Journal of Applied Physics. 2015. link Times cited: 21 Abstract: A rotational transmission system from coaxial carbon nanotub… read moreAbstract: A rotational transmission system from coaxial carbon nanotubes (CNTs) is investigated using a computational molecular dynamics approach. The system consists of a motor from a single-walled carbon nanotube and a bearing from a double-walled carbon nanotube. The motor has a high fixed rotational frequency and the two ends of the outer tube in the bearing are fixed. The inner tube in the bearing works as a rotor. Because of the interlayer friction in the bearing, configurations of the joint between the adjacent ends of motor and rotor have significant effects on rotational transmission properties. Four factors are considered in simulation, i.e., the bonding types of atoms (sp1 and sp2) on the ends of motor and rotor, the difference between motor and rotor radii, the rotational speed of motor, and the environmental temperature. It is found that the synchronous transmission happens if the sp1 atoms on the jointed ends of motor and rotor are bonded each other and become new sp2 atoms. Therefore, the lower diffe... read less USED (high confidence) D. Kvashnin and P. Sorokin, “Effect of Ultrahigh Stiffness of Defective Graphene from Atomistic Point of View.,” The journal of physical chemistry letters. 2015. link Times cited: 29 Abstract: Well-known effects of mechanical stiffness degradation under… read moreAbstract: Well-known effects of mechanical stiffness degradation under the influence of point defects in macroscopic solids can be controversially reversed in the case of low-dimensional materials. Using atomistic simulation, we showed here that a single-layered graphene film can be sufficiently stiffened by monovacancy defects at a tiny concentration. Our results correspond well with recent experimental data and suggest that the effect of mechanical stiffness augmentation is mainly originated from specific bonds distribution in the surrounded monovacancy defects regions. We showed that such unusual mechanical response is the feature of presence of specifically monovacancies, whereas other types of point defects such as divacancy, 555-777 and Stone-Wales defects, lead to the ordinary degradation of the graphene mechanical stiffness. read less USED (high confidence) Z. Ye and A. Martini, “Atomic friction at exposed and buried graphite step edges: Experiments and simulations,” Applied Physics Letters. 2015. link Times cited: 38 Abstract: The surfaces of layered materials such as graphite exhibit s… read moreAbstract: The surfaces of layered materials such as graphite exhibit step edges that affect friction. Step edges can be exposed, where the step occurs at the outmost layer, or buried, where the step is underneath another layer of material. Here, we study friction at exposed and buried step edges on graphite using an atomic force microscope (AFM) and complementary molecular dynamics simulations of the AFM tip apex. Exposed and buried steps exhibit distinct friction behavior, and the friction on either step is affected by the direction of sliding, i.e., moving up or down the step, and the bluntness of the tip. These trends are analyzing in terms of the trajectory of the AFM tip as it moves over the step, which is a convolution of the topography of the surface and the tip shape. read less USED (high confidence) L. Zhang, W. Wu, H. Ren, J. Dong, Y. Liu, and H. Li, “Structural evolution of a Si melt in nanoscale confined space,” RSC Advances. 2015. link Times cited: 2 Abstract: Molecular dynamics (MD) simulations are performed to systema… read moreAbstract: Molecular dynamics (MD) simulations are performed to systematically study the structural evolution of a Si melt confined in nanoscale space. The freezing Si structure at 300 K is stratification which is composed of a stable crystalline shell and a metastable glassy core. Due to the spatial restriction effect, the confined structure consists of higher-coordinated clusters compared to the bulk Si. It is revealed that the statistical average of the ordered shell and the disordered core gives rise to the split of the second peak of the pair distribution function curves of the Si melt. Moreover, increasing the cavity size is detrimental to the stability of the layered configuration of the confined melt and increasing the cooling rate mainly influences the arrangement of Si atoms adjacent to the SWCNT wall. Interestingly, we also find that the cylindric cavity is more beneficial than the square one in inducing the formation of long-range crystalline order in nanoscale space. read less USED (high confidence) Y. Zheng, H. He, and H. Ye, “Radial stability and configuration transition of carbon nanotubes regulated by enclosed cores,” AIP Advances. 2015. link Times cited: 1 Abstract: The radial stability and configuration transition of carbon … read moreAbstract: The radial stability and configuration transition of carbon nanotubes (CNTs) with enclosed cores have been studied in this paper by using atomistic simulations. We found that an abnormal transition of CNTs from open to collapse can be regulated by enclosing deformable and rigid cores. The energy barrier for the configuration transition can be reduced by nearly one order of magnitude due to the presence of these cores, i.e., from ∼0.3 eV/A to ∼0.03 eV/A. These findings may provide guidance for the design of controllable CNT-based carrier systems for the delivery of drug, gene and fluid. read less USED (high confidence) Y. Wang and Y. Zhang, “Superior thermal conductivity of carbon nanoscroll based thermal interface materials,” 2015 IEEE 65th Electronic Components and Technology Conference (ECTC). 2015. link Times cited: 2 Abstract: As the electronic industry moves toward higher power consump… read moreAbstract: As the electronic industry moves toward higher power consumption, integrated functions and minimized geometry, one of the important challenges is the dramatically increasing power density. Thus, efficient thermal management has become a critical requirement for the design of modern electronic packages. A promising approach for this challenge is to find a high performance thermal interface materials (TIMs) made of a material with extremely high thermal conductivity. In this work, an innovative carbon-based nanomaterial, carbon nanoscroll (CNS) will be presented to yield extremely high thermal conductivity and have great potential as the component of TIMs in electronic packages. A CNS can be regarded as a monolayer graphene rolling up in a spiral form with a structure similar to a multi-walled carbon nanotube (CNT). Unlike the closed CNTs, CNS is topologically open-ended, like a Swiss roll. Using molecular dynamics (MD) simulations, the thermal conductivity of CNSs is investigated to be comparable to graphene, i.e. 3000- 5000 Wm-1K-1. Various factors that impact the thermal transport behavior of CNSs are investigated extensively. The MD simulation results show that the thermal conductivity of CNS is sensitive to the number of CNS walls, temperature, defects and functionalization. When the number of walls increases from 1 to 3, the thermal conductivity of CNSs is reduced by ~8.9%. With environmental temperature rising from 300 K to 400K, the thermal conductivity of CNSs decreases by ~16.5%. When the CNSs have single vacancy defects or functionalized hydrogen, their thermal conductivity decreases gradually with the higher densities of defects or functionalization. The results reveal that the vertical aligned CNSs can be superior to vertical aligned CNTs in serving as the thermal interface materials in electronic packages, due to their higher thermal conductivity. CNSs can also be used as superior thermally conductive fillers in polymeric TIMs. Using effective medium theory, the thermal conductivity of polymeric TIMs composited of epoxy resin matrix and CNS fillers is calculated. It is found that polymeric TIMs with epoxy resin matrix and 10% volume fraction of CNS fillers yield an effective thermal conductivity of ~79 Wm-1K-1, which is one magnitude higher than the commonly used TIMs in current electronic packaging industry. The present work reveals new insights about the extremely high thermal conductivity of CNS and its great potential in improving the thermal management of electronic packages. read less USED (high confidence) X. Hu, P. Egberts, Y. Dong, and A. Martini, “Molecular dynamics simulation of amplitude modulation atomic force microscopy,” Nanotechnology. 2015. link Times cited: 16 Abstract: Molecular dynamics (MD) simulations were used to model ampli… read moreAbstract: Molecular dynamics (MD) simulations were used to model amplitude modulation atomic force microscopy (AM-AFM). In this novel simulation, the model AFM tip responds to both tip–substrate interactions and to a sinusoidal excitation signal. The amplitude and phase shift of the tip oscillation observed in the simulation and their variation with tip–sample distance were found to be consistent with previously reported trends from experiments and theory. These simulation results were also fit to an expression enabling estimation of the energy dissipation, which was found to be smaller than that in a corresponding experiment. The difference was analyzed in terms of the effects of tip size and substrate thickness. Development of this model is the first step toward using MD to gain insight into the atomic-scale phenomena that occur during an AM-AFM measurement. read less USED (high confidence) J. Huang and C. Wong, “Effect of temperature and thickness of graphene on the hydrogen storage properties,” Sensing Technologies + Applications. 2015. link Times cited: 1 Abstract: Hydrogen, of which the application is limited due to the dif… read moreAbstract: Hydrogen, of which the application is limited due to the difficulties in finding the ideal storage material, has been considered alternative for petroleum as the main energy source. With its large surface area and other extraordinary physical properties, graphene has been the focus of many researchers as the promising candidate for hydrogen storage and transportation. In this work, the hydrogen storage characteristics of graphene have been investigated by MD simulations. We found that, under the temperature of 70 K and the pressure of 1 MPa, the hydrogen uptake percentage can be as high as 54%. And the majority of the hydrogen atoms are absorbed during the initial 100 – 200 ps of the simulation. Moreover, the hydrogen storage properties of graphene with different environment temperatures have been studied. We found that with increasing temperature, the hydrogen uptake percentage towards the end of the simulation decreases. Furthermore, the number of layers of the graphene sheet also exerts influence of the hydrogen absorption capability of the sample. We conclude that the more graphene sheets are being used, the less hydrogen atoms are being absorbed by the sample. Our work provides insight into optimizing the environmental temperature and thickness of the graphene sheet when designing novel energy storage devices, especially hydrogen storage devices. read less USED (high confidence) M. Becton, X. Zeng, and X. Wang, “Computational study on the effects of annealing on the mechanical properties of polycrystalline graphene,” Carbon. 2015. link Times cited: 21 USED (high confidence) W. Li, X. Wang, X. Zhang, S. Zhao, H. Duan, and J. Xue, “Mechanism of the Defect Formation in Supported Graphene by Energetic Heavy Ion Irradiation: the Substrate Effect,” Scientific Reports. 2015. link Times cited: 72 USED (high confidence) A. Sgouros, G. Kalosakas, M. Sigalas, and K. Papagelis, “Exotic carbon nanostructures obtained through controllable defect engineering,” RSC Advances. 2015. link Times cited: 8 Abstract: We numerically demonstrate the spontaneous formation of vari… read moreAbstract: We numerically demonstrate the spontaneous formation of various 3D carbon nanostructures, like multi-tube carbon nanotubes, nanopyramids, nanocubes, artificially rippled graphene, and other exotic nanomaterials, starting from graphene nanoribbons and inducing controllably engineered defects consisting of carbon adatoms or inverse Stone–Wales defects. The evolution of the initial defected planar structures towards the final 3D nanoarchitectures is obtained through molecular dynamics simulations, using different force fields to ensure the reproducibility of the derived results. The presented carbon nanostructures of different shapes, sizes, and morphologies, can be used in applications ranging from storage of hydrogen or other molecules, enhanced chemical reactions or catalysis in confined compartments, to drug delivery nanodevices and biosensors. read less USED (high confidence) L. Xu, X. Zhang, and Y. Zheng, “Local strain effect on the thermal transport of graphene nanoribbons: a molecular dynamics investigation.,” Physical chemistry chemical physics : PCCP. 2015. link Times cited: 15 Abstract: Strain engineering of the thermal conductivity of graphene i… read moreAbstract: Strain engineering of the thermal conductivity of graphene is highly desirable for various nanoscale thermal devices. Previous investigations have been focused mainly on the uniform strain applied uniaxially or biaxially. In this work we investigated, by non-equilibrium molecular dynamics simulations, the thermal transport behavior of graphene nanoribbons under local, nonuniform strain. A capped carbon nanotube (CNT) is used as a representative tip to indent the graphene, which creates a local stress field similar to those induced by nanoindentation or molecular adsorption. The relationship among structural deformations, phonon transport, and stress field was analyzed, and the effects of indentation depth and tip-surface interaction strength were discussed. More than 50% reduction of thermal conductance can be observed for a 20 nm × 5 nm graphene nanoribbon upon indentation. Our study revealed that the thermal transport of graphene responds flexibly and sensitively to the local strain, which can be exploited for new functional nanodevices across various disciplines such as position sensing or molecular sensing. Thermal sensors based on graphene can then be constructed. read less USED (high confidence) F. Haibiao, L. Deng, X. Yuan, J. Guo, X. Li, and P. Yang, “Thermal conductivity and thermal rectification in H-terminated graphene nanoribbons,” RSC Advances. 2015. link Times cited: 9 Abstract: The purpose of this article is to provide a systematic evalu… read moreAbstract: The purpose of this article is to provide a systematic evaluation to examine characteristics of the thermal conductivity and thermal rectification of H-terminated graphene nanoribbons (HGNRs) with Lpristine/LH-terminated = 1. The results show that HGNR thermal conductivities increase in both directions across the entire temperature range tested. Simultaneously, thermal rectification of HGNRs at various temperatures is detected. We found that with increasing temperature the thermal rectification has a gradual decreasing tendency. Furthermore, the overlap of power spectra was calculated to elucidate the underlying mechanism of thermal rectification. This work indicates a possible route to achieve thermal rectification for 2D materials by hydrogenation engineering. read less USED (high confidence) H. Ren, X.-Y. Li, H. Li, L. Zhang, and W. Wu, “Coalescence of water films on carbon-based substrates: the role of the interfacial properties and anisotropic surface topography.,” Physical chemistry chemical physics : PCCP. 2015. link Times cited: 7 Abstract: Molecular dynamics (MD) simulations are carried out to study… read moreAbstract: Molecular dynamics (MD) simulations are carried out to study the coalescence of identical adjacent and nonadjacent water films on graphene (G), vertically or horizontally stacked carbon nanotube arrays (VCNTA and HCNTA respectively). We highlight the key importance of carbon-based substrates in the growth of the liquid bridge connecting the two water films. This simulation provides reliable evidence to confirm a linear increase of the liquid bridge height, which is sensitive to the surface properties and the geometric structure. In the case of nonadjacent water films, the meniscus liquid bridge occurs solely on the VCNTA, which is attributed to the spreading of water films driven by the capillary force. Our results provide an available method to tune the coalescence of adjacent or nonadjacent films with alteration of topographically patterned surfaces, which has important implications in the design of condensation, ink-jet printing and drop manipulation on a substrate. read less USED (high confidence) R. Delaunay et al., “Molecular Growth Inside of Polycyclic Aromatic Hydrocarbon Clusters Induced by Ion Collisions.,” The journal of physical chemistry letters. 2015. link Times cited: 56 Abstract: The present work combines experimental and theoretical studi… read moreAbstract: The present work combines experimental and theoretical studies of the collision between keV ion projectiles and clusters of pyrene, one of the simplest polycyclic aromatic hydrocarbons (PAHs). Intracluster growth processes induced by ion collisions lead to the formation of a wide range of new molecules with masses larger than that of the pyrene molecule. The efficiency of these processes is found to strongly depend on the mass and velocity of the incoming projectile. Classical molecular dynamics simulations of the entire collision process-from the ion impact (nuclear scattering) to the formation of new molecular species-reproduce the essential features of the measured molecular growth process and also yield estimates of the related absolute cross sections. More elaborate density functional tight binding calculations yield the same growth products as the classical simulations. The present results could be relevant to understand the physical chemistry of the PAH-rich upper atmosphere of Saturn's moon Titan. read less USED (high confidence) C. Tang et al., “Flexible all-carbon photovoltaics with improved thermal stability,” Journal of Solid State Chemistry. 2015. link Times cited: 3 USED (high confidence) X. Long et al., “Anisotropic Shock Response of Stone–Wales Defects in Graphene,” Journal of Physical Chemistry C. 2015. link Times cited: 16 Abstract: Shock response of a basic defect type in graphene, the Stone… read moreAbstract: Shock response of a basic defect type in graphene, the Stone–Wales defect (SWD), is investigated with molecular dynamics simulations. Shock compression is applied to embedded SWDs along the armchair and zigzag directions. Upon shock loading, C–C bonds tend to rotate to an orientation perpendicular to the shock direction. SWD’s shock response shows pronounced anisotropy because of the structural anisotropies in both graphene and SWD with respect to the loading direction, and overall SWD shows stronger resistance to deformation for the armchair-direction loading. For the zigzag-direction loading, slip nucleates in SWD via formation of two pentagons by compressing two meta- or other-position atoms together during a rotation of central C–C bond and grows by means of alternating formation of two pentagons and a twisted hexagon. For the armchair-direction loading, healing, generation, and pentagon–heptagon pair separation of SWD occur via a 90° rotation of C–C bond, whereas at high shock strengths, slip may nuc... read less USED (high confidence) K. Cai, J.-zhou Yu, H. Yin, and Q.-H. Qin, “Sudden stoppage of rotor in a thermally driven rotary motor made from double-walled carbon nanotubes,” Nanotechnology. 2015. link Times cited: 19 Abstract: In a thermally driven rotary motor made from double-walled c… read moreAbstract: In a thermally driven rotary motor made from double-walled carbon nanotubes, the rotor (inner tube) can be actuated to rotate within the stator (outer tube) when the environmental temperature is high enough. A sudden stoppage of the rotor can occur when the inner tube has been actuated to rotate at a stable high speed. To find the mechanisms of such sudden stoppages, eight motor models with the same rotor but different stators are built and simulated in the canonical NVT ensembles. Numerical results demonstrate that the sudden stoppage of the rotor occurs when the difference between radii is near 0.34 nm at a high environmental temperature. A smaller difference between radii does not imply easier activation of the sudden rotor stoppage. During rotation, the positions and electron density distribution of atoms at the ends of the motor show that a sp1 bonded atom on the rotor is attracted by the sp1 atom with the biggest deviation of radial position on the stator, after which they become two sp2 atoms. The strong bond interaction between the two atoms leads to the loss of rotational speed of the rotor within 1 ps. Hence, the sudden stoppage is attributed to two factors: the deviation of radial position of atoms at the stator’s ends and the drastic thermal vibration of atoms on the rotor in rotation. For a stable motor, sudden stoppage could be avoided by reducing deviation of the radial position of atoms at the stator’s ends. A nanobrake can be, thus, achieved by adjusting a sp1 atom at the ends of stator to stop the rotation of rotor quickly. read less USED (high confidence) A. Galashev and A. A. Galasheva, “Computer simulation of cluster bombardment of a lead film on graphene,” High Energy Chemistry. 2015. link Times cited: 4 USED (high confidence) J. Ma, Y. Ni, S. Volz, and T. Dumitricǎ, “Thermal Transport in Single-Walled Carbon Nanotubes Under Pure Bending,” Physical review applied. 2015. link Times cited: 20 Abstract: Laboratoire d’Energetique Moleculaire et Macroscopique, CNRS… read moreAbstract: Laboratoire d’Energetique Moleculaire et Macroscopique, CNRS UPR 288, Ecole Centrale Paris,Grande Voie des Vignes, 92295 Châtenay-Malabry, France(Received 15 December 2014; revised manuscript received 22 January 2015; published 25 February 2015)The carbon nanotubes’ resilience to mechanical deformation is a potentially important feature forimparting tunable properties at the nanoscale. Using nonequilibrium molecular dynamics and empiricalinteratomic potentials, we examine the thermal conductivity variations with bending in the thermaltransport regime where both ballistic and diffusive effects coexist. These simulations are enabled by therealistic atomic-scale descriptions of uniformly curved and buckled nanotube morphologies obtained byimposing objective boundary conditions. We uncover a contrasting behavior. At shorter lengths, thephonon propagation is affected significantly by the occurrence of localized structural buckling. As thenanotube length becomes comparable with the phonon mean free path, heat transport becomes insensitiveto the buckling deformations. Our result settles the controversy around the differences between the currentexperimental and molecular-dynamics measurements of the thermal transport in bent nanotubes. read less USED (high confidence) Z. Qi, J. Zhang, G.-P. Zhang, and H. S. Park, “Coupling tension and shear for highly sensitive graphene-based strain sensors,” 2D Materials. 2015. link Times cited: 1 Abstract: We report, based on its variation in electronic transport to… read moreAbstract: We report, based on its variation in electronic transport to coupled tension and shear deformation, a highly sensitive graphene-based strain sensor consisting of an armchair graphene nanoribbon (AGNR) between metallic contacts. As the nominal strain at any direction increases from 2.5 to 10%, the conductance decreases, particularly when the system changes from the electrically neutral region. At finite bias voltage, both the raw conductance and the relative proportion of the conductance depend smoothly on the gate voltage with negligible fluctuations, which is in contrast to that of pristine graphene. Specifically, when the nominal strain is 10% and the angle varies from 0 ° ?> to 90 ° ?> , the relative proportion of the conductance changes from 60 to ∼90%. read less USED (high confidence) H. Yin, H. J. Qi, F. Fan, T. Zhu, B. Wang, and Y. Wei, “Griffith criterion for brittle fracture in graphene.,” Nano letters. 2015. link Times cited: 169 Abstract: There are prevailing concerns with the critical dimensions w… read moreAbstract: There are prevailing concerns with the critical dimensions when conventional theories break down. Here we find that the Griffith criterion remains valid for cracks down to 10 nm but overestimates the strength of shorter cracks. We observe the preferred crack extension along the zigzag edge in graphene, and explain this phenomenon by local strength-based failure rather than energy-based Griffith criterion. These results provide a mechanistic basis for reliable applications of graphene in miniaturized devices and nanocomposites. read less USED (high confidence) S. Kumar and D. Parks, “Strain shielding from mechanically activated covalent bond formation during nanoindentation of graphene delays the onset of failure.,” Nano letters. 2015. link Times cited: 27 Abstract: Mechanical failure of an ideal crystal is dictated either by… read moreAbstract: Mechanical failure of an ideal crystal is dictated either by an elastic instability or a soft-mode instability. Previous interpretations of nanoindentation experiments on suspended graphene sheets,1,2 however, indicate an anomaly: the inferred strain in the graphene sheet directly beneath the diamond indenter at the measured failure load is anomalously large compared to the fracture strains predicted by both soft-mode and acoustic analyses. Through multiscale modeling combining the results of continuum, atomistic, and quantum calculations, and analysis of experiments, we identify a strain-shielding effect initiated by mechanochemical interactions at the graphene-indenter interface as the operative mechanism responsible for this anomaly. Transmission electron micrographs and a molecular model of the diamond indenter's tip suggest that the tip surface contains facets comprising crystallographic {111} and {100} planes. Ab initio and molecular dynamics (MD) simulations confirm that a covalent bond (weld) formation between graphene and the crystallographic {111} and {100} facets on the indenter's surface can be induced by compressive contact stresses of the order achieved in nanoindentation tests. Finite element analysis (FEA) and MD simulations of nanoindentation reveal that the shear stiction provided by the induced covalent bonding restricts relative slip of the graphene sheet at its contact with the indenter, thus initiating a local strain-shielding effect. As a result, subsequent to stress-induced bonding at the graphene-indenter interface, the spatial variation of continuing incremental strain is substantially redistributed, locally shielding the region directly beneath the indenter by limiting the buildup of strain while imparting deformation to the surrounding regions. The extent of strain shielding is governed by the strength of the shear stiction, which depends upon the level of hydrogen saturation at the indenter's surface. We show that at intermediate levels of hydrogen saturation the strain-shielding effect can enable the graphene to support experimentally determined fracture loads and displacements without prematurely reaching locally limiting states of stress and deformation. read less USED (high confidence) J. Baimova, B. Liu, S. Dmitriev, and K. Zhou, “Mechanical properties of crumpled graphene under hydrostatic and uniaxial compression,” Journal of Physics D: Applied Physics. 2015. link Times cited: 44 Abstract: A molecular dynamics study is undertaken to estimate the mec… read moreAbstract: A molecular dynamics study is undertaken to estimate the mechanical responses of crumpled graphene subjected to hydrostatic compression and uniaxial compression, respectively. The crumpled graphene is found to be a non-Hookean medium showing a non-linear stress–strain relation even for small strain and this is explained by structural changes that start to occur when a small stress is applied. Analysis of the unloading curves suggests that the elasticity limit is achieved at smaller densities under hydrostatic compression rather than under uniaxial compression. Corners of double-folded graphene flakes are formed under hydrostatic compression, while uniaxial compression results mainly in formation of single folds with less damage of the graphene lattice. read less USED (high confidence) C. Cheng, C.-L. Luo, L. Zhu, and X. Zhu, “Giant and flux controllable pumping of water molecules in a double-walled carbon nanotube,” Molecular Simulation. 2015. link Times cited: 0 Abstract: We designed a water pumping system based on double-walled ca… read moreAbstract: We designed a water pumping system based on double-walled carbon nanotube. In this system, the inner tube was fixed as the water channel, while the exterior was moved similarly to the piston motion along the axial direction to induce pumping force. Molecular dynamics simulations confirmed that the water flux is sensitive to the motion velocity of the outer tube so that giant and controllable unidirectional water flow can be achieved in this system by varying the velocity. The enhancement of the pumping ability mainly results from the carbon–water van der Waals driving forces of the exterior tube and the osmosis pressure of the water reservoir. This design may open a new way for water pumping in the field of nanodevices. read less USED (high confidence) L. Sun et al., “Graphdiyne: a two-dimensional thermoelectric material with high figure of merit,” arXiv: Mesoscale and Nanoscale Physics. 2015. link Times cited: 113 USED (high confidence) J. N. Grima et al., “Tailoring Graphene to Achieve Negative Poisson’s Ratio Properties,” Advanced Materials. 2015. link Times cited: 256 Abstract: Graphene can be made auxetic through the introduction of vac… read moreAbstract: Graphene can be made auxetic through the introduction of vacancy defects. This results in the thinnest negative Poisson's ratio material at ambient conditions known so far, an effect achieved via a nanoscale de-wrinkling mechanism that mimics the behavior at the macroscale exhibited by a crumpled sheet of paper when stretched. read less USED (high confidence) A. Galashev and O. Rakhmanova, “Computer simulation of the bombardment of a copper film on graphene with argon clusters,” Chinese Physics B. 2015. link Times cited: 10 Abstract: The process of graphene cleaning of a copper film by bombard… read moreAbstract: The process of graphene cleaning of a copper film by bombarding it with Ar13 clusters is investigated by the molecular dynamics method. The kinetic energies of the clusters are 5, 10, 20, and 30 eV and the incident angles are θ = 90°, 75°, 60°, 45°, and 0°. It is obtained that the cluster energy should be in the interval 20 eV–30 eV for effective graphene cleaning. There is no cleaning effect at vertical incidence (θ = 0°) of Ar13 clusters. The bombardments at 45° and 90° incident angles are the most effective on a moderate and large amount of deposited copper, respectively. read less USED (high confidence) M. Daly, M. Reeve, and C. V. Singh, “Effects of topological point reconstructions on the fracture strength and deformation mechanisms of graphene,” Computational Materials Science. 2015. link Times cited: 20 USED (high confidence) Y. Huang, C.-wei Song, J. Zhang, and T. Sun, “Atomistic investigation of ablation of amorphous polystyrene under femtosecond laser pulse,” Science China Physics, Mechanics & Astronomy. 2015. link Times cited: 4 USED (high confidence) X. Liu, F. Wang, and H. Wu, “Anisotropic growth of buckling-driven wrinkles in graphene monolayer,” Nanotechnology. 2015. link Times cited: 28 Abstract: We theoretically and numerically investigate the growth of b… read moreAbstract: We theoretically and numerically investigate the growth of buckling-driven wrinkles in graphene monolayers. It is found that the growth of buckling-driven wrinkles in a graphene monolayer is remarkably chirality- and size-dependent. In small sizes, the flexural response of a graphene sheet cannot be accurately described by the classical Euler regime, and the non-continuum effect leads to zigzag-along-preferred buckling. With the increase of size, the width/length ratio α of the compressed region plays an important role in the growth of buckling-driven wrinkles. When α < 0.5, the oblique buckling happens in armchair-along compression; when 0.5 < α < 1.0, the effect of edge warp leads to zigzag-along-preferred buckling. When 1.0 < α < 3.0, the potential energy density difference due to chiral bending stiffness leads to armchair-along-preferred buckling. When α > 3.0, the non-continuum effect and chiral bending stiffness can both be neglected, and the buckling in a graphene monolayer is isotropic. The chirality-along-preferred transition of compressed buckling in a graphene monolayer leads to an improved fundamental understanding of the dynamics mechanism of graphene-based nanodevices, especially for the nanodevices with high frequency response. read less USED (high confidence) K. Cai, H. Yin, N. Wei, Z. Chen, and J. Shi, “A stable high-speed rotational transmission system based on nanotubes,” Applied Physics Letters. 2015. link Times cited: 38 Abstract: A stable rotational transmission system is designed with a s… read moreAbstract: A stable rotational transmission system is designed with a single-walled carbon nanotube (SWCNT)-based motor and double-walled carbon nanotubes (DWCNTs)-based bearing. The system response is investigated using molecular dynamics (MD) simulation. It is found that the rotating motor can actuate the rotation of the inner tube in bearing because of the attraction between the two adjacent coaxial ends of motor and rotor (the inner tube in bearing). To have a stable nanostructure, each carbon atom on the adjacent ends of motor and rotor is bonded with a hydrogen atom. To obtain a stable high-speed rotational transmission system, both an armchair and a zigzag model are used in MD simulation. In each model, the motor with different diameters and rotational speeds is employed to examine the rotational transmission of corresponding DWCNTs. It is demonstrated that the long range van der Waals interaction between the adjacent ends of motor and rotor leads to a stable configuration of the adjacent ends, and further leads to a stable rotation of rotor when driven by a high-speed motor. As compared with the armchair model, the rotor in the zigzag model could reach a stable rotation mode much easier. read less USED (high confidence) M. R. Price, A. Ovcharenko, R. Thangaraj, and B. Raeymaekers, “Deformation of Ultra-Thin Diamond-Like Carbon Coatings Under Combined Loading on a Magnetic Recording Head,” Tribology Letters. 2015. link Times cited: 8 USED (high confidence) L. Hu, S. Wyant, A. Muniz, A. Ramasubramaniam, and D. Maroudas, “Mechanical behavior and fracture of graphene nanomeshes,” Journal of Applied Physics. 2015. link Times cited: 30 Abstract: We study the mechanical behavior and fracture of graphene na… read moreAbstract: We study the mechanical behavior and fracture of graphene nanomeshes (GNMs) consisting of hexagonal lattices of unpassivated circular pores based on molecular-dynamics simulations of uniaxial tensile deformation tests. We analyze the GNMs' mechanical response as a function of their porosity for porosities up to 80%. We find that the fracture strain exhibits a minimum at a porosity ∼15%, which marks the onset of a transition in the mechanical behavior of the nanomeshes; beyond this critical porosity, the GNM ductility increases and the toughness remains practically constant with increasing porosity. The mechanism of crack initiation and propagation is characterized in both cases of mechanical response. read less USED (high confidence) Y. Tian, Z. Li, and K. Cai, “Wrinkling Behaviour of Annular Graphynes under Circular Shearing Load Using Molecular Dynamics Simulations,” Nanomaterials and Nanotechnology. 2015. link Times cited: 17 Abstract: Graphyne, a novel carbon allotrope, is a two-dimensional lat… read moreAbstract: Graphyne, a novel carbon allotrope, is a two-dimensional lattice of sp2+sp1 hybridization-type carbon atoms, similar to graphene. The initiation and development of wrinkles in single-layer graphynes (α-, β-, γ-, and 6, 6, 12-graphyne) subjected to in-plane circular shearing are investigated. In comparison with graphene, wrinkle pattern and profile characterization in relation to wave number, wavelength and amplitude of graphynes are extensively explored using classic molecular-dynamics (MD) simulations. Unlike graphene, the wave numbers of graphynes increase with increasing rotational angles; the wavelengths reduce correspondingly. The amplitudes show an increasing trend, with some local drops when the rotational angles increase. The drops occur as the positions of the wave numbers increase. Graphynes have superior fracture properties to graphene, despite the densities of graphynes being far lower. The fracture rotational angles depend on the percentages of acetylenic linkages in the graphyne structures: the more acetylenic linkages, the larger the fracture rotational angles. Meanwhile, acetylenic linkages also affect the bond length strains of the graphynes during the wrinkling process. The influences of the temperature on the fracture rotational angles are also examined to obtain further insights into the mechanical properties of such kinds of carbon allotropes. The achieved results can be used as guidelines for the wrinkling control and potential applications of graphynes. read less USED (high confidence) K. Cai, Y. Li, Q.-H. Qin, and H. Yin, “Gradientless temperature-driven rotating motor from a double-walled carbon nanotube,” Nanotechnology. 2014. link Times cited: 62 Abstract: Rotation of the inner tube in a double-walled carbon nanotub… read moreAbstract: Rotation of the inner tube in a double-walled carbon nanotube (DWCNT) system with a fixed outer tube is investigated and found to be inducible by a relatively high uniform temperature (say, 300 K). We also found the mechanism of a gradientless temperature-driven rotating motor lies in the inner tube losing its geometric symmetry in a high-temperature field. This mechanism can be taken as a guide for designing a motor from such a bi-tube system. Using a computational molecular dynamics (CMD) approach and the adaptive intermolecular reactive empirical bond order (AIREBO) potential, the dynamic behavior of a bi-tube system subjected to uniformly distributed temperature is studied. In particular, the effects of environmental temperature, boundary conditions of the outer tube, and intertube gap on the dynamic behavior of the bi-tube system are investigated. Numerical examples show that a bi-tube system with the inner tube having 0.335 nm of interlayer gap produces the highest rotational speed. read less USED (high confidence) T. Korhonen and P. Koskinen, “Electromechanics of graphene spirals,” AIP Advances. 2014. link Times cited: 18 Abstract: Among the most fascinating nanostructure morphologies are sp… read moreAbstract: Among the most fascinating nanostructure morphologies are spirals, hybrids of somewhat obscure topology and dimensionality with technologically attractive properties. Here, we investigate mechanical and electromechanical properties of graphene spirals upon elongation by using density-functional tight-binding, continuum elasticity theory, and classical force field molecular dynamics. It turns out that electronic properties are governed by interlayer interactions as opposed to strain effects. The structural behavior is governed by van der Waals interaction: in its absence spirals unfold with equidistant layer spacings, ripple formation at spiral perimeter, and steadily increasing axial force; in its presence, on the contrary, spirals unfold via smooth local peeling, complex geometries, and nearly constant axial force. These electromechanical trends ought to provide useful guidelines not only for additional theoretical investigations but also for forthcoming experiments on graphene spirals. read less USED (high confidence) M. Dewapriya and R. Rajapakse, “Effects of free edges and vacancy defects on the mechanical properties of graphene,” 14th IEEE International Conference on Nanotechnology. 2014. link Times cited: 10 Abstract: Defects are unavoidable during synthesizing and fabrication … read moreAbstract: Defects are unavoidable during synthesizing and fabrication of graphene based nanoelecromechanical systems. This paper presents a comprehensive molecular dynamics simulation study on the mechanical properties of finite graphene with vacancy defects. We characterize the strength and stiffness of graphene using the concept of surface stress in three-dimensional crystals. Temperature and strain rate dependent atomistic model is also presented to evaluate the strength of defective graphene. Free edges have a significant impact on the stiffness; the strength, however, is less affected. The vacancies exceedingly degrade the strength and the stiffness of graphene. These findings provide a remarkable insight into the strength and the stiffness of defective graphene, which is critical in designing experimental and instrumental applications. read less USED (high confidence) A. Shakouri, J. Yeo, T. Ng, Z. Liu, and H. Taylor, “Superlubricity-activated thinning of graphite flakes compressed by passivated crystalline silicon substrates for graphene exfoliation,” Carbon. 2014. link Times cited: 4 USED (high confidence) Y. Huang, S. Zhu, and T. Li, “Directional transport of molecular mass on graphene by straining,” Extreme Mechanics Letters. 2014. link Times cited: 22 USED (high confidence) Z. Ye and A. Martini, “Atomistic simulation of the load dependence of nanoscale friction on suspended and supported graphene.,” Langmuir : the ACS journal of surfaces and colloids. 2014. link Times cited: 33 Abstract: Suspended graphene exhibits distinct behavior in which nanos… read moreAbstract: Suspended graphene exhibits distinct behavior in which nanoscale friction first increases and then decreases with load; this is in contrast to the monotonic increase of friction with load exhibited by most materials, including graphene supported by a substrate. In this work, these friction trends are reproduced for the first time using molecular dynamics simulations of a nanoscale probe scanning on suspended and supported graphene. The atomic-scale detail available in the simulations is used to correlate friction trends to the presence and size of a wrinkle on the graphene surface in front of the probe. The simulations also provide information about how frictional load dependence is affected by the size of the graphene, the size of the probe, and the strength of the interaction between graphene and probe. read less USED (high confidence) Y. D. Fomin, E. N. Tsiok, and V. Ryzhov, “The behavior of benzene confined in a single wall carbon nanotube,” Journal of Computational Chemistry. 2014. link Times cited: 14 Abstract: We present the molecular dynamics study of benzene molecules… read moreAbstract: We present the molecular dynamics study of benzene molecules confined into the single wall carbon nanotube. The local structure and orientational ordering of benzene molecules are investigated. It is found that the molecules mostly group in the middle distance from the axis of the tube to the wall. The molecules located in the vicinity of the wall demonstrate some deviation from planar shape. There is a tilted orientational ordering of the molecules which depends on the location of the molecule. It is shown that the diffusion coefficient of the benzene molecules is very small at the conditions we report here. © 2015 Wiley Periodicals, Inc. read less USED (high confidence) L. Hu and A. McGaughey, “Thermal conductance of the junction between single-walled carbon nanotubes,” Applied Physics Letters. 2014. link Times cited: 33 Abstract: The thermal conductances of the carbon nanotube (CNT) juncti… read moreAbstract: The thermal conductances of the carbon nanotube (CNT) junctions that would be found in a CNT aerogel are predicted using molecular dynamics simulations. At a temperature of 300 K, the thermal conductance of a perpendicular junction converges to 40 pW/K as the CNT lengths approach 100 nm. The key geometric parameter affecting the thermal conductance is the angle formed by the two CNTs. At pressures above 1 bar, the presence of a surrounding gas leads to an effective increase in the junction thermal conductance by providing a parallel path for energy flow. read less USED (high confidence) L. Hu and D. Maroudas, “Thermal transport properties of graphene nanomeshes,” Journal of Applied Physics. 2014. link Times cited: 25 Abstract: Using molecular-dynamics simulations, we study the thermal t… read moreAbstract: Using molecular-dynamics simulations, we study the thermal transport properties of graphene nanomeshes (GNMs) as a function of material density, pore morphology, pore edge passivation, and the lattice arrangement of the nanomesh pores. Relations for the density dependence of the GNMs' thermal conductivity are established. For GNMs with circular pores, we find that the thermal conductivity is an exponential function of the GNM's neck width with a very weak dependence on the pore lattice structure and pore edge passivation. For GNMs with elliptical pores, the thermal conductivity becomes anisotropic and this anisotropy becomes stronger with decreasing GNM density. read less USED (high confidence) A. Galashev and O. Rakhmanova, “Formation of a copper film on the graphene surface: A molecular dynamic study,” Russian Journal of Physical Chemistry B. 2014. link Times cited: 1 USED (high confidence) Z. Ye, A. Otero-de-la-Roza, E. Johnson, and A. Martini, “The role of roughness-induced damping in the oscillatory motion of bilayer graphene,” Nanotechnology. 2014. link Times cited: 5 Abstract: A multi-scale theoretical model is presented that is the fir… read moreAbstract: A multi-scale theoretical model is presented that is the first to offer quantitative agreement with experimental measurements of self-retraction and oscillation of bilayer graphene. The model integrates density-functional theory calculations of the energetics driving flake retraction and molecular-dynamics simulations capturing the dynamic response of laterally-offset rough surfaces. We demonstrate that nanoscale roughness explains self-retraction motion and propose a recipe for tuning that motion by controlling friction. read less USED (high confidence) B.-cheng Yang et al., “Strength and failure behavior of a graphene sheet containing bi-grain-boundaries,” RSC Advances. 2014. link Times cited: 61 Abstract: By using molecular dynamics simulations, the mechanical prop… read moreAbstract: By using molecular dynamics simulations, the mechanical properties and failure mechanisms of a graphene sheet containing bi-grain-boundaries were examined. The results reveal that both temperature and density of defects play central roles in the mechanical characteristics of graphene containing bi-grain-boundaries. By increasing the temperature, the tensile strength and fracture strain significantly decrease. The graphene containing high density defects is much stronger than that containing lower density defects. The dependence of Young's modulus on temperature is also investigated. The results also show that the failure processes of graphene sheets containing bi-grain-boundaries are dominated by brittle cracking. read less USED (high confidence) H. M. Yoon, J. S. Lee, J. Yeo, and J. S. Lee, “Fluid interfacial nanoroughness measurement through the morphological characteristics of graphene.,” Biomicrofluidics. 2014. link Times cited: 7 Abstract: The interfacial nanoroughness of liquid plays an important r… read moreAbstract: The interfacial nanoroughness of liquid plays an important role in the reliability of liquid lenses, capillary waves, and mass transfer in biological cells [Grilli et al., Opt. Express 16, 8084 (2008), Wang et al., IEEE Photon. Technol. Lett. 18, 2650 (2006), and T. Fukuma et al., 92, 3603 (2007)]. However, the nanoroughness of liquid is hard to visualize or measure due to the instability and dynamics of the liquid-gas interface. In this study, we blanket a liquid water surface with monolayer graphene to project the nanoroughness of the liquid surface. Monolayer graphene can project the surface roughness because of the extremely high flexibility attributed to its one atomic thickness. The interface of graphene and water is successfully mimicked by the molecular dynamics method. The nanoroughness of graphene and water is defined based on density distribution. The correlation among the roughness of graphene and water is developed within a certain temperature range (298-390 K). The results show that the roughness of water surface is successfully transferred to graphene surface. Surface tension is also calculated with a simple water slab. The rise of temperature increased the roughness and decreased the surface tension. Finally, the relationship between graphene roughness and surface tension is fitted with a second-order polynomial equation. read less USED (high confidence) A. Galashev, “Computer simulation of the thermal stability of nickel films on two-layer graphene,” High Temperature. 2014. link Times cited: 14 USED (high confidence) A. Galashev and V. Polukhin, “Compaction of a copper film on graphene by argon-beam bombardment: Computer experiment,” Journal of Surface Investigation. X-ray, Synchrotron and Neutron Techniques. 2014. link Times cited: 15 USED (high confidence) Y. A. Baimova, R. Murzaev, S. V. Dmitriev, and S. V. Dmitriev, “Mechanical properties of bulk carbon nanomaterials,” Physics of the Solid State. 2014. link Times cited: 23 USED (high confidence) A. Galashev and O. Rakhmanova, “Mechanical and thermal stability of graphene and graphene-based materials,” Physics—Uspekhi. 2014. link Times cited: 113 Abstract: Graphene has rapidly become one of the most popular material… read moreAbstract: Graphene has rapidly become one of the most popular materials for technological applications and a test material for new condensed matter ideas. This paper reviews the mechanical properties of graphene and effects related to them that have recently been discovered experimentally or predicted theoretically or by simulation. The topics discussed are of key importance for graphene's use in integrated electronics, thermal materials, and electromechanical devices and include the following: graphene transformation into other hybridization forms; stability to stretching and compression; ion-beam-induced structural modifications; how defects and graphene edges affect the electronic properties and thermal stability of graphene and related composites. read less USED (high confidence) Y. Li, D. Datta, S. Li, Z. Li, and V. Shenoy, “Patterned arrangement regulated mechanical properties of hydrogenated graphene,” Computational Materials Science. 2014. link Times cited: 9 USED (high confidence) T. Panczyk, P. Wolski, A. Jagusiak, and M. Drach, “Molecular dynamics study of Congo red interaction with carbon nanotubes,” RSC Advances. 2014. link Times cited: 21 Abstract: This work deals with molecular dynamics simulations of Congo… read moreAbstract: This work deals with molecular dynamics simulations of Congo red (CR) interaction with carbon nanotubes (CNT). We studied several combinations of systems parameters in order to assess how the nanotube diameter and Congo red density affect the structure and stability of CNT–CR conjugates at various pH conditions. We found that, at the considered conditions, the CR binds strongly to the CNT surfaces and the CNT–CR conjugates are thermodynamically stable according to the determined values of the free energies. Adsorption on wider nanotubes is stronger than on the narrow ones and larger densities of CR on the CNT surfaces lead to weakening of binding energy per single CR molecule. Changes of pH, that is varying concentration of protonated and deprotonated forms of CR, lead to significant changes in binding energies as well as to qualitative changes of the structure of the adsorbed CR. It was found that at pH > 5.5 the CR molecules readily occupy inner cavities of the nanotubes. Upon lowering pH the occupation of the inner space of CNTs is strongly reduced and the preferred configuration is formation of a densely packed CR layer on the sidewalls of the CNT. This effect can potentially be utilized in pH controlled corking/uncorking of carbon nanotubes in water solutions. read less USED (high confidence) M. Ky and Y. Yum, “Mode I fracture toughness analysis of a single-layer grapheme sheet,” Journal of Mechanical Science and Technology. 2014. link Times cited: 13 USED (high confidence) Y. Zhang, Q. Pei, Y. Mai, and Y. T. Gu, “Temperature and strain-rate dependent fracture strength of graphynes,” Journal of Physics D: Applied Physics. 2014. link Times cited: 52 Abstract: Graphyne is an allotrope of graphene. The mechanical propert… read moreAbstract: Graphyne is an allotrope of graphene. The mechanical properties of graphynes (α-, β-, γ- and 6,6,12-graphynes) under uniaxial tension deformation at different temperatures and strain rates are studied using molecular dynamics simulations. It is found that graphynes are more sensitive to temperature changes than graphene in terms of fracture strength and Young's modulus. The temperature sensitivity of the different graphynes is proportionally related to the percentage of acetylenic linkages in their structures, with the α-graphyne (having 100% of acetylenic linkages) being most sensitive to temperature. For the same graphyne, temperature exerts a more pronounced effect on the Young's modulus than fracture strength, which is different from that of graphene. The mechanical properties of graphynes are also sensitive to strain rate, in particular at higher temperatures. read less USED (high confidence) S. Wang, B.-cheng Yang, S. Zhang, J. Yuan, Y. Si, and H. Chen, “Mechanical properties and failure mechanisms of graphene under a central load.,” Chemphyschem : a European journal of chemical physics and physical chemistry. 2014. link Times cited: 39 Abstract: By employing molecular dynamics simulations, the evolution o… read moreAbstract: By employing molecular dynamics simulations, the evolution of deformation of a monolayer graphene sheet under a central transverse loading are investigated. Dependence of mechanical responses on the symmetry (shape) of the loading domain, on the size of the graphene sheet, and on temperature, is determined. It is found that the symmetry of the loading domain plays a central role in fracture strength and strain. By increasing the size of the graphene sheet or increasing temperature, the tensile strength and fracture strain decrease. The results have demonstrated that the breaking force and breaking displacement are sensitive to both temperature and the symmetry of the loading domain. In addition, we find that the intrinsic strength of graphene under a central load is much smaller than that of graphene under a uniaxial load. By examining the deformation processes, two failure mechanisms are identified namely, brittle bond breaking and plastic relaxation. In the second mechanism, the Stone-Wales transformation occurs. read less USED (high confidence) Y. Huang, C.-wei Song, J. Zhang, and T. Sun, “Atomistic investigation of ablation of amorphous polystyrene under femtosecond laser pulse,” Science China Physics, Mechanics & Astronomy. 2014. link Times cited: 0 USED (high confidence) V. Munizaga, G. García, E. Bringa, M. Weissmann, R. Ramírez, and M. Kiwi, “Atomistic simulation of soldering iron filled carbon nanotubes,” Computational Materials Science. 2014. link Times cited: 4 USED (high confidence) M. Ky and Y. Yum, “Mode I fracture toughness analysis of a single-layer grapheme sheet,” Journal of Mechanical Science and Technology. 2014. link Times cited: 0 USED (high confidence) M. L. Minus, “Studying the Dependency of Interfacial Formation with Carbon Nanotube.” 2014. link Times cited: 0 Abstract: : The proposed work was focused on understanding the capabil… read moreAbstract: : The proposed work was focused on understanding the capabilities of polymeric materials to form interfacial structures around carbon nanotubes and other nano-carbon materials. The proposed effort led to the development of a new processing route for dispersing nano-carbons in dilute polymer solutions. This dispersion process involved steps of sonication, shearing, and crystallization. The specific combination of these processes resulted in the formation of polymer interfacial growth (i.e., interphase structures) on the nano-carbon surfaces. The interphase formed consisted of either extended-chain or folded-chain polymer crystals depending on the processing route used. This processing approach for the dispersion of nano-carbons and formation of polymer interphase was implemented into fiber processing procedures. In general, these studies showed that the inclusion of interphase structures in the composite fibers led to dramatic increases in the mechanical properties. Beyond mechanical enhancement, the composite fiber morphology was also examined to understand the fundamental links between the processing route use and the resultant structure-property relationship. read less USED (high confidence) D. Cohen-Tanugi and J. Grossman, “Water permeability of nanoporous graphene at realistic pressures for reverse osmosis desalination.,” The Journal of chemical physics. 2014. link Times cited: 188 Abstract: Nanoporous graphene (NPG) shows tremendous promise as an ult… read moreAbstract: Nanoporous graphene (NPG) shows tremendous promise as an ultra-permeable membrane for water desalination thanks to its atomic thickness and precise sieving properties. However, a significant gap exists in the literature between the ideal conditions assumed for NPG desalination and the physical environment inherent to reverse osmosis (RO) systems. In particular, the water permeability of NPG has been calculated previously based on very high pressures (1000-2000 bars). Does NPG maintain its ultrahigh water permeability under real-world RO pressures (<100 bars)? Here, we answer this question by drawing results from molecular dynamics simulations. Our results indicate that NPG maintains its ultrahigh permeability even at low pressures, allowing a permeate water flux of 6.1 × 10−15 l/h bar per pore [Corrected], or equivalently 1041 ± 20 l/m(2)-h-bar assuming a nanopore density of 1.7 × 10(13) cm(-2). read less USED (high confidence) Z. Sha et al., “Inverse Pseudo Hall-Petch Relation in Polycrystalline Graphene,” Scientific Reports. 2014. link Times cited: 72 USED (high confidence) M. Becton, L. Zhang, and X. Wang, “Mechanics of graphyne crumpling.,” Physical chemistry chemical physics : PCCP. 2014. link Times cited: 29 Abstract: The recent capability of synthesizing large-scale crumpled g… read moreAbstract: The recent capability of synthesizing large-scale crumpled graphene-related 2D materials has motivated intensive efforts to boost its promising applications in electronics, energy storage, composites and biomedicine. As deformation of graphene-related 2D materials can strongly affect their properties and the performance of graphene-based devices and materials, it is highly desirable to attain subtle control of reversible wrinkling and crumpling of graphene. Graphyne, a 2D lattice of sp(2)- and sp(1)-hybridized carbons similar to graphene, has remained unexplored with respect to its crumpling behavior. Here we employ molecular dynamics simulation to explore the behavior of graphynes under geometric confinement across various temperatures, sizes, and crumpling rates and compare them to graphene under the same conditions, with a focus on the mechanical stabilizing mechanisms and properties of the crumpled structures. The lower density of graphynes creates less deformation-induced bending energy than graphene; as such the graphynes exhibit a markedly increased propensity for stable crumpling. It is also shown that the crumpled 2D carbon materials demonstrate the hardness and bulk modulus of an equivalent magnitude with crumpled graphene, with the most important behavior-determining factor being the number of linking sp(1)-hybridized carbons in the material. Our results show that irrespective of the initial geometry and crumpling rate, the final structures present intriguing and useful properties which can be incorporated into crumpled graphene structures. read less USED (high confidence) J. Meng, Y. Zhang, S. W. Cranford, and M. L. Minus, “Nanotube dispersion and polymer conformational confinement in a nanocomposite fiber: a joint computational experimental study.,” The journal of physical chemistry. B. 2014. link Times cited: 30 Abstract: A combination of computational and experimental methods was … read moreAbstract: A combination of computational and experimental methods was implemented to understand and confirm that conformational changes of a polymer [specifically polyacrylonitrile (PAN)] vary with the dispersion quality and confinement between single-wall carbon nanotubes (SWNT) in the composite fibers. A shear-flow gel-spinning approach was utilized to produce PAN-based composite fibers with high concentration (i.e., loading of 10 wt %) of SWNT. Dispersion qualities of SWNT ranging from low to high were identified in the fibers, and their effects on the structural morphologies and mechanical properties of the composites were examined. These results show that, as the SWNT dispersion quality in terms of distribution in the fiber and exfoliation increases, PAN conformations were confined to the extended-chain form. Full atomistic computational results show that the surface interaction energy between isolated PAN and SWNT was not preferred, leading to the self-agglomeration of PAN. However, confinement of the polymer chains between SWNT bundles or individual tubes (i.e., molecular crowding) resulted in large increases in the PAN-SWNT interaction energy. In other words, the crowding of polymer chains by the SWNT at high concentrations can promote extended-chain conformational development during fiber spinning. This was also evidenced experimentally by the observance of significantly improved PAN orientation and crystallization in the composite. Ultimately this work provides fundamental insight toward the specific structural changes capable at the polymer/nanotube interface which are important toward improvement of the effective contribution of the SWNT to the mechanical performance of the composite. read less USED (high confidence) B. Yang, H. Souri, S. Kim, S. Ryu, and H. Lee, “An analytical model to predict curvature effects of the carbon nanotube on the overall behavior of nanocomposites,” Journal of Applied Physics. 2014. link Times cited: 19 Abstract: In this study, analytical expressions are introduced to prov… read moreAbstract: In this study, analytical expressions are introduced to provide a better understanding of carbon nanotubes (CNTs) curvature on the overall behavior of nanocomposites. The curviness of CNT is modeled as the wave geometries, and the transformed physical characteristics are applied to micromechanical framework. Since five independent elastic constants of CNTs are essential to derive the waviness effect, atomistic molecular statics simulations with varying nanotube radii are conducted. Influences of CNT curviness on the effective stiffness of the nanocomposites are analyzed, noting that the curvature effect is significantly influential on the effective stiffness of the nanocomposites, and it may improve or reduce the reinforcing effect depending on the orientation of CNTs. In addition, the predictions are compared with experimental data of the CNT-reinforced nanocomposites to assess the reliability of the proposed method. The developed constitutive model is expected to be used to determine the volume concentration of the reinforcing CNTs and mechanical responses of CNT-reinforced composites under various CNT curvature, radius, and orientation conditions. read less USED (high confidence) J. Park and V. Prakash, “Phonon scattering and thermal conductivity of pillared graphene structures with carbon nanotube-graphene intramolecular junctions,” Journal of Applied Physics. 2014. link Times cited: 25 Abstract: We present results of a reverse non-equilibrium molecular dy… read moreAbstract: We present results of a reverse non-equilibrium molecular dynamics study of thermal transport in single-walled carbon nanotube (SWCNT)-graphene junctions comprised of carbon-carbon (C-C) bonds with either sp2 or mixed sp2/sp3 hybridization. In both cases, a finite interfacial thermal resistance is observed at the SWCNT-graphene junctions for thermal transport in the out-of-plane direction. The interfacial thermal resistance at the junctions is attributed to the combined effects of scattering of the phonons at the SWCNT-graphene junctions due to the presence of distorted sp2 bonds in the junction region and the change in dimensionality of the medium along the phonon transport path as the phonons propagate from SWCNT pillars (quasi-1D) to graphene sheet (2D) and then again to SWCNTs. Moreover, the thermal resistance is found to depend on the C-C bond hybridization at the intramolecular junctions with mixed sp2/sp3 hybridization showing a higher interfacial resistance when compared to pure sp2 bonding. Therm... read less USED (high confidence) P. Romero, L. Pastewka, J. V. Lautz, and M. Moseler, “Surface passivation and boundary lubrication of self-mated tetrahedral amorphous carbon asperities under extreme tribological conditions,” Friction. 2014. link Times cited: 26 USED (high confidence) A. Galashev and O. Rakhmanova, “Numerical simulation of heating an aluminum film on two-layer graphene,” High Temperature. 2014. link Times cited: 14 USED (high confidence) N. Li, Z. Sha, Q. Pei, and Y.-W. Zhang, “Hydrogenated Grain Boundaries Control the Strength and Ductility of Polycrystalline Graphene,” Journal of Physical Chemistry C. 2014. link Times cited: 38 Abstract: In the growth of polycrystalline graphene via chemical vapor… read moreAbstract: In the growth of polycrystalline graphene via chemical vapor deposition, grain boundaries (GBs) were shown to be energetically favorable sites for hydrogenation. Thus, it is of both scientific interest and technological significance to understand how hydrogenation on GBs affects the mechanical properties of polycrystalline graphene. Here we perform molecular dynamics simulations to investigate the mechanical properties of hydrogenated polycrystalline graphene. Our simulations reveal that the fracture strength of hydrogenated polycrystalline graphene is significantly reduced by the combined weakening effect of bond prestraining in highly defective GBs and sp3 hybridization of hydrogenated GB atoms. In addition, this reduction in fracture strength due to GB hydrogenation is observed in polycrystalline graphene samples of different grain sizes ranging from 2.5 to 10 nm. Our findings show that the loss of mechanical strength due to GB hydrogenation must be taken into account in the application of polycrystall... read less USED (high confidence) X. Liu, F. Wang, H. Wu, and W. Wang, “Strengthening metal nanolaminates under shock compression through dual effect of strong and weak graphene interface,” Applied Physics Letters. 2014. link Times cited: 78 Abstract: We use molecular dynamics method to study the strengthening … read moreAbstract: We use molecular dynamics method to study the strengthening effect of graphene-metal nanolayered composites under shock loading. The graphene interfaces have the advantages of both strong and weak interfacial features simultaneously, which solves a strengthening paradox of interfacial structures. On one hand, the weak bending stiffness of graphene leads to interlayer reflections and weakening the shock wave. On the other hand, the strong in-plane sp2-bonded structures constrain the dislocations and heal the material. The elastic recovery due to graphene interfacial constraints plays an important role in the strengthening effect, and the shock strength can be enhanced by decreasing the interlayer distance. This interface with strong/weak duality should lead to an improved fundamental understanding on the dynamic mechanism of composites with interfacial structures. read less USED (high confidence) S. Zhu and T. Li, “Wrinkling Instability of Graphene on Substrate-Supported Nanoparticles,” Journal of Applied Mechanics. 2014. link Times cited: 26 Abstract: Wrinkles in graphene with desirable morphology have practica… read moreAbstract: Wrinkles in graphene with desirable morphology have practical significance for electronic applications. Here we carry out a systematic molecular dynamics study of the wrinkling instability of graphene on substrate-supported nanoparticles (NPs). At a large NP dispersion distance, a monolayer graphene adheres to the substrate and bulges out locally to wrap around individual NPs, forming isolated dome-shaped protrusions. At a small NP dispersion distance, tunneling wrinkles form in graphene to bridge the NP-induced protrusions. A critical NP dispersion distance for the onset of tunneling wrinkle instability of graphene is determined as a function of the NP size. The prediction from the modeling study agrees well with recent experimental observations. Results from the present study offer further insights into the formation of desirable wrinkles in graphene deposited on a substrate with engineered protrusions and, thus, can potentially enable novel design of graphene-based electronics. read less USED (high confidence) Y. Jhon, Y. Jhon, G. Yeom, and M. Jhon, “Corrigendum to ‘Orientation dependence of the fracture behavior of graphene.’” 2014. link Times cited: 0 USED (high confidence) X. Meng, M. Li, Z. Kang, and J. Xiao, “Folding of multi-layer graphene sheets induced by van der Waals interaction,” Acta Mechanica Sinica. 2014. link Times cited: 0 USED (high confidence) N. A. A. Krishnan and D. Ghosh, “A novel method for studying the buckling of nanotubes considering geometrical imperfections,” Applied Physics A. 2014. link Times cited: 2 USED (high confidence) A. Galashev and V. Polukhin, “Computer analysis of the stability of copper films on graphene,” Russian Journal of Physical Chemistry A. 2014. link Times cited: 15 USED (high confidence) X. Meng, M. Li, Z. Kang, and J. Xiao, “Folding of multi-layer graphene sheets induced by van der Waals interaction,” Acta Mechanica Sinica. 2014. link Times cited: 19 USED (high confidence) A. Galashev, “Computer simulation of heating of nickel films on two-layer graphene,” Physics of the Solid State. 2014. link Times cited: 5 USED (high confidence) L. Chen and S. Kumar, “Heat Dissipation Mechanism at Carbon Nanotube Junctions on Silicon Oxide Substrate,” Journal of Heat Transfer-transactions of The Asme. 2014. link Times cited: 7 Abstract: This study investigates heat dissipation at carbon nanotube … read moreAbstract: This study investigates heat dissipation at carbon nanotube (CNT) junctions supported on silicon dioxide substrate using molecular dynamics simulations. The temperature rise in a CNT (~top CNT) not making direct contact with the oxide substrate but only supported by other CNTs (~bottom CNT) is observed to be hundreds of degree higher compared to the CNTs well-contacted with the substrate at similar power densities. The analysis of spectral temperature decay of CNT-oxide system shows very fast intra-tube energy transfer in a CNT from high frequency band to intermediate frequency bands. The low frequency phonon band (0-5 THz) of top CNT shows two-stage energy relaxation which results from the efficient coupling of low frequency phonons in the CNT-oxide system and the blocking of direct transport of high and intermediate frequency phonons of top CNT to the oxide substrate by bottom CNT. read less USED (high confidence) N. Orekhov and V. Stegailov, “Molecular dynamics simulation of graphite melting,” High Temperature. 2014. link Times cited: 20 USED (high confidence) K. Gordiz and S. M. V. Allaei, “Thermal rectification in pristine-hydrogenated carbon nanotube junction: A molecular dynamics study,” Journal of Applied Physics. 2014. link Times cited: 31 Abstract: Using non-equilibrium molecular dynamics method, we investig… read moreAbstract: Using non-equilibrium molecular dynamics method, we investigate thermal rectification (TR) in hybrid pristine carbon nanotube (PCNT) and hydrogenated carbon nanotube (HCNT) structures. The interface thermal resistance of the junction is dependent on the direction of thermal transport, leading to TR. We show that by selecting nanotubes of smaller diameters, and/or increasing the hydrogen coverage of HCNT, the TR can be amplified. The observed TR does not decrease by increasing the system length, which presents PCNT/HCNT system as a promising thermal rectifier at room temperature. read less USED (high confidence) K. Cai, H. Yin, Q. Qin, and Y. Li, “Self-excited oscillation of rotating double-walled carbon nanotubes.,” Nano letters. 2014. link Times cited: 92 Abstract: The oscillatory behavior of a double-walled carbon nanotubes… read moreAbstract: The oscillatory behavior of a double-walled carbon nanotubes with a rotating inner tube is investigated using molecular dynamics simulation. In the simulation, one end of the outer tube is assumed to be fixed and the other is free. Without any prepullout of the rotating inner tube, it is interesting to observe that self-excited oscillation can be triggered by nonequilibrium attraction of the ends of two tubes. The oscillation amplitude increases until it reaches its maximum with decrease of the rotating speed of the inner tube. The oscillation of a bitube is sensitive to the gap between two walls. Numerical results also indicate that the zigzag/zigzag commensurate model with a larger gap of >0.335 nm can act as a terahertz oscillator, and the armchair/zigzag incommensurate model plays the role of a high amplitude oscillator with the frequency of 1 GHz. An oblique chiral model with a smaller gap of <0.335 nm is unsuitable for the oscillator because of the steep damping of oscillation. read less USED (high confidence) S. Hartmann et al., “Molecular dynamic simulations of maximum pull-out forces of embedded CNTs for sensor applications and validating nano scale experiments,” 2014 15th International Conference on Thermal, Mechanical and Mulit-Physics Simulation and Experiments in Microelectronics and Microsystems (EuroSimE). 2014. link Times cited: 2 Abstract: We present investigations of pull-out tests on CNTs embedded… read moreAbstract: We present investigations of pull-out tests on CNTs embedded in palladium by means of molecular dynamics (MD) and compare our results of maximum pull-out forces with values of nano scale in situ pull-out tests inside a scanning electron microscope (SEM). Our MD model allows the investigation of crucial influencing parameters on the interface behaviour, like CNT diameter, intrinsic CNT defects and functional groups. For the experiments we prepared simple specimens using silicon substrates and wafer level compliant technologies. We realised the nano scale experiment with a nanomanipulation system supporting an AFM cantilever with known stiffness as a force sensing element inside a SEM. Greyscale correlation has been used to evaluate the cantilever deflection. From simulations derived maximum pull-out forces are approximately 17 nN and depend on the existence of intrinsic defects or functional groups and weakly on temperature. Experimentally obtained maximum pull-out forces with values between 16-29 nN are in good agreement with the computational predictions. Our results are of significant interest for the design and a failure-mechanistic treatment of future mechanical sensors with integrated single-walled CNTs showing high piezoresistive gauge factor or other nano scale systems incorporating CNT-metal interfaces. read less USED (high confidence) N. W. McNutt, Q. Wang, O. Rios, and D. Keffer, “Entropy-driven structure and dynamics in carbon nanocrystallites,” Journal of Nanoparticle Research. 2014. link Times cited: 12 USED (high confidence) R. Fang, Y. Z. He, K. Zhang, and H. Li, “Melting Behavior of Aluminum Nanowires in Carbon Nanotubes,” Journal of Physical Chemistry C. 2014. link Times cited: 28 Abstract: Molecular dynamics simulation has been performed to study me… read moreAbstract: Molecular dynamics simulation has been performed to study melting behavior of aluminum nanowires (NWs) encapsulated in armchair single-walled carbon nanotubes (SWCNTs). Results show that intriguing phenomena may appear when the diameters of the inner NWs exceed a threshold value that melting occurs first at the inner layers, followed by the diffusion of the inner atoms toward the surface layers. Two melting temperatures can be obtained while the first one is even lower than that of the free-standing one in some cases and the second one is slightly higher than the bulk. The lengths of the tubes also have a great effect on the melting behavior of the inner NWs. This abnormal melting behavior is might due to the van der Waals potential well in SWCNTs. read less USED (high confidence) A. Galashev and A. A. Galasheva, “Molecular dynamics simulation of copper removal from graphene by Bombardment with argon clusters,” High Energy Chemistry. 2014. link Times cited: 15 USED (high confidence) S. Zhu and T. Li, “Hydrogenation-assisted graphene origami and its application in programmable molecular mass uptake, storage, and release.,” ACS nano. 2014. link Times cited: 159 Abstract: The malleable nature of atomically thin graphene makes it a … read moreAbstract: The malleable nature of atomically thin graphene makes it a potential candidate material for nanoscale origami, a promising bottom-up nanomanufacturing approach to fabricating nanobuilding blocks of desirable shapes. The success of graphene origami hinges upon precise and facile control of graphene morphology, which still remains as a significant challenge. Inspired by recent progresses on functionalization and patterning of graphene, we demonstrate hydrogenation-assisted graphene origami (HAGO), a feasible and robust approach to enabling the formation of unconventional carbon nanostructures, through systematic molecular dynamics simulations. A unique and desirable feature of HAGO-enabled nanostructures is the programmable tunability of their morphology via an external electric field. In particular, we demonstrate reversible opening and closing of a HAGO-enabled graphene nanocage, a mechanism that is crucial to achieve molecular mass uptake, storage, and release. HAGO holds promise to enable an array of carbon nanostructures of desirable functionalities by design. As an example, we demonstrate HAGO-enabled high-density hydrogen storage with a weighted percentage exceeding the ultimate goal of US Department of Energy. read less USED (high confidence) R. N. Salaway and L. Zhigilei, “Molecular dynamics simulations of thermal conductivity of carbon nanotubes: Resolving the effects of computational parameters,” International Journal of Heat and Mass Transfer. 2014. link Times cited: 97 USED (high confidence) A. Capasso et al., “Graphene ripples generated by grain boundaries in highly ordered pyrolytic graphite.” 2014. link Times cited: 35 USED (high confidence) A. Pokropivny, Y. Ni, Y. Chalopin, Y. Solonin, and S. Volz, “Tailoring properties of graphene with vacancies,” physica status solidi (b). 2014. link Times cited: 11 Abstract: The influence of vacancy defects on the electronic and phono… read moreAbstract: The influence of vacancy defects on the electronic and phonon properties of graphene is studied with the models based on a unit cell of 180 carbon atoms and of 1, 2, 3, 6, and 24 vacancies. Ordered, with one defect per unit cell, and non‐ordered (randomly arranged) vacancies are calculated with first‐principle and molecular dynamics methods. Randomly oriented vacancies lead to a creation of characteristic V1(5‐9) defects and the amorphization of graphene with different rings. Electronic and phonon densities of states are analyzed. The switching of the electrical conductivity from metal to semiconductor type is observed when increasing the defect sizes from a single vacancy to large clusters. The characteristic phonon modes are found in all these cases for their future experimental identification. Novel types of devices are proposed via doping of defective graphene. read less USED (high confidence) F. Eder, J. Kotakoski, U. Kaiser, and J. C. Meyer, “A journey from order to disorder — Atom by atom transformation from graphene to a 2D carbon glass,” Scientific Reports. 2014. link Times cited: 73 USED (high confidence) X.-Y. Li, Y. He, Y. Wang, J. Dong, and H. Li, “Dewetting Properties of Metallic Liquid Film on Nanopillared Graphene,” Scientific Reports. 2014. link Times cited: 23 USED (high confidence) X. Shi, Q. Yin, N. Pugno, and H. Gao, “Tunable Mechanical Behavior of Carbon Nanoscroll Crystals Under Uniaxial Lateral Compression,” Journal of Applied Mechanics. 2014. link Times cited: 10 Abstract: A theoretical model is developed to investigate the mechanic… read moreAbstract: A theoretical model is developed to investigate the mechanical behavior of closely packed carbon nanoscrolls (CNSs), the so-called CNS crystals, subjected to uniaxial lateral compression/ decompression. Molecular dynamics simulations are performed to verify the model predictions. It is shown that the compression behavior of a CNS crystal can exhibit strong hysteresis that may be tuned by an applied electric field. The present study demonstrates the potential of CNSs for applications in energy-absorbing materials as well as nanodevices, such as artificial muscles, where reversible and controllable volumetric deformations are desired. read less USED (high confidence) M. Becton and X. Wang, “Thermal Gradients on Graphene to Drive Nanoflake Motion.,” Journal of chemical theory and computation. 2014. link Times cited: 60 Abstract: Thermophoresis has been emerging as a novel technique for ma… read moreAbstract: Thermophoresis has been emerging as a novel technique for manipulating nanoscale particles. Materials with good thermal conductivity and low surface friction, such as graphene, are best suited to serve as a platform for solid-solid transportations or manipulations. Here we employ nonequilibrium molecular dynamics simulations to explore the feasibility of utilizing a thermal gradient on a large graphene substrate to control the motion of a small graphene nanoflake on it. Attempts to systematically investigate the mechanism of graphene-graphene transportation have centered on the fundamental driving mechanism of the motion and the quantitative effect of significant parameters such as temperature gradient and geometry of graphene on the motion of the nanoflake. Simulation results have demonstrated that temperature gradient plays the pivotal role in the evolution of the motion of the nanoflake on the graphene surface. Also, the geometry of nanoflakes has presented an intriguing signature on the motion of the nanoflake, which shows the nanoflakes with a circular shape move slower but rotate faster than other shapes with the identical area. It reveals that edge effects can stabilize the angular motion of thermophoretically driven particles. An interesting relation between the effective initial driving force and temperature gradient has been quantitatively captured by employing the steered molecular dynamics. These findings will provide fundamental insights into the motion of nanodevices on a solid surface due to thermophoresis, and will offer the novel view for manipulating nanoscale particles on a solid surface in techniques such as cell separation, water purification, and chemical extraction. read less USED (high confidence) P. Sule, M. SzendrHo, C. Hwang, and L. Tapaszt’o, “Rotation misorientated graphene moire superlattices on Cu(111): classical molecular dynamics simulations and scanning tunneling microscopy studies,” Carbon. 2014. link Times cited: 37 USED (high confidence) Y. Dong, “Effects of substrate roughness and electron–phonon coupling on thickness-dependent friction of graphene,” Journal of Physics D: Applied Physics. 2014. link Times cited: 56 Abstract: Molecular dynamics simulation and the two-temperature method… read moreAbstract: Molecular dynamics simulation and the two-temperature method are carried out to model the effects of substrate roughness as well as electron–phonon coupling on thickness-dependent friction on graphene. It is found that substrate roughness can significantly enhance friction of graphene, which is orders of magnitude larger than that on smooth substrate due to puckering effect. Additionally, the adhesive force between graphene and substrate plays opposite roles for smooth and rough substrates. While on a smooth substrate, a larger adhesion hinders the wrinkle formation in graphene, therefore suppressing friction, on a rough substrate, adhesion helps induce atomic roughness in graphene and leads to friction enhancement. We also incorporate electron–phonon coupling into the atomistic modelling through a two-temperature method, and discover that its effect on friction is very small compared to that of roughness. read less USED (high confidence) L. Xu, N. Wei, and Y. Zheng, “Mechanical properties of highly defective graphene: from brittle rupture to ductile fracture,” Nanotechnology. 2013. link Times cited: 76 Abstract: Defects are generally believed to deteriorate the superlativ… read moreAbstract: Defects are generally believed to deteriorate the superlative performance of graphene-based devices but may also be useful when carefully engineered to tailor the local properties and achieve new functionalities. Central to most defect-associated applications is the defect coverage and arrangement. In this work, we investigate, by molecular dynamics simulations, the mechanical properties and fracture dynamics of graphene sheets with randomly distributed vacancies or Stone–Wales defects under tensile deformations over a wide defect coverage range. With defects presented, an sp–sp2 bonding network and an sp–sp2–sp3 bonding network are observed in vacancy-defected and Stone–Wales-defected graphene, respectively. The ultimate strength degrades gradually with increasing defect coverage and saturates in the high-ratio regime, whereas the fracture strain presents an unusual descending–saturating–improving trend. In the dense vacancy defect situation, the fracture becomes more plastic and super-ductility is observed. Further fracture dynamics analysis reveals that the crack trapping by sp–sp2 and sp–sp2–sp3 rings and the crack-tip blunting account for the ductile fracture, whereas geometric rearrangement on the entire sheet for vacancy defects and geometric rearrangement on the specific defect sites for Stone–Wales defects account for their distinctive rules of the evolution of the fracture strain. read less USED (high confidence) M. Yan et al., “Nanowire templated semihollow bicontinuous graphene scrolls: designed construction, mechanism, and enhanced energy storage performance.,” Journal of the American Chemical Society. 2013. link Times cited: 175 Abstract: Graphene scrolls have been widely investigated for applicati… read moreAbstract: Graphene scrolls have been widely investigated for applications in electronics, sensors, energy storage, etc. However, graphene scrolls with tens of micrometers in length and with other materials in their cavities have not been obtained. Here nanowire templated semihollow bicontinuous graphene scroll architecture is designed and constructed through "oriented assembly" and "self-scroll" strategy. These obtained nanowire templated graphene scrolls can achieve over 30 μm in length with interior cavities between the nanowire and scroll. It is demonstrated through experiments and molecular dynamic simulations that the semihollow bicontinuous structure construction processes depend on the systemic energy, the curvature of nanowires, and the reaction time. Lithium batteries based on V3O7 nanowire templated graphene scrolls (VGSs) exhibit an optimal performance with specific capacity of 321 mAh/g at 100 mA/g and 87.3% capacity retention after 400 cycles at 2000 mA/g. The VGS also shows a high conductivity of 1056 S/m and high capacity of 162 mAh/g at a large density of 3000 mA/g with only 5 wt % graphene added which are 27 and 4.5 times as high as those of V3O7 nanowires, respectively. A supercapacitor made of MnO2 nanowire templated graphene scrolls (MGSs) also shows a high capacity of 317 F/g at 1A/g, which is over 1.5 times than that of MnO2 nanowires without graphene scrolls. These excellent energy storage capacities and cycling performance are attributed to the unique structure of the nanowire templated graphene scroll, which provides continuous electron and ion transfer channels and space for free volume expansion of nanowires during cycling. This strategy and understanding can be used to synthesize other nanowire templated graphene scroll architectures, which can be extended to other fabrication processes and fields. read less USED (high confidence) R. Paruch, B. Garrison, and Z. Postawa, “Computed molecular depth profile for C60 bombardment of a molecular solid.,” Analytical chemistry. 2013. link Times cited: 10 Abstract: Molecular dynamics (MD) simulations have been performed for … read moreAbstract: Molecular dynamics (MD) simulations have been performed for 10 keV C60 bombardment of an octane molecular solid at normal incidence. The results are analyzed using the steady-state statistical sputtering model (SS-SSM) to understand the nature of molecular motions and to predict a depth profile of a δ-layer. The octane system has sputtering yield of ~150 nm(3) of which 85% is in intact molecules and 15% is fragmented species. The main displacement mechanism is along the crater edge. Displacements between layers beneath the impact point are difficult because the nonspherically shaped octane molecule needs a relatively large volume to move into and the molecule needs to be aligned properly for the displacement. Since interlayer mixing is difficult, the predicted depth profile is dominated by the rms roughness and the large information depth because of the large sputtering yield. read less USED (high confidence) Y. Sun, H. Yuehua, T. Hu, K. Xu, and P. Chu, “Effects of loading mode and orientation on deformation mechanism of graphene nano-ribbons,” Applied Physics Letters. 2013. link Times cited: 5 Abstract: Molecular dynamics simulation is performed to analyze the de… read moreAbstract: Molecular dynamics simulation is performed to analyze the deformation mechanism of graphene nanoribbons. When the load is applied along the zigzag orientation, tensile stress yields brittle fracture and compressive stress results in lattice shearing and hexagonal-to-orthorhombic phase transformation. Along the armchair direction, tensile stress produces lattice shearing and phase transformation, but compressive stress leads to a large bonding force. The phase transformation induced by lattice shearing is reversible for 17% and 30% strain in compressive loading along the zigzag direction and tensile loading along the armchair direction. The energy dissipation is less than 10% and resulting pseudo-elasticity enhances the ductility. read less USED (high confidence) H. Chen and S. Chen, “The peeling behaviour of a graphene sheet on a nano-scale corrugated surface,” Journal of Physics D: Applied Physics. 2013. link Times cited: 13 Abstract: The peeling process and average peeling force of a graphene … read moreAbstract: The peeling process and average peeling force of a graphene (GE) sheet on a corrugated surface are investigated using molecular dynamics simulation. It is found that the peeling behaviour varies with the substrate surface roughness and the peeling angle. Three kinds of typically peeling behaviours include (a) GE sheet directly passing the valley of the substrate roughness; (b) bouncing off from the substrate; and (c) continuously peeling off similarly to that on a flat substrate. As a result, the average peeling force is strongly dependent of the peeling behaviours. Furthermore, some interesting phenomena are caught, such as partial detaching and partial sliding of GE sheet in the valley of the substrate roughness, which are mainly due to the effects of pre-tension in GE sheet and the reduction of friction resistance. The results in this paper should be useful for the design of nano-film/substrate systems. read less USED (high confidence) Y. Long et al., “On the molecular origin of high-pressure effects in nanoconfinement: the role of surface chemistry and roughness.,” The Journal of chemical physics. 2013. link Times cited: 56 Abstract: Experiments and simulations both suggest that the pressure e… read moreAbstract: Experiments and simulations both suggest that the pressure experienced by an adsorbed phase confined within a carbon nanoporous material can be several orders of magnitude larger than the bulk phase pressure in equilibrium with the system. To investigate this pressure enhancement, we report a molecular-simulation study of the pressure tensor of argon confined in slit-shaped nanopores with walls of various models, including carbon and silica materials. We show that the pressure is strongly enhanced by confinement, arising from the effect of strongly attractive wall forces; confinement within purely repulsive walls does not lead to such enhanced pressures. Simulations with both the Lennard-Jones and Barker-Fisher-Watts intermolecular potentials for argon-argon interactions give rise to similar results. We also show that an increase in the wall roughness significantly decreases the in-pore pressure due to its influence on the structure of the adsorbate. Finally, we demonstrate that the pressures calculated from the mechanical (direct pressure tensor calculations) and the thermodynamic (volume perturbation method) routes yield almost identical results, suggesting that both methods can be used to calculate the local pressure tensor components in the case of these planar geometries. read less USED (high confidence) A. Volkov, R. N. Salaway, and L. Zhigilei, “Atomistic simulations, mesoscopic modeling, and theoretical analysis of thermal conductivity of bundles composed of carbon nanotubes,” Journal of Applied Physics. 2013. link Times cited: 39 Abstract: The propensity of carbon nanotubes (CNTs) to self-organize i… read moreAbstract: The propensity of carbon nanotubes (CNTs) to self-organize into continuous networks of bundles has direct implications for thermal transport properties of CNT network materials and defines the importance of clear understanding of the mechanisms and scaling laws governing the heat transfer within the primary building blocks of the network structures—close-packed bundles of CNTs. A comprehensive study of the thermal conductivity of CNT bundles is performed with a combination of non-equilibrium molecular dynamics (MD) simulations of heat transfer between adjacent CNTs and the intrinsic conductivity of CNTs in a bundle with a theoretical analysis that reveals the connections between the structure and thermal transport properties of CNT bundles. The results of MD simulations of heat transfer in CNT bundles consisting of up to 7 CNTs suggest that, contrary to the widespread notion of strongly reduced conductivity of CNTs in bundles, van der Waals interactions between defect-free well-aligned CNTs in a bundle have negligible effect on the intrinsic conductivity of the CNTs. The simulations of inter-tube heat conduction performed for partially overlapping parallel CNTs indicate that the conductance through the overlap region is proportional to the length of the overlap for CNTs and CNT-CNT overlaps longer than several tens of nm. Based on the predictions of the MD simulations, a mesoscopic-level model is developed and applied for theoretical analysis and numerical modeling of heat transfer in bundles consisting of CNTs with infinitely large and finite intrinsic thermal conductivities. The general scaling laws predicting the quadratic dependence of the bundle conductivity on the length of individual CNTs in the case when the thermal transport is controlled by the inter-tube conductance and the independence of the CNT length in another limiting case when the intrinsic conductivity of CNTs plays the dominant role are derived. An application of the scaling laws to bundles of single-walled (10,10) CNTs reveals that the transition from inter-tube-conductance-dominated to intrinsic-conductivity-dominated thermal transport in CNT bundles occurs in a practically important range of CNT length from ∼20 nm to ∼4 μm. read less USED (high confidence) P. Yang et al., “Thermal management performance of bent graphene nanoribbons,” RSC Advances. 2013. link Times cited: 21 Abstract: The models of graphene nanoribbons (GNRs) with angles 0°, 30… read moreAbstract: The models of graphene nanoribbons (GNRs) with angles 0°, 30°, 60°, 90° and 120° were constructed to investigate the thermal conduction by using the reverse non-equilibrium molecular dynamics method. A substantially negative correlation between the thermal conductivity and the bent angle shows a nonlinear decline from 0° to 90°. It also shows that there is a little increase from 90° to 120° due to the edge effect. To weaken the edge effect, the nitrogen doping method is adopted to recompose the bent GNRs. The results show that it is effective for the thermal management, and a strict monotonous relationship between the thermal conductivity and bent angle can be obtained. In the meantime, an interesting phenomenon is observed that the GNRs with edge modification by N-doping can get a much better thermal conduction than original GNRs without edge modification. We can understand the physical mechanism by phonon analysis for these GNRs. The investigation implies that we can change the thermal conductivity of GNRs by design by N-doping. read less USED (high confidence) D. Midtvedt, A. Croy, A. Isacsson, Z. Qi, and H. S. Park, “Fermi-Pasta-Ulam physics with nanomechanical graphene resonators: intrinsic relaxation and thermalization from flexural mode coupling.,” Physical review letters. 2013. link Times cited: 34 Abstract: Thermalization in nonlinear systems is a central concept in … read moreAbstract: Thermalization in nonlinear systems is a central concept in statistical mechanics and has been extensively studied theoretically since the seminal work of Fermi, Pasta, and Ulam. Using molecular dynamics and continuum modeling of a ring-down setup, we show that thermalization due to nonlinear mode coupling intrinsically limits the quality factor of nanomechanical graphene drums and turns them into potential test beds for Fermi-Pasta-Ulam physics. We find the thermalization rate Γ to be independent of radius and scaling as Γ∼T*/εpre2, where T* and εpre are effective resonator temperature and prestrain. read less USED (high confidence) Y. Li, D. Datta, Z. Li, and V. Shenoy, “Mechanical properties of hydrogen functionalized graphene allotropes,” Computational Materials Science. 2013. link Times cited: 42 USED (high confidence) Y. Zhang, Q. Pei, C. Wang, Y. Cheng, and Y. Zhang, “A molecular dynamics investigation on mechanical properties of hydrogenated graphynes,” Journal of Applied Physics. 2013. link Times cited: 25 Abstract: Graphyne, a new type of carbon allotropes, has attracted con… read moreAbstract: Graphyne, a new type of carbon allotropes, has attracted considerable attention in recent years. Using molecular dynamics simulations, we investigate the mechanical properties of four different graphynes (α-, β-, γ-, and 6,6,12-graphynes) functionalized with hydrogen. The simulations results show that hydrogenation can greatly deteriorate the mechanical properties of the graphynes. For the different graphynes with 100% H-coverage, the reduction in fracture stress depends on the percentage of acetylenic linkages in the graphyne structures: The more the acetylenic linkages, the larger the reduction. For the same graphyne, the reduction in fracture stress depends on the hydrogenation location, distribution, and coverage. Hydrogenation on the acetylenic linkages causes a larger reduction in fracture stress than that on the hexagonal rings. A line hydrogenation perpendicular to the tensile direction leads to a larger reduction in fracture stress than that when the line hydrogenation is parallel to the tensile direction. For random hydrogenation, the fracture stress and Young's modulus decrease rapidly at low H-coverage (<10%), and then level off with increasing coverage. The reduction in the mechanical properties due to hydrogenation is found to be related to the formation of weakened out-of-plane C-C bonds, which leads to earlier breaking of those bonds and subsequent fracture of the graphynes. The present study not only offers an in-depth understanding in the mechanical properties of hydrogenated graphynes and their fracture mechanisms but it also presents an important database for the design and practical applications of hydrogenated graphynes. read less USED (high confidence) C. Isborn, C. Tang, A. Martini, E. Johnson, A. Otero-de-la-Roza, and V. Tung, “Carbon Nanotube Chirality Determines Efficiency of Electron Transfer to Fullerene in All-Carbon Photovoltaics,” Journal of Physical Chemistry Letters. 2013. link Times cited: 42 Abstract: Nanocarbon-based photovoltaics offer a promising new archite… read moreAbstract: Nanocarbon-based photovoltaics offer a promising new architecture for the next generation of solar cells. We demonstrate that a key factor determining the efficiency of single-walled carbon nanotube (SWCNT)/fullerene devices is the chirality of the SWCNT. This is shown via current density vs voltage measurements of nanocarbon devices prepared with (9,7), (7,6) and (6,5) SWCNTs, as well as density-functional theory (DFT) density of states calculations of C60 adsorbed onto the corresponding SWCNTs. The trends in efficiency are rationalized in terms of the relative energies of the fullerene and SWCNT conduction band energy levels. read less USED (high confidence) X. Liu, F. Wang, and H. Wu, “Anisotropic propagation and upper frequency limitation of terahertz waves in graphene,” Applied Physics Letters. 2013. link Times cited: 19 Abstract: Transverse wave propagation in single-layer graphene sheet (… read moreAbstract: Transverse wave propagation in single-layer graphene sheet (SLGS) is studied via molecular dynamics simulation, continuum, and non-continuum analysis. We found that the propagation of transverse waves with frequency over 3 THz is remarkably chirality-dependent. Furthermore, the wave propagation in zigzag direction remains undistorted only when the frequency is below 16 THz, while this threshold is 10 THz in the armchair direction. The minimum permissible wavelength is proposed to explain the frequency limitation due to non-continuity. Our findings lead to an improved fundamental understanding on the vibration of graphene-based nanodevices and have potential applications in design and fabrication of nanoelectromechanical systems. read less USED (high confidence) M. Wang et al., “Molecular Dynamics Simulation of Fracture Strength and Morphology of Defective Graphene,” Journal of Nano Research. 2013. link Times cited: 1 Abstract: Different types of defects can be introduced into graphene d… read moreAbstract: Different types of defects can be introduced into graphene during material synthesis, and significantly influence the properties of graphene. In this work, we investigated the effects of structural defects, edge functionalisation and reconstruction on the fracture strength and morphology of graphene by molecular dynamics simulations. The minimum energy path analysis was conducted to investigate the formation of Stone-Wales defects. We also employed out-of-plane perturbation and energy minimization principle to study the possible morphology of graphene nanoribbons with edge-termination. Our numerical results show that the fracture strength of graphene is dependent on defects and environmental temperature. However, pre-existing defects may be healed, resulting in strength recovery. Edge functionalization can induce compressive stress and ripples in the edge areas of graphene nanoribbons. On the other hand, edge reconstruction contributed to the tensile stress and curved shape in the graphene nanoribbons. read less USED (high confidence) K. Kunal and N. Aluru, “Intrinsic loss due to unstable modes in graphene,” Nanotechnology. 2013. link Times cited: 6 Abstract: The mechanism of dissipation operative at the nanoscale rema… read moreAbstract: The mechanism of dissipation operative at the nanoscale remains poorly understood for most cases. In this work, using molecular dynamics simulations, we show that the unstable out-of-plane mode leads to the absorption of energy from the in-plane motion in graphene. The in-plane vibration modulates the potential energy profile for the out-of-plane modes. For the fundamental out-of-plane mode in the loading direction, the minimum of the potential energy shifts because of in-plane compressive strain. The structure takes a finite amount of time to relax to the new potential energy configuration. A hysteresis in the out-of-plane dynamics is observed when the time period of in-plane excitation becomes comparable to the time required for this relaxation. Increasing the stiffness of the out-of-plane modes by giving an initial tensile strain leads to a considerable decrease in dissipation rate. read less USED (high confidence) B. Liu, J. Baimova, S. Dmitriev, X. Wang, H. Zhu, and K. Zhou, “Discrete breathers in hydrogenated graphene,” Journal of Physics D: Applied Physics. 2013. link Times cited: 64 Abstract: Discrete breathers (DBs) in graphane (fully hydrogenated gra… read moreAbstract: Discrete breathers (DBs) in graphane (fully hydrogenated graphene) are investigated using molecular dynamics simulations. It is found that the DB can be excited by applying an out-of-plane displacement on a single hydrogen atom of graphane. The vibration frequency of the DB lies either within the gap of the phonon spectrum of graphane or beyond its upper spectrum bound. Both soft and hard types of anharmonicity of the DB, which have not been found in the same system, are observed in graphane. The study shows that the DB is robust and its lifetime is affected by various factors including its anharmonicity type, its amplitude and frequency, and the force on the hydrogen atom that forms it, whose competition results in a complex mechanism for the lifetime determination. The investigation of the maximum kinetic energy of DBs reveals that they may function to activate or accelerate dehydrogenation of hydrogenated graphene at high temperatures. read less USED (high confidence) P. Egberts, Z. Ye, X. Z. Liu, Y. Dong, A. Martini, and R. Carpick, “Environmental dependence of atomic-scale friction at graphite surface steps,” Physical Review B. 2013. link Times cited: 68 Abstract: (Received 24 January 2013; revised manuscript received 14 Ju… read moreAbstract: (Received 24 January 2013; revised manuscript received 14 June 2013; published 3 July 2013)Atomic force microscopy experiments and molecular dynamics simulations show that friction between ananoscale tip and atomically stepped surfaces of graphite is influenced by the environment. The presence of asmall amount of water increases friction at atomic steps, but does not strongly influence friction on flat terraces.DOI: 10.1103/PhysRevB.88.035409 PACS number(s): 68 read less USED (high confidence) M. Wang, C. Yan, L. Ma, N. Hu, and G.-P. Zhang, “Numerical analysis of shape transition in graphene nanoribbons,” Computational Materials Science. 2013. link Times cited: 5 USED (high confidence) Y. Huang and T. Li, “Molecular Mass Transportation Via Carbon Nanoscrolls,” Journal of Applied Mechanics. 2013. link Times cited: 18 Abstract: The open topology of a carbon nanoscroll (CNS) inspires pote… read moreAbstract: The open topology of a carbon nanoscroll (CNS) inspires potential applications such as high capacity hydrogen storage. Enthusiasm for this promising application aside, one crucial problem that remains largely unexplored is how to shuttle the hydrogen molecules adsorbed inside CNSs. Using molecular dynamics simulations, we demonstrate two effective transportation mechanisms of hydrogen molecules enabled by the torsional buckling instability of a CNS and the surface energy induced radial shrinkage of a CNS. As these two mechanisms essentially rely on the nonbonded interactions between the hydrogen molecules and the CNS, it is expected that similar mechanisms could be applicable to the transportation of molecular mass of other types, such as water molecules, deoxyribonucleic acids (DNAs), fullerenes, and nanoparticles. read less USED (high confidence) Y. Cheng, N. Pugno, X. Shi, B. Chen, and H. Gao, “Surface Energy-Controlled Self-Collapse of Carbon Nanotube Bundles With Large and Reversible Volumetric Deformation,” Journal of Applied Mechanics. 2013. link Times cited: 6 Abstract: Molecular dynamics simulations are performed to investigate … read moreAbstract: Molecular dynamics simulations are performed to investigate the effect of surface energy on equilibrium configurations and self-collapse of carbon nanotube bundles. It is shown that large and reversible volumetric deformation of such bundles can be achieved by tuning the surface energy of the system through an applied electric field. The dependence of the bundle volume on surface energy, bundle radius, and nanotube radius is discussed via a dimensional analysis and determined quantitatively using the simulation results. The study demonstrates potential of carbon nanotubes for applications in nanodevices where large, reversible, and controllable volumetric deformations are desired. read less USED (high confidence) X.-Y. Li, L. Li, Y. Wang, H. Li, and X. Bian, “Wetting and Interfacial Properties of Water on the Defective Graphene,” Journal of Physical Chemistry C. 2013. link Times cited: 44 Abstract: The wettability of defective graphene and its relation with … read moreAbstract: The wettability of defective graphene and its relation with the interfacial property of water have not been well tackled. By conducting molecular dynamics simulations on the interactions between water and graphene with some vacancy defects, we show that the contact angle is more sensitive to the Stone–Wales (SW) and single-vacancy (SV) defects than the double-vacancy (DV) defects. Density profiles indicate that the graphene sheet induces the interfacial water to change from a liquid into an ordered three-layer structure, which restricts the self-diffusion of water molecules seriously. Moreover, the effect of defects on the ordered liquid layer has also been discussed. Our results are helpful for controlling the wettability of graphene and developing the applications of graphene in nanodevices. read less USED (high confidence) M. Luisier et al., “Investigation of ripple-limited low-field mobility in large-scale graphene nanoribbons,” Applied Physics Letters. 2013. link Times cited: 3 Abstract: Combining molecular dynamics and quantum transport simulatio… read moreAbstract: Combining molecular dynamics and quantum transport simulations, we study the degradation of mobility in graphene nanoribbons caused by substrate-induced ripples. First, the atom coordinates of large-scale structures are relaxed such that surface properties are consistent with those of graphene on a substrate. Then, the electron current and low-field mobility of the resulting non-flat nanoribbons are calculated within the Non-equilibrium Green's Function formalism in the coherent transport limit. An accurate tight-binding basis coupling the σ- and π-bands of graphene is used for this purpose. It is found that the presence of ripples decreases the mobility of graphene nanoribbons on SiO2 below 3000 cm2/Vs, which is comparable to experimentally reported values. read less USED (high confidence) Y. Jhon, P. Chung, R. Smith, K. Min, G. Yeom, and M. Jhon, “Grain boundaries orientation effects on tensile mechanics of polycrystalline graphene,” RSC Advances. 2013. link Times cited: 25 Abstract: Molecular dynamics simulations were performed to investigate… read moreAbstract: Molecular dynamics simulations were performed to investigate how the orientation of grain boundary (GB) affects the tensile mechanics of polycrystalline graphene, where two opposite GB groups, i.e., armchair (AC) and zigzag (ZZ)-oriented tilted GBs were considered for the anisotropic study. We found very close mechanical similarities between the two groups in misorientation angle effect and critical bond length effect to determine the tensile strength. Mono-atomic carbon chains (MACCs) were commonly generated at tensile failure in both groups, as bridged between fractured sections, yielding the considerably higher population density and achievable length (4.51 nm−2 and 1.47 nm, maximally) compared to pristine graphene. Notably, we found that polycrystalline graphene exhibited distinctly different behaviors in this MACC production depending on GB orientation, being 1.2–3.0 times denser and 1.6–5.0 times longer for ZZ-oriented GBs. Atomic stress analyses indicated that all key reactions emerging before tensile failure would not be affected by the GB orientation of polycrystalline graphene since the reactions only occurred along GBs, explaining why anisotropic mechanical GB response has not been observed so far, in contrast to the MACC dynamics occurring after tensile failure. read less USED (high confidence) X. Wu, H. Zhao, M. Zhong, H. Murakawa, and M. Tsukamoto, “The Formation of Molecular Junctions between Graphene Sheets,” Materials Transactions. 2013. link Times cited: 8 Abstract: Based on molecular dynamics simulations, the formation possi… read moreAbstract: Based on molecular dynamics simulations, the formation possibility of molecular junctions between two tailored graphene sheets under ultrafast laser irradiation was investigated. It was found that single layer graphene sheet can survive under significantly high intensity of laser beam. The fluctuations of graphene sheets in the plane and out of plane under laser irradiation provided the “driving power” for the possible joining process. The relative position of two graphene sheets can influence the joining difficulties and this influence was found to be attributed to the dangling bonds of edges. The saturation of dangling bonds can prompt the self-assembly of carbon networks in the joining area and lead to the connection of two graphene sheets. [doi:10.2320/matertrans.MD201213] read less USED (high confidence) J. Wu and Y. Wei, “Grain misorientation and grain-boundary rotation dependent mechanical properties in polycrystalline graphene,” Journal of The Mechanics and Physics of Solids. 2013. link Times cited: 106 USED (high confidence) A. P. Paz, J. M. García‐Lastra, T. Markussen, K. Thygesen, and Á. Rubio, “Carbon nanotubes as heat dissipaters in microelectronics,” The European Physical Journal B. 2013. link Times cited: 2 USED (high confidence) S. Kiselev and E. V. Zhirov, “Molecular dynamics simulation of deformation and fracture of graphene under uniaxial tension,” Physical Mesomechanics. 2013. link Times cited: 16 USED (high confidence) H. Chen, Y. Yao, and S. Chen, “Adhesive contact between a graphene sheet and a nano-scale corrugated surface,” Journal of Physics D: Applied Physics. 2013. link Times cited: 22 Abstract: Adhesive contacts between graphene sheets and corrugated sur… read moreAbstract: Adhesive contacts between graphene sheets and corrugated surfaces are investigated. It is found that the final configuration between the graphene sheet and the substrate depends not only on the surface roughness of the substrate, but also on the length of graphene. A continuous transition, rather than a recent observation of ‘snap-through’ transition, is exhibited in our study. For a graphene sheet with a fixed length, it is easy to fully conform to the substrate of small roughness. Otherwise, the graphene sheet will remain flat on top of the corrugated substrate due to the unsatisfied bending energy or partially conform to the substrate due to the resistance of large interface friction. In order to reduce the effect of interface friction on the adhesive configuration, a new method, i.e. tilting the graphene sheet with a proper angle, is proposed. The tilting angle will significantly influence the final conformation of the adhesive interface. Some interesting types of behaviour are observed, such as rolling graphene, a double layer of graphene and fully adhesive contact, which is physically determined by the competition of thermal fluctuation and interfacial van der Waals interaction. read less USED (high confidence) Y. He, H. Li, Y. Li, K. Zhang, Y. Jiang, and X. Bian, “Atomic insight into copper nanostructures nucleation on bending graphene.,” Physical chemistry chemical physics : PCCP. 2013. link Times cited: 12 Abstract: Some findings in heterogeneous nucleation that the structura… read moreAbstract: Some findings in heterogeneous nucleation that the structural features of a growing crystal are usually inherited from the heterogeneous nucleus, although attracting more and more attention, are not yet well understood. Here we report numerical simulations of copper nucleation on bending graphene (BG) to explore the microscopic details of how the curved surface influences the freezing structure of the liquid metal. The simulation result clearly shows that copper atoms become layered at the solid-liquid interface in a "C"-shaped pattern resembling the BG. This kind of shape control decays with increasing distance from the wall and the outmost layers transform into twin crystal composed of two fcc wedges. It is found that the final structures have striking correlations with the curvature radius, central angle and arc length of the BG. Our study would provide an opportunity for comprehensive and satisfactory understanding of the heterogeneous nucleation on curved surfaces. read less USED (high confidence) B. Czerwinski, Z. Postawa, B. Garrison, and A. Delcorte, “Molecular dynamics study of polystyrene bond-breaking and crosslinking under C60 and Arn cluster bombardment,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2013. link Times cited: 20 USED (high confidence) H. Peng, G. Yuan-wen, and Z. Youhe, “The effect of electric charge on the mechanical properties of graphene,” Science China-physics Mechanics & Astronomy. 2013. link Times cited: 5 USED (high confidence) P. Hao, Y. Gao, and Y. Zhou, “The effect of electric charge on the mechanical properties of graphene,” Science China Physics, Mechanics and Astronomy. 2013. link Times cited: 0 USED (high confidence) C. Wang, Y. Liu, L. Lan, and H. Tan, “Graphene wrinkling: formation, evolution and collapse.,” Nanoscale. 2013. link Times cited: 87 Abstract: In this paper we focus on the studies of graphene wrinkling,… read moreAbstract: In this paper we focus on the studies of graphene wrinkling, from its formation to collapse, and its dependence on aspect ratio and temperature using molecule dynamics simulation. Based on our results, the first wrinkle is not formed on the edge but in the interior of graphene. The fluctuations of edge slack warps drive the wrinkling evolution in graphene which is distinguished from the bifurcation in continuum film. There are several obvious stages in wrinkling progress, including incubation, infancy, youth, maturity and gerontism periods which are identified by the atomic displacement difference due to the occurrences of new wrinkles. The wrinkling progress is over when the C-C bonds in highly stretched corners are broken which contributes to the wrinkling collapse. The critical wrinkling strain, the wrinkling pattern and extent depend on the aspect ratio of graphene, the wrinkling level and collapsed strains do not. Only the collapsed strain is sensitive to the temperature, the other wrinkling parameters are independent of the temperature. Our results would benefit the understanding of the physics of graphene wrinkling and the design of nanomechanical devices by tuning the wrinkles. read less USED (high confidence) Ó. Restrepo, X. Gonze, P. Bertrand, and A. Delcorte, “Computer simulations of cluster impacts: effects of the atomic masses of the projectile and target.,” Physical chemistry chemical physics : PCCP. 2013. link Times cited: 7 Abstract: Cluster secondary ion mass spectrometry is now widely used f… read moreAbstract: Cluster secondary ion mass spectrometry is now widely used for the characterization of nanostructures. In order to gain a better understanding of the physics of keV cluster bombardment of surfaces and nanoparticles (NPs), the effects of the atomic masses of the projectile and of the target on the energy deposition and induced sputtering have been studied by means of molecular dynamics simulations. 10 keV C60 was used as a model projectile and impacts on both a flat polymer surface and a metal NP were analyzed. In the first case, the mass of the impinging carbon atoms was artificially varied and, in the second case, the mass of the NP atoms was varied. The results can be rationalized on the basis of the different atomic mass ratios of the projectile and target. In general, the emission is at its maximum, when the projectile and target have the same atomic masses. In the case of the supported NP, the emission of the underlying organic material increases as the atomic mass of the NP decreases. However, it is always less than that calculated for the bare organic surface, irrespective of the mass ratio. The results obtained with C60 impacts on the flat polymer are also compared to simulations of C60 and monoatomic Ga impacts on the NP. read less USED (high confidence) N. Patra and H. Sadeghpour, “Dynamics of Synthesis of Large Carbon Structures in the Interstellar Medium,” Proceedings of the International Astronomical Union. 2013. link Times cited: 0 Abstract: We investigate the nucleation of carbon and hydrogen atoms i… read moreAbstract: We investigate the nucleation of carbon and hydrogen atoms in the gas phase to form large carbon chains, clusters and cages by reactive molecular dynamics simulations. We study how temperature, particle density, presence of hydrogen, and carbon inflow affect the nucleation of molecular moieties with different characteristics. read less USED (high confidence) E. Paek and G. Hwang, “A computational analysis of graphene adhesion on amorphous silica,” Journal of Applied Physics. 2013. link Times cited: 19 Abstract: We present a computational analysis of the morphology and ad… read moreAbstract: We present a computational analysis of the morphology and adhesion energy of graphene on the surface of amorphous silica (a-SiO2). The a-SiO2 model surfaces obtained from the continuous random network model-based Metropolis Monte Carlo approach show Gaussian-like height distributions with an average standard deviation of 2.91 ± 0.56 A, in good agreement with existing experimental measurements (1.68–3.7 A). Our calculations clearly demonstrate that the optimal adhesion between graphene and a-SiO2 occurs when the graphene sheet is slightly less corrugated than the underlying a-SiO2 surface. From morphology analysis based on fast Fourier transform, we find that graphene may not conform well to the relatively small jagged features of the a-SiO2 surface with wave lengths of smaller than 2 nm, although it generally exhibits high-fidelity conformation to a-SiO2 topographic features. For 18 independent samples, on average the van der Waals interaction at the graphene/a-SiO2 interface is predicted to vary from Evd... read less USED (high confidence) A. Stepanov, “On the role of structural defects during particle channeling through carbon nanotubes,” Journal of Surface Investigation. X-ray, Synchrotron and Neutron Techniques. 2013. link Times cited: 1 USED (high confidence) S. Hartmann, O. Holck, and B. Wunderle, “Molecular dynamics simulations for mechanical characterization of CNT/gold interface and its bonding strength,” 2013 14th International Conference on Thermal, Mechanical and Multi-Physics Simulation and Experiments in Microelectronics and Microsystems (EuroSimE). 2013. link Times cited: 5 Abstract: CNT/metal interfaces under mechanical loads are investigated… read moreAbstract: CNT/metal interfaces under mechanical loads are investigated using molecular dynamics by simulating pull-out tests of single walled carbon nanotubes (CNTs) emdedded in single crystal gold lattices. As a result of our simulations we present obtained force-displacement data. We investigated the influence of two different Lennard Jones (LJ) coefficients pairs, two CNT types and three lattice directions of the gold matrix with respect to the embedding direction. Additionally we incorporated structural defects into our model and report on their influence. The change of the CNT type leads to a change in the maximum pull-out force. Here we attribute this to the change in CNT diameter, where a bigger diameter entails an increased maximum pull-out force. Changing the LJ coefficient pair has a strong impact on the maximum pull-out forces, where a higher bonding energy results in a higher maximum pull-out force. Defects also show a positive effect on the maximum pull-out force. The presented results have impact on bonding strength of CNT/metal interfaces. read less USED (high confidence) A. Lherbier, S. Roche, Ó. Restrepo, Y. Niquet, A. Delcorte, and J. Charlier, “Highly defective graphene: A key prototype of two-dimensional Anderson insulators,” Nano Research. 2013. link Times cited: 51 USED (high confidence) Y. Dong, X. Z. Liu, P. Egberts, Z. Ye, R. Carpick, and A. Martini, “Correlation Between Probe Shape and Atomic Friction Peaks at Graphite Step Edges,” Tribology Letters. 2013. link Times cited: 44 USED (high confidence) M. Wang et al., “Molecular Dynamics Simulation of Fracture Strength and Morphology of Defective Graphene,” Journal of Nano Research. 2013. link Times cited: 7 Abstract: Different types of defects can be introduced into graphene d… read moreAbstract: Different types of defects can be introduced into graphene during material synthesis, and significantly influence the properties of graphene. In this work, we investigated the effects of structural defects, edge functionalisation and reconstruction on the fracture strength and morphology of graphene by molecular dynamics simulations. The minimum energy path analysis was conducted to investigate the formation of Stone-Wales defects. We also employed out-of-plane perturbation and energy minimization principle to study the possible morphology of graphene nanoribbons with edge-termination. Our numerical results show that the fracture strength of graphene is dependent on defects and environmental temperature. However, pre-existing defects may be healed, resulting in strength recovery. Edge functionalization can induce compressive stress and ripples in the edge areas of graphene nanoribbons. On the other hand, edge reconstruction contributed to the tensile stress and curved shape in the graphene nanoribbons. read less USED (high confidence) B. Czerwinski and A. Delcorte, “Molecular dynamics study of fullerite cross-linking under keV C 60 and Arn cluster bombardment,” Journal of Physical Chemistry C. 2013. link Times cited: 20 Abstract: Molecular dynamics computer simulations are used to elucidat… read moreAbstract: Molecular dynamics computer simulations are used to elucidate the cross-linking processes induced by 0.6-50 keV C60 and Arn cluster bombardment in a C60 fullerite solid sample. The obtained results indicate the presence of a "chemical effect" when C 60 projectile is used. Namely, the bombarding C60 delivers additional, highly reactive, radicals which interact with the atoms of the fullerite sample, increasing the efficiency of the cross-linking process. The omission of those interactions in the analysis makes the C60 very similar to the case of the Ar18 bombardment. For Arn cluster bombardment, the initial energy per atom in the projectile is the parameter which has the predominant influence on the cross-linking process. Furthermore, a relationship between the energy thresholds for fragmentation of the target molecules and cross-linking initiation and the size of the Ar clusters is observed. Both of these thresholds decrease with increasing size of the projectile. © 2013 American Chemical Society. read less USED (high confidence) T. Jacobs et al., “The Effect of Atomic-Scale Roughness on the Adhesion of Nanoscale Asperities: A Combined Simulation and Experimental Investigation,” Tribology Letters. 2013. link Times cited: 120 USED (high confidence) M. Wang, C. Yan, L. Ma, and N. Hu, “Molecular dynamics investigation on edge stress and shape transition in graphene nanoribbons,” Science & Engineering Faculty. 2013. link Times cited: 10 USED (high confidence) S. Zhu and T. Li, “Hydrogenation enabled scrolling of graphene,” Journal of Physics D: Applied Physics. 2013. link Times cited: 53 Abstract: Hydrogenation of graphene leads to local bond distortion of … read moreAbstract: Hydrogenation of graphene leads to local bond distortion of each hydrogenated carbon atom. Therefore, programmable hydrogenation of graphene can open up new pathways to controlling the morphology of graphene and therefore enable the exploration of graphene-based unconventional nanomaterials. Using molecular dynamics simulations, we show that single-sided hydrogenation can cause the scrolling of graphene. If a proper size of the graphene is hydrogenated on one side, the graphene can completely scroll up into a carbon nanoscroll (CNS) that remains stable at room temperature. We perform extensive simulations to delineate a diagram in which three types of scrolling behaviour of partially single-sided hydrogenated graphene are identified in the parameter space spanned by the hydrogenation size and the graphene size. Such a diagram can serve as quantitative guidelines that shed important light on a feasible solution to address the challenge of fabricating high-quality CNSs, whose open topology holds promise to enable novel nanodevices. read less USED (high confidence) A. Delcorte, C. LeBlanc, C. Poleunis, and K. Hamraoui, “Computer Simulations of the Sputtering of Metallic, Organic, and Metal−Organic Surfaces with Bin and C60 Projectiles,” Journal of Physical Chemistry C. 2013. link Times cited: 25 Abstract: This study focuses on the microscopic modeling of 0-25 keV B… read moreAbstract: This study focuses on the microscopic modeling of 0-25 keV Bi 1-3-5 and C60 cluster impacts on three different targets (Au crystal, adsorbed Au nanoparticle, and organic solid), using molecular dynamics simulations, and on the comparison of the calculated quantities with recent experimental results, reported in the literature or obtained in our laboratory. The sputtering statistics are reported, showing nonlinearity of the sputtering yields with the number of cluster atoms at the same incident velocity for Bi1-5 bombardment. They are compared to experiments (especially for the organic target), and the microscopic explanation of the observations is analyzed. The results show that the respective behaviors and performances of the different projectiles are strongly dependent on the target, with clusters of heavy Bi atoms being more efficient at sputtering gold and, conversely, fullerene clusters inducing the largest sputtering yields of the organic material (mass matching). For organic targets, some important and novel conclusions of this work are the following: (i) The increase of the sputtering yield when going from Bi atoms to Bi clusters is insufficient to explain the much larger increase of characteristic ion yields, suggesting a projectile-dependent ionization probability. (ii) The extent of molecular fragmentation follows the order of Bi > Bi3 > Bi5 > C60, that is, softer emission with larger clusters. (iii) Even 5-10 keV Bi atoms create collective molecular motions and craters in the polymeric solid, though the collision cascades are rather dilute. Finally, a second series of simulations performed at low energies predict that 0.1-1 keV Bin clusters should not provide better results for sputtering and depth profiling than isoenergetic single atoms. © 2013 American Chemical Society. read less USED (high confidence) L. Xu, N. Wei, X. Xu, Z. Fan, and Y. Zheng, “Defect-activated self-assembly of multilayered graphene paper: a mechanically robust architecture with high strength,” Journal of Materials Chemistry. 2013. link Times cited: 16 Abstract: In this work molecular dynamics simulations are carried out … read moreAbstract: In this work molecular dynamics simulations are carried out to investigate the defect-mediated self-assembly of graphene paper from several layers of graphene sheets with vacancy defects. Tensile and shear deformations are applied to the obtained architectures to investigate both the in-plane and the out-of-plane mechanical properties. The effect of incipient defect coverage is analyzed and super-ductility is observed in the high defect density situation. While the stiffness and strength decrease with the increasing of incipient defect coverage under in-plane deformations, they increase under out-of-plane deformations, which can be attributed to the enhanced defect-induced interlayer cross-linking. Effects of crack-like flaws are also investigated to demonstrate the robustness of this structure. Our results demonstrate that defects, which are sometimes unavoidable and undesirable, can be engineered in a favorable way to provide a new approach for graphene-based self-assembly of vertically aligned architectures with mechanical robustness and high strength. read less USED (high confidence) A. M. Brockway and J. Schrier, “Noble Gas Separation using PG-ESX (X=1,2,3) Nanoporous Two-dimensional Polymers,” Journal of Physical Chemistry C. 2013. link Times cited: 54 Abstract: Using planewave pseudopotential density functional theory an… read moreAbstract: Using planewave pseudopotential density functional theory and classical molecular dynamics simulations, we investigate the transport of noble gases through a family of two-dimensional hydrocarbon polymer membranes that generalize the “porous graphene” (PG) material synthesized by Bieri et al. by insertion of (E)-stilbene (ES) groups. We find that density functional theory overestimates the barrier height and empirical dispersion corrections underestimate the barrier height, compared to reference MP2/cc-pVTZ calculations on PG. The barrier height for noble gas transport is greatly reduced from PG to PG-ES1, but additional increases in the size of the pore in PG-ES2 and PG-ES3 lead to an attractive potential well instead of a repulsive barrier. Using the computed potential energy surfaces, we compute pressure- and temperature-driven tunneling probabilities of He isotopes, and refit an improved classical force-field. Using classical molecular dynamics simulations, we find that PG-ES1 has an He permeance of 6... read less USED (high confidence) Ó. Restrepo and A. Delcorte, “Argon cluster sputtering of a hybrid metal-organic surface: A microscopic view,” Journal of Physical Chemistry C. 2013. link Times cited: 11 Abstract: Argon clusters are increasingly used for organic mass spectr… read moreAbstract: Argon clusters are increasingly used for organic mass spectrometry and 3D imaging, but their interaction with complex samples is not well understood yet. In this study, the interaction of kiloelectronvolt argon cluster projectiles (Ar60–2000) with an organic crystal of polyethylene (PE) covered with gold nanoparticles (Au-NPs) is investigated by means of molecular dynamics simulations. The results are compared as a function of the impact point and also to previous simulations involving C60 and Au400 projectiles. According to the impact point, fragmentation of the polymer or the NP increases monotonically with the energy per atom in the projectile; i.e., the emission of fragments decreases monotonically with increasing cluster size at a given total energy. For impacts on the Au-NP, however, the sputtering yield of organic material exhibits a nonmonotonic dependence on the Ar cluster size, with a maximum for similar projectile and Au-NP sizes. At constant energy per atom, the emission of gold is additionall... read less USED (high confidence) Z. Postawa, R. Paruch, L. Rzeznik, and B. Garrison, “Dynamics of large Ar cluster bombardment of organic solids,” Surface and Interface Analysis. 2013. link Times cited: 39 Abstract: Molecular dynamics computer simulations are used to investig… read moreAbstract: Molecular dynamics computer simulations are used to investigate the ejection process of molecules from a benzene crystal bombarded with keV large Ar clusters. The effect of projectile size, the kinetic energy and the impact angle on the sputtering efficiency is investigated. The results show that although the sputtering yield depends on all projectile parameters, this dependence can be greatly simplified if the sputtering yield per projectile nucleon is expressed as a function of projectile kinetic energy per nucleon. A different dependence of the total sputtering yield on the impact angle has been observed for small and large projectiles. This effect is attributed to a ‘washing out’ mechanism. For large projectiles most of the organic molecules are ejected by gentle collective action of argon atoms. Proper selection of the projectile parameters allows for achieving conditions where only intact molecules are emitted. Copyright © 2012 John Wiley & Sons, Ltd. read less USED (high confidence) S. N. Schiffres, K. H. Kim, L. Hu, A. McGaughey, M. F. Islam, and J. Malen, “Gas Diffusion, Energy Transport, and Thermal Accommodation in Single‐Walled Carbon Nanotube Aerogels,” Advanced Functional Materials. 2012. link Times cited: 94 Abstract: The thermal conductivity of gas‐permeated single‐walled carb… read moreAbstract: The thermal conductivity of gas‐permeated single‐walled carbon nanotube (SWCNT) aerogel (8 kg m−3 density, 0.0061 volume fraction) is measured experimentally and modeled using mesoscale and atomistic simulations. Despite the high thermal conductivity of isolated SWCNTs, the thermal conductivity of the evacuated aerogel is 0.025 ± 0.010 W m−1 K−1 at a temperature of 300 K. This very low value is a result of the high porosity and the low interface thermal conductance at the tube–tube junctions (estimated as 12 pW K−1). Thermal conductivity measurements and analysis of the gas‐permeated aerogel (H2, He, Ne, N2, and Ar) show that gas molecules transport energy over length scales hundreds of times larger than the diameters of the pores in the aerogel. It is hypothesized that inefficient energy exchange between gas molecules and SWCNTs gives the permeating molecules a memory of their prior collisions. Low gas‐SWCNT accommodation coefficients predicted by molecular dynamics simulations support this hypothesis. Amplified energy transport length scales resulting from low gas accommodation are a general feature of CNT‐based nanoporous materials. read less USED (high confidence) K. A. Phillips, J. Palmer, and K. Gubbins, “Analysis of the solvation structure of rubidium bromide under nanoconfinement,” Molecular Simulation. 2012. link Times cited: 3 Abstract: We report results from a molecular simulation study of aqueo… read moreAbstract: We report results from a molecular simulation study of aqueous rubidium bromide solutions confined in slit-shaped carbon pores 6.5–16 Å in width, which encompasses the range typically found in nanoporous carbon electrode materials. For each slit-pore model, the structure of the solvation shells surrounding the Rb+ and Br− ions in 0.1, 0.5 and 1.0 M solutions was examined using the ion–water radial distribution functions. The impact of pore geometry on solvation structure of ions was also investigated using a disordered carbon model that morphologically resembles real nanoporous carbon electrodes. Monte Carlo simulations were used to determine the propensity of ions to reside in pores of specific sizes in the model carbon, allowing the solvation structure of Rb+ and Br− ions to be analysed as a function of pore size. We find that a dramatic drop in the solvation number occurs in pore sizes below 10 Å for slit-shaped pores, while more complex geometries see a steady decrease in solvation number as pore size is decreased. Our results suggest that, when compared to the disordered carbon model, the slit-pore model may not provide qualitatively accurate predictions regarding the structural properties of electrolytes confined in complex electrode materials. read less USED (high confidence) J. Polvi, P. Luukkonen, K. Nordlund, T. Järvi, T. W. Kemper, and S. Sinnott, “Primary radiation defect production in polyethylene and cellulose.,” The journal of physical chemistry. B. 2012. link Times cited: 18 Abstract: Irradiation effects in polyethylene and cellulose were exami… read moreAbstract: Irradiation effects in polyethylene and cellulose were examined using molecular dynamics simulations. The governing reactions in both materials were chain scissioning and generation of small hydrocarbon and peroxy radicals. Recombination of chain fragments and cross-linking between polymer chains were found to occur less frequently. Crystalline cellulose was found to be more resistant to radiation damage than crystalline polyethylene. Statistics on radical formation are presented and the dynamics of the formation of radiation damage discussed. read less USED (high confidence) J. Zhang, K. Du, F. Xu, T. Sun, and Y. Tang, “Effect of chain length on nanoscratching of polystyrene: a molecular dynamics study,” Other Conferences. 2012. link Times cited: 0 Abstract: In current study we perform molecular dynamics simulations o… read moreAbstract: In current study we perform molecular dynamics simulations of nanoscratching of amorphous polystyrene. The AIREBO potential is utilized to describe intermolecular and intramolecular interactions in simulated polystyrene system. In addition, the effect of chain length on the deformation behavior of polystyrene chains, force variation, and increment of temperature and potential energy is studied. Our simulations results demonstrate the permanent deformation of polystyrene during nanoscratching is governed by chain sliding and deformation of chain itself, i.e.. change in chain structure and rotation of phenyl group. There is strong chain length dependence of the mobility of the chain, which in turn affects deformation behavior of polystyrene and machining force. The influence of chain mobility on temperature and potential energy variations is also discussed. read less USED (high confidence) A. Khoshaman, P. C. H. Li, and B. Bahreyni, “High sensitivity, supramolecular thin films for sensing of methane,” 2012 IEEE Sensors. 2012. link Times cited: 0 Abstract: A method has been developed to obtain uniform thin layers of… read moreAbstract: A method has been developed to obtain uniform thin layers of the supramolecule cryptophane A (CrypA) on quartz crystals to produce high-sensitivity gravimetric methane gas sensors. Molecular mechanics and ab initio simulations were used for the first time to calculate the binding energy of methane to CrypA. The results justify the use of CrypA to selectively sense methane amongst a mixture of gases. CrypA molecules were synthesized by an improved 2-step trimerization method and characterized by 1H-NMR spectroscopy. The response of these sensors to different concentrations of methane was studied. The detection limit of 3ppm (i.e., 0.003%) with a sensitivity of 80mHz/ppm show significant improvement over the prior art. read less USED (high confidence) M. Reguzzoni, A. Fasolino, E. Molinari, and M. Righi, “Friction by shear deformations in multilayer graphene,” Journal of Physical Chemistry C. 2012. link Times cited: 49 Abstract: We present accurate calculations of friction in graphene fil… read moreAbstract: We present accurate calculations of friction in graphene films in configurations simulating the presence of an anchoring substrate. We find that a slider induces both out-of-plane and shear deformations, which increase with the thickness of the supported film. We elucidate the new frictional mechanism connected to shear layer motions, which is minimal for systems with the smallest number of layers. read less USED (high confidence) T. D. Nguyen et al., “Competition between collapse and breakup in nanometer-sized thin rings using molecular dynamics and continuum modeling.,” Langmuir : the ACS journal of surfaces and colloids. 2012. link Times cited: 27 Abstract: We consider nanometer-sized fluid annuli (rings) deposited o… read moreAbstract: We consider nanometer-sized fluid annuli (rings) deposited on a solid substrate and ask whether these rings break up into droplets due to the instability of Rayleigh-Plateau-type modified by the presence of the substrate, or collapse to a central drop due to the presence of azimuthal curvature. The analysis is carried out by a combination of atomistic molecular dynamics simulations and a continuum model based on a long-wave limit of Navier-Stokes equations. We find consistent results between the two approaches, and demonstrate characteristic dimension regimes which dictate the assembly dynamics. read less USED (high confidence) Z. Zhang, Y. Huang, and T. Li, “Buckling instability of carbon nanoscrolls,” Journal of Applied Physics. 2012. link Times cited: 28 Abstract: Formed by rolling up a monolayer graphene into a spiral stru… read moreAbstract: Formed by rolling up a monolayer graphene into a spiral structure, a carbon nanoscroll (CNS) is topologically open and has two free edges along its axial direction, distinct from a multi-walled carbon nanotube (MWCNT). Through systematic molecular mechanics simulations, we show that the unique structure of a CNS produces distinct features of its buckling instability under axial compression, twisting, and bending from those of a MWCNT. The results should be instrumental in future structural design of CNS-based applications. As an example, we demonstrate molecular mass transport through a CNS enabled by its torsional buckling instability. The understanding of reversible buckling instability of CNSs could potentially enable the design of novel nano-devices. read less USED (high confidence) W.-Q. Wu, M.-L. Tian, H.-Y. Chen, Q. Yuan, and D. Sun, “The structure of Lennard-Jones nanowires encapsulated by carbon nanotubes,” arXiv: Mesoscale and Nanoscale Physics. 2012. link Times cited: 0 Abstract: Molecular dynamics simulations have been used to investigate… read moreAbstract: Molecular dynamics simulations have been used to investigate the structures of Lennard-Jones (LJ) nanowires (NWs) encapsulated by carbon nanotubes (CNTs).
We found that, when the radius of CNTs is small, the structures of NWs are quite simple, {\it i.e,} only multishell NWs are formed. For CNTs with larger radius, the structure of NWs becomes much richer. In addition to crystal and multishell NWs, three new kinds of NWs are found, {\it i.e,} a hybrid NW with a crystal core coated by a few shells, a crystal NW with droplet-like pits on the side of NW, and a multishell NW with droplet-like pits on the side of NW.
The 'phase' diagram, which describes the structure change with the number of LJ atoms and the interaction between NWs and CNTs, is also obtained. read less USED (high confidence) L. Qi, Y. Mao, and J. Li, “Slip corona surrounding bilayer graphene nanopore.,” Nanoscale. 2012. link Times cited: 14 Abstract: The electronic and magnetic properties of bilayer graphene (… read moreAbstract: The electronic and magnetic properties of bilayer graphene (BLG) depend on the stacking order between the two layers. We introduce a new conceptual structure of "slip corona" on BLG, which is a transition region between A-A stacking close to a nanopore composed of bilayer edges (BLEs) and A-B stacking far away. For an extremely small nanopore (diameter D(pore) < ~5 nm), both atomistic simulations and a continuum model reach consistent descriptions on the shape and size of this "corona" (diameter ~50 nm), which is much larger than the width of the typical dislocation core (~1 nm) in 3D metals or the nanopore itself, due to the weak van der Waals interactions and low interlayer shear resistance between two adjacent layers of graphene. The continuum model also suggests that the width of this "corona" from the BLE to the A-B stacking area would increase as D(pore) increases and converge to ~40 nm when D(pore) is more than ~80 nm. This large stacking transition region provides a new avenue for tailoring BLG properties. read less USED (high confidence) M. Białoskórski and J. Rybicki, “Mechanical Properties of Single - walled Carbon Nanotubes Simulated with AIREBO Force - Field,” computational methods in science and technology. 2012. link Times cited: 7 Abstract: In this work we determined the mechanical properties (Young&… read moreAbstract: In this work we determined the mechanical properties (Young's modulus, Poisson's ratio, and shear modulus) of 400 single-walled carbon nanotubes of radii from 2.1; ((0, 5) nanotube) to 17.3 A ((0, 45) nanotube). All nanotubes were simulated with AIREBO forcefield. It turns out that zigzag nanotubes are mechanically more resistant than armchair nanotubes. read less USED (high confidence) T. Zhang, X. Li, S. Kadkhodaei, and H. Gao, “Flaw insensitive fracture in nanocrystalline graphene.,” Nano letters. 2012. link Times cited: 221 Abstract: We show from a series of molecular dynamics simulations that… read moreAbstract: We show from a series of molecular dynamics simulations that the tensile fracture behavior of a nanocrystalline graphene (nc-graphene) nanostrip can become insensitive to a pre-existing flaw (e.g., a hole or a notch) below a critical length scale in the sense that there exists no stress concentration near the flaw, the ultimate failure does not necessarily initiate at the flaw, and the normalized strength of the strip is independent of the size of the flaw. This study is a first direct atomistic simulation of flaw insensitive fracture in high-strength nanoscale materials and provides significant insights into the deformation and failure mechanisms of nc-graphene. read less USED (high confidence) Y. Jhon, S.-E. Zhu, J.-H. Ahn, and M. Jhon, “The mechanical responses of tilted and non-tilted grain boundaries in graphene,” Carbon. 2012. link Times cited: 75 USED (high confidence) H. Shang and W. Wang, “Hypervelocity impact properties of graphene armor via molecular dynamics simulations.” 2012. link Times cited: 4 Abstract: Hypervelocity impact properties of two different graphene ar… read moreAbstract: Hypervelocity impact properties of two different graphene armor systems are investigated using molecular dynamics simulations. One system is the so-called spaced armor which consists of a number of graphene plates spaced certain distance apart. Its response under normal impact of a spherical projectile is studied, focusing on the effect of the number of graphene monolayers per plate (denoted by n ) on the penetration resistance of the armor. We find that under normal impact by a spherical projectile the penetration resistance increases with decreasing number of monolayers per plate ( n ), and the best penetration resistance is achieved in the system with one graphene layer for each plate. Note that the monolayers in all the simulated multilayer graphene plates were AB-stacked. The second system being studied is the laminated copper/graphene composites with the graphene layers inside copper, on impact or back surface, or on both the impact and back surfaces. The simulation results show that under normal impact by a spherical projectile the laminated copper/graphene composite has much higher penetration resistance than the monolithic copper plate. The best efficiency is achieved when the graphene layers are on both the impact and back surfaces. read less USED (high confidence) Y. Sun, F. Ma, D. Ma, K. Xu, and P. Chu, “Stress-induced annihilation of Stone–Wales defects in graphene nanoribbons,” Journal of Physics D: Applied Physics. 2012. link Times cited: 38 Abstract: Stress arising from structural or thermal misfit impacts the… read moreAbstract: Stress arising from structural or thermal misfit impacts the reliability of graphene-related devices. The deformation behaviour of graphene nanoribbons (GNRs) with Stone–Wales defects under stress studied by molecular dynamics shows that nearly all the SW defects annihilate via inverse rotation of C–C bonds. The fracture stress of defective GNRs is comparable to that of perfect ones and similar to mechanical annealing observed from bulk metals. It is a competition between bond rotation and fracture and depends on the strain rate and temperature. At a lower strain rate, such as 10−5 ps−1, the rotation velocity of C–C bonds of 4.2 Å ps−1 is three orders of magnitude larger than the velocity of the collective movement of atoms (1.2 × 10−3 Å ps−1). There is enough time for the C–C bond rotation to respond to the external load, but it becomes more difficult at higher strain rates. This stress-induced SW defect annihilation can be enhanced at higher temperatures because of enhanced exchange of atomic momentum and energy. The results reveal the dominant influence of SW defects on the mechanical properties of two-dimensional materials. read less USED (high confidence) Y. Liang and Q. Han, “Prediction of nonlocal scale parameter for carbon nanotubes,” Science China Physics, Mechanics and Astronomy. 2012. link Times cited: 26 USED (high confidence) Y. Liang and Q. Han, “Prediction of nonlocal scale parameter for carbon nanotubes,” Science China Physics, Mechanics and Astronomy. 2012. link Times cited: 0 USED (high confidence) S. Zhao, J. Xue, Y. Wang, and S. Yan, “Effect of SiO2 substrate on the irradiation-assisted manipulation of supported graphene: a molecular dynamics study,” Nanotechnology. 2012. link Times cited: 49 Abstract: The irradiation effects in graphene supported by SiO2 substr… read moreAbstract: The irradiation effects in graphene supported by SiO2 substrate including defect production and implantation efficiency are investigated using the molecular dynamics (MD) method with empirical potentials. We show that the irradiation damage in supported graphene comes from two aspects: the direct damage induced by the incident ions and the indirect damage resulting from backscattered particles and sputtered atoms from the substrate. In contrast with the damage in suspended graphene, we find that the indirect damage is dominant in supported graphene at high energies. As a result, enhanced irradiation damage in supported graphene is observed when the incident energy is above 5 keV for Ar and 3 keV for Si. The direct damage probability at all energies, even the total damage probability at low energies, in supported graphene is always much lower than that in suspended graphene because of the higher threshold displacement energy of carbon atoms. In addition, we demonstrate the striking finding that it is possible to dope graphene with sputtered atoms from the substrate and the implantation probability is considerable at optimal energies. Our results indicate that the substrate is an important factor in the process of ion-irradiation-assisted engineering of the properties of graphene. read less USED (high confidence) X. Zhang, M. Hu, and D. Poulikakos, “A low-frequency wave motion mechanism enables efficient energy transport in carbon nanotubes at high heat fluxes.,” Nano letters. 2012. link Times cited: 41 Abstract: The great majority of investigations of thermal transport in… read moreAbstract: The great majority of investigations of thermal transport in carbon nanotubes (CNTs) in the open literature focus on low heat fluxes, that is, in the regime of validity of the Fourier heat conduction law. In this paper, by performing nonequilibrium molecular dynamics simulations we investigated thermal transport in a single-walled CNT bridging two Si slabs under constant high heat flux. An anomalous wave-like kinetic energy profile was observed, and a previously unexplored, wave-dominated energy transport mechanism is identified for high heat fluxes in CNTs, originated from excited low frequency transverse acoustic waves. The transported energy, in terms of a one-dimensional low frequency mechanical wave, is quantified as a function of the total heat flux applied and is compared to the energy transported by traditional Fourier heat conduction. The results show that the low frequency wave actually overtakes traditional Fourier heat conduction and efficiently transports the energy at high heat flux. Our findings reveal an important new mechanism for high heat flux energy transport in low-dimensional nanostructures, such as one-dimensional (1-D) nanotubes and nanowires, which could be very relevant to high heat flux dissipation such as in micro/nanoelectronics applications. read less USED (high confidence) S. Zhao, J. Xue, L. Liang, Y. Wang, and S. Yan, “Drilling Nanopores in Graphene with Clusters: A Molecular Dynamics Study,” Journal of Physical Chemistry C. 2012. link Times cited: 43 Abstract: Using molecular dynamics simulation with empirical potential… read moreAbstract: Using molecular dynamics simulation with empirical potentials, we show that energetic cluster ion beam is a powerful tool to drill nanopores in graphene, which have been proved to possess the potential applications in nanopore-based single-molecule detection and analysis such as DNA sequencing. Two types of clusters are considered, and different cluster size and incident energies are used to simulate the impact events. Our results demonstrate that by choosing suitable cluster species and controlling its energy, a nanopore with expected size and quality could be created in a graphene sheet. Furthermore, suspended carbon chains could be formed at the edge of the nanopore via adjusting the ion energy, which provided a feasible way to decorate the nanopore with chemical methods such as adsorption of large molecules or foreign atoms for biosensing applications. read less USED (high confidence) C. Carpenter, A. Ramasubramaniam, and D. Maroudas, “Analysis of vacancy-induced amorphization of single-layer graphene,” Applied Physics Letters. 2012. link Times cited: 20 Abstract: We report results of a systematic molecular-dynamics study o… read moreAbstract: We report results of a systematic molecular-dynamics study on the vacancy-induced amorphization of single-layer graphene. An inserted vacancy concentration between 5% and 10% marks the onset of the amorphization transition. The computed amorphized configurations are in agreement with recent experimental observations. We find that the transition becomes less abrupt with vacancy concentration as the temperature increases and determine the surface roughness of the defective graphene as a function of vacancy concentration. We also find that the electronic density of states of vacancy-amorphized graphene is characterized by introduction of localized states near the Fermi level of perfect single-layer graphene. read less USED (high confidence) Y. Ni et al., “Highly efficient thermal glue for carbon nanotubes based on azide polymers,” Applied Physics Letters. 2012. link Times cited: 40 Abstract: Equilibrium molecular dynamics (EMD) simulations and experim… read moreAbstract: Equilibrium molecular dynamics (EMD) simulations and experimental data show that the thermal contact resistance (TCR) between carbon nanotube (CNT) and azide-functionalized polymer with C-N bond is significantly decreased compared to that with Van der Waals force interaction. EMD simulations indicate that C-N covalent bond between CNT and polymer is the most efficient way to reduce TCR, and we measured the lowest thermal interface resistance of Si/CNT/Polymer/Cu thermal interface material as 1.40 mm2 KW−1 with CNTs of 10 μm length. These results provide useful information for future designs of thermal glue for carbon-based materials with better thermal conduction. read less USED (high confidence) S. Plimpton and A. Thompson, “Computational aspects of many-body potentials,” MRS Bulletin. 2012. link Times cited: 279 Abstract: We discuss the relative complexity and computational cost of… read moreAbstract: We discuss the relative complexity and computational cost of several popular many-body empirical potentials, developed by the materials science community over the past 30 years. The inclusion of more detailed many-body effects has come at a computational cost, but the cost still scales linearly with the number of atoms modeled. This is enabling very large molecular dynamics simulations with unprecedented atomic-scale fidelity to physical and chemical phenomena. The cost and scalability of the potentials, run in serial and parallel, are benchmarked in the LAMMPS molecular dynamics code. Several recent large calculations performed with these potentials are highlighted to illustrate what is now possible on current supercomputers. We conclude with a brief mention of high-performance computing architecture trends and the research issues they raise for continued potential development and use. read less USED (high confidence) C. Reddy, Y. Zhang, and V. Shenoy, “Patterned graphone—a novel template for molecular packing,” Nanotechnology. 2012. link Times cited: 28 Abstract: Precise positioning and packing of nanoscale building blocks… read moreAbstract: Precise positioning and packing of nanoscale building blocks is essential for the fabrication of many nanoelectro-mechanical devices. Carrying out such manipulations at the nanoscale still remains a challenge. Here we propose the use of graphone domain arrays embedded in a graphene sheet as a template to precisely position and pack molecules. Our atomistic simulations show that a graphone domain is able to adopt well-defined three-dimensional geometries, which in turn create ‘energy wells’ to trap molecules by means of physisorption. Using the C60 molecule as a model block, the stable trapping conditions are identified. The present work presents a novel route to position and pack molecules for nanoengineering applications. read less USED (high confidence) Z. Qi and H. S. Park, “Intrinsic energy dissipation in CVD-grown graphene nanoresonators.,” Nanoscale. 2012. link Times cited: 36 Abstract: We utilize classical molecular dynamics to study the quality… read moreAbstract: We utilize classical molecular dynamics to study the quality (Q)-factors of monolayer CVD-grown graphene nanoresonators. In particular, we focus on the effects of intrinsic grain boundaries of different orientations, which result from the CVD growth process, on the Q-factors. For a range of misorientation angles that are consistent with those seen experimentally in CVD-grown graphene, i.e. 0° to ∼20°, we find that the Q-factors for graphene with intrinsic grain boundaries are 1-2 orders of magnitude smaller than that of pristine monolayer graphene. We find that the Q-factor degradation is strongly influenced by both the symmetry and structure of the 5-7 defect pairs that occur at the grain boundary. Because of this, we also demonstrate that the Q-factors of CVD-grown graphene can be significantly elevated, and approach that of pristine graphene, through application of modest (1%) tensile strain. read less USED (high confidence) P. Shenai, Z. Xu, and Y. Zhao, “Applications of Principal Component Analysis (PCA) in Materials Science.” 2012. link Times cited: 24 Abstract: Nowadays we are living in the information age with the fast … read moreAbstract: Nowadays we are living in the information age with the fast development of computational technologies and modern facilities. Larger data sets are produced by experiments and computer simulations. In contrast to conventional scientific approaches where simple models are built to fit the data, automated procedures are urged to obtain insights into the core messages carried by the large volume of data. read less USED (high confidence) Q. Pei, Y. Zhang, Z. Sha, and V. Shenoy, “Carbon isotope doping induced interfacial thermal resistance and thermal rectification in graphene,” Applied Physics Letters. 2012. link Times cited: 82 Abstract: We investigate the thermal transport properties of carbon is… read moreAbstract: We investigate the thermal transport properties of carbon isotope doped graphene using nonequilibrium molecular dynamics simulations. We find that the interfacial thermal resistance between graphene and the isotope atoms causes severe reduction in thermal conductivity of the doped graphene. Furthermore, we find that thermal rectification occurs in the interface. Tensile strain leads to an increase in the interfacial thermal resistance and thermal rectification, while increasing temperature decreases these parameters. We calculate the phonon spectra and find that the thermal rectification is associated with the overlap areas in the phonon spectra. read less USED (high confidence) A. Lajevardipour, M. Neek‐Amal, and F. M. Peeters, “Thermomechanical properties of graphene: valence force field model approach,” Journal of Physics: Condensed Matter. 2012. link Times cited: 30 Abstract: Using the valence force field model of Perebeinos and Tersof… read moreAbstract: Using the valence force field model of Perebeinos and Tersoff (2009 Phys. Rev. B 79 241409(R)), different energy modes of suspended graphene subjected to tensile or compressive strain are studied. By carrying out Monte Carlo simulations it is found that: (i) only for small strains (|ε| ⪅ 0.02) is the total energy symmetrical in the strain, while it behaves completely differently beyond this threshold; (ii) the important energy contributions in stretching experiments are stretching, angle bending, an out-of-plane term, and a term that provides repulsion against π–π misalignment; (iii) in compressing experiments the two latter terms increase rapidly, and beyond the buckling transition stretching and bending energies are found to be constant; (iv) from stretching–compressing simulations we calculated the Young’s modulus at room temperature 350 ± 3.15 N m−1 , which is in good agreement with experimental results (340 ± 50 N m−1 ) and with ab initio results (322–353) N m−1 ; (v) molar heat capacity is estimated to be 24.64 J mol−1 K−1 which is comparable with the Dulong–Petit value, i.e. 24.94 J mol−1 K−1, and is almost independent of the strain; (vi) nonlinear scaling properties are obtained from height–height correlations at finite temperature; (vii) the used valence force field model results in a temperature independent bending modulus for graphene, and (viii) the Grüneisen parameter is estimated to be 0.64. read less USED (high confidence) H. Ghodsi and M. Kazemi, “Elastic Properties of Actin Assemblies in Different States of Nucleotide Binding,” Cellular and Molecular Bioengineering. 2012. link Times cited: 6 USED (high confidence) M. Wang, C. Yan, L. Ma, N. Hu, and M. Chen, “Effect of defects on fracture strength of graphene sheets,” Science & Engineering Faculty. 2012. link Times cited: 216 USED (high confidence) A. K. Naieni, P. Yaghoobi, and A. Nojeh, “First-principles study of field-emission from carbon nanotubes in the presence of methane,” Journal of Vacuum Science & Technology. B. Nanotechnology and Microelectronics: Materials, Processing, Measurement, and Phenomena. 2012. link Times cited: 7 Abstract: Carbon nanotubes are promising candidates for field-emitters… read moreAbstract: Carbon nanotubes are promising candidates for field-emitters. It has been shown that the presence of various gases can enhance or degrade the performance of nanotube emitters. Small hydrocarbons are of particular interest because of their ability to enhance the emission properties. The authors report a simulation study of field-emission from a carbon nanotube exposed to methane in various configurations with an emphasis on calculating the emission current. The Hartree–Fock theory combined with a Green’s functions approach was used for the simulations. It was observed that the change in the emission current strongly depends on the particular arrangement of the methane molecules on the nanotube. read less USED (high confidence) X. Wei, M. Naraghi, and H. Espinosa, “Optimal length scales emerging from shear load transfer in natural materials: application to carbon-based nanocomposite design.,” ACS nano. 2012. link Times cited: 191 Abstract: Numerous theoretical and experimental studies on various spe… read moreAbstract: Numerous theoretical and experimental studies on various species of natural composites, such as nacre in abalone shells, collagen fibrils in tendon, and spider silk fibers, have been pursued to provide insight into the synthesis of novel bioinspired high-performance composites. However, a direct link between the mechanical properties of the constituents and the various geometric features and hierarchies remains to be fully established. In this paper, we explore a common denominator leading to the outstanding balance between strength and toughness in natural composite materials. We present an analytical model to link the mechanical properties of constituents, their geometric arrangement, and the chemistries used in their lateral interactions. Key critical overlap length scales between adjacent reinforcement constituents, which directly control strength and toughness of composite materials, emerge from the analysis. When these length scales are computed for three natural materials-nacre, collagen molecules, and spider silk fibers-very good agreement is found as compared with experimental measurements. The model was then used to interpret load transfer capabilities in synthetic carbon-based materials through parametrization of in situ SEM shear experiments on overlapping multiwall carbon nanotubes. read less USED (high confidence) H. Liao, F. Zhu, and S. Liu, “Mechanical stretching behavior simulation of SWCNT and SWCNT-Ni,” 2011 International Symposium on Advanced Packaging Materials (APM). 2011. link Times cited: 0 Abstract: When one-dimensional single atom chain was placed at the cen… read moreAbstract: When one-dimensional single atom chain was placed at the center of single wall carbon nano-tube (SWCNT) along the axis, and using the molecular dynamics simulation, the mechanical strength of a single-walled could be obtained in terms of the stress-strain curve. At this temperature of 0K, the ultimate stress of a SWCNT with one-dimensional single atom chain was higher than that of a SWCNT without this chain structure, and the result was reverse at 300K. With regard to the rupture of SWCNT, it can be observed that the SWCNT without single atom chain yielded more easily than the decorated SWCNT. The rupture of SWCNT was initiated at the location of distortion, which was introduced by thermal fluctuation and the interference of metal atoms. With the temperature rising, the SWCNT with or without atom Ni will be more likely to fracture. At last, for investigating the influence of increasing atom chains on the mechanical properties of the SWCNT, multi atom chains structure was also used in implementing the same simulation. read less USED (high confidence) R. Zhao and C.-L. Luo, “Torsion-induced mechanical couplings of single-walled carbon nanotubes,” Applied Physics Letters. 2011. link Times cited: 16 Abstract: Torsion-induced mechanical couplings of single-walled carbon… read moreAbstract: Torsion-induced mechanical couplings of single-walled carbon nanotubes (SWCNTs) are studied by using molecular dynamics simulations. We show that these mechanical couplings are strongly dependent on the chirality of SWCNTs. In particular, the structural difference between armchair and zigzag nanotubes can remarkably influence the Poynting effect [J. H. Poynting, Proc. R. Soc. Lond. A 82, 546 (1909)], i.e., torsion-induced axial strain response. For SWCNTs with large aspect ratios and small chiral angles, an intriguing torsion-induced bending effect is observed. This effect results from the release of torsion-induced axial stress and may probably affect the torsional oscillation behavior of nanoelectromechanical systems based on SWCNTs. read less USED (high confidence) P. Shenai, Z. Xu, and Y. Zhao, “Thermal-gradient-induced interaction energy ramp and actuation of relative axial motion in short-sleeved double-walled carbon nanotubes,” Nanotechnology. 2011. link Times cited: 17 Abstract: We investigate the phenomenon of actuation of relative linea… read moreAbstract: We investigate the phenomenon of actuation of relative linear motion in double-walled carbon nanotubes (DWNTs) resulting from a temperature gradient. Molecular dynamics simulations of DWNTs with short outer tube reveal that the outer tube is driven towards the cold end of the long inner tube. It is also found that the terminal velocity of the sleeve roughly depends linearly on the applied thermal gradient. We calculate the inter-tube interaction energy surface which is revealed to have a gradient depending upon the applied thermal gradient. Consequently, it is proposed that the origin of the thermophoretic motion of the outer tube may be attributed partially to the existence of such an energy gradient. A simple analytical model is presented accounting for the gradient in energy profile as well as the effect of biased thermal noise. It is shown that the proposed model predicts the dynamical behaviour of the long-time performance reasonably well. read less USED (high confidence) M. Schwarzbart and A. Steindl, “Buckling of a non‐Euclidean annular plate,” PAMM. 2011. link Times cited: 2 Abstract: The effect of free edges of a monoatomic graphene sheet lead… read moreAbstract: The effect of free edges of a monoatomic graphene sheet leads to excess edge energy due to the reconstruction of dangling bonds. Molecular static calculations show, that individual carbon atoms near the edge are displaced out of plane for relaxed nanoribbons [1]. In this work we are considering the effect of excess edge energy for almost circular graphene patches. To tackle this problem in the framework of continuum mechanics we are modelling the edge effect with a non‐Euclidean plate model. A linear stability analysis of the flat configuration leads to the stability boundary in the parameter plane. (© 2011 Wiley‐VCH Verlag GmbH & Co. KGaA, Weinheim) read less USED (high confidence) Y. Zhang, Z. Hu, Y. Zhang, L. Ye, and J. Liu, “Molecular dynamics simulation for the bonding energy of metal-SWNT interface,” 2011 12th International Conference on Electronic Packaging Technology and High Density Packaging. 2011. link Times cited: 4 Abstract: For this paper, we carried out molecular dynamics simulation… read moreAbstract: For this paper, we carried out molecular dynamics simulation to calculate the bonding energy of the metal-SWNT interface. Three kinds of metal, namely iron, nickel and gold, were studied. The results show that the iron-SWNT interface has the strongest bonding energy, and then nickel and gold. To confirm these results, tensile loading tests were also performed to study the breaking force of the metal-SWNT interface. The force needed to debond the metal-SWNT interface is at the order of nano-newton. The more adhesion energy the interface has, the bigger force that must be loaded to break the joint. read less USED (high confidence) Z. Schiffer, P. Kennedy, Z. Postawa, and B. Garrison, “Molecular Dynamics Simulations Elucidate the Synergy of C60 and Low-Energy Ar Cobombardment for Molecular Depth Profiling,” Journal of Physical Chemistry Letters. 2011. link Times cited: 10 Abstract: The use of cluster beams in secondary ion mass spectrometry … read moreAbstract: The use of cluster beams in secondary ion mass spectrometry enables molecular depth profiling, a technique that is essential to many fields. The success of the technique often hinges upon the chemical nature of the substrate, the kinetic energy and incident angle of the primary cluster ion beam, and the sample temperature. It has been shown experimentally that the quality of depth profiles can be improved with cobombardment by a C60 cluster beam and a low-energy argon (Ar) beam. We present molecular dynamics simulations to elucidate the mechanistic reasons for the improved molecular depth profiles with an aim of understanding whether this cobombardment approach is generally applicable. We conclude that the low-energy Ar beam breaks up the surface topology created by the C60 beam, increasing the sputtering yield and reducing the buildup of chemical damage. The simulations also suggest that an equivalent result could be achieved without the Ar cobombardment by optimizing the conditions of the C60 beam. read less USED (high confidence) Y. Sun, D. Ma, K. Xu, and P. Chu, “Reversible phase transformation in graphene nano-ribbons: Lattice shearing based mechanism,” Acta Materialia. 2011. link Times cited: 22 USED (high confidence) P. Greaney, G. Lani, G. Cicero, and J. Grossman, “Mpemba-Like Behavior in Carbon Nanotube Resonators,” Metallurgical and Materials Transactions A. 2011. link Times cited: 29 USED (high confidence) A. Rajabpour, S. M. V. Allaei, and F. Kowsary, “Interface thermal resistance and thermal rectification in hybrid graphene-graphane nanoribbons: A nonequilibrium molecular dynamics study,” Applied Physics Letters. 2011. link Times cited: 98 Abstract: The thermal conductivity of hybrid graphene-graphane nanorib… read moreAbstract: The thermal conductivity of hybrid graphene-graphane nanoribbons (GGNRs) have been investigated using nonequilibrium molecular dynamics simulations. The interface between graphene and graphane leads to a Kapitza resistance with strongly dependence on the imposed heat flux direction. We introduce GGNRs as promising thermal rectifiers at room temperature. By calculating phonon spectra, underlying mechanisms were investigated. read less USED (high confidence) Y. Jing and N. Aluru, “Atomistic simulations on the mechanical properties of a silicon nanofilm covered with graphene,” Computational Materials Science. 2011. link Times cited: 19 USED (high confidence) Z. Zhang and T. Li, “Ultrafast nano-oscillators based on interlayer-bridged carbon nanoscrolls,” Nanoscale Research Letters. 2011. link Times cited: 32 USED (high confidence) H. Wang and M. Upmanyu, “Saddles, twists, and curls: shape transitions in freestanding nanoribbons.,” Nanoscale. 2011. link Times cited: 14 Abstract: Efforts to modulate the electronic properties of atomically … read moreAbstract: Efforts to modulate the electronic properties of atomically thin crystalline nanoribbons requires precise control over their morphology. Here, we perform atomistic simulations on freestanding graphene nanoribbons (GNRs) to first identify the minimal shapes as a function of ribbon width, and then develop a core-edge framework based on classical plate theory to explore the effect of size and ribbon elasticity in more general systems. The elastic edge-edge interactions are central to stabilization of the flat phase in ultra-narrow ribbons, and their bifurcation to twisted and bent shapes at critical widths that vary inversely with edge stress. In the case of compressive edge stress, we uncover hitherto ignored saddle shapes that are energetically indistinguishable with twisted shapes in the vicinity of the bifurcation yet dominate the morphological space with increasing width. At much larger widths with negligible edge-edge interactions, rippling instabilities set in, i.e. edge ripples and midline dimples for compressive and tensile edge stresses, respectively. Simulations of tapering GNRs reveal the dynamics of these shape transitions. Our results capture the interplay between geometry and mechanics that sets the morphology of crystalline nanoribbons and also highlight the utility of the core-edge framework in developing a unified understanding of the interplay. read less USED (high confidence) C. D. Reddy, Y.-W. Zhang, and V. B. Shenoy, “Influence of substrate on edge rippling in graphene sheets,” Modelling and Simulation in Materials Science and Engineering. 2011. link Times cited: 8 Abstract: The morphology of graphene sheets overlying a substrate play… read moreAbstract: The morphology of graphene sheets overlying a substrate plays an important role in controlling the electronic behaviour of graphene-based electronic devices. Atomistic simulations and energetic analysis are performed to study the morphology of graphene edges on a model substrate. We find that the van der Waals interactions are able to significantly reduce the amplitude, penetration depth and wavelength of edge ripples for a single-layer graphene sheet, but suppression of the ripples is not observed in multilayer graphene sheets with unsaturated edges. We explain this difference using an analytical model that accounts for the energetics of rippling and van der Waals interactions. read less USED (high confidence) H. Ghodsi and M. T. Kazemi, “Elastic Properties of Actin Assemblies in Different States of Nucleotide Binding,” Cellular and Molecular Bioengineering. 2011. link Times cited: 0 USED (high confidence) R. Raghunathan, P. Greaney, and J. Grossman, “Phonostat: thermostatting phonons in molecular dynamics simulations.,” The Journal of chemical physics. 2011. link Times cited: 4 Abstract: Thermostat algorithms in a molecular dynamics simulation mai… read moreAbstract: Thermostat algorithms in a molecular dynamics simulation maintain an average temperature of a system by regulating the atomic velocities rather than the internal degrees of freedom. Herein, we present a "phonostat" algorithm that can regulate the total energy in a given internal degree of freedom. In this algorithm, the modal energies are computed at each time step using a mode-tracking scheme and then the system is driven by an external driving force of desired frequency and amplitude. The rate and amount of energy exchange between the phonostat and the system is controlled by two distinct damping parameters. Two different schemes for controlling the external driving force amplitude are also presented. In order to test our algorithm, the method is applied initially to a simple anharmonic oscillator for which the role of various phonostat parameters can be carefully tested. We then apply the phonostat to a more realistic (10,0) carbon nanotube system and show how such an approach can be used to regulate energy of highly anharmonic modes. read less USED (high confidence) L. Xu, T. Ma, Y.-zhong Hu, and H. Wang, “Vanishing stick–slip friction in few-layer graphenes: the thickness effect,” Nanotechnology. 2011. link Times cited: 107 Abstract: We report the thickness dependence of intrinsic friction in … read moreAbstract: We report the thickness dependence of intrinsic friction in few-layer graphenes, adopting molecular dynamics simulations. The friction force drops dramatically with decreasing number of layers and finally approaches zero with two or three layers. The results, which are robust over a wide range of temperature, shear velocity, and pressure are quantitatively explained by a theoretical model with regard to lateral stiffness, slip length, and maximum lateral force, which could provide a new conceptual framework for understanding stick–slip friction. The results reveal the crucial role of the dimensional effect in nanoscale friction, and could be helpful in the design of graphene-based nanodevices. read less USED (high confidence) T.-H. Liu, G. Gajewski, C. Pao, and C.-C. Chang, “Structure, energy, and structural transformations of graphene grain boundaries from atomistic simulations,” Carbon. 2011. link Times cited: 141 USED (high confidence) C. Reddy, Q. Cheng, V. Shenoy, and Y. Zhang, “Interfacial properties and morphologies of graphene-graphane composite sheets,” Journal of Applied Physics. 2011. link Times cited: 24 Abstract: The interfaces between graphene and graphane play an importa… read moreAbstract: The interfaces between graphene and graphane play an important role in developing graphene-graphane-based electronic devices. We identify three most common types of graphane-graphene interface, and perform atomistic simulations to determine three key parameters that characterize the interface structural properties: mismatch strain, tilt angle, and interfacial stress. Further through atomistic simulations, we find that the composite sheets can develop complex morphologies, such as ripples, warps and wedges. These morphologies can be accurately reproduced by our finite-element modeling with interfacial properties explicitly included. We further show that mismatch in the lattice parameters between graphene and graphane is the dominant factor that causes the complex morphologies. Our work provides a quantitative framework for analyzing and designing graphene-graphane composite sheet architectures, and further for exploring their electronic properties. read less USED (high confidence) H. S. Shen, L. Shen, and C.-li Zhang, “Nonlocal plate model for nonlinear bending of single-layer graphene sheets subjected to transverse loads in thermal environments,” Applied Physics A. 2011. link Times cited: 53 USED (high confidence) J. Templeton, R. Jones, and G. Wagner, “Application of a field-based method to spatially varying thermal transport problems in molecular dynamics,” Modelling and Simulation in Materials Science and Engineering. 2010. link Times cited: 15 Abstract: This paper derives a methodology to enable spatial and tempo… read moreAbstract: This paper derives a methodology to enable spatial and temporal control of thermally inhomogeneous molecular dynamics (MD) simulations. The primary goal is to perform non-equilibrium MD of thermal transport analogous to continuum solutions of heat flow which have complex initial and boundary conditions, moving MD beyond quasi-equilibrium simulations using periodic boundary conditions. In our paradigm, the entire spatial domain is filled with atoms and overlaid with a finite element (FE) mesh. The representation of continuous variables on this mesh allows fixed temperature and fixed heat flux boundary conditions to be applied, non-equilibrium initial conditions to be imposed and source terms to be added to the atomistic system. In effect, the FE mesh defines a large length scale over which atomic quantities can be locally averaged to derive continuous fields. Unlike coupling methods which require a surrogate model of thermal transport like Fourier's law, in this work the FE grid is only employed for its projection, averaging and interpolation properties. Inherent in this approach is the assumption that MD observables of interest, e.g. temperature, can be mapped to a continuous representation in a non-equilibrium setting. This assumption is taken advantage of to derive a single, unified set of control forces based on Gaussian isokinetic thermostats to regulate the temperature and heat flux locally in the MD. Example problems are used to illustrate potential applications. In addition to the physical results, data relevant to understanding the numerical effects of the method on these systems are also presented. read less USED (high confidence) G. Hantal, S. Picaud, P. Hoang, V. Voloshin, N. N. Medvedev, and P. Jedlovszky, “Water adsorption isotherms on porous onionlike carbonaceous particles. Simulations with the grand canonical Monte Carlo method.,” The Journal of chemical physics. 2010. link Times cited: 34 Abstract: The grand canonical Monte Carlo method is used to simulate t… read moreAbstract: The grand canonical Monte Carlo method is used to simulate the adsorption isotherms of water molecules on different types of model soot particles. These soot models are constructed by first removing atoms from onion-fullerene structures in order to create randomly distributed pores inside the soot, and then performing molecular dynamics simulations, based on the reactive adaptive intermolecular reactive empirical bond order (AIREBO) description of the interaction between carbon atoms, to optimize the resulting structures. The obtained results clearly show that the main driving force of water adsorption on soot is the possibility of the formation of new water-water hydrogen bonds with the already adsorbed water molecules. The shape of the calculated water adsorption isotherms at 298 K strongly depends on the possible confinement of the water molecules in pores of the carbonaceous structure. We found that there are two important factors influencing the adsorption ability of soot. The first of these factors, dominating at low pressures, is the ability of the soot of accommodating the first adsorbed water molecules at strongly hydrophilic sites. The second factor concerns the size and shape of the pores, which should be such that the hydrogen bonding network of the water molecules filling them should be optimal. This second factor determines the adsorption properties at higher pressures. read less USED (high confidence) H. Zhao and N. Aluru, “Temperature and strain-rate dependent fracture strength of graphene,” Journal of Applied Physics. 2010. link Times cited: 333 Abstract: We investigate the variation in fracture strength of graphen… read moreAbstract: We investigate the variation in fracture strength of graphene with temperature, strain rate, and crack length using molecular dynamics (MD) simulations, kinetic analysis of fracture with a nonlinear elastic relation, and the quantized fracture mechanics theory. Young’s modulus does not vary significantly with temperature until about 1200 K, beyond which the material becomes softer. Temperature plays a more important role in determining the fracture strength of graphene. Our studies suggest that graphene can be a strong material even, when subjected to variations in temperature, strain rate, and cracks. read less USED (high confidence) V. Shenoy, C. Reddy, and Y.-W. Zhang, “Spontaneous curling of graphene sheets with reconstructed edges.,” ACS nano. 2010. link Times cited: 83 Abstract: Recent microscopy experiments have revealed novel reconstruc… read moreAbstract: Recent microscopy experiments have revealed novel reconstructions of the commonly observed zigzag and armchair edges in graphene. We show that tensile edge stresses at these reconstructed edges lead to large-scale curling of graphene sheets into cylindrical surfaces, in contrast to the warping instabilities predicted for unreconstructed edges. Using atomic-scale simulations and large deformation plate models, we have derived scaling laws for the curvature and strain of the curled sheets in terms of the edge stress, shape, and the bending and stretching moduli. For graphene nanoribbons, we show that tensile edge stress leads to periodic ripples, whose morphologies are distinct from those observed due to thermal fluctuations or thermally generated mismatch strains. Since the electronic properties of graphene can be altered by both curvatures and strain, our work provides a route for potentially fabricating nanoelectronic devices such as sensors or switches that can detect stresses induced by dopants at the edges. read less USED (high confidence) Z. Qi, F. Zhao, X. Zhou, Z. Sun, H. S. Park, and H. Wu, “A molecular simulation analysis of producing monatomic carbon chains by stretching ultranarrow graphene nanoribbons,” Nanotechnology. 2010. link Times cited: 27 Abstract: Atomistic simulations were utilized to develop fundamental i… read moreAbstract: Atomistic simulations were utilized to develop fundamental insights regarding the elongation process starting from ultranarrow graphene nanoribbons (GNRs) and resulting in monatomic carbon chains (MACCs). There are three key findings. First, we demonstrate that complete, elongated, and stable MACCs with fracture strains exceeding 100% can be formed from both ultranarrow armchair and zigzag GNRs. Second, we demonstrate that the deformation processes leading to the MACCs have strong chirality dependence. Specifically, armchair GNRs first form DNA-like chains, then develop into monatomic chains by passing through an intermediate configuration in which monatomic chain sections are separated by two-atom attachments. In contrast, zigzag GNRs form rope-ladder-like chains through a process in which the carbon hexagons are first elongated into rectangles; these rectangles eventually coalesce into monatomic chains through a novel triangle–pentagon deformation structure under further tensile deformation. Finally, we show that the width of GNRs plays an important role in the formation of MACCs, and that the ultranarrow GNRs facilitate the formation of full MACCs. The present work should be of considerable interest due to the experimentally demonstrated feasibility of using narrow GNRs to fabricate novel nanoelectronic components based upon monatomic chains of carbon atoms. read less USED (high confidence) C. Cornwell et al., “Design of Very High-Strength Aligned and Interconnected Carbon Nanotube Fibers Based on Molecular Dynamics Simulations,” 2010 DoD High Performance Computing Modernization Program Users Group Conference. 2010. link Times cited: 0 Abstract: The principal objective of this work is to implement a new m… read moreAbstract: The principal objective of this work is to implement a new material development paradigm using atomistic simulations to guide the molecular design of materials. Traditional empirical macroscopic material development studies omit the fundamental insight needed to understand material behavior at the atomic and molecular levels where material response begins. The new paradigm relies heavily on a tight integration between simulation and experimental efforts to design and process new materials with nanometer-scale precision. Exploiting nanotechnology requires atomic-molecular-level material design and the ability to process these materials with atomic-molecular-level precision. Processing materials with nanoscale precision poses formidable theoretical, computational, and experimental challenges to developing advanced materials. High performance computers and advanced physics-based simulations can complement experimental efforts to design, test, synthesize, and analyze novel materials and innovative structural designs. This method can be applied to a wide range of material designs. As a proof of concept, we began our work on the design of novel carbon nanotube-based materials. The mechanical properties of carbon nanotubes such as low-density, high-stiffness, and exceptional strength make them ideal candidates for reinforcement material in a wide range of high performance composites. Molecular dynamics simulations are used to predict the tensile response of fibers composed of aligned carbon nanotubes with intermolecular bonds of interstitial carbon atoms. The effects of bond density and carbon nanotube length distribution on fiber strength and stiffness are investigated. Results indicate that including cross link atoms between the carbon nanotubes in the strands significantly increases the load transfer between the carbon nanotubes and prevents them from slipping. This increases the elastic modulus and yield strength of the fibers by an order-of-magnitude. Carbon nanotube-based materials appear poised to affect civil and military engineering significantly over the next two decades by providing materials with an order-of- magnitude improvement in strength-to-weight and stiffness-to-weight ratios over existing materials. read less USED (high confidence) Q. Pei, Y.-W. Zhang, and V. Shenoy, “Mechanical properties of methyl functionalized graphene: a molecular dynamics study,” Nanotechnology. 2010. link Times cited: 119 Abstract: Molecular dynamics simulations have been performed to study … read moreAbstract: Molecular dynamics simulations have been performed to study the mechanical properties of methyl (CH3) functionalized graphene. It is found that the mechanical properties of functionalized graphene greatly depend on the location, distribution and coverage of CH3 radicals on graphene. Surface functionalization exhibits a much stronger influence on the mechanical properties than edge functionalization. For patterned functionalization on graphene surfaces, the radicals arranged in lines perpendicular to the tensile direction lead to larger strength deterioration than those parallel to the tensile direction. For random functionalization, the elastic modulus of graphene decreases gradually with increasing CH3 coverage, while both the strength and fracture strain show a sharp drop at low coverage. When CH3 coverage reaches saturation, the elastic modulus, strength and fracture strain of graphene drop by as much as 18%, 43% and 47%, respectively. read less USED (high confidence) L. Pastewka, S. Moser, and M. Moseler, “Atomistic Insights into the Running-in, Lubrication, and Failure of Hydrogenated Diamond-Like Carbon Coatings,” Tribology Letters. 2010. link Times cited: 118 USED (high confidence) X. Song, Z. Gan, S. Liu, H. Yan, and Q. Lv, “Computational study of thermocompression bonding of carbon nanotubes to metallic substrates,” Journal of Applied Physics. 2009. link Times cited: 17 Abstract: Thermocompression bonding of carbon nanotubes (CNTs) to meta… read moreAbstract: Thermocompression bonding of carbon nanotubes (CNTs) to metallic substrates is studied using molecular dynamics. The interaction of the CNT and the metal cluster at high temperature is investigated first. For the diffusion bonding process, the effects of temperature and external pressure are examined. In addition, we apply the tensile loading to examine the mechanical properties and the failure modes during the debonding process. The results show that formation of coalescence structure between the CNT and the metal cluster provides a nanoscale metal surface to facilitate diffusion bonding. Both high temperature and high pressure will enhance the bonding. In addition, the debonding position of the samples under the tensile loading depends on the competition of CNT-metal and metal-metal interface strength. For samples bonded under high temperature and high pressure, the debonding first occurs at the CNT-metal interface. While for samples bonded under low temperature and low pressure, the interdiffusion is n... read less USED (high confidence) Z. Wang, M. Devel, and B. Dulmet, “Twisting carbon nanotubes: A molecular dynamics study,” Surface Science. 2009. link Times cited: 13 USED (high confidence) B. Czerwinski, L. Rzeznik, R. Paruch, B. Garrison, and Z. Postawa, “Damage analysis of benzene induced by keV fullerene bombardment,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2009. link Times cited: 3 USED (high confidence) C. Reddy, A. Ramasubramaniam, V. Shenoy, and Y. Zhang, “Edge elastic properties of defect-free single-layer graphene sheets,” Applied Physics Letters. 2009. link Times cited: 105 Abstract: An energetic model is proposed to describe the edge elastic … read moreAbstract: An energetic model is proposed to describe the edge elastic properties of defect-free single-layer graphene sheets. Simulations with the adaptive intermolecular reactive empirical bond order potential are used to extract the edge stress and edge moduli for different edges structures, namely, zigzag and armchair edges, zigzag and armchair edges terminated with hydrogen, and reconstructed zigzag and armchair edges. It is found that the properties of graphene are sensitively dependent on the edge structures; armchair and zigzag edges with and without hydrogen termination are in compression, while reconstructed edges are in tension. read less USED (high confidence) G. Wagner, R. Jones, J. Templeton, and M. Parks, “An atomistic-to-continuum coupling method for heat transfer in solids,” Computer Methods in Applied Mechanics and Engineering. 2008. link Times cited: 69 USED (high confidence) B. Czerwinski, L. Rzeznik, K. Stachura, R. Paruch, B. Garrison, and Z. Postawa, “Applications of fullerene beams in analysis of thin layers,” Vacuum. 2008. link Times cited: 9 USED (high confidence) Z. Wang, M. Devel, R. Langlet, and B. Dulmet, “Electrostatic deflections of cantilevered semiconducting single-walled carbon nanotubes,” Physical Review B. 2007. link Times cited: 22 Abstract: How carbon nanotubes behave in an external electric field? W… read moreAbstract: How carbon nanotubes behave in an external electric field? What will be the relation between the intensity of the electric field and the tube's deformation? What are the geometry effects on the response of carbon nanotubes to electric fields? To answer these questions, we have developed a new combined computational technique to study electrostatic field induced deformations of carbon nanotubes. In this work, we find that the deflection angle of cantilevered semiconducting single-walled carbon nanotubes is proportional to the square of the electric field strength, and the tubes can be most bent when the field angle ranges from 45 to 60 degrees. Furthermore, the deflection angle is also found to be proportional to the aspect ratio L/R. Our results provide a good qualitative agreement with those of one previous experimental study. read less USED (high confidence) M. F. Russo, I. A. Wojciechowski, and B. Garrison, “Sputtering of amorphous ice induced by C60 and Au3 clusters,” Applied Surface Science. 2006. link Times cited: 29 USED (high confidence) S. Stuart, M. T. Knippenberg, O. Kum, and P. Krstic, “Simulation of amorphous carbon with a bond-order potential,” Physica Scripta. 2006. link Times cited: 19 Abstract: Simulations of amorphous carbon were performed at densities … read moreAbstract: Simulations of amorphous carbon were performed at densities ranging from 2.0 to 3.0 g cm−3 with a reactive bond-order potential. The fraction of sp3 bonding increases with increasing density, as is observed experimentally, but with generally too much sp2 content. Ring size distributions are calculated, with a number of large rings observed. It is suggested that structural quantities that are more directly related to physical properties—such as void volumes and coordination numbers—are more useful than ring size distributions in characterizing the structure of amorphous carbon. Void fractions and void volume distributions are calculated, indicating that a percolating void network exists at 2.0 g cm−3, large, non-percolating voids exist at intermediate density, and no voids are found larger than atomic volumes at 3.0 g cm−3. read less USED (high confidence) A. Nikitin et al., “Hydrogenation of single-walled carbon nanotubes.,” Physical review letters. 2005. link Times cited: 212 Abstract: Towards the development of a useful mechanism for hydrogen s… read moreAbstract: Towards the development of a useful mechanism for hydrogen storage, we have studied the hydrogenation of single-walled carbon nanotubes with atomic hydrogen using core-level photoelectron spectroscopy and x-ray absorption spectroscopy. We find that atomic hydrogen creates C-H bonds with the carbon atoms in the nanotube walls, and such C-H bonds can be completely broken by heating to 600 degrees C. We demonstrate approximately 65 +/- 15 at % hydrogenation of carbon atoms in the single-walled carbon nanotubes, which is equivalent to 5.1 +/- 1.2 wt % hydrogen capacity. We also show that the hydrogenation is a reversible process. read less USED (high confidence) V. Solomko, A. Delcorte, B. Garrison, and P. Bertrand, “Sputtering of a polycyclic hydrocarbon molecule: TOF-SIMS experiments and molecular dynamic simulations,” Applied Surface Science. 2004. link Times cited: 5 USED (high confidence) A. Delcorte, B. Arezki, and B. Garrison, “Matrix and substrate effects on the sputtering of a 2 kDa molecule: Insights from molecular dynamics,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2003. link Times cited: 4 USED (high confidence) I. Zyulkov et al., “Area-selective Ru ALD by amorphous carbon modification using H plasma: from atomistic modeling to full wafer process integration,” Materials Advances. 2020. link Times cited: 3 Abstract: Selective ALD of Ru on Si-based materials with simultaneous … read moreAbstract: Selective ALD of Ru on Si-based materials with simultaneous ALD inhibition on the amorphous carbon surface enabled by remote H plasma. read less USED (high confidence) S. Meguid, A. R. Alian, and M. Dewapriya, “Atomistic Modelling of Nanoindentation of Multilayered Graphene-Reinforced Nanocomposites.” 2018. link Times cited: 10 USED (high confidence) S. H. Madani, M. Sabour, and M. Fadaee, “Molecular dynamics simulation of vibrational behavior of annular graphene sheet: Identification of nonlocal parameter.,” Journal of molecular graphics & modelling. 2018. link Times cited: 17 USED (high confidence) B. Song, K. Cai, J. Shi, Y. Xie, and Q. Qin, “Coupling effect of van der Waals, centrifugal, and frictional forces on a GHz rotation-translation nano-convertor.,” Physical chemistry chemical physics : PCCP. 2018. link Times cited: 11 Abstract: A nano rotation-translation convertor with a deformable roto… read moreAbstract: A nano rotation-translation convertor with a deformable rotor is presented, and the dynamic responses of the system are investigated considering the coupling among the van der Waals (vdW), centrifugal and frictional forces. When an input rotational frequency (ω) is applied at one end of the rotor, the other end exhibits a translational motion, which is an output of the system and depends on both the geometry of the system and the forces applied on the deformable part (DP) of the rotor. When centrifugal force is stronger than vdW force, the DP deforms by accompanying the translation of the rotor. It is found that the translational displacement is stable and controllable on the condition that ω is in an interval. If ω exceeds an allowable value, the rotor exhibits unstable eccentric rotation. The system may collapse with the rotor escaping from the stators due to the strong centrifugal force in eccentric rotation. In a practical design, the interval of ω can be found for a system with controllable output translation. read less USED (high confidence) H. M. Yoon and J. S. Lee, “Effect of the Contact Geometry on Nanoscale and Subnanoscale Friction Behaviors,” IEEE Transactions on Magnetics. 2017. link Times cited: 0 Abstract: Stick-slip motion is the most well-known phenomenon in nanot… read moreAbstract: Stick-slip motion is the most well-known phenomenon in nanotribology. Maier et al. previously studied the dependence of slip time on contact geometry. In their paper, they were able to identify the intermediate state during slip motion. However, detailed study of this intermediate state is difficult due to the fast dynamics. The advantage of molecular dynamics (MD) simulation is that it can provide detailed information and direct visualization of the tribological phenomena on a time scale of a few nanoseconds. In this paper, we investigate the detailed mechanism of stick-slip motion in nanoscale. MD simulation precisely mimics friction force microscopy experiments. In MD simulations, a crystalline Si tip slides on a graphene surface, and the tip size is varied. The simulation results provide evidence of the intermediate state during slip motion and reveal the hierarchical structure of the stick-slip motion in nanoscale. Detailed relations among stick-slip motion, contact geometry, and energy state are also analyzed. read less USED (high confidence) G. Lei and H. Liu, “Thermal transport properties of graphyne nanotube and carbon nanotube hybrid structure: nonequilibrium molecular dynamics simulations,” Journal of Materials Science. 2017. link Times cited: 11 USED (high confidence) J. P. Mendez, F. Arca, and M. P. Ariza, “STABILITY OF ASYMMETRIC GRAIN BOUNDARIES IN GRAPHENE.” 2016. link Times cited: 2 Abstract: In the field of electronics, due to its excellent mechanical… read moreAbstract: In the field of electronics, due to its excellent mechanical and electrical properties, graphene has become the most promising material for the production of next generation thin and flexible graphene-based electronic components. In this work, we present an assessment of the thermal stability and dynamics of asymmetric grain boundaries in graphene for different misorientation angles at finite temperature and up to extremely high temperatures. In particular, we have focused on configurations with misorientation angle of 16.1◦, 30◦ and 38.2◦. In contrast to pristine defect-free graphene, which has no band-gap and therefore is of limited use for semiconductor-based electronics, it has been shown theoretically that line defects in graphene might insert transport gaps, opening up the possibility of device applications based on the structural engineering of graphene boundaries. read less USED (high confidence) L. Bai, “Molecular dynamics study on tribological behaviors of DLC films.” 2016. link Times cited: 0 USED (high confidence) K. C. Hoang, Y. Fu, and J. H. Song, “An hp-proper orthogonal decomposition–moving least squares approach for molecular dynamics simulation,” Computer Methods in Applied Mechanics and Engineering. 2016. link Times cited: 22 USED (high confidence) F. Zhu, H. Liao, K. Tang, Y. Chen, and S. Liu, “Molecular dynamics study on the effect of temperature on the tensile properties of single-walled carbon nanotubes with a ni-coating,” Journal of Nanomaterials. 2015. link Times cited: 7 Abstract: The effect of temperature on the tensile behavior of the arm… read moreAbstract: The effect of temperature on the tensile behavior of the armchair (6, 6) single-walled carbon nanotubes with a Ni-coating (SWCNT-Ni) was investigated using molecular dynamics (MD) methods. The mechanical properties of SWCNT-Ni and SWCNT were calculated and analyzed at different temperatures in the range from 220 K to 1200 K. From the MD results, temperature was determined to be the crucial factor affecting the mechanical properties of SWCNT-Ni and SWCNT. After coating nickel atoms onto the surface of a SWCNT, the Young's modulus, tensile strength, and tensile failure strain of SWCNT were greatly reduced with temperature rising, indicating that the nickel atoms on the surface of SWCNT degrade its mechanical properties. However, at high temperature, the Young's modulus of both the SWCNT and the SWCNT-Ni exhibited significantly greater temperature sensitivity than at low temperatures, as the mechanical properties of SWCNT-Ni were primarily dominated by temperature and C-Ni interactions. During these stretching processes at different temperatures, the nickel atoms on the surface of SWCNT-Ni could obtain the amount of energy sufficient to break the C-C bonds as the temperature increases. read less USED (high confidence) K. Cai, Y. Li, H. Yin, and Q. Qin, “Length difference effect on dynamic behaviors of double-walled carbon nanotubes,” Mechanics & Industry. 2015. link Times cited: 2 Abstract: The effect of length difference on oscillation and rotation … read moreAbstract: The effect of length difference on oscillation and rotation of the inner tube in a double-walled carbon nanotube (DWNT) is investigated. In the analysis, the inner tubes of the DWNTs are assumed to be of the same length but the length of the outer tubes may be different from that of inner tubes. Further, the outer tube is entirely fixed after adequate relaxation at 300 K and the inner tube is unconstrained and can move freely in the outer tube. In the simulations, each bi-tube system initially has a symmetric cross-section, and the inner tube oscillates while rotating along its own axis. The dynamic behavior studied includes oscillation and rotation of the inner tubes. The oscillation decreases along with an increase in the length difference. A greater length difference between the two tubes in a bi-tube system leads to a smaller amplitude of oscillation of mass center of the inner tube (MCIT) and a higher self-rotating speed. Moreover, the inner tube in a bi-tube with different chirality of the two tubes may have different self-rotational directions. read less USED (high confidence) Z. Zhang, Y. Yang, F. Xu, L. Wang, and B. Yakobson, “Unraveling the Sinuous Grain Boundaries in Graphene,” Advanced Functional Materials. 2015. link Times cited: 49 Abstract: Grain boundaries (GBs) in graphene are stable strings of pen… read moreAbstract: Grain boundaries (GBs) in graphene are stable strings of pentagon‐heptagon dislocations. The GBs have been believed to favor an alignment of dislocations, but increasing number of experiments reveal diversely sinuous GB structures whose origins have long been elusive. Based on dislocation theory and first‐principles calculations, an extensive analysis of the graphene GBs is conducted and it is revealed that the sinuous GB structures, albeit being longer than the straight forms, can be energetically optimal once the global GB line cannot bisect the tilt angle. The unusually favorable sinuous GBs can actually decompose into a series of well‐defined bisector segments that effectively relieve the in‐plane stress of edge dislocations, and the established atomic structures closely resemble recent experimental images of typical GBs. In contrast to previously used models, the sinuous GBs show improved mechanical properties and are distinguished by a sizable electronic transport gap, which may open potential applications of polycrystalline graphene in functional devices. read less USED (high confidence) J. Park and V. Prakash, “Thermal resistance across interfaces comprising dimensionally mismatched carbon nanotube-graphene junctions in 3D carbon nanomaterials,” Journal of Nanomaterials. 2014. link Times cited: 6 Abstract: In the present study, reverse nonequilibrium molecular dynam… read moreAbstract: In the present study, reverse nonequilibrium molecular dynamics is employed to study thermal resistance across interfaces comprising dimensionally mismatched junctions of single layer graphene floors with (6,6) single-walled carbon nanotube (SWCNT) pillars in 3D carbon nanomaterials. Results obtained from unit cell analysis indicate the presence of notable interfacial thermal resistance in the out-of-plane direction (along the longitudinal axis of the SWCNTs) but negligible resistance in the in-plane direction along the graphene floor. The interfacial thermal resistance in the out-of-plane direction is understood to be due to the change in dimensionality as well as phonon spectra mismatch as the phonons propagate from SWCNTs to the graphene sheet and then back again to the SWCNTs. The thermal conductivity of the unit cells was observed to increase nearly linearly with an increase in cell size, that is, pillar height as well as interpillar distance, and approaches a plateau as the pillar height and the interpillar distance approach the critical lengths for ballistic thermal transport in SWCNT and single layer graphene. The results indicate that the thermal transport characteristics of these SWCNT-graphene hybrid structures can be tuned by controlling the SWCNT-graphene junction characteristics as well as the unit cell dimensions. read less USED (high confidence) C. Chen, L. Shen, M. Ma, J. Z. Liu, and Q. Zheng, “Brownian motion-induced water slip inside carbon nanotubes,” Microfluidics and Nanofluidics. 2014. link Times cited: 3 USED (high confidence) M. Kawachi, Y. Kinoshita, and N. Ohno, “Effects of wavenumber and chirality on the axial compressive behavior of wavy carbon nanotubes: a molecular mechanics study,” Journal of Nanomaterials. 2014. link Times cited: 0 Abstract: The effects of wavenumber and chirality on the axial compres… read moreAbstract: The effects of wavenumber and chirality on the axial compressive behavior and properties of wavy carbon nanotubes (CNTs) with multiple Stone-Wales defects are investigated using molecular mechanics simulations with the adaptive intermolecular reactive empirical bond-order potential. The wavy CNTs are assumed to be point-symmetric with respect to their axial centers. It is found that the wavy CNT models, respectively, exhibit a buckling point and long wavelength buckling mode regardless of the wave numbers and chiralities examined. It is also found that the wavy CNTs have nearly the same buckling stresses as their pristine straight counterparts. read less USED (high confidence) R. Jayasena, “Few layers of graphene and carbon nanoscrolls by wedge based mechanical exfoliation.” 2014. link Times cited: 1 Abstract: Two-dimensional flat carbon sheets, commonly seen in graphit… read moreAbstract: Two-dimensional flat carbon sheets, commonly seen in graphite, are a much sought after material with interesting electronic and mechanical characteristics. It is expected to be used in the next generation microchips in lieu of silicon and also expected to first enter the commercial market in the form of conducting plastics and composites. Due to the increase in the number of such applications along with business opportunities, producing or isolating this layer of graphite cost-effectively is an urgent challenge to be addressed. Widespread efforts in this direction are focusing more on chemical methods to separate (from bulk graphite) or deposit (using epitaxial methods) this two-dimensional layer; such chemical methods not only are environmentally unfriendly, but also produce poor yield and can result in graphene layers with undesirable functional groups attached. One of the early methods, and still sometimes used today for research, of separating graphene from bulk graphite is by mechanical cleavage using a scotch tape. This method is known to produce high quality of graphene layers. However, this method is not reliable for mass manufacturing of graphene; the full potential for such mechanical methods remain to be explored. In this study, a novel method to synthesize carbon nano-sheets specially few layers of graphene from bulk graphite by mechanical exfoliation is presented. The method involves the use of an ultra-sharp single crystal diamond wedge to cleave highly or- read less USED (high confidence) Y. Chu, T. Ragab, and C. Basaran, “The size effect in mechanical properties of finite-sized graphene nanoribbon,” Computational Materials Science. 2014. link Times cited: 72 USED (high confidence) S. Zhu, J. Galginaitis, and T. Li, “Critical dispersion distance of silicon nanoparticles intercalated between graphene layers,” Journal of Nanomaterials. 2012. link Times cited: 5 Abstract: Nanocomposites of silicon nanoparticles (Si NPs) dispersed i… read moreAbstract: Nanocomposites of silicon nanoparticles (Si NPs) dispersed in between graphene layers emerge as potential anode materials of high-charge capacity for lithium-ion batteries. A key design requirement is to keep Si NPs dispersed without aggregation. Experimental design of the Si NP dispersion in graphene layers has remained largely empirical. Through extensive molecular dynamics simulations, we determine a critical NP dispersion distance as the function of NP size, below which Si NPs in between graphene layers evolve to bundle together. These results offer crucial and quantitative guidance for designing NP-graphene nanocomposite anode materials with high charge capacity. read less USED (high confidence) S. Hartmann, B. Wunderle, and O. Holck, “Pull-Out Testing of SWCNTs Simulated by Molecular Dynamics.” 2012. link Times cited: 12 Abstract: In this paper we present our results of simulating a pull-ou… read moreAbstract: In this paper we present our results of simulating a pull-out test of single walled carbon nanotubes (SWCNT) out of a single crystal gold lattice by means of molecular dynamics. We compare the obtained force-displacement data of the pullout test to results of simulated uniaxial tensile strain tests of SWCNTs. In doing so, we make a theoretical estimation about the quality of the clamping of SWCNTs in a gold crystal. We investigated the influence of chirality of SWCNTs and of the system temperature. Dependent on SWCNT chirality two different pull-out behaviours can be described. Zigzag nanotubes show stronger pull-out resistance than chiral or armchair nanotubes. Our results indicate a minor influence of embedding length of the SWCNT in the gold matrix on pull-out forces. The system temperature has only little effect on the maximum pull-out forces. The presented results have impact on design criteria of SWCNT-metal interfaces. read less USED (high confidence) F. Khademolhosseini, A. S. Phani, A. Nojeh, and N. Rajapakse, “Nonlocal Continuum Modeling and Molecular Dynamics Simulation of Torsional Vibration of Carbon Nanotubes,” IEEE Transactions on Nanotechnology. 2012. link Times cited: 60 Abstract: This paper investigates the size effects in the dynamic tors… read moreAbstract: This paper investigates the size effects in the dynamic torsional response of single-walled carbon nanotubes (SWCNTs) by developing a modified nonlocal continuum shell model. The purpose is to facilitate the design of devices based on CNT torsion by providing a simple, accurate, and efficient continuum model that can predict the frequency of torsional vibrations and the propagation speed of torsional waves. To this end, dispersion relations of torsional waves are obtained from the proposed nonlocal model and compared to classical models. It is seen that the classical and nonlocal models predict nondispersive and dispersive behavior, respectively. Molecular dynamics simulations of torsional vibrations of (6, 6) and (10, 10) SWCNTs are also performed, the results of which are compared with the classical and nonlocal models and used to extract consistent values of the nonlocal elasticity constant. The superiority and accuracy of the nonlocal elasticity model in predicting the size-dependent dynamic torsional response of SWCNTs are demonstrated. read less USED (high confidence) Z. Postawa, L. Rzeznik, R. Paruch, M. F. Russo, N. Winograd, and B. Garrison, “Depth profiling by cluster projectiles as seen by computer simulations,” Surface and Interface Analysis. 2011. link Times cited: 25 Abstract: Molecular dynamics computer simulations are used to probe th… read moreAbstract: Molecular dynamics computer simulations are used to probe the development of the surface morphology and the processes that determine the depth resolution in depth profiling experiments performed by secondary ion and neutral mass spectrometry (SIMS/SNMS). The Ag(111) surface is irradiated by an impact of 20‐keV Au3, C60 and Ar872 clusters that represent a broad range of cluster projectiles used in SIMS/SNMS experiments. Improvements in the simulation protocol including automation and optimal sample shape allow for at least 1000 consecutive impacts for each set of initial conditions. This novel approach allows to shrink the gap between single‐impact simulations and real experiments in which numerous impacts are used. Copyright © 2010 John Wiley & Sons, Ltd. read less USED (high confidence) M. Sammalkorpi, A. Krasheninnikov, A. Kuronen, K. Nordlund, and K. Kaski, “Irradiation-induced stiffening of carbon nanotube bundles,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2005. link Times cited: 58 USED (low confidence) X. Cai, H. Li, T. Ma, and Q. Wang, “Size effect on thermal transport performance of inserted Cu/Cu3Sn bilayer,” International Journal of Heat and Mass Transfer. 2024. link Times cited: 0 USED (low confidence) J. Singh and R. Kumar, “Mechanical and fracture behaviour of pristine and defective single/bi-crystal graphene/Ti nanocomposites using molecular dynamics simulations,” Computational Materials Science. 2024. link Times cited: 0 USED (low confidence) K. Abhikeern and A. Singh, “A consistent comparison of lattice thermal conductivities and phonon properties of single layer and bilayer graphene systems,” Journal of Applied Physics. 2023. link Times cited: 0 Abstract: Using nonequilibrium molecular dynamics (NEMD) based direct … read moreAbstract: Using nonequilibrium molecular dynamics (NEMD) based direct method and spectral energy density (SED) method, we calculate the size-dependent thermal conductivities (TCs) of single layer graphene (SLG), AB-stacked bilayer graphene (AB-BLG), and 21.78° twisted BLG (tBLG) in a robust and consistent manner. Our NEMD analysis reveals discrepancies in high TC reported for graphene systems in some of the earlier studies. Similarly, some of the previous SED based studies were done with unreliable SED Φ′ approach. We conduct size-dependent analysis of the graphene systems by the SED method for the first time and report that bulk TCs for SLG and tBLG systems are nearly the same when calculated by either the direct or the SED method. Contrary to studies that claim that phonon group velocities of AB-BLG and tBLG samples do not change, we find that although average group velocities in SLG and AB-BLG are almost the same, they are around 30% higher when compared to tBLG samples with different twist angles. On the other hand, average phonon lifetimes are almost similar for AB-BLG and 21.78° tBLG samples but around 43% lower than the average phonon lifetime of SLG. Together these trends suggest the reason behind the decreasing order of TCs across three systems. We also systematically study the basic phonon mode contributions to TCs and their properties and find that the high-symmetry modes contribute the most in all three systems. read less USED (low confidence) Z. Wang, H. Zhang, X. Sun, and Y. Huo, “Molecular dynamics study on the mechanical behavior of vertically aligned γ-graphdiyne-graphene heterostructures under tension,” Materials Today Communications. 2023. link Times cited: 0 USED (low confidence) M. Ding et al., “Reduction of Interlayer Interaction in Multilayer Stacking Graphene with Carbon Nanotube Insertion: Insights from Experiment and Simulation,” The Journal of Physical Chemistry C. 2023. link Times cited: 0 Abstract: The creation of multilayer graphene (Gr), while preserving t… read moreAbstract: The creation of multilayer graphene (Gr), while preserving the brilliant properties of monolayer Gr derived from its unique band structure, can expand the application field of Gr to the macroscale. However, the energy-favorable AB stacking structure in the multilayer Gr induces a strong interlayer interaction and alters the band structure. Consequently, the intrinsic properties of each monolayer are degraded. In this work, we insert carbon nanotubes (CNTs) as nanospacers to modulate the microstructure of multilayer stacking Gr. Nanospacers can increase the interlayer distance and reduce the interlayer interaction. The Gr/CNT stacking structure is experimentally fabricated using a dry transfer method in a layer-by-layer manner. Raman spectroscopy verifies the reduction in the interlayer interaction within the stacking structure. Atomic force microscopy shows an increase in the interlayer distance, which can explain the weakening of the interlayer interactions. The microstructure of the stacked Gr and CNTs is studied by molecular dynamics simulation to systematically investigate the effect of CNT insertion. We found that the distribution distance, size, and arrangement of the CNT can modulate the interlayer distance. These results will help us to understand and improve the properties of the composite systems consisting of Gr and CNTs. read less USED (low confidence) W. Zhang, Y. Zhang, S. Zhao, Y. Zhang, and J. Yang, “Ballistic impact induced wave propagation and dislocation of three-dimensional graphene origami/copper nanocomposites,” Composites Communications. 2023. link Times cited: 0 USED (low confidence) Y. Ding et al., “The microstructure evolution of graphene in nanoindentation G/WC-Co based on molecular dynamics simulation,” Diamond and Related Materials. 2023. link Times cited: 0 USED (low confidence) J. Li et al., “Mechanics and Crack Analysis of Irida Graphene Bilayer Composite: A Molecular Dynamics Study,” Journal of Composites Science. 2023. link Times cited: 0 Abstract: In this paper, we conducted molecular dynamics simulations t… read moreAbstract: In this paper, we conducted molecular dynamics simulations to investigate the mechanical properties of double-layer and monolayer irida graphene (IG) structures and the influence of cracks on them. IG, a new two-dimensional material comprising fused rings of 3-6-8 carbon atoms, exhibits exceptional electrical and thermal conductivity, alongside robust structural stability. We found the fracture stress of the irida graphene structure on graphene sheet exceeds that of the structure comprising solely irida graphene. Additionally, the fracture stress of bilayer graphene significantly surpasses that of bilayer irida graphene. We performed crack analysis in both IG and graphene and observed that perpendicular cracks aligned with the tensile direction result in decreased fracture stress as the crack length increases. Moreover, we found that larger angles in relation to the tensile direction lead to reduced fracture stress. Across all structures, 75° demonstrated the lowest stress and strain. These results offer valuable implications for utilizing bilayer and monolayer IG in the development of advanced nanoscale electronic devices. read less USED (low confidence) L. Yang, L. Feng, B. Liu, Q. Fang, and K. Zhou, “Seawater pervaporation through carbon honeycomb membrane: A molecular dynamics study,” Desalination. 2023. link Times cited: 0 USED (low confidence) Y. Ding et al., “Effect of shell thickness on mechanical behavior of Al/Ti core-shell nanowires during three-point bending and unloading,” Mechanics of Materials. 2023. link Times cited: 0 USED (low confidence) H. P. Lal, A. B.R., and D. Ghosh, “Prediction of nonlocal elasticity parameters using high-throughput molecular dynamics simulations and machine learning,” European Journal of Mechanics - A/Solids. 2023. link Times cited: 0 USED (low confidence) Y. Yang, J. Ma, J. Yang, and Y. Zhang, “Graphene/h-BN hybrid van der Waal structures with high strength and flexibility: a nanoindentation investigation,” Thin-Walled Structures. 2023. link Times cited: 0 USED (low confidence) P. Mouratidis, J. G. McHugh, and K. Jolley, “Modelling of partial basal dislocation dipoles in bilayer graphene and graphite,” Carbon. 2023. link Times cited: 0 USED (low confidence) C. Xu et al., “Damage mechanism and mechanical properties of carbon nanotubes induced by He2+ ion irradiation: Molecular dynamics simulations and experiments,” Diamond and Related Materials. 2023. link Times cited: 0 USED (low confidence) I. A. Muscati, F. A. Jahwari, T. Pervez, and M. Dorduncu, “Molecular dynamics investigation for mechanical and failure behaviors of carbon nanotube-reinforced functionally graded aluminum–copper nanocomposites,” Mechanics of Advanced Materials and Structures. 2023. link Times cited: 0 USED (low confidence) A. Mostafa, A. Weerasinghe, A. Ramasubramaniam, and D. Maroudas, “Response of interlayer-bonded bilayer graphene to shear deformation,” Journal of Applied Physics. 2023. link Times cited: 0 Abstract: We report results on the mechanical and structural response … read moreAbstract: We report results on the mechanical and structural response to shear deformation of nanodiamond superstructures in interlayer-bonded twisted bilayer graphene (IB-TBG) and interlayer-bonded graphene bilayers with randomly distributed individual interlayer C–C bonds (RD-IBGs) based on molecular-dynamics simulations. We find that IB-TBG nanodiamond superstructures subjected to shear deformation undergo a brittle-to-ductile transition (BDT) with increasing interlayer bond density (nanodiamond fraction). However, RD-IBG bilayer sheets upon shear deformation consistently undergo brittle failure without exhibiting a BDT. We identify, explain, and characterize in atomic-level detail the different failure mechanisms of the above bilayer structures. We also report the dependence of the mechanical properties, such as shear strength, crack initiation strain, toughness, and shear modulus, of these graphene bilayer sheets on their interlayer bond density and find that these properties differ significantly between IB-TBG nanodiamond superstructures and RD-IBG sheets. Our findings show that the mechanical properties of interlayer-bonded bilayer graphene sheets, including their ductility and the type of failure they undergo under shear deformation, can be systematically tailored by controlling interlayer bond density and distribution. These findings contribute significantly to our understanding of these 2D graphene-based materials as mechanical metamaterials. read less USED (low confidence) S. Qian, L. Qiu, Y. Zhu, Y. Ni, and Q. Tong, “Molecular Dynamics Simulations on Nanoscale Water Pump Driven by Asymmetric Mechanical Loads,” ACS Applied Nano Materials. 2023. link Times cited: 0 USED (low confidence) W. Yong, Z.-jie Wei, Y.-yang Liu, D.-qiang Wang, and Y.-zheng Cui, “A molecular dynamics investigation on CO2–H2O–CH4 surface tension and CO2–CH4–H2O–graphite sheet contact angles,” Frontiers in Energy Research. 2023. link Times cited: 0 Abstract: Introduction: We perform molecular dynamics (MD) simulations… read moreAbstract: Introduction: We perform molecular dynamics (MD) simulations of nanoscopic liquid water drops on a graphite substrate mimicking the carbon-rich pore surface in the presence of CH4/CO2 mixtures at temperatures in the range 300 K–473 K.Methods: The surface tension in MD simulation is calculated via virial expression, and the water droplet contact angle is obtained through a cylindric binning procedure.Results: Our results for the interfacial tension between water and methane as a function of pressure and for the interfacial tension between water and CH4/CO2 mixtures as a function of their composition agree well with the experimental and computational literature.Discussion: The modified Young’s equation has been proven to bridge the macroscopic contact angle and microscopic contact with the experimental literature. The water droplet on both the artificially textured surface and randomly generated surface exhibits a transition between the Wenzel and Cassie–Baxter states with increased roughness height, indicating that surface roughness enhances the hydrophobicity of the solid surface. read less USED (low confidence) S. Barman and S. Dey, “Probing the mechanical and deformation behaviour of CNT-reinforced AlCoCrFeNi high-entropy alloy – a molecular dynamics approach,” Molecular Simulation. 2023. link Times cited: 0 Abstract: ABSTRACT This present study investigates the mechanical and … read moreAbstract: ABSTRACT This present study investigates the mechanical and deformation behaviour of pristine and carbon nanotube (CNT)-reinforced AlCoCrFeNi high-entropy alloys (HEAs) using molecular dynamics (MD) simulations. The results reveal that an increase in the atomic fraction of Al in pristine AlCoCrFeNi HEAs leads to reduced mechanical behaviour. The mechanical behaviour of the pristine AlCoCrFeNi HEAs notably improves following CNT reinforcement, particularly when using CNT with higher chirality. As the chirality of the CNT increases from (6,6) to (15,15), Young's modulus, yield stress, and toughness of the (15,15) CNT-Al20CoCrFeNi HEA enhance by 17.34%, 29.44%, and 44.44% compared to the (6,6) CNT – Al20CoCrFeNi HEA. HEAs with lower Al fractions experience more substantial stress drops due to rapid structural changes. CNT reinforcement, particularly with higher chirality, decelerates this structural transformation, enhancing yield strength greatly. The analysis of the dislocation evolution revealed that the CNT-reinforced HEA exhibits higher dislocation density compared to the pristine HEA, indicating strain hardening from CNT reinforcement. Furthermore, examination of atomic shear strain reveals confined deformation along shear bands in CNT-reinforced HEAs, leading to the deformation and eventual fracture of CNTs. This study provides valuable insights for enhancing the mechanical behaviour of CNT-reinforced AlCoCrFeNi HEAs, aiding in their design and development. read less USED (low confidence) P. Shi et al., “Deformation response of highly stretchable and ductile graphene kirigami under uniaxial and biaxial tension,” Physical Review B. 2023. link Times cited: 0 USED (low confidence) X.-L. Li and J.-G. Guo, “Theoretical investigation on energy absorption of single-layer graphene under ballistic impact,” Thin-Walled Structures. 2023. link Times cited: 0 USED (low confidence) W. Sun, S. Xue, and J. Jiang, “Molecular dynamics study on the thermal conductivity and ballistic resistance of twisted graphene,” Computational Materials Science. 2023. link Times cited: 0 USED (low confidence) T. Panczyk and K. Nieszporek, “Formation of degraded LDPE surfaces using mechanical cleavage and shock compression analyzed by means of molecular dynamics simulations,” Computational Materials Science. 2023. link Times cited: 0 USED (low confidence) X. Liu, Y. Xu, J. Shi, Y. Zhu, S. Zhang, and H. A. Wu, “Anti-fatigue nanomechanics in the pre-cracked graphene-copper artificial nacre under cyclic tension,” Carbon. 2023. link Times cited: 0 USED (low confidence) H. Chen and L. Bai, “The Tribological Behaviors of Amorphous Carbon Under Water Lubrication Through the Bottom-Up Coarse-Grained Methods,” Tribology International. 2023. link Times cited: 0 USED (low confidence) Y. Yu, X. Zhang, and L. Bai, “Nanoindentation and scratching behaviors of diamond-like carbon films by coarse-grained molecular dynamics,” Diamond and Related Materials. 2023. link Times cited: 0 USED (low confidence) J. C. Jiménez-García, D. F. F. R. Flores, R. H. Acosta, M. I. Velasco, E. Franceschini, and M. M. Mariscal, “Water behavior at PEMFC triple phase boundary: Exploring ionomer and catalytic layer effects via molecular dynamic simulations and NMR experiments,” International Journal of Hydrogen Energy. 2023. link Times cited: 1 USED (low confidence) M. A. Torkaman-Asadi and M. A. Kouchakzadeh, “Fracture analysis of pre-cracked graphene layer sheets using peridynamic theory,” International Journal of Fracture. 2023. link Times cited: 1 USED (low confidence) A. Pan, W. Wang, J. Xie, H. Zhang, and S. Hao, “Molecular dynamics simulations of interface structure and deformation mechanisms in metal/ceramic composites under tension,” Mechanics of Materials. 2023. link Times cited: 1 USED (low confidence) E. Marazzi, A. Ghojavand, J. Pirard, G. Petretto, J.-C. Charlier, and G. Rignanese, “Modeling symmetric and defect-free carbon schwarzites into various zeolite templates,” Carbon. 2023. link Times cited: 0 USED (low confidence) Y.-C. Wu, J.-L. Shao, Y. Mei, X. Mu, and P. Chen, “Spall characteristics of three-dimensional graphene networks with embedded copper: A molecular dynamics study,” Mechanics of Materials. 2023. link Times cited: 0 USED (low confidence) X. Ye, M. Liu, X. Li, and X. Liu, “Study of interwall interaction during the pull separation of ultra-long double-walled carbon nanotubes under lateral loading,” Extreme Mechanics Letters. 2023. link Times cited: 0 USED (low confidence) X. Wang, R. Xu, M. Zhou, S. Matharage, Y. Zhou, and Z. Wang, “Effects of the graphene/metal interface on elastic properties of Cu and W matrices: Molecular dynamics simulation,” Mechanics of Materials. 2023. link Times cited: 0 USED (low confidence) S. Ajori and A. R. Eftekharfar, “Buckling behavior of T-carbon nanobeams and nanoplates: A molecular dynamics study,” Physica B: Condensed Matter. 2023. link Times cited: 0 USED (low confidence) K. Lin and Z. Wang, “Multiscale mechanics and molecular dynamics simulations of the durability of fiber-reinforced polymer composites,” Communications Materials. 2023. link Times cited: 1 USED (low confidence) D. D. Ram, M. A. S. M. Haniff, A. M. bin Hashim, and M. A. Mohamed, “Thermal Conductivity of Stacked Hexagonal Boron Nitride (hBN) and Graphene – A Molecular Dynamics Approach,” 2023 IEEE Regional Symposium on Micro and Nanoelectronics (RSM). 2023. link Times cited: 0 Abstract: Developing solutions to keep up with the needs of increased … read moreAbstract: Developing solutions to keep up with the needs of increased power output of contemporary microprocessors is an ongoing challenge in the electronics industry. As such, thermal interface materials, which act as a filler to smooth out the contact imperfections between heat source and heat sink have been an important area of research. Two‒dimensional (2D) materials may be a solution to having a material that has high thermal conductivity, flexibility, and a long service life. Although highly thermally conductive, the electrical conductivity graphene makes it unsuitable for use directly adjacent to the active layer in electronics. Hexagonal boron nitride (hBN) has attracted attention for use as an insulating layer due to its structural similarity to graphene with a lattice mismatch of only 1.8%. In this research, equilibrium molecular dynamics (EMD) via the Green‒Kubo (GK) method is used to calculate the thermal conductivity of a hexagonal boron nitride/graphene (hBN/Gr) heterostructure. It is thought that replacing the secondary hBN layer would increase the thermal conductivity of the structure. read less USED (low confidence) G. C. Otakandza‐Kandjani, P. Brault, M. Mikikian, A. Michau, and K. Hassouni, “Molecular dynamics approach for the calculation of the surface loss probabilities of neutral species in argon–methane plasma,” Plasma Processes and Polymers. 2023. link Times cited: 0 Abstract: Molecular dynamics simulations are carried out for calculati… read moreAbstract: Molecular dynamics simulations are carried out for calculating the surface loss probabilities of neutral species from an argon–methane plasma. These probabilities are the sum of the sticking and surface recombination probabilities. This study considers both the formation of reactive and nonreactive volatile species for evaluating recombination probabilities. Results show that stable species are reflected when hydrocarbon film starts growing on the surface. CH3 is mainly lost by surface recombination leading to the formation of volatile products while very little contributes to film growth. C2H has surface loss probability in agreement with the literature. While C2H loss is usually attributed to sticking on the surface, our results show that its main loss process is due to surface recombination. read less USED (low confidence) Z. Zhang, K. Cai, and L. Wang, “Configuration defects-induced energy loss of a self-shrinking nanonetwork under cyclic biaxial stretching-shrinking,” Computational Materials Science. 2023. link Times cited: 0 USED (low confidence) Y. Wang, Y. Ma, R. Zheng, L. Li, Y.-L. Chen, and B. Ding, “Microstructure of PyC dominates interfacial shear failure in SiCf/SiC composites: From localized sliding to uniform plasticity,” Composites Part A: Applied Science and Manufacturing. 2023. link Times cited: 1 USED (low confidence) A. Farzin, M. Etemadi, S. Mehran, and S. Rouhi, “Investigating the Mechanical Properties of Perfect and Defective Ψ-Graphene: A Molecular Dynamics Simulation,” Materials Today Communications. 2023. link Times cited: 1 USED (low confidence) S. Gao, H. Lang, H. Wang, X. Guo, and R. Kang, “Atomic understanding of elastic-plastic deformation and crack evolution for single crystal AlN during nanoscratch,” Ceramics International. 2023. link Times cited: 0 USED (low confidence) D. Li, H. Yang, L. Li, and P. Yang, “Numerical investigation of thermal conductivity of Cu/graphene/Cu interface,” Applied Physics Letters. 2023. link Times cited: 0 Abstract: The purpose of this work is to investigate the contribution … read moreAbstract: The purpose of this work is to investigate the contribution of in-plane and out-of-plane phonon modes to interface thermal conductivities (ITC) of the Cu/graphene/Cu interface through nonequilibrium molecular dynamics simulations. The proportions of the ITC of the in-plane and out-of-plane phonon modes in the pristine ITC are 1.1% and 99.3%, respectively. Defect engineering can change the coupling strength between in-plane and out-of-plane phonon modes. There is a strong coupling between the in-plane and the out-of-plane phonon mode when the defect concentration is lower than 3%. Phonon coupling has been transformed into weak interaction when the defect concentration is higher than 3%. The high defect concentration can suppress the coupling between in-plane and out-of-plane phonon modes. The results of the phonon density of states show that the out-of-plane phonons are mainly concentrated at low frequencies, and the in-plane phonons are mainly concentrated at high frequencies. This work helps to understand the mechanism of heat transfer of the graphene-based interface and provides theoretical guidance for the application of graphene-based interface nanodevices. read less USED (low confidence) J. Heo and J. Han, “Evaluation of mechanical properties of triple-junction-free polycrystalline graphene,” Nanotechnology. 2023. link Times cited: 0 Abstract: Although chemical vapor deposition (CVD) has emerged as an i… read moreAbstract: Although chemical vapor deposition (CVD) has emerged as an important method for producing large-scale and relatively high-quality graphene, CVD-grown graphene inherently contains grain boundaries (GBs), which degrade its mechanical properties. To compensate for these characteristics, various studies have been conducted to maintain the mechanically superior properties by controlling the density of defects and GBs. In this study, the mechanical properties of triple junction (TJ)-free polycrystalline graphene, which is expected to exhibit excellent properties, were investigated through molecular dynamics simulations because TJ is well-known as a crack nucleation site due to stress concentration. We adopted the phase-field crystal method to model CVD-grown graphene-containing TJ-free polycrystalline materials. From a series of numerical simulations, we found that the fracture strength increases as the density of the GB increases. This trend is consistent with that presented in a previous experimental study measured by nanoindentation. It was determined that the variation in the fracture strength is related to the discontinuous density of 5–7 pairs, which act as stress-concentration sites. Additionally, we observed that the fracture strength was higher than that of polycrystalline graphene with TJ. We believe that these results have a higher mechanical advantage compared to the low strength of TJs shown in previous studies and will be important for future structural reliability-based graphene applications. read less USED (low confidence) C. Chen et al., “The atomic structure evolution and strengthening mechanism in three-dimensional network graphene enhanced Cu: A molecular dynamics simulation,” Journal of Alloys and Compounds. 2023. link Times cited: 1 USED (low confidence) P. Wang, D. Zhou, H. Zhao, Y. Lin, A. Nie, and H. Wang, “Dislocation-mediated brittle-ductile transition of diamond under high pressure,” Diamond and Related Materials. 2023. link Times cited: 0 USED (low confidence) Y. Yu, X. Xie, and S. Tang, “Molecular dynamics investigation on seawater desalination mechanism driven by external pressure through porous graphene membranes,” Journal of Molecular Liquids. 2023. link Times cited: 0 USED (low confidence) A. A. Allahdadian and M. Mashayekhi, “Experimental and numerical study of mode I interlaminar behavior of carbon nanotube reinforced glass-epoxy composite: A multiscale approach,” Engineering Fracture Mechanics. 2023. link Times cited: 0 USED (low confidence) Y. Liu, R. Wang, L.-Y. Wang, J. Xia, C. Wang, and C. Tang, “Size- and Chirality-Dependent Structural and Mechanical Properties of Single-Walled Phenine Nanotubes,” Materials. 2023. link Times cited: 0 Abstract: Phenine nanotubes (PNTs) have recently been synthesized as a… read moreAbstract: Phenine nanotubes (PNTs) have recently been synthesized as a promising new one-dimensional material for high-performance electronics. The periodically distributed vacancy defects in PNTs result in novel semiconducting properties, but may also compromise their mechanical properties. However, the role of these defects in modifying the structural and mechanical properties is not yet well understood. To address this, we conducted systematic molecular dynamics simulations investigating the structural evolution and mechanical responses of PNTs under various conditions. Our results demonstrated that the twisting of linear carbon chains in both armchair and zigzag PNTs led to interesting structural transitions, which were sensitive to chiralities and diameters. Additionally, when subjected to tensile and compressive loading, PNTs’ cross-sectional geometry and untwisting of linear carbon chains resulted in distinct mechanical properties compared to carbon nanotubes. Our findings provide comprehensive insights into the fundamental properties of these new structures while uncovering a new mechanism for modifying the mechanical properties of one-dimensional nanostructures through the twisting–untwisting of linear carbon chains. read less USED (low confidence) L. Safina and K. Krylova, “Graphene Network with Ni and Al Nanoparticles as the Composite Precursor: Atomistic Simulation,” 2023 IEEE 24th International Conference of Young Professionals in Electron Devices and Materials (EDM). 2023. link Times cited: 0 Abstract: In this work, the method of fabrication of the composites ba… read moreAbstract: In this work, the method of fabrication of the composites based on a graphene network and metal nanoparticles (Ni and Al) by deformation-heat treatment is considered by molecular dynamics simulation. A graphene network filled with Al or Ni nanoparticles are considered to study the fabrication of the composites and their mechanical properties. The diameter of Ni and Al nanoparticle is 6.2 and 7.5 Å, while in the final composite state, the ratio of metal and carbon atoms in the graphene/Al and graphene/Ni systems are 8 and 7.7 at.%, respectively. It is shown that hydrostatic compression is an effective way to obtain graphene/metal composites. In the compressed structure (composite state) no pores are found since compression is conducted to the maximum possible density. It is found that the graphene/Ni composite has better mechanical properties in comparison with the graphene/Al composite. The enhanced mechanical properties of the graphene/Ni composite are explained by the formation of a graphene network of high strength with metal nanoparticles uniformly distributed over the graphene pores. It has been established, that in the graphene/Al composite, both during hydrostatic and uniaxial tension, due to its low cohesion energy with graphene, metal nanoparticles begin to coagulate, which is more energetically favorable. The larger Al nanoparticles that appear in the structure are the weak places of the composite, where the fracture of the composite occurs most easily. read less USED (low confidence) P. Polyakova and R. Murzaev, “Methodology for Calculation of Elastic Constants of Diamane by Molecular Dynamics,” 2023 IEEE 24th International Conference of Young Professionals in Electron Devices and Materials (EDM). 2023. link Times cited: 0 Abstract: A diamane, a hydroginated diamond layer, is an ultrathin fil… read moreAbstract: A diamane, a hydroginated diamond layer, is an ultrathin film with specific ph ysical an d mechanical properties. Molecular dynamics simulation is used to analyze the equilibrium states of the diamane and calculate its mechanical properties at different conditions. The methodology for the calculation of elastic constants of two-dimensional material by molecular dynamics is developed and applied to the calculation of stiffness and compliance constants of diamane. Two morphologies of diamane (D-AA and D-AB) are considered, but it is shown that morphology does not affect the stiffness and compliance constants. It is found that the size of the simulation box does not affect the values of stiffness and compliance constants of diamane. It is shown that the values of elastic constants are affected by the presence of hydrogen in the diamane structure. The elastic constants are almost not affected by the diamane morphology: constants for AA and AB diamane are very close. The proposed methodology can be further applied to various two-dimensional structures for the calculation of elastic constants. read less USED (low confidence) K. Potier, K. Ariskina, A. Obliger, and J.-M. Leyssale, “Molecular Simulation of Argon Adsorption and Diffusion in a Microporous Carbon with Poroelastic Couplings.,” Langmuir : the ACS journal of surfaces and colloids. 2023. link Times cited: 0 Abstract: Neglected for a long time in molecular simulations of fluid … read moreAbstract: Neglected for a long time in molecular simulations of fluid adsorption and transport in microporous carbons, adsorption-induced deformations of the matrix have recently been shown to have important effects on both sorption isotherms and diffusion coefficients. Here we investigate in detail the behavior of a recently proposed 3D-connected mature kerogen model, as a generic model of aromatic microporous carbon with atomic H/C ∼ 0.5, in both chemical and mechanical equilibrium with argon at 243 K over an extended pressure range. We show that under these conditions the material exhibits some viscoelasticity, and simulations of hundreds of nanoseconds are required to accurately determine the equilibrium volumes and sorption loadings. We also show that neglecting matrix internal deformations and swelling can lead to underestimations of the loading by up to 19% (swelling only) and 28% (swelling and internal deformations). The volume of the matrix is shown to increase up to about 8% at the largest pressure considered (210 MPa), which induces an increase of about 33% of both pore volume and specific surface area via the creation of additional pores, yet does not significantly change the normalized pore size distribution. Volume swelling is also rationalized by using a well-known linearized microporomechanical model. Finally, we show that self-diffusivity decreases with applied pressure, following an almost perfectly linear evolution with the free volume. Quantitatively, neglecting swelling and internal deformations tends to reduce the computed self-diffusivities. read less USED (low confidence) A. Sharma, S. Sharma, and S. Ajori, “Molecular dynamics simulation of the mechanical and thermal properties of phagraphene nanosheets and nanotubes: a review,” Journal of Materials Science. 2023. link Times cited: 0 USED (low confidence) B. Song, K. Cai, P. Jia, and Q. Qin, “A nanoscroll robustly formed by self-folding a γ-graphyne ribbon on a CNT,” Computational Materials Science. 2023. link Times cited: 0 USED (low confidence) J. Zhou, Y. Lu, C. Wang, D. Feng, H. Zhang, and Y. Li, “Molecular dynamics study of graphene-coated reinforced tribomechanical properties: Hard versus soft substrates,” Computational Materials Science. 2023. link Times cited: 1 USED (low confidence) B. Sardar, S. Singh, and P. Mahajan, “Influence of temperature and size of the projectile on perforation of graphene sheet under transverse impact using molecular dynamics,” Materials Today Communications. 2023. link Times cited: 1 USED (low confidence) C. Cui, D. Wang, L. Zhang, and M. Yang, “Molecular simulation on the desorption and extraction of methane in the slits with varying surface activity,” Chemical Physics. 2023. link Times cited: 0 USED (low confidence) O. Makinde and A. E. Makinde, “Thermal Analysis of a Reactive Variable Viscosity TiO2-PAO Nanolubricant in a Microchannel Poiseuille Flow,” Micromachines. 2023. link Times cited: 0 Abstract: This paper examines the flow structure and heat transfer cha… read moreAbstract: This paper examines the flow structure and heat transfer characteristics of a reactive variable viscosity polyalphaolefin (PAO)-based nanolubricant containing titanium dioxide (TiO2) nanoparticles in a microchannel. The nonlinear model equations are obtained and numerically solved via the shooting method with Runge–Kutta–Fehlberg integration scheme. Pertinent results depicting the effects of emerging thermophysical parameters on the reactive lubricant velocity, temperature, skin friction, Nusselt number and thermal stability criteria are presented graphically and discussed. It is found that the Nusselt number and thermal stability of the flow process improve with exothermic chemical kinetics, Biot number, and nanoparticles volume fraction but lessen with a rise in viscous dissipation and activation energy. read less USED (low confidence) S. Wang, C. Zhang, S. Chen, and Z. Peng, “Fracture strength and failure mechanism of graphene-containing grain boundaries and pores,” Nanotechnology. 2023. link Times cited: 0 Abstract: Grain boundaries and pores commonly manifest in graphene she… read moreAbstract: Grain boundaries and pores commonly manifest in graphene sheets during experimental preparation. Additionally, pores have been intentionally incorporated into graphene to fulfill specific functions for various applications. However, how does the simultaneous presence of pores and grain boundaries impact the mechanical properties of graphene? This paper establishes uniaxial tension models of single-layer graphene-containing pores and three types of experimentally observed. The effect of interaction between pores and grain boundaries on the fracture strength of graphene was studied respectively for three types of grain boundaries by employing molecular dynamics simulations and considering factors such as pore size, the distance between pores and grain boundaries, and loading angle. A competitive mechanism between the intrinsic strength of pristine graphene with grain boundaries (referred to as pristine GGBs), which varies with the loading angle and the fracture strength of graphene sheets with pores that changes with the size of the pores, governs the fracture strength and failure modes of GGBs with pores. When the former exceeds the latter, the fracture strength of GGBs with pores primarily depends on the size of the pores, and fractures occur at the edges of the pores. Conversely, when the former is lower, the fracture strength of GGBs with pores relies on the loading angle and the distance between pores and grain boundaries, leading to grain boundary rupture. If the two strengths are comparable, the failure modes are influenced by the distance between pores and grain boundaries as well as the loading angle. The findings further elucidate the impact of coexisting grain boundaries and pores on the fracture behavior of graphene, providing valuable guidance for the precise design of graphene-based devices in the future. read less USED (low confidence) R. Murzaev, K. Krylova, and J. Baimova, “Thermal Expansion and Thermal Conductivity of Ni/Graphene Composite: Molecular Dynamics Simulation,” Materials. 2023. link Times cited: 0 Abstract: In the present work, the thermal conductivity and thermal ex… read moreAbstract: In the present work, the thermal conductivity and thermal expansion coefficients of a new morphology of Ni/graphene composites are studied by molecular dynamics. The matrix of the considered composite is crumpled graphene, which is composed of crumpled graphene flakes of 2–4 nm size connected by van der Waals force. Pores of the crumpled graphene matrix were filled with small Ni nanoparticles. Three composite structures with different sizes of Ni nanoparticles (or different Ni content—8, 16, and 24 at.% Ni) were considered. The thermal conductivity of Ni/graphene composite was associated with the formation of a crumpled graphene structure (with a high density of wrinkles) during the composite fabrication and with the formation of a contact boundary between the Ni and graphene network. It was found that, the greater the Ni content in the composite, the higher the thermal conductivity. For example, at 300 K, λ = 40 W/(mK) for 8 at.% Ni, λ = 50 W/(mK) for 16 at.% Ni, and λ = 60 W/(mK) for 24 at.% Ni. However, it was shown that thermal conductivity slightly depends on the temperature in a range between 100 and 600 K. The increase in the thermal expansion coefficient from 5 × 10−6 K−1, with an increase in the Ni content, to 8 × 10−6 K−1 is explained by the fact that pure Ni has high thermal conductivity. The results obtained on thermal properties combined with the high mechanical properties of Ni/graphene composites allow us to predict its application for the fabrication of new flexible electronics, supercapacitors, and Li-ion batteries. read less USED (low confidence) S. Bertolini and A. Delcorte, “Reactive Molecular Dynamics Simulations of Lysozyme Desorption Under Ar Cluster Impact,” SSRN Electronic Journal. 2023. link Times cited: 3 USED (low confidence) I. A. Muscati, F. A. Jahwari, and T. Pervez, “Effect of CNT’s volume fraction on the mechanical properties of CNT reinforced Al/Cu alloy nanocomposite using molecular dynamics simulation,” Materials Today: Proceedings. 2023. link Times cited: 1 USED (low confidence) S. Mishra, P. P. Maware, V. Choyal, and S. I. Kundalwal, “Atomistic insights into the fracture mechanisms of Stone–Wales-defected CNTs under transversely isotropic loading,” The European Physical Journal Plus. 2023. link Times cited: 3 USED (low confidence) M. Curatolo and G. Salerno, “Holes interaction of a graphene membrane under pressure for water desalination,” Mechanics of Materials. 2023. link Times cited: 0 USED (low confidence) S. Hrabar, M. Kański, S. Louerdi, and Z. Postawa, “Effect of the kinetic energy on particle ejection process from carbon nanotubes bombarded by kilo-electron-volt C60,” Journal of Vacuum Science & Technology B. 2023. link Times cited: 0 Abstract: Molecular dynamics computer simulations are employed to inve… read moreAbstract: Molecular dynamics computer simulations are employed to investigate processes leading to particle ejection from single-wall carbon nanotubes bombarded by keV C60 projectiles. The effect of the primary kinetic energy, the incidence angle, and the nanotube diameter on the ejection process is studied. Armchair nanotubes with diameters of 3.26, 5.4, and 8.2 nm are tested. C60 projectiles bombard these targets with kinetic energy between 3 and 50 keV and the angle of incidence ranging between 0° and 75°. The particle ejection yield is a result of the interplay between the amount of kinetic energy available for breaking interatomic bonds, the size of the bombarded area, and the size and form of projectiles hitting this area. Much of the initial kinetic energy is dissipated in the nanotubes as waves, especially for low-energy impacts. Computer simulations are used to find the optimal conditions leading to the gentle ejection of unfragmented organic molecules adsorbed on nanotube substrates. This knowledge may be helpful in the potential application of nanotube substrates in secondary ion mass spectrometry or secondary neutral mass spectrometry. read less USED (low confidence) Y. Yang, S. Li, J. Zhao, C. Zhang, and N. Wei, “Thermal Conductivity of a Two-Dimensional Diamondene Sheet: A Molecular Study,” The Journal of Physical Chemistry C. 2023. link Times cited: 0 USED (low confidence) X. Li et al., “Theoretical superlubricity and its friction stability of amorphous carbon film induced by simple surface graphitization,” Applied Surface Science. 2023. link Times cited: 3 USED (low confidence) S. R. Maalouf and S. Vel, “Nonlinear elastic behavior of 2D materials using molecular statics and comparisons with first principles calculations,” Physica E: Low-dimensional Systems and Nanostructures. 2023. link Times cited: 2 USED (low confidence) J. Zhang and J. Zhou, “Tunable local piezopotential properties of zinc oxide nanowires grown by remote epitaxy,” Materials Science in Semiconductor Processing. 2023. link Times cited: 0 USED (low confidence) P. Polyakova and J. Baimova, “Mechanical Properties of Graphene Networks under Compression: A Molecular Dynamics Simulation,” International Journal of Molecular Sciences. 2023. link Times cited: 1 Abstract: Molecular dynamics simulation is used to study and compare t… read moreAbstract: Molecular dynamics simulation is used to study and compare the mechanical properties obtained from compression and tension numerical tests of multilayered graphene with an increased interlayer distance. The multilayer graphene with an interlayer distance two-times larger than in graphite is studied first under biaxial compression and then under uniaxial tension along three different axes. The mechanical properties, e.g., the tensile strength and ductility as well as the deformation characteristics due to graphene layer stacking, are studied. The results show that the mechanical properties along different directions are significantly distinguished. Two competitive mechanisms are found both for the compression and tension of multilayer graphene—the crumpling of graphene layers increases the stresses, while the sliding of graphene layers through the surface-to-surface connection lowers it. Multilayer graphene after biaxial compression can sustain high tensile stresses combined with high plasticity. The main outcome of the study of such complex architecture is an important step towards the design of advanced carbon nanomaterials with improved mechanical properties. read less USED (low confidence) A. Mostafa, A. Ramasubramaniam, and D. Maroudas, “Thermal conductivity of 2D diamond superstructures in interlayer-bonded twisted bilayer graphene,” Applied Physics Letters. 2023. link Times cited: 1 Abstract: We report results from a systematic analysis of thermal tran… read moreAbstract: We report results from a systematic analysis of thermal transport in 2D diamond superstructures in interlayer-bonded twisted bilayer graphene (IB-TBG) based on molecular-dynamics simulations. We find that the introduction of interlayer C–C bonds in these bilayer structures causes an abrupt drop in the thermal conductivity of pristine, non-interlayer-bonded bilayer graphene, while further increase in the interlayer C–C bond density (2D diamond fraction) leads to a monotonic increase in the thermal conductivity of the resulting superstructures with increasing 2D diamond fraction toward the high thermal conductivity of 2D diamond (diamane). We also find that a similar trend is exhibited in the thermal conductivity of interlayer-bonded graphene bilayers with randomly distributed individual interlayer C–C bonds (RD-IBGs) as a function of interlayer C–C bond density, but with the thermal conductivity of the IB-TBG 2D diamond superstructures consistently exceeding that of RD-IBGs at a given interlayer bond density. We analyze the simulation results employing effective medium and percolation theories and explain the predicted thermal conductivity dependence on interlayer bond density on the basis of lattice distortions induced in the bilayer structures as a result of interlayer bonding. Our findings demonstrate that the thermal conductivity of IB-TBG 2D diamond superstructures and RD-IBGs can be precisely tuned by controlling interlayer C–C bond density and have important implications for the thermal management applications of interlayer-bonded few-layer graphene derivatives. read less USED (low confidence) J. Cobeña-Reyes, T. Ye, and A. Martini, “Simulations of Subnanometer Scale Image Contrast in Atomic Force Microscopy of Self-Assembled Monolayers in Water,” Chemical & Biomedical Imaging. 2023. link Times cited: 0 Abstract: Achieving high-resolution images using dynamic atomic force … read moreAbstract: Achieving high-resolution images using dynamic atomic force microscopy (AFM) requires understanding how chemical and structural features of the surface affect image contrast. This understanding is particularly challenging when imaging samples in water. An initial step is to determine how well-characterized surface features interact with the AFM tip in wet environments. Here, we use molecular dynamics simulations of a model AFM tip apex oscillating in water above self-assembled monolayers (SAMs) with different chain lengths and functional groups. The amplitude response of the tip is characterized across a range of vertical distances and amplitude set points. Then relative image contrast is quantified as the difference of the amplitude response of the tip when it is positioned directly above a SAM functional group vs positioned between two functional groups. Differences in contrast between SAMs with different lengths and functional groups are explained in terms of the vertical deflection of the SAMs due to interactions with the tip and water during dynamic imaging. The knowledge gained from simulations of these simple model systems may ultimately be used to guide selection of imaging parameters for more complex surfaces. read less USED (low confidence) Y. Wang, Y. Zhang, R. Gover, J. Yang, and Y. Zhang, “Fracture resistance of graphene origami under nanoindentation,” Carbon. 2023. link Times cited: 5 USED (low confidence) T. Tran, T. Fang, and D.-Q. Doan, “Effects of surface defects on mechanical properties and fracture mechanism of gallium selenide/graphene heterostructure,” Mechanics of Materials. 2023. link Times cited: 0 USED (low confidence) J. Yang, Y. Wang, and K. Bi, “Spontaneous transport of nanodroplets in 2D nanochannels,” 2023 IEEE 6th Information Technology,Networking,Electronic and Automation Control Conference (ITNEC). 2023. link Times cited: 0 Abstract: Directional transport of droplets is crucial for industrial … read moreAbstract: Directional transport of droplets is crucial for industrial applications and chemical engineering processes, which has demonstrated considerable promise in several fields, such as microelectromechanical systems and sensor devices. Nevertheless, controlled directional transport of nanodroplets in a 2D nanochannel has yet to be studied. In this work, we report an approach to achieving a self-driven behavior of a nanodroplet in a 2D nanochannel via a strain gradient. Meanwhile, the effect on the movement speed of the nanodroplet of different channel parameters is studied, including the magnitude of the strain gradient, interlayer distance, and interlayer angle of the nanochannel. Furthermore, how the nanochannel materials affect spontaneous movement is also explored. These simulation results are highly expected to shed new light on the study of the directional transport of a nanodroplet and open a new avenue for research on heat dissipation in microelectromechanical systems. read less USED (low confidence) Y. Zhang, K. Koranteng, and Y. Yi, “Characterization of graphene reinforced 3C-SiC composite as a metal-free friction material using molecular dynamics simulation,” Computational Materials Science. 2023. link Times cited: 0 USED (low confidence) P. N. Babu, B. Gargeya, B. C. Ray, and S. Pal, “Atomistic insight of torsional behavior of CNT-nanocrystalline Al nanocomposites,” Diamond and Related Materials. 2023. link Times cited: 1 USED (low confidence) L. Safina and E. A. Rozhnova, “MOLECULAR DYNAMICS SIMULATION OF THE DEFORMATION BEHAVIOR OF THE GRAPHENE/Al COMPOSITE,” Journal of Structural Chemistry. 2023. link Times cited: 2 USED (low confidence) K. P. Karasev, D. Strizhkin, A. Titov, and P. Karaseov, “Molecular-Dynamics Simulation of Silicon Irradiation with 2–8 keV C60 Fullerene Ions,” Journal of Surface Investigation: X-ray, Synchrotron and Neutron Techniques. 2023. link Times cited: 1 USED (low confidence) J. S. Shim and H. Beom, “Atomistic Investigation on the Blocking Phenomenon of Crack Propagation in Cu Substrate Reinforced by CNT,” Nanomaterials. 2023. link Times cited: 2 Abstract: Recently, many researchers in the semiconductor industry hav… read moreAbstract: Recently, many researchers in the semiconductor industry have attempted to fabricate copper with carbon nanotubes for developing efficient semiconductor systems. In this work, tensile tests of a carbon-nanotube-reinforced copper specimen were conducted using the molecular statics method. The copper substrate utilized in the tensile tests had an edge half-crack, with the carbon nanotube located on the opposite side of the copper substrate. Subsequently, the effects of carbon nanotube radius were investigated. The mechanical properties of the copper/carbon nanotube composite were measured based on the simulation results, which indicated that the atomic behavior of the composite system exhibited the blocking phenomenon of crack propagation under tension. The fracture toughness of the composite system was measured using the Griffith criterion and two-specimen method, while the crack growth resistance curve of the system was obtained by varying the crack length. This study demonstrated that the mechanical reliability of copper can be improved by fabricating it with carbon nanotubes. read less USED (low confidence) M. Mahmud and B. H. Kim, “Atomic boundary position and steric effects on ion transport and separation through nanoporous graphene membrane,” Journal of Mechanical Science and Technology. 2023. link Times cited: 1 USED (low confidence) A. Pedrielli, M. Dapor, K. Gkagkas, S. Taioli, and N. Pugno, “Mechanical Properties of Twisted Carbon Nanotube Bundles with Carbon Linkers from Molecular Dynamics Simulations,” International Journal of Molecular Sciences. 2023. link Times cited: 3 Abstract: The manufacturing of high-modulus, high-strength fibers is o… read moreAbstract: The manufacturing of high-modulus, high-strength fibers is of paramount importance for real-world, high-end applications. In this respect, carbon nanotubes represent the ideal candidates for realizing such fibers. However, their remarkable mechanical performance is difficult to bring up to the macroscale, due to the low load transfer within the fiber. A strategy to increase such load transfer is the introduction of chemical linkers connecting the units, which can be obtained, for example, using carbon ion-beam irradiation. In this work, we investigate, via molecular dynamics simulations, the mechanical properties of twisted nanotube bundles in which the linkers are composed of interstitial single carbon atoms. We find a significant interplay between the twist and the percentage of linkers. Finally, we evaluate the suitability of two different force fields for the description of these systems: the dihedral-angle-corrected registry-dependent potential, which we couple for non-bonded interaction with either the AIREBO potential or the screened potential ReboScr2. We show that both of these potentials show some shortcomings in the investigation of the mechanical properties of bundles with carbon linkers. read less USED (low confidence) R. Kumar and A. Parashar, “Atomistic simulations of pristine and nanoparticle reinforced hydrogels: A review,” Wiley Interdisciplinary Reviews: Computational Molecular Science. 2023. link Times cited: 3 Abstract: Hydrogel is a three‐dimensional cross‐linked hydrophilic net… read moreAbstract: Hydrogel is a three‐dimensional cross‐linked hydrophilic network that can imbibe a large amount of water inside its structure (up to 99% of its dry weight). Due to their unique characteristics of biocompatibility and flexibility, it has found applications in diversified fields, including tissue engineering, drug delivery, biosensors, and agriculture. Even though hydrogels are widely used in the biomedical field, their lower mechanical strength still limits their application to its full potential. Hydrogels can be reinforced with organic, inorganic, and metal‐based nanofillers to improve their mechanical strength. Due to improved computational power, computational‐based techniques are emerging as a leading characterization technique for nanocomposites and hydrogels. In nanomaterials, atomistic description governs the mechanical strength and thermal behavior that realized atomistic level simulations as an appropriate approach to capture the deformation governing mechanism. Among atomistic simulations, the molecular dynamics (MD)‐based approach is emerging as a prospective technique for simulating neat and nanocomposite‐based hydrogels' mechanical and thermal behavior. The success and accuracy of MD simulation entirely depend on the force field. This review article will compile the force field employed by the research community to capture the atomistic interactions in different nanocomposite‐based hydrogels. This article will comprehensively review the progress made in the atomistic approach to study neat and nanocomposite‐based hydrogels' properties. The authors have enlightened the challenges and limitations associated with the atomistic modeling of hydrogels. read less USED (low confidence) Z. Luo and W. A. N. G. GAO, “Coupled Evolution of Sliding and Rolling of Carbon Nanotubes: Effect of Lattice Mismatch and Size,” The Journal of Physical Chemistry C. 2023. link Times cited: 0 USED (low confidence) L. Safina, E. A. Rozhnova, R. Murzaev, and J. Baimova, “Effect of Interatomic Potential on Simulation of Fracture Behavior of Cu/Graphene Composite: A Molecular Dynamics Study,” Applied Sciences. 2023. link Times cited: 4 Abstract: Interatomic interaction potentials are compared using a mole… read moreAbstract: Interatomic interaction potentials are compared using a molecular dynamics modeling method to choose the simplest, but most effective, model to describe the interaction of copper nanoparticles and graphene flakes. Three potentials are considered: (1) the bond-order potential; (2) a hybrid embedded-atom-method and Morse potential; and (3) the Morse potential. The interaction is investigated for crumpled graphene filled with copper nanoparticles to determine the possibility of obtaining a composite and the mechanical properties of this material. It is observed that not all potentials can be applied to describe the graphene–copper interaction in such a system. The bond-order potential potential takes into account various characteristics of the bond (for example, the angle of rotation and bond lengths); its application increases the simulation time and results in a strong interconnection between a metal nanoparticle and a graphene flake. The hybrid embedded-atom-method/Morse potential and the Morse potential show different results and lower bonding between graphene and copper. All the potentials enable a composite structure to be obtained; however, the resulting mechanical properties, such as strength, are different. read less USED (low confidence) T. Wang et al., “The mechanics and design of a local crystallization of amorphous for carbon material by molecular dynamics simulation,” Journal of Non-Crystalline Solids. 2023. link Times cited: 3 USED (low confidence) A. Narjabadifam and M. M. S. Fakhrabadi, “Graphyne-type nano-metamaterials: A comprehensive molecular dynamics simulation,” Diamond and Related Materials. 2023. link Times cited: 2 USED (low confidence) H. Tran and H. Chew, “Surface morphology and carbon structure effects on sputtering: Bridging scales between molecular dynamics simulations and experiments,” Carbon. 2023. link Times cited: 4 USED (low confidence) T. Panczyk, W. Płaziński, F. Dupradeau, A. Brzyska, and P. Wolski, “Interaction of Chondroitin and Hyaluronan Glycosaminoglycans with Surfaces of Carboxylated Carbon Nanotubes Studied Using Molecular Dynamics Simulations,” Molecules. 2023. link Times cited: 0 Abstract: Interaction of β-D-glucopyranuronic acid (GlcA), N-acetyl-β-… read moreAbstract: Interaction of β-D-glucopyranuronic acid (GlcA), N-acetyl-β-D-glucosamine (GlcNAc), N-acetyl-β-D-galactosamine (GalNAc) and two natural decameric glycosaminoglycans, hyaluronic acid (HA) and Chondroitin (Ch) with carboxylated carbon nanotubes, were studied using molecular dynamics simulations in a condensed phase. The force field used for carbohydrates was the GLYCAM-06j version, while functionalized carbon nanotubes (fCNT) were described using version two of the general amber force field. We found a series of significant differences in carbohydrate-fCNT adsorption strength depending on the monosaccharide molecule and protonation state of surface carboxyl groups. GlcNAc and GalNAc reveal a strong adsorption on fCNT with deprotonated carboxyl groups, and a slightly weaker adsorption on the fCNT with protonated carboxyl groups. On the contrary, GlcA weakly adsorbs on fCNT. The change in protonation state of surface carboxyl groups leads to the reversal orientation of GlcNAc and GalNAc in reference to the fCNT surface, while GlcA is not sensitive to that factor. Adsorption of decameric oligomers on the surface of fCNT weakens with the increasing number of monosaccharide units. Chondroitin adsorbs weaker than hyaluronic acid and incorporation of four Ch molecules leads to partial detachment of them from the fCNT surface. The glycan–fCNT interactions are strong enough to alter the conformation of carbohydrate backbone; the corresponding conformational changes act toward a more intensive contact of glycan with the fCNT surface. Structural and energetic features of the adsorption process suggest the CH-π interaction-driven mechanism. read less USED (low confidence) J. Zhou, J. Shen, W. Yue, Y. Liu, and Z. chen, “Molecular Dynamics Simulation of Reinforcement Mechanism of Graphene/Aluminum Composites and Microstructure Evolution,” SSRN Electronic Journal. 2023. link Times cited: 5 USED (low confidence) G. O. Kandjani, P. Brault, M. Mikikian, G. Tetard, A. Michau, and K. Hassouni, “Molecular dynamics simulations of reactive neutral chemistry in an argon‐methane plasma,” Plasma Processes and Polymers. 2022. link Times cited: 2 USED (low confidence) S. Liu, Y. Chen, and Y. Liu, “In-plane and interlayer mechanical behaviors of diamane superlattice generated in twisted bilayer graphene,” Journal of Applied Physics. 2022. link Times cited: 3 Abstract: Diamane superlattice generated by the interlayer bonding of … read moreAbstract: Diamane superlattice generated by the interlayer bonding of twisted bilayer graphene (IB-TBG) has attracted much attention thanks to its excellent properties inherited from bulk diamond, as well as the versatile modulation of physical and mechanical properties, which may open up novel electronic applications. In this work, we have systematically studied the in-plane and interlayer mechanical behaviors of IB-TBG through molecular dynamics simulations and theoretical analysis by considering different structural parameters, such as the twisted angle, stack pattern, and interlayer bonding density. It is found that interlayer bonding density plays a crucial role in determining the in-plane and interlayer shear mechanical properties of IB-TBG. Both the in-plane tensile modulus and strength follow the same linear attenuation relationship with interlayer bonding density for different twisted angles and stacked patterns, while the interlayer shear modulus increases with interlayer bonding density following the same power law, and the critical shear strain of failure linearly decreases with interlayer bonding density. Furthermore, two failure modes are observed under shear deformation, i.e., the failure of interlayer bonding (mode I) and fracture of graphene sheets (mode G). Then, theoretical prediction is carried out by considering the balance of in-plane tension and interlayer shear, which can identify the two failure modes well. The results presented herein yield useful insights for designing and tuning the mechanical properties of IB-TBG. read less USED (low confidence) A. Akhunova, L. Galiakhmetova, and J. Baimova, “The Effects of Dislocation Dipoles on the Failure Strength of Wrinkled Graphene from Atomistic Simulation,” Applied Sciences. 2022. link Times cited: 3 Abstract: This research paper studies the fracture and mechanical prop… read moreAbstract: This research paper studies the fracture and mechanical properties of rippled graphene containing dislocation dipoles. The atomistic simulation is performed to study the deformation behavior of pristine and defective wrinkled graphene. Graphene wrinkling considerably decreases the ultimate tensile strength of graphene with and without defects but increases the fracture strain. For graphene with the dislocation dipoles, temperature increase slightly affects mechanical properties, in contrast to graphene and graphene with Stone–Wales defect. The extremely similar slopes of the stress-strain curves for graphene with the dislocation dipoles with different arms imply that the distance between dislocations in the dipole does not have noticeable effects on the elastic modulus and strength of graphene. Defects in graphene can also affect its wrinkling; for example, preventing wrinkle formation. read less USED (low confidence) C. Li, J. Wang, Y. Sheng, L. Yang, and Y. Su, “The strain-dependent interfacial thermal resistance at graphene-silicon interface under various deformation conditions,” International Journal of Heat and Mass Transfer. 2022. link Times cited: 1 USED (low confidence) G. Wang, G. Zhao, J. Song, H. Wang, and Q. Ding, “Study on the nanoindentation of polytetrafluoroethylene filled with knitted graphene by MD simulations,” Computational Materials Science. 2022. link Times cited: 1 USED (low confidence) L. Yin, K. Zhang, R. Zhao, Y. Yang, S. Tang, and G. Liu, “Capillary Infiltration of Liquid Silicon in Carbon Nanotubes: A Molecular Dynamics Simulation,” SSRN Electronic Journal. 2022. link Times cited: 1 USED (low confidence) H. Huang, X. Huang, X.-B. Meng, and Z. Cheng, “Study on interfacial thermal resistance between single wall carbon nanotubes and nickel by molecular dynamics,” Journal of Physics: Conference Series. 2022. link Times cited: 1 Abstract: The interfacial thermal resistance of the nanocontact system… read moreAbstract: The interfacial thermal resistance of the nanocontact system of carbon nanotubes and nickel crystals was investigated using molecular dynamics. It was found that with the increase in temperature, the interface thermal resistance gradually increased. In addition, the interfacial thermal resistance also increases gradually with the increase of the contact distance. The ballistic transport of phonons is proposed to be the main reason for the interfacial thermal resistance in this case. read less USED (low confidence) N. Apkadirova, K. Krylova, and J. Baimova, “Effect of external pressure on the hydrogen storage capacity of a graphene flake: molecular dynamics,” Letters on Materials. 2022. link Times cited: 2 USED (low confidence) M. Valadkhani, S. Chen, F. Kowsary, G. Benenti, G. Casati, and S. M. V. Allaei, “Curvature and van der Waals interface effects on thermal transport in carbon nanotube bundles,” Scientific Reports. 2022. link Times cited: 0 USED (low confidence) N. Mousavi and J. Davoodi, “Molecular dynamics study of the penetration resistance of graphene woven fabrics membrane impacted by nanoparticles,” Computational Materials Science. 2022. link Times cited: 0 USED (low confidence) M. Li, Q. Guo, L. Chen, L. Li, H. Hou, and Y.-hong Zhao, “Microstructure and properties of graphene nanoplatelets reinforced AZ91D matrix composites prepared by electromagnetic stirring casting,” Journal of Materials Research and Technology. 2022. link Times cited: 70 USED (low confidence) S. Zhao, X. Zhang, Y. Ni, Q. Peng, and Y. Wei, “Anisotropic mechanical response of a 2D covalently bound fullerene lattice,” Carbon. 2022. link Times cited: 7 USED (low confidence) K. Cai, Z. Zhang, and L. Wang, “Energy evolution mechanism of nanonetwork from hydrogenated graphene scrolls,” Materials Today Communications. 2022. link Times cited: 1 USED (low confidence) Q. Ren et al., “Interfacial Damage of Bilayer Graphene Under Shear Deformation: Theory, Experiment, and Simulation,” Journal of the Mechanics and Physics of Solids. 2022. link Times cited: 1 USED (low confidence) H. Tian and B. Zhang, “Ballistic resistance of twisted bilayer graphene with interlayer sp3-bonding on SiC substrate,” Computational Materials Science. 2022. link Times cited: 2 USED (low confidence) H. Lyu, D. Feng, Y. Feng, and X. Zhang, “Enhanced thermal energy storage of sodium nitrate by graphene nanosheets: Experimental study and mechanisms,” Journal of Energy Storage. 2022. link Times cited: 2 USED (low confidence) A. Mokhalingam and S. Gupta, “Helical Single-Walled Carbon Nanotubes Under Mechanical and Electrostatic Loading,” SSRN Electronic Journal. 2022. link Times cited: 0 USED (low confidence) H. Li et al., “A comprehensive investigation of Thermal Conductivity in of Monolayer Graphene, Helical Graphene with different percentages of hydrogen atom: A molecular dynamics approach,” Colloids and Surfaces A: Physicochemical and Engineering Aspects. 2022. link Times cited: 5 USED (low confidence) S. Bhattacharyya, M. R. I. Islam, and P. Patra, “Multiscale modelling of fracture in graphene sheets,” Theoretical and Applied Fracture Mechanics. 2022. link Times cited: 1 USED (low confidence) C.-J. Park, F. Robinson, and D. Kim, “Effect of Layer Orientation and Pore Morphology on Water Transport in Multilayered Porous Graphene,” Micromachines. 2022. link Times cited: 0 Abstract: In the present work, the effects on water transport due to t… read moreAbstract: In the present work, the effects on water transport due to the orientation of the layer in the multilayered porous graphene and the different patterns formed when the layer is oriented to some degrees are studied for both circular and non-circular pore configurations. Interestingly, the five-layered graphene membrane with a layer separation of 3.5 Å used in this study shows that the water transport through multilayered porous graphene can be augmented by introducing an angle to certain layers of the multilayered membrane system. read less USED (low confidence) A. A. Allahdadian and M. Mashayekhi, “Experimental and numerical study of tensile behavior of carbon nanotube reinforced glass-epoxy composite: the multiscale approach,” Composite Structures. 2022. link Times cited: 3 USED (low confidence) T. Ito, H. Matsubara, D. Surblys, and T. Ohara, “Molecular dynamics study on the thermal conductivity of a single polyethylene chain: Strain dependence and potential models’ effect,” AIP Advances. 2022. link Times cited: 1 Abstract: The thermal conductivity of a single polymer chain, which is… read moreAbstract: The thermal conductivity of a single polymer chain, which is an important factor in the rational design of polymer-based thermal management materials, is strongly affected by the strain state of the chain. In the present study, using non-equilibrium molecular dynamics simulations, the thermal conductivity of a single polyethylene chain, representing a typical polymer chain, was calculated as a function of strain. To investigate the effect of different modeling of covalent bonds, the results were compared for reactive and non-reactive potential models, the AIREBO and NERD potentials, respectively. When the strain ε was as small as ε < −0.03, i.e., under slight compression, the thermal conductivity values were similar regardless of the potential model and increased with increasing strain. However, the two potential models showed qualitatively different behaviors for larger strains up to ε < 0.15: the thermal conductivity calculated by the non-reactive potential continually grows with increasing strain, whereas that by the reactive potential model is saturated. The analysis of internal stress and vibrational density of states suggested that the saturation behavior is due to the weakening of the covalent bond force as the C–C bond elongates, and thus, the result of the reactive model is likely more realistic. However, for ε > 0.1, the reactive potential also produced unphysical results due to the effect of the switching function, describing the formation and breaking of covalent bonds. The present results indicate that careful selection of the potential model and deformation range is necessary when investigating the properties of polymers under tensile strain. read less USED (low confidence) A. Abdolazizi, S. Chen, D. Golberg, and C. Yan, “Anisotropy of Two-Dimensional Materials Under Tension: A Molecular Dynamic Study Across Graphene, Hexagonal Boron Nitride and Molybdenum Disulphide,” SSRN Electronic Journal. 2022. link Times cited: 1 USED (low confidence) B. Song, B. Yang, C. Zhang, C. Wang, and S. Chen, “Temperature-dependent mechanical properties and the microscopic deformation mechanism of bilayer γ-graphdiyne under tension,” Nanotechnology. 2022. link Times cited: 2 Abstract: γ-graphdiyne (γ-GDY) is a new two-dimensional carbon allotro… read moreAbstract: γ-graphdiyne (γ-GDY) is a new two-dimensional carbon allotrope that has received increasing attention in scientific and engineering fields. The mechanical properties of γ-GDY should be thoroughly understood for realizing their practical applications. Although γ-GDY is synthesized and employed mainly in their bilayer or multilayer forms, previous theoretical studies mainly focused on the single-layer form. To evaluate the characteristics of the multilayer form, the mechanical properties of the bilayer γ-GDY (γ-BGDY) were tested under uniaxial tension using the molecular dynamics simulations. The stress–strain relation of γ-BGDY is highly temperature-dependent and exhibits a brittle-to-ductile transition with increasing temperature. When the temperature is below the critical brittle-to-ductile transition temperature, γ-BGDY cracks in a brittle manner and the fracture strain decreases with increasing temperature. Otherwise, it exhibits ductile characteristics and the fracture strain increases with temperature. Such a temperature-dependent brittle-to-ductile transition is attributed to the interlayer cooperative deformation mechanism, in which the co-rearrangement of neighboring layers is dominated by thermal vibrations of carbon atoms in diacetylenic chains. Furthermore, the brittle-to-ductile transition behavior of γ-BGDY is independent of loading direction and loading rate. The ultimate stress and Young’s modulus decrease at higher temperatures. These results are beneficial for the design of advanced γ-GDY-based devices. read less USED (low confidence) S. D. V. S. S. V. Siruvuri, H. Verma, B. Javvaji, and P. Budarapu, “Fracture strength of Graphene at high temperatures: data driven investigations supported by MD and analytical approaches,” International Journal of Mechanics and Materials in Design. 2022. link Times cited: 3 USED (low confidence) W. Toh, E. Y. Ang, T. Ng, R. Lin, and Z. Liu, “Antifouling Bilayer Graphene Slit Membrane for Desalination of Nanoplastic-Infested Seawater: A Molecular Dynamics Simulation Study.,” ACS applied materials & interfaces. 2022. link Times cited: 4 Abstract: It has been shown that the nanoplastic particles present in … read moreAbstract: It has been shown that the nanoplastic particles present in graphene membranes have a high tendency to cause fouling in them due to the high affinity between graphene and nanoplastic molecules. This poses a significant challenge for the use of graphene membranes for desalination. In this paper, we introduce a double-layer graphene slit membrane as a viable solution to significantly reduce fouling caused by the presence of nanoplastic particles in graphene membranes. The molecular dynamics (MD) simulations performed in this work show that when fouling occurs in a single-layer membrane, the presence of nanoplastics reduces the average permeability by close to 40%, from 1877 LMBH to 1148 LMBH, with a large standard deviation of 26% between runs. With the addition of the secondary membrane, the average permeability increases by 17%, with a significantly reduced standard deviation of 7%. These suggest that the secondary layer acts as a sacrificial shield, attracting the nanoplastic contaminants and preventing them from coming into close proximity with the primary membrane, thus preventing fouling at the primary rejection layer. Furthermore, due to the affinity of the nanoplastic particles with the secondary graphene membrane, this membrane design points toward an effective and efficient way of extracting nanoplastic particles for further analysis or processing. read less USED (low confidence) K. Bhowmik et al., “Influence of Carbon Nanotube Defects on the Elastic Modulus of Nanocomposite: Multiscale Simulation,” Journal of Materials Engineering and Performance. 2022. link Times cited: 0 USED (low confidence) B. S. Baboukani, A. Pitkar, Z. Ye, and P. Nalam, “Load‐Dependent Friction Hysteresis for Graphitic Surfaces in n‐Hexadecane,” Advanced Materials Interfaces. 2022. link Times cited: 3 Abstract: Sliding‐induced friction behavior of a single‐asperity silic… read moreAbstract: Sliding‐induced friction behavior of a single‐asperity silica probe against few‐layer (FL) graphene and bulk graphite is measured in the presence of n‐hexadecane using an atomic force microscope (AFM). The load‐dependent nanoscale friction measurements display friction hysteresis, i.e., higher friction forces during unloading of the contact than loading, at a given normal load. However, unlike hysteresis in friction of graphene measured in ambient, several unique trends are observed when the contact is immersed in n‐hexadecane. First, the friction hysteresis is measured up to a transition load and beyond which is found negligible; second, a similar behavior is observed on bulk graphite; and third, a friction strengthening of the contact persisted up to several nanometers. Quasi‐static force‐separation curves identify up to four layers of n‐hexadecane solvation layers on graphitic surfaces. Molecular dynamic simulations illustrate that the solvated n‐hexadecane molecules within the contact carry the probe load and determine the generated contact area, affecting friction hysteresis. Further, during AFM probe sliding, instead of a pucker, a molecular pile‐up of n‐hexadecane, in front of the tip is observed. These findings provide new perspectives on understanding of the dissipation mechanisms of graphene that predominantly are surrounded by structured liquid molecules. read less USED (low confidence) M. Sharifi and E. Heidaryan, “Thermal rectification in ultra-narrow hydrogen functionalized graphene: a non-equilibrium molecular dynamics study,” Journal of Molecular Modeling. 2022. link Times cited: 1 USED (low confidence) H. Rai et al., “Spatial Variation in Nanoscale Wear Behavior of Chemical Vapor Deposited Monolayer WS2,” Applied Surface Science. 2022. link Times cited: 2 USED (low confidence) S. Mishra and S. I. Kundalwal, “Topological defects embedded large-sized single-walled carbon nanotubes for hydrogen storage: A molecular dynamics study,” International Journal of Hydrogen Energy. 2022. link Times cited: 3 USED (low confidence) M. Eidani, H. Akbarzadeh, E. Mehrjouei, M. Abbaspour, S. Salemi, and H. Yaghoubi, “Thermal Stability and Melting Mechanism of Diamond Nanothreads: Insight from Molecular Dynamics Simulation,” Colloids and Surfaces A: Physicochemical and Engineering Aspects. 2022. link Times cited: 0 USED (low confidence) V. Kushch, “A Study of Thermodynamic and Elastic Properties of Nanosized Diamond Single Crystals by the Classical Molecular Dynamics Method,” Journal of Superhard Materials. 2022. link Times cited: 2 USED (low confidence) X. Yuan, B. Zhu, and Y. Wang, “Post-buckling evolution of compressed thin films adhered to rigid substrates,” International Journal of Mechanical Sciences. 2022. link Times cited: 2 USED (low confidence) X. Guo, X. Chen, J. Zhao, W. Zhou, and J. Wei, “Effect of the Addition of Graphene Nanoplatelets on the Thermal Conductivity of Rocket Kerosene: A Molecular Dynamics Study,” Materials. 2022. link Times cited: 0 Abstract: Rocket kerosene plays an important role in the regenerative … read moreAbstract: Rocket kerosene plays an important role in the regenerative cooling process of rocket thrust chambers. Its thermal conductivity determines the cooling efficiency and the tendency to coke in rocket kerosene engines. In this paper, graphene nanoplatelets (GNPs) were introduced into rocket kerosene to improve its thermal conductivity. Molecular dynamics simulation was used to investigate the thermal conductivity of the composite system and its underlying thermal conductivity mechanism. Firstly, by studying the effect of the mass fraction of GNPs, it was found that, when the graphene mass fraction increases from 1.14% to 6.49%, the thermal conductivity of the composite system increases from 4.26% to 17.83%, which can be explained by the percolation theory. Secondly, the influence of the size of GNPs on the thermal conductivity of the composite system was studied. Basically, the thermal conductivity was found to increase by increasing the aspect ratio of GNPs, indicating that GNPs with a higher aspect ratio are more conducive to improving the thermal conductivity of rocket kerosene. By carefully analyzing the effect of the size of GNPs on thermal conductivity, it was concluded that the thermal conduction enhancement by adding GNPs is determined by the combined effect of the percolation theory and the Brownian motion. The results of the temperature effect study showed that the ratio of thermal conductivity to rocket kerosene increased from 1.16 to 1.26 and from 1.07 to 1.11 for the composite systems, with graphene sizes of 41.18 Å × 64.00 Å and 24.14 Å × 17.22 Å in the temperature range of 293 K to 343 K, respectively. It is further proved that the Brownian motion of GNPs has a non-negligible effect on the thermal conductivity of the composite system. This work provides microscopic insights into the thermal conduction mechanism of GNPs in nanofluids and will offer practical guidance for improving the thermal conductivity of rocket kerosene. read less USED (low confidence) S. Chen, Q.-X. Bai, H. Wang, Y. Dou, and W. Guo, “Controlled growth of large-area monolayer graphene on Ni (110) facet: Insight from molecular dynamics simulation,” Physica E: Low-dimensional Systems and Nanostructures. 2022. link Times cited: 4 USED (low confidence) R. Zhang, S. Li, Y. Li, and M. Wang, “Controlled Mass Transportation on Nanotubes by Strain and Thermal Gradient: A Molecular Dynamics Study,” Journal of Nano Research. 2022. link Times cited: 1 Abstract: According to the motion style, a nanomotor can be classified… read moreAbstract: According to the motion style, a nanomotor can be classified into linear nanomotor and rotary nanomotor. Nanomotors, as the core components of nanomachine, have broad research prospects and applications. Here, a molecular dynamics method is used to simulate the linear nanomotor on a stretched carbon nanotube substrate. The results show that the nanomotor speed is well controlled by the temperature gradient, the axial strain of the substrate and the nanomotor size. When the nanomotor moves stably on the substrate carbon nanotube with a temperature difference of 200 K at both ends, the time required for the nanomotor to travel the same distance on the substrate carbon nanotube with 15% strain is about 62% longer than that without strain. The mechanism for the nanomotor movement and speed control is attributed to the thermophoretic force acting on the nanomotor. Specifically, the thermophoretic force increases with increasing substrate temperature gradient and decreases with increasing substrate strain. These results provide a novel method for controlling the speed of a nanomotor and inform nanomotor design and manufacture, as well as presenting a deeper understanding of the mechanism and movement law of the nanomotor. read less USED (low confidence) J. Mao, S. Liu, L. Li, and J. Chen, “Molecular Dynamic Simulation of Defective Graphene Nanoribbons for Tension and Vibration,” Nanomaterials. 2022. link Times cited: 1 Abstract: As deformation and defects are inevitable during the manufac… read moreAbstract: As deformation and defects are inevitable during the manufacture and service of graphene resonators, comprehensive molecular dynamic (MD) simulations are performed to investigate the vibrational properties of the defective single-layer graphene sheets (SLGSs) during tension. Perfect SLGSs, SLGSs with single vacancy, SLGSs with low-concentration vacancies, and SLGSs with high-concentration vacancies are considered, respectively. The frequencies of the perfect and defective SLGSs at different stretching stages are investigated in detail. The effects of different external forces are also taken into account to study the vibration properties of the defective SLGSs. Results show that the perfect and defective SLGSs both successively perform four stages, i.e., the elastic stage, the yield stage, the hardening stage, and the fracture stage during stretching, and the elastic properties of the SLGSs are insensitive to the vacancy defects, while the ultimate strain is noticeably reduced by the vacancies. The single vacancy has no effect on the vibration properties of SLGS, while the frequency decreases with the increasing vacancy concentration for SLGS at the elastic stage. The frequency of yielded SLGS with a certain vacancy concentration is almost constant even with a varying external force. read less USED (low confidence) M. A. Torkaman-Asadi and M. A. Kouchakzadeh, “Atomistic simulations of mechanical properties and fracture of graphene: A review,” Computational Materials Science. 2022. link Times cited: 14 USED (low confidence) J. F. Dethan, J. Yeo, M. Rhamdhani, and V. Swamy, “Thermal conductivities of hydrogen encapsulated boron nitride and hybrid boron nitride – carbon nanotubes using molecular dynamics simulations,” Materials Today Communications. 2022. link Times cited: 2 USED (low confidence) Y.-C. Wu, J. Shao, and H. Zhan, “Deformation and Damage Characteristics of Copper/Honeycomb-Graphene under Shock Loading,” International Journal of Mechanical Sciences. 2022. link Times cited: 7 USED (low confidence) D. Bedi, A. Sharma, S. Sharma, and S. Tiwari, “Molecular Dynamics Simulation of Carbon and Boron Nitride nanotubes: Tensile and Compressive Behavior,” IOP Conference Series: Materials Science and Engineering. 2022. link Times cited: 0 Abstract: In this paper, the mechanical properties of Carbon nanotubes… read moreAbstract: In this paper, the mechanical properties of Carbon nanotubes (CNTs) and Boron Nitride nanotubes (BNNTs) are studied systematically by using molecular dynamics simulations. CNTs are considered semi-metallic, whereas the BNNTs, of the large band gap, are considered to be insulators, regarding the difference in the electrical properties of CNTs and BNNTs; comparing the mechanical properties of both nanotubes offers great scientific significance for their prospective applications. The simulations were carried out with the help of a Large-scale atomic/molecular massively parallel simulator (LAMMPS) and were based on the Airebo and Tersoffs force fields for C-C interaction in CNTs and B-N interaction in BNNTs, respectively. Failure behavior of armchair and zigzag CNTs and BNNTs under tensile and compressive loading has been predicted and observed that for both the nanotubes the armchair nanotubes showed higher tensile and compressive strength as compared to zigzag nanotubes. The maximum tensile and compressive strength for CNTs is 205 GPa and 35.62 GPa respectively and for BNNTs are 159 GPa and 24.81 GPa respectively. CNTs are identified as axially stronger and stiffer than BNNTs for the same diameter under identical loading conditions. read less USED (low confidence) Z. Zhao, W. Guo, and Z. Zhang, “Room‐Temperature Colossal Elastocaloric Effects in Three‐Dimensional Graphene Architectures: An Atomistic Study,” Advanced Functional Materials. 2022. link Times cited: 5 Abstract: Solid‐state cooling exploits the thermal response of caloric… read moreAbstract: Solid‐state cooling exploits the thermal response of caloric materials when subjected to external physical fields and represents a promising alternative to conventional refrigeration technologies. However, existing caloric materials are often limited by relatively small caloric response and hysteresis issues rooted in first‐order structural transitions. Here, colossal and reversible elastocaloric effects near room temperature in superelastic graphene architectures are predicted by thermodynamic analysis and atomistic calculations. The estimated adiabatic temperature change can reach a value of 155 K under a compressive stress of 0.7 GPa in a wide temperature range of around 300 K, yielding outstanding elastocaloric strength and efficiency. More unique is that both cooling and warming can be realized in the materials by applying tensile and compressive strains to host conventional and inverse elastocaloric effects, respectively, with almost no fatigue behavior and hysteresis effect. Such unprecedented elastocaloric performance results from a strain‐induced large change in configurational entropy in the graphene architectures. These effects are potentially extendable to other superelastic nanomaterials and hence suggest new material settings for developing high‐performance solid‐state refrigerants. read less USED (low confidence) A. Belkin, V. Rudyak, and S. Krasnolutskii, “Molecular dynamics simulation of carbon nanotubes diffusion in water,” Molecular Simulation. 2022. link Times cited: 1 Abstract: ABSTRACT The present paper is devoted to the study of diffus… read moreAbstract: ABSTRACT The present paper is devoted to the study of diffusion of carbon nanotubes in water by molecular dynamics method. Two nanotube models were used, namely, 1D rigid rod and 3D (6, 6) armchair. The nanotube diameter was 0.818 nm, and their length ranged from 5.25 to 32.2 nm. Both translational and rotational diffusion coefficients were calculated. Besides, longitudinal and transverse diffusion was studied, and the corresponding diffusion coefficients were determined. The first of them was much larger than the second, and the difference reached two times. The average diffusion coefficients are relatively well described by the analytical dependences for rigid cylinders. The diffusion coefficients were calculated using Green–Kubo formula and Einstein relation. Relaxation of autocorrelation functions of nanotube velocity and angular velocity was systematically discussed for all cases. It is shown that this relaxation has two stages and the first stage is an exponential. The corresponding relaxation times were estimated. read less USED (low confidence) H. Zhang, J. Ma, Y. Zhang, and J. Yang, “Failure mechanism of graphene kirigami under nanoindentation,” Nanotechnology. 2022. link Times cited: 1 Abstract: Though graphene is the strongest material in nature, its int… read moreAbstract: Though graphene is the strongest material in nature, its intrinsic brittleness hinders its applications where flexibility is the key figure of merits. In this work, we report the enhanced flexibility of graphene under nanoindentation by using kirigami technique. Based on molecular dynamics simulations, we find that graphene kirigami designed at the optimal cut parameter can sustain more than 45% larger out-of-plane deformation than its pristine counterpart while the maximum impact load is reduced by 20% due to the flexible cut edges. This trade-off between flexibility and strength in a graphene kirigami can be overcome by adding a pristine graphene as a supporting substrate. This double-layer structure consisting of one graphene kirigami and one pristine graphene can stand the maximum impact load three times larger than the single-layer graphene kirigami but its maximum indentation depth is merely 8% smaller. Our simulation results provide useful insights into the failure mechanism of the graphene kirigami under nanoindentation and useful guidelines to enhancing the flexibility of graphene for its applications as protection materials. read less USED (low confidence) J. Zhang, “Compression-torsion coupling behaviours in double-helix nanofibers assembled from negatively curved nanographenes,” Computational Materials Science. 2022. link Times cited: 0 USED (low confidence) H. Ma et al., “Graphene-assisted wetting transition on grooved surfaces: A molecular dynamics study,” Computational Materials Science. 2022. link Times cited: 3 USED (low confidence) J. Feng, H. Yu, S. Ma, and S. Hao, “Influence of defects on the static and dynamic buckling behavior of single-wall carbon nanotubes via molecular dynamics method,” Materials Today Communications. 2022. link Times cited: 1 USED (low confidence) M. Amini, B. Azadegan, H. Akbarzadeh, and R. Gharaei, “Evaluation of interface thermal transport of Cu-Graphene nanocomposite under cascade overlaps and its effects on irradiation-induced defects,” Journal of Nuclear Materials. 2022. link Times cited: 3 USED (low confidence) K. Krylova, L. Safina, S. Shcherbinin, and J. Baimova, “Methodologyfor Molecular Dynamics Simulation of Plastic Deformation of a Nickel/Graphene Composite,” Materials. 2022. link Times cited: 6 Abstract: In this study, some features of molecular dynamics simulatio… read moreAbstract: In this study, some features of molecular dynamics simulation for evaluating the mechanical properties of a Ni/graphene composite and analyzing the effect of incremental and dynamic tensile loading on its deformation are discussed. A new structural type of the composites is considered: graphene network (matrix) with metal nanoparticles inside. Two important factors affecting the process of uniaxial tension are studied: tension strain rate (5 ×10−3 ps−1 and 5 ×10−4 ps−1) and simulation temperature (0 and 300 K). The results show that the strain rate affects the ultimate tensile strength under tension: the lower the strain rate, the lower the critical values of strain. Tension at room temperature results in lower ultimate tensile strength in comparison with simulation at a temperature close to 0 K, at which ultimate tensile strength is closer to theoretical strength. Both simulation techniques (dynamic and incremental) can be effectively used for such a study and result in almost similar behavior. Fabrication technique plays a key role in the formation of the composite with low anisotropy. In the present work, uniaxial tension along three directions shows a big difference in the composite strength. It is shown that the ultimate tensile strength of the Ni/graphene composite is close to that of pure crumpled graphene, while the ductility of crumpled graphene with metal nanoparticles inside is two times higher. The obtained results shed the light on the simulation methodology which should be used for the study of the deformation behavior of carbon/metal nanostructures. read less USED (low confidence) Z. Hu, D. Chen, S.-G. Kim, R. Chauhan, Y. Li, and L. Shao, “Effect of Stress on Irradiation Responses of Highly Oriented Pyrolytic Graphite,” Materials. 2022. link Times cited: 1 Abstract: The effect of stress on irradiation responses of highly orie… read moreAbstract: The effect of stress on irradiation responses of highly oriented pyrolytic graphite (HOPG) was studied by combing molecular dynamics (MD) simulation, proton irradiation, and Raman characterization. MD simulations of carbon knock-on at energies < 60 eV were used to obtain average threshold displacement energies (E¯d) as a function of strain ranging from 0 to 10%. Simulations at a higher irradiation energy of 2–5 keV were used to study the effect of strain on damage cascade evolution. With increasing tensile strain, E¯d was reduced from 35 eV at 0% strain to 31 eV at 10% strain. The strain-reduced E¯d led to a higher damage peak and more surviving defects (up to 1 ps). Furthermore, high strains induced local cleavage around the cavities, as one additional mechanism of damage enhancement. Experimentally, HOPG film was folded, and the folded region with the maximum tensile stress was irradiated by a 2 MeV proton beam. Raman characterization showed significantly enhanced D to G modes in comparison to the stress-free irradiation. Based on the strain dependence of E¯d and the Kinchin–Pease model, a formula for displacement estimation under different tensile strains is proposed. The stress effects need to be considered in graphite applications in a reactor’s harsh environment where both neutron damage and stress are present. read less USED (low confidence) M. Vaezi, H. N. Pishkenari, and A. Nemati, “Mechanism of the motion of nanovehicles on hexagonal boron-nitride: A molecular dynamics study,” Computational Materials Science. 2022. link Times cited: 4 USED (low confidence) J. Bian and L. Nicola, “Lubrication of rough copper with few-layer graphene,” Tribology International. 2022. link Times cited: 3 USED (low confidence) Y. Xu, Q. Cao, L. Li, X. Zhang, H. Li, and F. Huang, “Mechanical Response of Graphene with Nanopore under Nanoindentation via Molecular Dynamics Simulations,” Surfaces and Interfaces. 2022. link Times cited: 5 USED (low confidence) G. G. Vidable, R. González, F. Valencia, N. Amigo, D. Tramontina, and E. Bringa, “Simulations of plasticity in diamond nanoparticles showing ultrahigh strength,” Diamond and Related Materials. 2022. link Times cited: 8 USED (low confidence) S. Wu, Z. Xu, S. Tian, T. Luo, and G. Xiong, “Enhanced Water Evaporation under Spatially Gradient Electric Fields: A Molecular Dynamics Study,” Journal of Molecular Liquids. 2022. link Times cited: 1 USED (low confidence) A. Narjabadifam, B. Abazadeh, and M. M. S. Fakhrabadi, “Graphyne nano-spirals under tension: Effects of base structures on superelasticity and fracture mechanisms,” Mechanics of Materials. 2022. link Times cited: 2 USED (low confidence) M. Roshan, A. Akbarzadeh, S. Sadeghzadeh, and A. Maleki, “Tailoring the hardness of aluminum surface reinforced with graphene and C3N nanosheets,” Diamond and Related Materials. 2022. link Times cited: 1 USED (low confidence) Y. Zhou et al., “Investigation of Deformation and Fracture Mechanisms in Two-dimensional Gallium Telluride Multilayers Using Nanoindentation.” 2022. link Times cited: 0 Abstract: Two-dimensional (2D) materials possess great potential for f… read moreAbstract: Two-dimensional (2D) materials possess great potential for flexible devices, ascribing to their outstanding electrical, optical, and mechanical properties. However, their mechanical deformation property and fracture mechanism, which are inescapable in many applications like flexible optoelectronics, are still unclear or not thoroughly investigated due methodology limitations. In light of this, such mechanical properties and mechanisms are explored on example of gallium telluride (GaTe), a promising optoelectronic candidate with an ultrahigh photo-responsibility and a high plasticity within 2D family. Considering the driving force insufficient in atomic force microscopy (AFM)-based nanoindentation method, here the mechanical properties of both substrate-supported and suspended GaTe multilayers were systematically investigated through full-scale Berkovich-tip nanoindentation, micro-Raman spectroscopy, AFM, and scanning electron microscopy. An unusual concurrence of multiple pop-in and load-drop events in loading curve was observed. By further correlating to molecular dynamics calculations, this concurrence was unveiled originating from the interlayer sliding mediated layers-by-layers fracture mechanism within GaTe multilayers. The van der Waals force between GaTe multilayers and substrates was revealed much stronger than that between GaTe interlayers, resulting in the easy sliding and fracture of multilayers within GaTe. This work provides new insights into the deformation and fracture mechanisms of GaTe and other similar 2D multilayers in flexible applications. read less USED (low confidence) S. Khosravani, M. H. Sadr, E. Carrera, and A. Pagani, “Synthesis, experimental testing and multi-scale modelling of graphene foam/epoxy composite,” Mechanics of Advanced Materials and Structures. 2022. link Times cited: 14 Abstract: In this work, randomly three-dimensional graphene foam (RGF)… read moreAbstract: In this work, randomly three-dimensional graphene foam (RGF) is synthesized from the chemical reduction of graphene oxide solution in the self-assembly method. RGF/epoxy composite is then obtained by the RTM method. Tensile testing highlights the effect of RGF drying percentage on the composite and shows a 138% and 48% increase in the Young modulus and tensile strength compared to epoxy. Also, by considering representative unit cell (RUC), a multi-scale numerical method using finite element analysis based on Carrera Unified Formulation (CUF), and molecular dynamics (MD), are performed to obtain the mechanical properties of the RGF/epoxy composite material. read less USED (low confidence) Q. Che, S. Yang, and F. Wang, “Effect of channel wettability on the single‑file water transport in sub-nanometer channel,” Computational Materials Science. 2022. link Times cited: 1 USED (low confidence) J. Dai, D. Li, Y. He, S. Du, and J.-N. Li, “Pore-scale investigation on the multi-component gas adsorption and diffusion in carbon xerogel microporous structure using molecular simulation methods,” Microporous and Mesoporous Materials. 2022. link Times cited: 3 USED (low confidence) A. Edalatmanesh, M. Mahnama, F. Feghhi, and M. M. Mashhadi, “Mechanical characterization of reinforced vertically-aligned carbon nanotube array synthesized by shock-induced partial phase transition: insight from molecular dynamics simulations,” Journal of Physics: Condensed Matter. 2022. link Times cited: 1 Abstract: Despite intriguing mechanical properties of carbon nanotubes… read moreAbstract: Despite intriguing mechanical properties of carbon nanotubes (CNTs), vertically-aligned carbon nanotube (VACNT) array does not possess a high strength against compression along the CNT axis and also the loadings perpendicular to the CNT axis. Here in this study, shock compression is introduced as a means for partial phase transition (PPT) in the VACNT array to reinforce the structure against the mentioned loadings. Molecular dynamics simulations are exploited to investigate the synthesis of a novel nanostructure from a VACNT array with 10 nm long (5, 5) CNTs. Employing Hugoniostat method, shockwave pressures of 6.6 GPa and 55 GPa are extracted from Hugoniot curves as the instability limit and the PPT point, respectively. Coordination analysis reveals the nucleation of carbon atoms in sp3 hybridization while preserving the dominant nature of CNT due to the high percent of sp2 hybridization. Recovery of the shocked samples yields the final structure to be tested for mechanical characteristics. Tensile and compression tests on the samples reveal that for the shockwave pressures below the PPT point, an increase of the shock strength leads to higher compliance in the VACNT array. However, beyond the PPT point the novel nanostructure shows an extraordinary strong behavior against loading along all directions. read less USED (low confidence) S. Chen et al., “Control one-dimensional length of rectangular pore on graphene membrane for better desalination performance,” Nanotechnology. 2022. link Times cited: 3 Abstract: At present, there is a general contradiction between permeab… read moreAbstract: At present, there is a general contradiction between permeability and selectivity of reverse osmosis (RO) membranes for desalination; a membrane with higher water permeability will give a lower salt rejection or selectivity, and vice versa. In this work, single-layer nanoporous graphene is used as RO membrane to investigate the effects of pore shape to reduce this contradiction by molecular dynamics simulations. Two kinds of pores (round and rectangular pores) with different sizes are simulated. For round pore, although the water permeability increases with the increase of the pore size, the salt rejection rate drops rapidly. For rectangular pore, reasonable designed pore structure can achieve improved water permeability and high salt rejection of graphene membrane by keeping one-dimensional length (i.e. the width) of the pore less than the size of the hydrated ions and increasing the other dimensional length. The restriction of one dimension can prevent the passage of hydrated ions through the pore effectively. This ‘one-dimensional restriction’ provides a simple strategy for designing RO membrane with variable pore structures to obtain a better desalination performance. read less USED (low confidence) S. Zhao, Y. Zhang, J. Yang, and S. Kitipornchai, “Folded graphene reinforced nanocomposites with superior strength and toughness: A molecular dynamics study,” Journal of Materials Science & Technology. 2022. link Times cited: 14 USED (low confidence) B. Zhao, Y. Zhang, Y. Fan, X. Yu, Z. Zhang, and B. Zhang, “The three-body abrasive tribological characteristics of the Graphene/h-BN heterostructure film considering defects,” Tribology International. 2022. link Times cited: 8 USED (low confidence) Y. Su, B. Yang, Q. Wei, and N. Hu, “Atomic-scale mechanical behaviors of polycrystalline graphene under biaxial loadings and high temperature,” Ceramics International. 2022. link Times cited: 3 USED (low confidence) Z. Zhang, K. Xu, Y. Lin, X. Cao, and J. Wu, “Simultaneous stiffening and strengthening of nanodiamond by fivefold twins,” MRS Bulletin. 2022. link Times cited: 4 Abstract: Cyclic fivefold twinning in metallic systems was shown to ef… read moreAbstract: Cyclic fivefold twinning in metallic systems was shown to effectively improve the mechanical strength and stiffness, but this remains unknown yet for strong covalent diamond. Here, tensile properties of fivefold twinned nanodiamonds (5FTNDs) are investigated for the first time via classic molecular dynamic simulations. It is predicted that mechanical properties of the nanodiamonds are greatly dominated by fivefold twins and cross-sectional geometry. 5FTNDs with star-shaped cross section exhibit superior tensile Young’s modulus and strength over their intrinsically strong bulk counterpart; however, pentagon-shaped 5FTNDs are tensile softer and weaker than their bulk counterpart. Moreover, with reduction in the axial radial size, tensile Young’s modulus and strength of star-shaped 5FTNDs are nonlinearly enhanced, but are mechanically degraded for pentagon-shaped 5FTNDs. Such geometry-induced conflict tensile properties are explained by the contour maps of residual stresses, stiffnesses, and strengths over the transverse cross section. The discovery provides a step forward in the search for superstrong/stiff covalent structures. Twinning boundaries (TBs) have been regarded as an effective way in improving the mechanical properties of metallic materials because energy-favorable TBs suppress the nucleation and motion events of dislocations. Recently, it was revealed that high-density TBs produce unprecedented mechanical hardness of covelent-bonded diamond up to 200 GPa. To date, it is still pending as to if fivefold TBs are able to strengthen and stiffen intrinsically strong diamond, although fivefold TBs have been shown to be a more effective way in enhancing the mechanical properties of metallic systems than lamellar TBs. The present work uses classic molecular dynamics simulations to show that star-shaped nanodiamond with fivefold TBs are mechanically stiffer and stronger than their bulk counterpart, and the enhancement in mechanical properties becomes more pronounced with decreasing the dimension of cross section. The work provides a new way in the design of mechanically stronger covalent diamond. read less USED (low confidence) T. Wavrunek, Q. Peng, and N. Abu-Zahra, “Mechanical Properties and Buckling of Kagome Graphene under Tension: A Molecular Dynamics Study,” Crystals. 2022. link Times cited: 2 Abstract: Kagome graphene is a carbon allotrope similar to graphene, w… read moreAbstract: Kagome graphene is a carbon allotrope similar to graphene, with a single-atom thickness and a co-planar atomic structure. Despite interesting electronic properties, its mechanical behavior is still elusive. We have investigated the tensile properties of Kagome graphene under various strain rates and finite temperatures using molecular dynamics simulations. The Young’s modulus, ultimate tensile strength, fracture strain, and fracture toughness of the unsupported bulk material were measured as 96 GPa, 43 GPa, 0.05, and 1.9 J m−3, respectively, at room temperature and a strain rate of 109 s−1. Two deformation-stages were observed under tensile loading: normal and wrinkled. Initially, the Kagome graphene system stays in a co-planar structure without wrinkling until the tensile strain reaches 0.04, where it starts to wrinkle, unlike graphene. The wrinkle wavelength and magnitude suggest a very low bending rigidity, and wrinkle formation does not follow a rate predicted by continuum mechanics. Furthermore, the fracture mechanism of wrinkled Kagome graphene is briefly discussed. read less USED (low confidence) M. Monteferrante, A. Tiribocchi, S. Succi, D. Pisignano, and M. Lauricella, “Capturing Free-Radical Polymerization by Synergetic Ab Initio Calculations and Topological Reactive Molecular Dynamics,” Macromolecules. 2022. link Times cited: 3 Abstract: Photocurable polymers are used ubiquitously in 3D printing, … read moreAbstract: Photocurable polymers are used ubiquitously in 3D printing, coatings, adhesives, and composite fillers. In the present work, the free radical polymerization of photocurable compounds is studied using reactive classical molecular dynamics combined with a dynamical approach of the nonequilibrium molecular dynamics (D-NEMD). Different concentrations of radicals and reaction velocities are considered. The mechanical properties of the polymer resulting from 1,6-hexanediol dimethacrylate systems are characterized in terms of viscosity, diffusion constant, and activation energy, whereas the topological ones through the number of cycles (polymer loops) and cyclomatic complexity. Effects like volume shrinkage and delaying of the gel point for increasing monomer concentration are also predicted, as well as the stress–strain curve and Young’s modulus. Combining ab initio, reactive molecular dynamics, and the D-NEMD method might lead to a novel and powerful tool to describe photopolymerization processes and to original routes to optimize additive manufacturing methods relying on photosensitive macromolecular systems. read less USED (low confidence) X. Liu, P. Yu, and C. Lu, “Mechanical property and thermal conductivity of pentadiamond: A comprehensive molecular dynamics study,” Computational Materials Science. 2022. link Times cited: 2 USED (low confidence) J. Li, Y. Peng, X. Tang, Z. Yang, C. Chen, and L. Bai, “Load-oriented thickness-dependent friction behavior of graphene supported by substrate with different stiffnesses,” Computational Materials Science. 2022. link Times cited: 3 USED (low confidence) Y. Tomioka, T. Natsuki, J.-X. Shi, and X. Lei, “Theoretical Evaluation of Impact Characteristics of Wavy Graphene Sheets with Disclinations Formed by Origami and Kirigami,” Nanomaterials. 2022. link Times cited: 1 Abstract: Evaluation of impact characteristics of carbon nanomaterials… read moreAbstract: Evaluation of impact characteristics of carbon nanomaterials is very important and helpful for their application in nanoelectromechanical systems (NEMS). Furthermore, disclination lattice defects can generate out-of-plane deformation to control the mechanical behavior of carbon nanomaterials. In this study, we design novel stable wavy graphene sheets (GSs) using a technique based on origami and kirigami to control the exchange of carbon atoms and generate appropriate disclinations. The impact characteristics of these GSs are evaluated using molecular dynamics (MD) simulation, and the accuracy of the simulation results is verified via a theoretical analysis based on continuum mechanics. In the impact tests, the C60 fullerene is employed as an impactor, and the effects of the different shapes of wavy GSs with different disclinations, different impact sites on the curved surface, and different impact velocities are examined to investigate the impact characteristics of the wavy GSs. We find that the newly designed wavy GSs increasingly resist the kinetic energy (KE) of the impactor as the disclination density is increased, and the estimated KE propagation patterns are significantly different from those of the ideal GS. Based on their enhanced performance in the impact tests, the wavy GSs possess excellent impact behavior, which should facilitate their potential application as high-impact-resistant components in advanced NEMS. read less USED (low confidence) M. Dewapriya and R. Miller, “Molecular dynamics study on the shock induced spallation of polyethylene,” Journal of Applied Physics. 2022. link Times cited: 3 USED (low confidence) Y. Hu, S. Zhang, P. Huang, and F. Wang, “Dislocation re-emission induced staged work hardening in graphene-nanotwin reinforced Cu: A molecular dynamics simulation study,” Proceedings of the Institution of Mechanical Engineers, Part L: Journal of Materials: Design and Applications. 2022. link Times cited: 2 Abstract: Graphene and nanotwins are two effective reinforced microstr… read moreAbstract: Graphene and nanotwins are two effective reinforced microstructural features to achieve improved mechanical properties of metallic composites, while the two features are generally applied separately. In this study, graphene/nano-twinned Cu nanocomposites models with different arrangement of the graphene and twin boundaries were designed by using molecular dynamics (MD) simulations, and the dislocation processes and the interactions between dislocation and graphene/twin were simulated and investigated. The simulation results indicated the arrangement of graphene and nanotwin affects the work hardening behaviors in the graphene/nano-twinned Cu composites, i.e., two staged work hardening behavior corresponded to cyclic process of dislocation hindrance-absorption-reemission in the model with relatively small twin spacing and twin-graphene spacing, while the work hardening dominated by dislocation intersection and multiplication occurred in the model with large twin-spacing. The simulation provided herein demonstrated that the special arrangement of graphene and nanotwins led a way to tailoring the mechanical properties of metallic composites with various work hardening behaviors. Graphical abstract Highlights 1. Dislocation reactions between twins and graphene were simulated and analyzed. 2. Twin-graphene distance and the twin distance play key roles in the reaction. 3. The mechanism corresponding to work hardening changes in the limited two distances. read less USED (low confidence) K. Shi et al., “Hydrogen permeation behavior and mechanism of multi-layered graphene coatings and mitigation of hydrogen embrittlement of pipe steel,” Applied Surface Science. 2022. link Times cited: 22 USED (low confidence) L. Sang, N. Sugimura, and H. Washizu, “Graphene as solid lubricant vertically buried into iron contact surface by annealing for superlubricity,” Tribology International. 2022. link Times cited: 15 USED (low confidence) X. Wu, R. Yang, X. Chen, and W. Liu, “Fabrication of Nanopore in MoS2-Graphene vdW Heterostructure by Ion Beam Irradiation and the Mechanical Performance,” Nanomaterials. 2022. link Times cited: 7 Abstract: Nanopore structure presents great application potential espe… read moreAbstract: Nanopore structure presents great application potential especially in the area of biosensing. The two-dimensional (2D) vdW heterostructure nanopore shows unique features, while research around its fabrication is very limited. This paper proposes for the first time the use of ion beam irradiation for creating nanopore structure in 2D vdW graphene-MoS2 heterostructures. The formation process of the heterostructure nanopore is discussed first. Then, the influence of ion irradiation parameters (ion energy and ion dose) is illustrated, based on which the optimal irradiation parameters are derived. In particular, the effect of stacking order of the heterostructure 2D layers on the induced phenomena and optimal parameters are taken into consideration. Finally, uniaxial tensile tests are conducted by taking the effect of irradiation parameters, nanopore size and stacking order into account to demonstrate the mechanical performance of the heterostructure for use under a loading condition. The results would be meaningful for expanding the applications of heterostructure nanopore structure, and can arouse more research interest in this area. read less USED (low confidence) B. Yang, B. Song, C. Zhang, and S. Chen, “Temperature-dependent brittle-ductile transition of α-graphyne nanoscroll and its micromechanism,” Carbon. 2022. link Times cited: 4 USED (low confidence) S. Nasiri and M. Zaiser, “Effects of elasticity and dislocation core structure on the interaction of dislocations with embedded CNTs in Aluminium: An atomistic simulation study.,” Materialia. 2022. link Times cited: 8 USED (low confidence) H. Nagaya, J. Cho, and T. Hori, “Thermal conductivity of single-walled carbon nanotubes under torsional deformation,” Journal of Applied Physics. 2021. link Times cited: 0 USED (low confidence) K. Li et al., “Thermal behaviour, kinetics and mechanisms of CO2 interactions with graphene: An atomic scale reactive molecular dynamic study,” Chemical Engineering Journal. 2021. link Times cited: 11 USED (low confidence) X. Long, Y. Tang, W. Zhang, G. Wang, and W. Zhao, “Effect of grain boundaries on elastic shock wave in graphene,” Computational Materials Science. 2021. link Times cited: 2 USED (low confidence) L. Shi et al., “Phonon thermal transport in diamond and lonsdaleite: A comparative study of empirical potentials,” Diamond and Related Materials. 2021. link Times cited: 3 USED (low confidence) S. Chen, D. Seveno, and L. Gorbatikh, “Multiscale modeling and maximizing the thermal conductivity of Polyamide-6 reinforced by highly entangled graphene flakes,” Composites Part A: Applied Science and Manufacturing. 2021. link Times cited: 5 USED (low confidence) Q. Anjam, F. Hussain, M. Imran, and N. Amin, “Investigations of thermal and mechanical properties of graphene-silver nanocomposites: a molecular dynamics study,” Molecular Simulation. 2021. link Times cited: 0 USED (low confidence) K. Xiao, Q. Yin, X. Wu, and C. Huang, “Mechanical behavior of single-layer graphdiyne via supersonic micro-projectile impact,” Nano Materials Science. 2021. link Times cited: 2 USED (low confidence) D. Bedi, S. Sharma, and S. Tiwari, “Effect of chirality and defects on tensile behavior of carbon nanotubes and graphene: Insights from molecular dynamics,” Diamond and Related Materials. 2021. link Times cited: 7 USED (low confidence) K. Lin and T. Yu, “Debonding simulation of fibre-matrix interfaces of FRP composites with reactive force field,” Construction and Building Materials. 2021. link Times cited: 10 USED (low confidence) N. Pliatsikas et al., “Energetic bombardment and defect generation during magnetron-sputter-deposition of metal layers on graphene,” Applied Surface Science. 2021. link Times cited: 5 USED (low confidence) S. Weng, Z. Fang, Y. Zhao, T. Fu, and X. Peng, “Molecular Dynamics Studies on Size Effects in Laminated Polycrystalline Graphene/Copper Composites: Implications for Mechanical Behavior,” ACS Applied Nano Materials. 2021. link Times cited: 11 USED (low confidence) Y. Kumar, S. Sahoo, and A. Chakraborty, “Mechanical properties of graphene, defective graphene, multilayer graphene and SiC-graphene composites: A molecular dynamics study,” Physica B-condensed Matter. 2021. link Times cited: 19 USED (low confidence) W. Nishad, S. Subbiah, and N. Swaminathan, “A qualitative understanding of high intensity mechanical shearing and exfoliation of graphite nanoplatelets in a three-body contact using molecular dynamic simulations,” Journal of Manufacturing Processes. 2021. link Times cited: 1 USED (low confidence) H. Zou, Y. Feng, L. Qiu, and X. Zhang, “Thermal conductance control of non-bonded interaction between loaded halogen molecules and carbon nanotubes: A molecular dynamics study,” International Journal of Heat and Mass Transfer. 2021. link Times cited: 5 USED (low confidence) N. V. Maksyuta, V. Vysotskii, S. Efimenko, Y. V. Martysh, D. N. Maksyuta, and A. Sabirov, “Study of the Channeling of Inert Atoms in Nonchiral Carbon Nanotubes in the Absence and Presence of Inelastic Scattering,” Journal of Surface Investigation: X-ray, Synchrotron and Neutron Techniques. 2021. link Times cited: 0 USED (low confidence) J. Liu, X. Zhang, Y. Zhang, R. Qiancheng, Y. Jin, and P. Zhao, “Inherent strains in chemical-vapor-deposited bilayer graphene on Cu,” Carbon. 2021. link Times cited: 5 USED (low confidence) Y. Oh, H. Jung, K. J. Bae, Y. Kim, and J. Yu, “Analysis of mechanical and thermal characterization of hexagonal boron nitride using a molecular dynamics simulation with the new Dreiding force field,” Mechanics of Advanced Materials and Structures. 2021. link Times cited: 3 Abstract: The Dreiding force field, which is used in molecular dynamic… read moreAbstract: The Dreiding force field, which is used in molecular dynamics (MD) simulation, was newly developed to predict accurately the mechanical and thermal properties of hexagonal boron nitride (h-BN). The newly proposed Dreiding force field (N-DFF) has the force constants obtained from linear least square fitting and represents the system energy with more accuracy between the potential energy estimated by density functional theory and MD regarding the deformation of BN sheet. The mechanical and thermal properties of BN sheets obtained using N-DFF matched well the experimental and theoretical results. The N-DFF gives the best prediction of material properties of BN sheets. read less USED (low confidence) Z.-jun Lu, D. Fan, and L. Bai, “Particle‐Induced Erosional Behaviors of Diamond‐Like Carbon Films,” physica status solidi (RRL) – Rapid Research Letters. 2021. link Times cited: 0 Abstract: Particle‐induced erosion is an important form of materials w… read moreAbstract: Particle‐induced erosion is an important form of materials wear. The erosion mechanism lacks good understanding due to the limitation of experimental techniques to characterize the fast impact process between particle and materials. Herein, the particle‐induced erosion of diamond‐like carbon (DLC) films is investigated using molecular dynamics simulations. It is found that the impact process shows an evident fluctuation. The impact energy is mainly absorbed during the first fluctuation period, and the fluctuations in other periods are dominated by elastic deformations. The energy absorbed in the first period shows a linear relation with the maximum material loss, and such relation indicates that there exists a threshold vertical impact velocity to initiate the loss of DLC films, which is due to the initiation of their plastic deformation. The maximum impact force shows a linear dependence on the impact velocity, attributed to the structural changes of DLC films. Moreover, the DLC films show large volume loss with both impact angles of 90° and 45°, indicating that these films exhibit both brittle and ductile impact behaviors due to their specific structural changes. These results can help to uncover the erosional behaviors of DLC films and elucidate the particle‐induced erosion mechanisms at the nanoscale. read less USED (low confidence) B. S. Baboukani, N. D. A. Watuthanthrige, Z. Ye, and P. Nalam, “Effect of structural transitions of n-hexadecane in nanoscale confinement on atomic friction,” Carbon. 2021. link Times cited: 4 USED (low confidence) M. Shugaev and L. Zhigilei, “Mechanisms of Acoustic Desorption of Atomic Clusters and Exfoliation of Graphene Multilayers,” The Journal of Physical Chemistry C. 2021. link Times cited: 1 USED (low confidence) P. N. Babu and S. Pal, “Molecular Dynamics Simulation Based Study of Creep-Ratcheting Behavior of CNT Reinforced Nanocrystalline Aluminum Composite,” Transactions of the Indian National Academy of Engineering. 2021. link Times cited: 2 USED (low confidence) A. David, U. Tartaglino, M. Casalegno, and G. Raos, “Fracture in Silica/Butadiene Rubber: A Molecular Dynamics View of Design–Property Relationships,” ACS Polymers Au. 2021. link Times cited: 7 Abstract: Despite intense investigation, the mechanisms governing the … read moreAbstract: Despite intense investigation, the mechanisms governing the mechanical reinforcement of polymers by dispersed nanoparticles have only been partially clarified. This is especially true for the ultimate properties of the nanocomposites, which depend on their resistance to fracture at large deformations. In this work, we adopt molecular dynamics simulations to investigate the mechanical properties of silica/polybutadiene rubber, using a quasi-atomistic model that allows a meaningful description of bond breaking and fracture over relatively large length scales. The behavior of large nanocomposite models is explored systematically by tuning the cross-linking, grafting densities, and nanoparticle concentration. The simulated stress–strain curves are interpreted by monitoring the breaking of chemical bonds and the formation of voids, up to complete rupture of the systems. We find that some chemical bonds, and particularly the S–S linkages at the rubber–nanoparticle interface, start breaking well before the appearance of macroscopic features of fracture and yield. read less USED (low confidence) S. Ajori, S. Haghighi, H. Parsapour, and R. Ansari, “Fundamental frequency analysis of endohedrally functionalized carbon nanotubes with metallic nanowires: a molecular dynamics study,” Journal of Molecular Modeling. 2021. link Times cited: 2 USED (low confidence) J. F. Wang, S. Shi, J. P. Yang, and W. Zhang, “Multiscale analysis on free vibration of functionally graded graphene reinforced PMMA composite plates,” Applied Mathematical Modelling. 2021. link Times cited: 24 USED (low confidence) A. B. Sarvestani, A. Chogani, M. Shariat, A. Moosavi, and H. Kariminasab, “The effect of nanopores geometry on desalination of single-layer graphene-based membranes: A molecular dynamics study,” Journal of Molecular Liquids. 2021. link Times cited: 10 USED (low confidence) N. M. R. Shah, J. Song, and C.-D. Yeo, “Thermomechanical properties and frictional contact behavior of oxygen doped DLC film through molecular dynamics simulation,” Diamond and Related Materials. 2021. link Times cited: 4 USED (low confidence) S. Zhao, Y. Zhang, D. Chen, J. Yang, and S. Kitipornchai, “Enhanced Thermal Buckling Resistance of Folded Graphene Reinforced Nanocomposites with Negative Thermal Expansion: From Atomistic Study to Continuum Mechanics Modelling,” Composite Structures. 2021. link Times cited: 20 USED (low confidence) J. Vekeman et al., “Grand Canonical Monte Carlo Simulations to Determine the Optimal Interlayer Distance of a Graphene Slit-Shaped Pore for Adsorption of Methane, Hydrogen and their Equimolar Mixture,” Nanomaterials. 2021. link Times cited: 3 Abstract: The adsorption—for separation, storage and transportation—of… read moreAbstract: The adsorption—for separation, storage and transportation—of methane, hydrogen and their mixture is important for a sustainable energy consumption in present-day society. Graphene derivatives have proven to be very promising for such an application, yet for a good design a better understanding of the optimal pore size is needed. In this work, grand canonical Monte Carlo simulations, employing Improved Lennard–Jones potentials, are performed to determine the ideal interlayer distance for a slit-shaped graphene pore in a large pressure range. A detailed study of the adsorption behavior of methane, hydrogen and their equimolar mixture in different sizes of graphene pores is obtained through calculation of absolute and excess adsorption isotherms, isosteric heats and the selectivity. Moreover, a molecular picture is provided through z-density profiles at low and high pressure. It is found that an interlayer distance of about twice the van der Waals distance of the adsorbate is recommended to enhance the adsorbing ability. Furthermore, the graphene structures with slit-shaped pores were found to be very capable of adsorbing methane and separating methane from hydrogen in a mixture at reasonable working conditions (300 K and well below 15 atm). read less USED (low confidence) S. Chen, L. Gorbatikh, and D. Seveno, “Molecular Dynamics Simulations of Polyamide-6 Composite with Covalently Bonded Graphene Network for Thermal Conductivity Enhancement,” ACS Applied Nano Materials. 2021. link Times cited: 5 USED (low confidence) L. Safina, J. Baimova, K. Krylova, R. Murzaev, S. A. Shcherbinin, and R. Mulyukov, “Ni–Graphene Composite Obtained by Pressure–Temperature Treatment: Atomistic Simulations,” physica status solidi (RRL) – Rapid Research Letters. 2021. link Times cited: 8 Abstract: The incorporation of metal nanoparticles into novel carbon s… read moreAbstract: The incorporation of metal nanoparticles into novel carbon structures, such as crumpled graphene (CG), is a promising way to obtain a composite with better mechanical properties. Molecular dynamics simulation is used to investigate the deformation behavior of Ni–graphene composites, obtained by high‐temperature treatment, under uniaxial tension. The effect of temperatures between 1000 and 2000 K as well as the effect of nanoparticle size and anisotropy of the structure on the mechanical properties of the composite are studied. It is found that temperature from 1000 to 2000 K slightly affects the process of composite formation under hydrostatic compression. During the elastic regime of tension of the composite, the same values of Young's modulus are found for structures obtained at different temperatures. However, the ratio of nickel and carbon atoms considerably affects the mechanical properties under uniaxial tension: the less the number of Ni atoms, the higher the composite strength. Two of the three considered morphologies demonstrate close Young modulus and high strength. It is shown that the important advantage of the proposed structure is its homogeneity, which results in almost isotropic deformation. The obtained results open new prospects in using CG for composite fabrication. read less USED (low confidence) X. Yang and B. Zhang, “Rotational Friction Correlated with Moiré Patterns in Strained Bilayer Graphene: Implications for Nanoscale Lubrication,” ACS Applied Nano Materials. 2021. link Times cited: 6 USED (low confidence) Y. Chen, F. Meng, X. Bie, P. Ou, and J. Song, “Atomistic and continuum modeling of 3D graphene honeycombs under uniaxial in-plane compression,” Computational Materials Science. 2021. link Times cited: 1 USED (low confidence) C. Qiu et al., “Microstructural characteristics and mechanical behavior of SiC(CNT)/Al multiphase interfacial micro-zones via molecular dynamics simulations,” Composites Part B-engineering. 2021. link Times cited: 17 USED (low confidence) R. Han, H. Y. Song, and M. An, “Atomic simulation of interaction mechanism between dislocation and graphene in graphene/aluminum composites,” Computational Materials Science. 2021. link Times cited: 7 USED (low confidence) A. Singh and R. Batra, “Dynamics of pull and release of graphene nanoribbons,” Computational Materials Science. 2021. link Times cited: 0 USED (low confidence) L. Tian, H. Duan, J. Luo, Y. Cheng, and L. Shi, “Density Functional Theory and Molecular Dynamics Simulations of Nanoporous Graphene Membranes for Hydrogen Separation,” ACS Applied Nano Materials. 2021. link Times cited: 5 USED (low confidence) L. Deng, J. Li, S. Tang, and Z. Guo, “Diffusion of water nanodroplets on graphene with double-vacancy: the constraining effects of defect,” Applied Surface Science. 2021. link Times cited: 2 USED (low confidence) M. Chen, A. Weerasinghe, A. Muniz, A. Ramasubramaniam, and D. Maroudas, “Molecular-Dynamics Simulations on Nanoindentation of Graphene-Diamond Composite Superstructures in Interlayer-Bonded Twisted Bilayer Graphene: Implications for Mechanical Metamaterials,” ACS Applied Nano Materials. 2021. link Times cited: 8 USED (low confidence) B. Goh, K. J. Kim, C.-L. Park, E. S. Kim, S.-H. Kim, and J. Choi, “In-plane thermal conductivity of multi-walled carbon nanotube yarns under mechanical loading,” Carbon. 2021. link Times cited: 10 USED (low confidence) S. Zhang, Y. Zhu, F. Wang, X. Liu, H. Wu, and S. Luo, “Theoretical analysis of high strength and anti-buckling of three-dimensional carbon honeycombs under shear loading,” Composites Part B-engineering. 2021. link Times cited: 5 USED (low confidence) P.-Y. Wei, M. He, and W. Ao, “Molecular dynamics study of the frictional behaviors of diamond-like carbon films,” Applied Physics A. 2021. link Times cited: 5 USED (low confidence) W. Peng and K. Sun, “Interface structures and dislocation nucleation of Cu/graphene interface via molecular dynamic simulations,” Materialia. 2021. link Times cited: 6 USED (low confidence) J. Yang, Z. Shen, J. He, and Y. Li, “Efficient separation of small organic contaminants in water using functionalized nanoporous graphene membranes: Insights from molecular dynamics simulations,” Journal of Membrane Science. 2021. link Times cited: 22 USED (low confidence) B. Dankesreiter, J. Song, S. Rahman, N. M. R. Shah, and C.-D. Yeo, “Effects of diffused hydrogen atoms on thermomechanical properties and contact behavior of a diamond-like carbon film,” Journal of Applied Physics. 2021. link Times cited: 1 Abstract: Hydrogen atoms are doped to diamond-like carbon (DLC) to imp… read moreAbstract: Hydrogen atoms are doped to diamond-like carbon (DLC) to improve its thermomechanical properties and tribological performance as a surface protective coating. In this study, molecular dynamics (MD) simulations are performed to investigate the impacts of diffused H atoms on the mechanical stiffness, surface energy, specific heat, and thermomechanical contact behavior of DLC. The hydrogenated DLC (a-C:H) is prepared by adding H atoms to a fixed amount of C atoms (method 1) and by replacing C atoms in DLC with H atoms (method 2). The atomic percentage of hydrogen (at. % H) in DLC is varied from 0 to 8.6%. From the systematic MD simulation results, it is observed that the DLC's mechanical stiffness increases with at. % H due to the increasing density with a higher sp3%, but it shows a decreasing trend for method 2 due to the decreasing density. During the sliding contact with a hemispherical diamond tip, the a-C:H samples show a lower coefficient of friction (COF) than the hydrogen-free DLC (ta-C) sample for method 1 but a higher COF for method 2, which can be attributed to the changes in density and surface energy with respect to hydrogen contents in DLC. read less USED (low confidence) P. Ying et al., “Thermal transport in planar sp2-hybridized carbon allotropes: A comparative study of biphenylene network, pentaheptite and graphene,” International Journal of Heat and Mass Transfer. 2021. link Times cited: 35 Abstract: The biphenylene network with periodically arranged four-, si… read moreAbstract: The biphenylene network with periodically arranged four-, six-, and eightmembered rings has been successfully synthesized in very recent experiments. This novel two-dimensional (2D) carbon allotrope has potentials in applications of lithium storage and carbon-based circuitry. Understanding the thermal transport properties of biphenylene network is of critical importance for the performance and reliability of its practical applications. To this end, the thermal transport in biphenylene network is comprehensively investigated in this paper with the aid of molecular dynamics simulations together with first-principles calculations. For the sake of comparison, the thermal conductivities of other 2D sp2-hybridized carbon allotropes including graphene and pentaheptite are also investigated using the same method. It is found that the thermal conductivities of biphenylene network and pentaheptite are, respectively, only about one-thirteenth and one-eighth of graphene. Through the analysis of phonon property, mechanical property and electron density distribution, it is demonstrated that the great reduction in the thermal conductivity of biphenylene network and pentaheptite arises from the decline in their structural symmetry, which leads to the decrease of phonon group velocity and the reduction of phonon mean free path. read less USED (low confidence) D. Matté et al., “Molecular dynamics simulations of the isotopic effect on nanoscale friction,” Applied Physics A. 2021. link Times cited: 1 USED (low confidence) C. Zhang, C. Lu, G. Michal, J. Li, and R. Wang, “Strong strain hardening in graphene/nanotwinned metal composites revealed by molecular dynamics simulations,” International Journal of Mechanical Sciences. 2021. link Times cited: 15 USED (low confidence) B. Faria, N. Silvestre, and J. C. C. Lopes, “Graphdiyne nanotubes in ionic liquids: Characterization of interfacial interactions by molecular dynamics,” Journal of Molecular Liquids. 2021. link Times cited: 6 USED (low confidence) S. Liu, K. Duan, L. Li, X. Wang, and Y. Hu, “A multilayer coarse-grained molecular dynamics model for mechanical analysis of mesoscale graphene structures,” Carbon. 2021. link Times cited: 13 USED (low confidence) D. Kag, N. Luhadiya, N. D. Patil, and S. I. Kundalwal, “Strain and defect engineering of graphene for hydrogen storage via atomistic modelling,” International Journal of Hydrogen Energy. 2021. link Times cited: 24 USED (low confidence) Y. Rong, L. Zhang, and H. Huiping, “Molecular dynamics study on the deposition of Ni/graphene composite film,” Thin Solid Films. 2021. link Times cited: 5 USED (low confidence) G. Najafi, M. M. Mashhadi, and M. M. S. Fakhrabadi, “Reinforcement of polymer nanocomposites by ɑ-graphyne nanotubes: A multiscale simulation,” Computational Materials Science. 2021. link Times cited: 2 USED (low confidence) H. Pourmirzaagha, “On the thermal conductivity of the α2-graphyne nanotubes: A molecular dynamics investigation,” Mechanics of Advanced Materials and Structures. 2021. link Times cited: 0 Abstract: In this paper, the thermal conductivity characteristics of t… read moreAbstract: In this paper, the thermal conductivity characteristics of the α2-graphyne nanotubes are investigated. Molecular dynamics simulations are used for this purpose. The influences of chirality, diameter, length, strain and temperature on the thermal conductivity coefficient of the α2-graphyne nanotubes are explored. It is observed that the thermal conductivity coefficient of α2-graphyne nanotubes is significantly smaller than that of the carbon nanotubes. Besides, the thermal conductivity of the α2-graphyne nanotubes increases by increasing the nanotube diameter. However, longer α2-graphyne nanotubes have smaller thermal conductivity coefficients. Thermal conductivity coefficients of the armchair and zigzag α2-graphyne nanotubes are decreased by increasing the temperature. read less USED (low confidence) Y. Ni and Q. Tong, “Molecular Dynamics Simulations of the Motions of Droplets with Embedded Nanoparticles on Wettability Gradient Surfaces.” 2021. link Times cited: 2 Abstract: Tuning the spontaneous motion of pure nanodroplets on progra… read moreAbstract: Tuning the spontaneous motion of pure nanodroplets on programmed surfaces has progressed notably. However, impurities exist in droplets more often than not. We present molecular dynamics simulation... read less USED (low confidence) D. Jamshideasli, H. Babaei, P. Keblinski, and J. Khodadadi, “Interfacial thermal conductance between multi-layer graphene sheets and solid/liquid octadecane: A molecular dynamics study,” Journal of energy storage. 2021. link Times cited: 7 USED (low confidence) J. Baimova, L. Galiakhmetova, and R. Mulyukov, “Diamond-like structures under hydrostatic loading: Atomistic simulation,” Computational Materials Science. 2021. link Times cited: 2 USED (low confidence) S. Kim, W. Park, and O. Kwon, “Evaluation of the Stress-Strain of Single-Layer Graphene Sheet Including a Crack.” 2021. link Times cited: 0 Abstract: Graphene is extremely thin, which exhibits extraordinary mec… read moreAbstract: Graphene is extremely thin, which exhibits extraordinary mechanical, physical and electrical properties, such that there are applications for this material in batteries and flexible displays. However, during the fabrication of commercial graphene devices, defects such as impurities and vacancies inevitably occur and the resulting cracks or notches can deteriorate the performance of graphene-based structures. Thus, it is necessary to understand the mechanical properties of graphene sheets including cracks so as to design healthy graphene-based structures. The present study investigated the effects of cracks (at various positions, distances and angles) on the strength of graphene. Four initial positions were considered in conjunction with uniaxial tensile loading, along with nine different distances and three initial angles. It was found that a crack located at the top center of the sheet represents the most vulnerable stress point, while a crack located further than one quarter of the sheet from the loading point had the greatest effect on the stress. In addition, the maximum stress was obtained in conjunction with a crack inclined at 45° relative to the loading direction. These results are expected to assist in the future evaluation for the safety usage of graphene sheets. read less USED (low confidence) S. Zhao, Y. Zhang, J. Yang, and S. Kitipornchai, “Significantly improved interfacial shear strength in graphene/copper nanocomposite via wrinkles and functionalization: A molecular dynamics study,” Carbon. 2021. link Times cited: 41 USED (low confidence) Y. Liu et al., “Large-scale generation and characterization of amorphous boron nitride and its mechanical properties in atomistic simulations,” Journal of Non-crystalline Solids. 2021. link Times cited: 6 USED (low confidence) L. Wang et al., “Effect of interfacial bonding on dislocation strengthening in graphene nanosheet reinforced iron composite: A molecular dynamics study,” Computational Materials Science. 2021. link Times cited: 8 USED (low confidence) S. P. Patil, “Enhanced mechanical properties of double-walled carbon nanotubes reinforced silica aerogels: An all-atom simulation study,” Scripta Materialia. 2021. link Times cited: 8 USED (low confidence) A. Priyadarsini and B. Mallik, “Comparative first principles‐based molecular dynamics study of catalytic mechanism and reaction energetics of water oxidation reaction on 2D‐surface,” Journal of Computational Chemistry. 2021. link Times cited: 3 Abstract: The study of the water‐splitting process, which can proceed … read moreAbstract: The study of the water‐splitting process, which can proceed in 2e− as well as 4e− pathway, reveals that the process is entirely an uphill process, and the third step, that is, the oxooxo bond formation is the rate‐determining step. The kinetic barrier of the oxygen evolution reaction (OER) on the 2D material catalysts in the presence of explicit solvents is scarcely studied. Here, we investigate the dynamics of the OER on the undoped graphene and the activation energy barrier of each step using first principles molecular dynamics simulations. Here we provide a detailed analysis of the kinetics of all the 4e− transfer steps of OER on the graphene surface. We also compare the accuracy of one of the density functional theory (DFT) functionals and density functional based tight binding (DFTB) method in explaining the OER steps. The comparative study reveals that DFTB can be used for performing metadynamics simulations quipped with much less computational cost than DFT functionals. By both Perdew–Burke–Ernzerhof and DFTB methods, the third step is revealed to be the rate‐determining step with an energy barrier of 21.19 ± 0.51 and 20.23 ± 0.20 kcal mol−1, respectively. DFTB gives an impression of being successful in predicting the energy barriers of OER in 4e‐ transfer pathway and comparable to the DFT method, and we would like to extend the use of DFTB for further studies with a sizable and complex system. read less USED (low confidence) H. Huang, H. Huang, X. Tang, K. Xie, and Q. Peng, “Enhanced self-healing of irradiation defects near a Ni–graphene interface by damaged graphene: Insights from atomistic modeling,” Journal of Physics and Chemistry of Solids. 2021. link Times cited: 5 USED (low confidence) C. Zhang, A. Godbole, G. Michal, and C. Lu, “High shock resistance and self-healing ability of graphene/nanotwinned Cu nanolayered composites,” Journal of Alloys and Compounds. 2021. link Times cited: 16 USED (low confidence) H. Huang, B. Cai, H. Li, X. Yuan, and Y. Jin, “Atomistic simulation of energetic displacement cascades near an Ni–graphene interface,” Journal of Supercritical Fluids. 2021. link Times cited: 10 USED (low confidence) Y.-C. Wu, J. Shao, and H. Zhan, “Damage and self-healing characteristics of monolayer graphene enhanced Cu under ballistic impact,” Mechanics of Materials. 2021. link Times cited: 13 USED (low confidence) J.-C. Kim, J. H. Wi, N.-C. Ri, and S.-I. Ri, “Thermal conductivity of graphene/graphane/graphene heterostructure nanoribbons: Non-equilibrium molecular dynamics simulations,” Solid State Communications. 2021. link Times cited: 5 USED (low confidence) X. Zhou, G. Jiang, S. Song, J. Li, and L. Liu, “Molecular dynamics simulation of enhanced interfacial cohesive behavior of Ni-coated MWCNT/Mg composites,” Composite Interfaces. 2021. link Times cited: 1 Abstract: ABSTRACT Debonding processes of different Ni-coated MWCNT/Mg… read moreAbstract: ABSTRACT Debonding processes of different Ni-coated MWCNT/Mg interface models were studied by molecular dynamics simulations, and the stress–displacement relationships of different interface models were obtained by fitting a modified exponential cohesive zone law for interface. In addition, the debonding behaviors of Ni-coated and uncoated MWCNT/Mg interface were compared. The results show that CNT wall numbers and inner diameters as well as interface orientations have significant effects on the Ni-coated and uncoated MWCNT/Mg interface cohesive-zone model parameters. Compared with the above two kinds of uncoated MWCNT/Mg interface models, the average values of the peak stress and the work of separation for the Ni-coated MWCNT/Mg interface models are both increased significantly, showing that the addition of a Ni-modified coating on the surface of MWCNTs can effectively enhance the adhesion capacity of the MWCNT/Mg interface. Graphical abstract read less USED (low confidence) L. Zhao and P. Cao, “Temperature dependence of contact quality inducing suppression of stick–slip friction,” Extreme Mechanics Letters. 2021. link Times cited: 2 USED (low confidence) J. Hu, J. Zhou, A. Zhang, L. Yi, and J. Wang, “Temperature dependent mechanical properties of graphene based carbon honeycombs under tension and compression,” Physics Letters A. 2021. link Times cited: 7 USED (low confidence) J. Varillas and O. Frank, “Wrinkle development in graphene sheets with patterned nano-protrusions: A molecular dynamics study,” Carbon. 2021. link Times cited: 3 USED (low confidence) X. Zhang, Z. Chen, H. Chen, and L. Xu, “Comparative studies of thermal conductivity for bilayer graphene with different potential functions in molecular dynamic simulations,” Results in physics. 2021. link Times cited: 11 USED (low confidence) S. P. Patil, A. Kulkarni, and B. Markert, “Shockwave response of graphene aerogels: An all-atom simulation study,” Computational Materials Science. 2021. link Times cited: 12 USED (low confidence) S. Zhang, D. He, P. Huang, and F. Wang, “Moiré pattern at graphene/Al (111) interface: Experiment and simulation,” Materials & Design. 2021. link Times cited: 5 USED (low confidence) H.-C. Chen, G. Zhang, Z. Lu, X. Li, N. Srikanth, and L. Bai, “Tribological behaviors of DLC films with hierarchical surface textures under water lubrication: A molecular dynamic simulation,” Journal of Micromechanics and Molecular Physics. 2021. link Times cited: 4 Abstract: Tribological behaviors of diamond-like carbon (DLC) films wi… read moreAbstract: Tribological behaviors of diamond-like carbon (DLC) films with different levels of hierarchical surface textures with lubricant water molecules are investigated through molecular dynamics simulation. The friction forces stabilize at a small value for small normal loads, due to the complete separation between DLC films by water molecules, while friction forces with large normal loads show complicated changes under the cooperation of interfacial evolution and water behaviors. Under large normal loads, friction force increases firstly due to the direct contact of surface textures which are subsequently worn and graphitized, resulting in the temporary stabilization of friction force at a large value. With their further wearing, the amount of interfacial carbon clusters decreases and water molecules distribute evenly at interface, which leads to the gradual decrease and final stabilization of friction force. During the sliding, the water molecules show a restoration in the structure and amount of hydrogen bonds, thus making these molecules play different roles in various stages, i.e., these molecules demonstrate a better diffusion during the friction rise and an enhanced separating effect for DLC films during the friction stabilization. Furthermore, the same amount of water molecules in the one-level hierarchical (L1) model has a larger bearing capacity than that in the two-level hierarchical (L2) model. When the normal load exceeds the bearing capacity of water, the friction force for model L2 is more stable and smaller than that for model L1 after running-in periods due to flattened interfaces and evenly distributed water molecules. read less USED (low confidence) J. Li, Y. Peng, X. Tang, Q. Xu, G. Zhang, and L. Bai, “Enhancement of hydrogenated graphene on mechanical and adhesive properties of diamond-like carbon films,” Tribology International. 2021. link Times cited: 5 USED (low confidence) X. Yang and B. Zhang, “Twisted bilayer graphene/h-BN under impact of a nano-projectile,” Applied Surface Science. 2021. link Times cited: 15 USED (low confidence) C. Zhang et al., “Temperature-dependent brittle-ductile transition of α-graphyne nanotubes under uniaxial tension,” Computational Materials Science. 2021. link Times cited: 5 USED (low confidence) A. Jagusiak, J. Goclon, and T. Panczyk, “Adsorption of Evans blue and Congo red on carbon nanotubes and its influence on the fracture parameters of defective and functionalized carbon nanotubes studied using computational methods,” Applied Surface Science. 2021. link Times cited: 15 USED (low confidence) C. Zhu, J. Ji, Z. Zhang, S. Dong, N. Wei, and J. Zhao, “Huge stretchability and reversibility of helical graphenes using molecular dynamics simulations and simplified theoretical models,” Mechanics of Materials. 2021. link Times cited: 10 USED (low confidence) S. Sinha, D. Kumar, and A. Patnaik, “An investigation on thermal stability of single wall carbon nanotubes (SWCNTs) by molecular dynamics simulations,” Materials Today: Proceedings. 2021. link Times cited: 2 USED (low confidence) J. Shi, L. Yang, J. Shen, and K. Cai, “Nonlinear vibration of a buckled/damaged BNC nanobeam transversally impacted by a high-speed C60,” Scientific Reports. 2021. link Times cited: 0 USED (low confidence) X. Jinkun, H. Tan, J. Chen, A. Martini, and C. Zhang, “Effect of carbon content on microstructure, hardness and wear resistance of CoCrFeMnNiCx high-entropy alloys,” Journal of Alloys and Compounds. 2020. link Times cited: 74 USED (low confidence) W. Yong, J. Derksen, and Y. Zhou, “The influence of CO2 and CH4 mixture on water wettability in organic rich shale nanopore,” Journal of Natural Gas Science and Engineering. 2020. link Times cited: 13 USED (low confidence) A. Rajabpour and M. Abbasi, “Thermodynamic Properties of Monatomic, Diatomic, and Polyatomic Gaseous Natural Refrigerants: A Molecular Dynamics Simulation.” 2020. link Times cited: 1 Abstract: Owing to their lower adverse environmental impacts, natural … read moreAbstract: Owing to their lower adverse environmental impacts, natural refrigerants have recently attracted a huge deal of attention. In this regard, the present study is aimed to evaluate the thermodynamic properties of different gaseous natural refrigerants at the molecular level using molecular dynamics (MD) simulations. In this context, the density (as a representative of structural features), enthalpy, and specific heat capacity (as representatives of energy properties) of several natural gaseous refrigerants including helium, nitrogen, methane, and ethane were assessed. Lennard-Jones potential was used for simulation of helium and nitrogen while AIREBO potential and OPLS-AA force-fields were employed for simulation of methane and ethane as polyatomic hydrocarbon refrigerants. Simulations are carried out at various temperatures above the boiling point and pressures of 1, 2, and 5 bar. MD results were in good agreement with the experimental data. Among the applied potentials, AIREBO potential offered results closer to the experimental data as compared with OPLS-AA force-field. The methane-ethane mixture was also addressed at different pressures and compared with the Peng-Robinson equation of state. The results of this study indicated that molecular dynamics can be employed as a reliable tool for predicting the thermodynamic properties of natural refrigerants. The results can be used in the refrigeration cycles. read less USED (low confidence) G. Sunnardianto, G. Bokas, A. Hussein, C. Walters, O. Moultos, and P. Dey, “Efficient hydrogen storage in defective graphene and its mechanical stability: A combined density functional theory and molecular dynamics simulation study,” International Journal of Hydrogen Energy. 2020. link Times cited: 28 USED (low confidence) P. Gao et al., “Millimeter-Scale and Billion-Atom Reactive Force Field Simulation on Sunway Taihulight,” IEEE Transactions on Parallel and Distributed Systems. 2020. link Times cited: 13 Abstract: Large-scale molecular dynamics (MD) simulations on supercomp… read moreAbstract: Large-scale molecular dynamics (MD) simulations on supercomputers play an increasingly important role in many research areas. With the capability of simulating charge equilibration (QEq), bonds and so on, Reactive force field (ReaxFF) enables the precise simulation of chemical reactions. Compared to the first principle molecular dynamics (FPMD), ReaxFF has far lower requirements on computational resources so that it can achieve higher efficiencies for large-scale simulations. In this article, we present our efforts on scaling ReaxFF on the Sunway TaihuLight Supercomputer (TaihuLight). We have carefully redesigned the force analysis and neighbor list building steps. By applying fine-grained optimizations we gain better single process performance. For the many-body interactions, we propose an isolated computation and update strategy and implement inverse trigonometric functions. For QEq, we implement a pipelined conjugate gradient (CG) approach to achieving better scalability. Furthermore, we reorganize the data layout and implement the update operation based on data locality in ReaxFF. Our experiments show that this approach can simulate chemical reactions with 1,358,954,496 atoms using 4,259,840 cores with a performance of 0.015 ns/day. To our best knowledge, this is the first realization of chemical reaction simulation with a millimeter-scale force field. read less USED (low confidence) S. Kozlova, S. Gubin, and I. Maklashova, “Simulation of the isothermal and Hugoniot characteristics of organic compounds via the reactive molecular dynamics,” Journal of Physics: Conference Series. 2020. link Times cited: 0 Abstract: This article provides the results of reactive molecular dyna… read moreAbstract: This article provides the results of reactive molecular dynamics simulation of shock loading of cyclic hydrocarbon C6H6 and isotherm curve of energy-intensive nitramine C4H8N8O8. To describe the interatomic interaction, as well as to analyze the kinetics of decomposition, we used two parameterizations of the reactive force field ReaxFF. In this paper, we compared the capabilities of ReaxFF force fields to describe the kinetics of the decomposition of benzene behind the front of a shock wave and the ability to reproduce phase transformations of carbon under conditions of high pressures and temperatures. The results obtained are in good agreement with the experiment. read less USED (low confidence) S. Nakarmi and V. Unnikrishnan, “Understanding size and strain induced variabilities in thermal conductivity of carbon nanotubes: a molecular dynamics study,” Mechanics of Advanced Materials and Structures. 2020. link Times cited: 7 Abstract: Carbon nanotubes (CNTs) have shown excellent thermal conduct… read moreAbstract: Carbon nanotubes (CNTs) have shown excellent thermal conduction capabilities and are ideal for thermal management in miniature nano-electronic devices and composite systems. As we go down the length scale, the intensive properties such as thermal conductivity are no longer a material property and the influence of size (length and diameter), defect, and strain state on the thermal conductivity becomes significant. An accurate understanding of the effect of these parameters on the thermal conductivity of nanotubes is necessary to understand and develop efficient nanotube systems with desired thermal characteristics. In this work, we examine the effect of size and strain states on the longitudinal thermal conductivity of single walled carbon nanotubes (SWCNT) using reverse non-equilibrium molecular dynamic simulation. A statistical approach involving parametric study is also adopted covering a wide range of nanotube lengths and diameters. This is followed by a comparative study of phonon density of states of nanotubes in pristine and altered configurations. read less USED (low confidence) K. Cai, X. Li, J. Shi, and Q. Qin, “Nanospring from partly hydrogenated graphene ribbon: A molecular dynamics study,” Applied Surface Science. 2020. link Times cited: 11 USED (low confidence) H. Xu, B. Wu, and L. Gan, “Molecular dynamics simulation of the coalescence behavior of small carbon clusters at high temperature,” Chemical Physics. 2020. link Times cited: 0 USED (low confidence) G. Ru, W. Qi, K. Tang, Y. Wei, and T. Xue, “Interlayer friction and superlubricity in bilayer graphene and MoS2/MoSe2 van der Waals heterostructures,” Tribology International. 2020. link Times cited: 45 USED (low confidence) Q. Liu, L. Li, Y. Jeng, G. Zhang, C. Shuai, and X. Zhu, “Effect of interatomic potentials on modeling the nanostructure of amorphous carbon by liquid quenching method,” Computational Materials Science. 2020. link Times cited: 9 USED (low confidence) S. Paul, K. Momeni, and V. Levitas, “Shear-induced diamondization of multilayer graphene structures: A computational study,” Carbon. 2020. link Times cited: 17 USED (low confidence) J. Tan, Y. Wang, and Y. Guo, “Humidity effect on peeling of monolayer graphene and hexagonal boron nitride,” Nanotechnology. 2020. link Times cited: 3 Abstract: Ambient humidity introduces water adsorption and intercalati… read moreAbstract: Ambient humidity introduces water adsorption and intercalation at the surfaces and interfaces of low-dimensional materials. Our extensive molecular dynamics (MD) simulations reveal the completely opposite contributions of interfacial water to the peeling of monolayer graphene and hexagonal boron nitride (h-BN) sheets from graphite and BN substrates. For graphene, interfacial water decreases the peeling force, due to lower adhesion at the graphene/water interface. The peeling force of h-BN increases with an increase in the thickness of interfacial water, owing to stronger adhesion at the h-BN/water interface and the detachment of the water layer from the substrates. In this work, a theoretical model considering graphene/water and water/substrate interfacial adhesion energies is established, to predict the peeling forces of graphene and h-BN, which coincides well with the peeling forces predicted by the MD simulations. Our results should provide a deeper insight into the effect of interfacial water, induced by ambient humidity, on mechanical exfoliation and the transfer of two-dimensional van der Waals crystals. read less USED (low confidence) H. Montes-Campos et al., “Ionic liquids nanoconfined in zeolite-templated carbon: A computational study,” Journal of Molecular Liquids. 2020. link Times cited: 3 USED (low confidence) R. Kumar, S. Sruthi, A. Kiruthika, and V. Karthik, “Atomistic modelling of carbon nanotube networks and analysis of inter filler distance,” Materials Today: Proceedings. 2020. link Times cited: 1 USED (low confidence) L. Pascazio, J. W. Martin, K. Bowal, J. Akroyd, and M. Kraft, “Exploring the internal structure of soot particles using nanoindentation: A reactive molecular dynamics study,” Combustion and Flame. 2020. link Times cited: 19 USED (low confidence) N. Orekhov, G. Ostroumova, and V. Stegailov, “High temperature pure carbon nanoparticle formation: Validation of AIREBO and ReaxFF reactive molecular dynamics,” Carbon. 2020. link Times cited: 40 USED (low confidence) Y.-C. Wang, Y. Zhu, Z. Z. He, and H. Wu, “Multiscale investigations into the fracture toughness of SiC/graphene composites: Atomistic simulations and crack-bridging model,” Ceramics International. 2020. link Times cited: 16 USED (low confidence) K. Zhang, L. Liu, and G. Huang, “Nanoconfined Water Effect on CO2 Utilization and Geological Storage,” Geophysical Research Letters. 2020. link Times cited: 19 Abstract: Understanding nanoconfined water effect on CO2 utilization a… read moreAbstract: Understanding nanoconfined water effect on CO2 utilization and storage has tremendous implications in academic research and practical applications, especially for extremely low‐permeability shale reservoirs. Here, a new nanoscale‐extended cubic‐plus association equation of state is developed by including the confinement effects and intermolecular interactions, based on which the phase behavior and interfacial tension of the pure water and water‐CO2 system are accurately calculated. Moreover, three important parameters, caprock‐sealing pressure, maximum storage height, and storage capacity, are quantitatively determined for assessing the potential for the CO2 storage. On the basis of the results from this study, the negative effect of nanoconfiend water can be substantially reduced or even converted to be positive for the CO2 utilization and storage in the shale reservoirs due to the extremely small pore scale as well as the associated strong confinements and intermolecular interactions. Overall, this study supports the foundation of general practical applications pertaining to CO2 utilization and geological storage in unconventional low‐permeability shale formations with existence of nanoconfined water. read less USED (low confidence) J. Gao, C. Si, Y.-R. Yang, B. Cao, and X.-dong Wang, “Molecular Dynamics Investigation on Thermal Conductivity and Phonon Transmission of Folded Graphene,” ECS Journal of Solid State Science and Technology. 2020. link Times cited: 3 Abstract: State Key Laboratory of Alternate Electrical Power System wi… read moreAbstract: State Key Laboratory of Alternate Electrical Power System with Renewable Energy Sources, North China Electric Power University, Beijing 102206, People’s Republic of China Research Center of Engineering Thermophysics, North China Electric Power University, Beijing 102206, People’s Republic of China Institute of Energy and Power Engineering, Zhejiang University of Technology, Hangzhou 310023, People’s Republic of China Key Laboratory for Thermal Science and Power Engineering of Ministry of Education, Department of Engineering Mechanics, Tsinghua University, Beijing 100084, People’s Republic of China read less USED (low confidence) H. Amiri, J. A. Mohandesi, and P. Marashi, “Tensile properties of pillared graphene block,” Materials Science and Engineering B-advanced Functional Solid-state Materials. 2020. link Times cited: 3 USED (low confidence) F. Ebrahem, J. Stratmann, M. Stoffel, B. Markert, and F. Bamer, “Continuous Zachariasen carbon monolayers under tensile deformation: Insights from molecular dynamics simulations,” Extreme Mechanics Letters. 2020. link Times cited: 6 USED (low confidence) L. Cao and F. Fan, “Deformation and instability of three-dimensional graphene honeycombs under in-plane compression: Atomistic simulations,” Extreme Mechanics Letters. 2020. link Times cited: 7 USED (low confidence) C. Zhang, C. Lu, L. Pei, J. Li, and R. Wang, “The wrinkling and buckling of graphene induced by nanotwinned copper matrix: A molecular dynamics study.” 2020. link Times cited: 9 USED (low confidence) G. A. Varzandian, S. Ziaee, M. Farid, and A. Niknejad, “Small Scale Effect On Vibration Of Thermally Postbuckled Monolayer Graphene Nanoribbon Based On Nonlocal Elasticity Theory.” 2020. link Times cited: 0 Abstract: In the present research, vibration behavior is presented for… read moreAbstract: In the present research, vibration behavior is presented for a thermally postbuckled two side clamped monolayer graphene nanoribbon (GNR). The monolayer GNR is modeled as a nonlocal orthotropic plate strip which contains small scale effects. The formulations are based on the Kirchhoff's plate theory, and von Karman-type nonlinearity is considered in strain-displacement relations. The thermal effects are also included and the material properties are assumed to be temperature-dependent. The initial deflection caused by thermal postbuckling and internal loads are taken into account. A coupled system of equations is derived and a new semi analytical solution is obtained. The effects of variation of small scale parameter to the natural frequencies, deflections and mode shapes of GNR are analyzed and the numerical results are obtained from the nonlocal plate model; also, MD simulations are used to investigate different properties of GNR including both buckling and vibrational behaviors. The small scale coefficient is calibrated using MD simulations. Numerical results are compared with those of similar researches. Effects of various parameters on the postbuckled vibration of GNR in thermal environments such as scale parameter, length and thermal load are presented. Stability and occurrence probability of internal resonance between vibration modes around a buckled configuration is investigated. read less USED (low confidence) S. P. Patil, P. Shendye, and B. Markert, “Molecular dynamics simulations of silica aerogel nanocomposites reinforced by glass fibers, graphene sheets and carbon nanotubes: A comparison study on mechanical properties,” Composites Part B-engineering. 2020. link Times cited: 44 USED (low confidence) M. Kohestanian, Z. sohbatzadeh, and S. Rezaee, “Mechanical properties of continuous fiber composites of cubic silicon carbide (3C-SiC) / different types of carbon nanotubes (SWCNTs, RSWCNTs, and MWCNTs): A molecular dynamics simulation,” Materials today communications. 2020. link Times cited: 11 USED (low confidence) J. Shi, A. Wang, B. Song, and K. Cai, “A GHz rotary nanoflake driven by diamond needles: A molecular dynamics study,” Materials & Design. 2020. link Times cited: 10 USED (low confidence) Y. Zhao et al., “Molecular Dynamics Simulations of Twisting-Induced Helical Carbon Nanotube Fibers for Reinforced Nanocomposites,” ACS Applied Nano Materials. 2020. link Times cited: 7 Abstract: Carbon
nanotube fibers have attracted much interest because … read moreAbstract: Carbon
nanotube fibers have attracted much interest because of
their outstanding multifunctional properties. In this work, double-helix
carbon nanotube fibers (DHCNFs) assembled by combined self-twisting
and whole-twisting processes are presented, and their mechanical properties
were studied based on atomic simulation. We found that the self-twisting
of carbon nanotubes (CNTs) can lead to interesting intertube entanglements,
with the formation of a helical structure. In addition, the twisting
process can cause a remarkable decline of the mechanical properties
of CNTs owing to their hollow structure collapse, thus deteriorating
the tensile mechanical performances of DHCNFs. Meanwhile, by tuning
related twisting parameters, different fracture failure modes, including
simultaneous and stepwise breakages, can be found. More importantly,
it was revealed that, as nanoenhancements, the helical morphology
of DHCNFs can effectively enhance the interlocking effect between
CNTs and the matrix, thereby improving the interfacial strength and
toughness of DHCNF-reinforced nanocomposites. This work systemically
studied the effect of the twisting operation on the mechanical properties
of DHCNFs and provided an innovative way of simultaneously enhancing
the strength and toughness of CNT-based nanocomposites. read less USED (low confidence) S. Zhang, P. Huang, and F. Wang, “Graphene-boundary strengthening mechanism in Cu/graphene nanocomposites: A molecular dynamics simulation,” Materials & Design. 2020. link Times cited: 41 USED (low confidence) H. Pourmirzaagha, A. Y. Sendi, and S. Rouhi, “Molecular dynamics simulations of the mechanical properties of two new types of graphyne nanotubes: α-graphyne and α2-graphyne nanotubes,” Physica E-low-dimensional Systems & Nanostructures. 2020. link Times cited: 6 USED (low confidence) E. Iakovlev, P. Zhilyaev, and I. Akhatov, “Adhesion energy of ethane–graphite interface: Atomistic study,” Journal of Physics: Conference Series. 2020. link Times cited: 0 Abstract: Adhesion energy is an important characteristic of interfacia… read moreAbstract: Adhesion energy is an important characteristic of interfacial interactions. Usually one apply notion of adhesion energy to solid–solid interfaces, but it also could be extended to gas–solid and liquid–solid interfaces. In later case phenomenon of adsorption is closely related to the adhesion energy. In this work we apply molecular dynamics method to calculate the specific adhesion energy for gas and liquid ethane on a graphite substrate. Influence of temperature and density on the value of the specific adhesion energy is investigated. Langmuir adsorption model is applied to interpret results and establish connection between notions of adsorption heat and specific adhesion energy. Appearance of multilayer adsorption is detected for higher densities. Developed model and numerical approach to calculate adhesion energy and surface coverage can be applied for different types of the adsorbate and the substrate. read less USED (low confidence) L. Zhong, H. Gao, and X. Li, “Atomistic simulations of the tensile behavior of graphene fibers,” Extreme Mechanics Letters. 2020. link Times cited: 7 USED (low confidence) B. Faria, C. Guarda, N. Silvestre, and J. Lopes, “Aluminum composites reinforced by γ-graphynes: The effect of nanofillers porosity and shape on crystal growth and composite strengthening,” Computational Materials Science. 2020. link Times cited: 6 USED (low confidence) K. Krylova, J. Baimova, I. Lobzenko, and A. I. Rudskoy, “Crumpled graphene as a hydrogen storage media: Atomistic simulation,” Physica B-condensed Matter. 2020. link Times cited: 22 USED (low confidence) J. Park, P. Pena, and A. Tekes, “Thermal Transport Behavior of Carbon Nanotube–Graphene Junction under Deformation,” International Journal of Nanoscience. 2020. link Times cited: 2 Abstract: We employ molecular dynamics simulations to explore the effe… read moreAbstract: We employ molecular dynamics simulations to explore the effect of tensile strain on the thermal conductivity of carbon nanotube (CNT)–graphene junction structures. Two types of CNT–graphene junctions are simulated; a seamless junction between CNT and graphene with pure [Formula: see text] covalent bonds, and a junction with mixed [Formula: see text] covalent bonds are studied. The most interesting observation is that the thermal conductivity of a CNT–graphene junction structure increases with an increase in mechanical strain. For the case of a (6,6) CNT–graphene junction structure with an inter-pillar distance (the length of graphene floor between two CNT–graphene junctions) of 15[Formula: see text]nm, the thermal conductivity is improved by 22.4% with 0.1 tensile strain. The thermal conductivity improvement by mechanical strain is enhanced when a larger graphene floor is placed between junctions since a larger graphene floor allows larger deformation (larger tensile strain) without breaking bonds in the junction structure. However, the thermal conductivity is found to more strongly depend on the C–C bond hybridization at the intramolecular junctions with pure [Formula: see text] hybridization showing a higher thermal conductivity when compared to mixed [Formula: see text] bonding regardless of the amount of tensile strain. The obtained results will contribute to the development of flexible electronics by providing a theoretical background on the thermal transport of three-dimensional carbon nanostructures under deformation. read less USED (low confidence) M. Chen, A. M. Christmann, A. Muniz, A. Ramasubramaniam, and D. Maroudas, “Molecular-Dynamics Analysis of Nanoindentation of Graphene Nanomeshes: Implications for 2D Mechanical Metamaterials.” 2020. link Times cited: 5 Abstract: We report results of a comprehensive computational study of … read moreAbstract: We report results of a comprehensive computational study of the mechanical response to nanoindentation of graphene nanomeshes (GNMs) or nanoporous graphene, namely, single-layer graphene sheets wit... read less USED (low confidence) G. A. Varzandian, S. Ziaee, M. Farid, and A. Niknejad, “Nonlinear Vibration and Stability Analysis of Thermally Postbuckled Double-Layered Graphene Sheet under 1:1 and 3:1 Internal Resonance,” International Journal of Structural Stability and Dynamics. 2020. link Times cited: 1 Abstract: In the present research, vibration behavior is presented for… read moreAbstract: In the present research, vibration behavior is presented for a thermally postbuckled double layered graphene sheet (DLGS). The DLGS is modeled as a nonlocal orthotropic plate and contains small-sca... read less USED (low confidence) P. N. Babu, B. Gargeya, B. C. Ray, and S. Pal, “Atomistic investigation of mechanical behavior for CNT reinforced nanocrystalline aluminum under biaxial tensile loading,” Materials Today: Proceedings. 2020. link Times cited: 7 USED (low confidence) D. Hong, T. Si, X. Li, and X. Guo, “Reactive molecular dynamic simulations of the CO2 gasification effect on the oxy-fuel combustion of Zhundong coal char,” Fuel Processing Technology. 2020. link Times cited: 28 USED (low confidence) D. Liang, Z. Xu, Z. Fu, and W. Liao, “Effect of differing stator and rotor radii on a three-class rotation-transmission nanobearing driven by a gigahertz rotary nanomotor,” Materials today communications. 2020. link Times cited: 3 USED (low confidence) K. E. Eshkalak, S. Sadeghzadeh, and M. Jalaly, “Thermal resistance analysis of hybrid graphene-boron nitride nanosheets: The effect of geometry, temperature, size, strain and structural defects,” Computational Materials Science. 2020. link Times cited: 18 USED (low confidence) A. Chogani, A. Moosavi, A. B. Sarvestani, and M. Shariat, “The effect of chemical functional groups and salt concentration on performance of single-layer graphene membrane in water desalination process: A molecular dynamics simulation study,” Journal of Molecular Liquids. 2020. link Times cited: 38 USED (low confidence) B. Li et al., “Atomistic simulations of vibration and damping in three-dimensional graphene honeycomb nanomechanical resonators,” Superlattices and Microstructures. 2020. link Times cited: 9 USED (low confidence) J. Shi, Z. Cao, J. Wang, J. Shen, and K. Cai, “Stable rotation transmission of a CNT-based nanogear drive system with intersecting axes at low temperature,” Surface Science. 2020. link Times cited: 9 USED (low confidence) M. Gamil, Q. Pei, and Y. Zhang, “Mechanical behaviour of kirigami graphene under shear loading,” Computational Materials Science. 2020. link Times cited: 10 USED (low confidence) L. Wang, D. Li, J. Shi, and K. Cai, “Strength analysis of a defective diamondene nanoribbon under uni-axial tension,” Computational Materials Science. 2020. link Times cited: 3 USED (low confidence) M. Goel, S. Harsha, S. Singh, and A. Sahani, “Analysis of temperature, helicity and size effect on the mechanical properties of carbon nanotubes using molecular dynamics simulation,” Materials Today: Proceedings. 2020. link Times cited: 13 USED (low confidence) C. Zhang, C. Lu, L. Pei, J. Li, and R. Wang, “The structural rearrangement with secondary reinforcement in graphene/nanotwinned copper nanocomposites: A molecular dynamics study,” Composites Part B-engineering. 2020. link Times cited: 23 USED (low confidence) S. Norouzi and M. M. S. Fakhrabadi, “Anisotropic nature of thermal conductivity in graphene spirals revealed by molecular dynamics simulations,” Journal of Physics and Chemistry of Solids. 2020. link Times cited: 16 USED (low confidence) X. Zhou, X. Liu, J. Lei, and Q. Yang, “Atomic simulations of the formation of twist grain boundary and mechanical properties of graphene/aluminum nanolaminated composites,” Computational Materials Science. 2020. link Times cited: 18 USED (low confidence) H. Matsubara, G. Kikugawa, T. Bessho, and T. Ohara, “Evaluation of thermal conductivity and its structural dependence of a single nanodiamond using molecular dynamics simulation,” Diamond and Related Materials. 2020. link Times cited: 19 USED (low confidence) J. Shi, C. Hu, J. Shen, K. Cai, and J. Wang, “Mechanical properties of bonded few-layered graphene via uniaxial test: A molecular dynamics simulation study,” Computational Materials Science. 2020. link Times cited: 10 USED (low confidence) L. Rysaeva, D. Lisovenko, V. Gorodtsov, and J. Baimova, “Stability, elastic properties and deformation behavior of graphene-based diamond-like phases,” Computational Materials Science. 2020. link Times cited: 19 USED (low confidence) P. Verma, B. Sharma, A. Chaurasia, and A. Parashar, “Inter-granular fracture toughness of bi-crystalline graphene nanosheets,” Diamond and Related Materials. 2020. link Times cited: 17 USED (low confidence) J. Li, B. Lu, Y. Zhang, H. Zhou, G. Hu, and R. Xia, “Nanoindentation response of nanocrystalline copper via molecular dynamics: Grain-size effect,” Materials Chemistry and Physics. 2020. link Times cited: 35 USED (low confidence) C. Zhang, C. Lu, L. Pei, J. Li, and R. Wang, “Molecular Dynamics Simulation of the Negative Poisson’s Ratio in Graphene/Cu Nanolayered Composites: Implications for Scaffold Design and Telecommunication Cables.” 2020. link Times cited: 18 Abstract: Graphene-based materials with a negative Poisson’s ratio hav… read moreAbstract: Graphene-based materials with a negative Poisson’s ratio have numerous potential applications in various fields. However, the modification of graphene is cumbersome and may worsen the mechanical properties. The scale limitation and structural instabilities of suspended graphene are also unfavorable for practical applications. In the present study, we design several nanolayered graphene/Cu composites and investigate their tensile behavior using molecular dynamics simulations. The nanolayered composites exhibit an apparent auxetic behavior without any modification of graphene, as the graphene/Cu interface can significantly enhance the surface effect and lead to an earlier phase transformation of the Cu component. A simultaneous occurrence of positive and negative Poisson's ratio can be achieved in an asymmetric composite due to the good blocking effect of graphene on two separated Cu films. Materials with simultaneous negative/positive Poisson’s ratio have potential applications in scaffold design, where it... read less USED (low confidence) D. Zhang, L. Peng, X. Li, P. Yi, and X. Lai, “Controlling the Nucleation and Growth Orientation of Nanocrystalline Carbon Films during Plasma-Assisted Deposition: A Reactive Molecular Dynamics/Monte Carlo Study.,” Journal of the American Chemical Society. 2020. link Times cited: 12 Abstract: Nanocrystalline carbon films containing preferentially orien… read moreAbstract: Nanocrystalline carbon films containing preferentially oriented graphene-based nanocrystals within an amorphous carbon matrix have attracted significant theoretical and experimental interests due to their favorable chemical and physical properties. At present, there are intense efforts to study the grain size and growth orientation of the graphene-based nanocrystals to achieve a controllable growth of nanocrystalline carbon films. However, despite the frequent use of plasma-assisted deposition techniques, the atomistic-scale mechanisms, including the effects of plasma density and energy on the nucleation process and growth orientation of the graphene-based nanocrystals, as well as associated dynamic processes involved in deposition processes, have not yet been thoroughly studied. In this paper, the plasma-assisted growth of nanocrystalline carbon thin films with preferentially oriented nanocrystals was systematically studied by hybrid molecular dynamics-Monte Carlo simulations using a recently developed force field, the charge-implicit ReaxFF. By combining the experimental data with the atomistic simulations, we reveal that plasma ion bombardments, in suitable ranges of energies and densities, allow the highest nucleation density in the nanocrystalline carbon films. Theoretically optimum windows of the plasma energy and density are first presented in the form of crystallization phase diagrams. Furthermore, to investigate the relationship between the growth orientation and the plasma ion energy, simulations of graphene irradiated with Ar ions from different incident angles were also performed. Based on the mechanism of "survival of the fittest", we proposed using the critical energy of generating the Stone-Thrower-Wales defects to design the growth orientation of graphite-like nanocrystals by controlling the plasma ion energy. read less USED (low confidence) M. Suk, “Atomistic behavior of nanoporous carbon nanotube-aluminum composite under compressive loading,” Materials Research Express. 2020. link Times cited: 5 Abstract: Metal matrix nanocomposites have been actively studied to di… read moreAbstract: Metal matrix nanocomposites have been actively studied to discover the characteristics of a new class of materials. In the present study, metal matrix nanocomposites are investigated using molecular dynamics simulations of the compressive behavior of nanoporous carbon nanotube (CNT)-aluminum (Al) composites that have a density of approximately 77% to that of pure Al. The weight-reduced nanocomposites exhibited an enhanced Young’s modulus of 138%, and a compressive strength degraded by 13% compared with pure Al. Through stress decomposition into CNT and Al constituents, it was observed that the Young’s modulus was enhanced due to the high stiffness of the CNTs; further, the reduced strength was primarily due to the early failure strain. The effects of CNT volume fractions and sizes are further analyzed using the rule of mixture, which is modified by the interphase area definition. In addition, the atomistic details of the structure and stress revealed a buckling behavior in the CNT as well as a massive slip behavior in the Al matrix during plastic deformation. The results presented in this study will have implications in the design and development of metal matrix nanocomposites for applications in high-performance lightweight materials. read less USED (low confidence) K. Krylova and L. Safina, “Hydrostatic compression as the way of property improvement of crumpled graphene: atomistic simulation,” Journal of Physics: Conference Series. 2020. link Times cited: 2 Abstract: In the present work, crumpled graphene is considered under h… read moreAbstract: In the present work, crumpled graphene is considered under hydrostatic tension by molecular dynamics simulation. Here hydrostatic compression is used in two variants: to obtain composite from crumpled graphene combined with Ni nanoparticles and to serve hydrogen inside crumpled graphene. Pressure-strain curves and structural transformations during hydrostatic compression in both cases are discussed. It is found, that hydrostatic compression at high temperatures can be very effective for Ni-graphene composite formation. The possibility of application of compressive strain to make crumpled graphene better media for hydrogen storage is discussed. It is observed that at 77 K and 300 K compression results in the considerable increase of hydrogen sorption capacity. read less USED (low confidence) L. Safina and K. Krylova, “Effect of particle size on the formation of the composite structure in Ni-graphene system: atomistic simulation,” Journal of Physics: Conference Series. 2020. link Times cited: 3 Abstract: Fabrication of Ni-graphene composite with the nanoparticles … read moreAbstract: Fabrication of Ni-graphene composite with the nanoparticles of different sizes by hydrostatic pressure at 1500 K is studied by molecular dynamics simulation. The high specific surface area of crumpled graphene allow to fill its pores by metal nanoparticles and obtain composite structure at given conditions. It is observed, that temperature exceeding melting temperature of Ni nanoparticles but considerably lower than the melting temperature of graphene lead to better mixing of the structural elements. It is found, that one of the main factors in the composite fabrication is nanoparticle size. Bigger nanoparticles fully covered by graphene flakes even at high temperatures preserve its spherical shape and retard the obtaining of the composite structure. Nanoparticles of small and average size demonstrate the much better formation of the composite. read less USED (low confidence) M. Motamedi, A. H. Naghdi, and S. Jalali, “Effect of temperature on properties of aluminum/single-walled carbon nanotube nanocomposite by molecular dynamics simulation,” Proceedings of the Institution of Mechanical Engineers, Part C: Journal of Mechanical Engineering Science. 2020. link Times cited: 21 Abstract: Composite materials have become popular because of high mech… read moreAbstract: Composite materials have become popular because of high mechanical properties and lightweight. Aluminum/carbon nanotube is one of the most important metal composite. In this research, mechanical properties of aluminum/carbon nanotube composite were obtained using molecular dynamics simulation. Then, effect of temperature on stress–strain curve of composite was studied. The results showed by increasing temperature, the Young’s modulus of composite was decreased. More specifically increasing the temperature from 150 K to 620 K, decrease the Young’s modulus to 11.7%. The ultimate stress of composite also decreased by increasing the temperature. A continuum model of composite was presented using finite element method. The results showed the role of carbon nanotube on strengthening of composite. read less USED (low confidence) P. Cao, D. Han, and C.-L. Luo, “Structure and phase transition behaviors of water in carbon nanotube under the electric field and high pressure,” Materials Research Express. 2019. link Times cited: 1 Abstract: The structure and phase transition behaviors of the confined… read moreAbstract: The structure and phase transition behaviors of the confined water in a (3, 15) carbon nanotube (CNT) (diameter = 1.26 nm) under the different axial electric fields and the ultra-high pressure P = 1 and 10 GPa were studied by perform molecular dynamics simulations. Depending on the pressure and the strength of the applied fields, the confined water presents four ice structures. Under zero of fields, the hollow 〈7, 0〉 ice nanotube (ice-NT) is the unique ice phase to the water confined in (3, 15) CNT. Applying an electric field triggers a helical water chain forming on the axis of the ice-NT. The structural order of water competes with its degree of polarization in its first–order solid-liquid phase transition. Therefore, high-intensity fields are not conductive to the formation of the ice. However, continuous phase transition tends to occur in the case of ultra-high pressure. read less USED (low confidence) B. Ni and H. Gao, “Engineer Energy Dissipation in 3D Graphene Nanolattice Via Reversible Snap-Through Instability,” Journal of Applied Mechanics. 2019. link Times cited: 1 Abstract:
Carbon micro/nanolattice materials, defined as three-dimen… read moreAbstract:
Carbon micro/nanolattice materials, defined as three-dimensional (3D) architected metamaterials made of micro/nanoscale carbon constituents, have demonstrated exceptional mechanical properties, including ultrahigh specific strength, stiffness, and extensive deformability through experiments and simulations. The ductility of these carbon micro/nanolattices is also important for robust performance. In this work, we present a novel design of using reversible snap-through instability to engineer energy dissipation in 3D graphene nanolattices. Inspired by the shell structure of flexible straws, we construct a type of graphene counterpart via topological design and demonstrate its associated snap-through instability through molecular dynamics (MD) simulations. One-dimensional (1D) straw-like carbon nanotube (SCNT) and 3D graphene nanolattices are constructed from a unit cell. These graphene nanolattices possess multiple stable states and are elastically reconfigurable. A theoretical model of the 1D bi-stable element chain is adopted to understand the collective deformation behavior of the nanolattice. Reversible pseudoplastic behavior with a finite hysteresis loop is predicted and further validated via MD. Enhanced by these novel energy dissipation mechanisms, the 3D graphene nanolattice shows good tolerance of crack-like flaws and is predicted to approach a specific energy dissipation of 233 kJ/kg in a loading cycle with no permanent damage (one order higher than the energy absorbed by carbon steel at failure, 16 kJ/kg). This study provides a novel mechanism for 3D carbon nanolattice to dissipate energy with no accumulative damage and improve resistance to fracture, broadening the promising application of 3D carbon in energy absorption and programmable materials. read less USED (low confidence) S. Yang and J. Lee, “Atomistic molecular dynamics simulation study on the mechanical behavior and dispersion of surface functionalized graphene/polypropylene nanocomposites,” Functional Composites and Structures. 2019. link Times cited: 6 Abstract: The effect of methyl surface functionalization of single-lay… read moreAbstract: The effect of methyl surface functionalization of single-layer graphene on the mechanical behavior and interfacial load transfer of polypropylene (PP) nanocomposites is studied by using molecular dynamics simulations. In the molecular model, both pristine and 20 methyl-group-functionalized graphenes are embedded into an amorphous PP matrix to constitute unit cell models of transversely isotropic periodic nanocomposites. The stress–strain curves of nanocomposites under uniaxial tension and shearing are determined based on non-equilibrium ensemble simulations with a constant true strain rate. Due to the degradation of graphene by the methyl groups, the longitudinal Young’s modulus and in-plane shear modulus of the nanocomposites are degraded. On the other hand, the longitudinal shear moduli of the nanocomposites, which depend on the interfacial shear load transfer, are considerably improved upon methyl functionalization. To establish the relationship between the improved interfacial properties in nanocomposites and methyl functionalization, the intrinsic adhesion energy between graphene and PP matrix and the arithmetic mean surface roughness of graphenes are determined and compared. The dispersibility of graphenes are also studied in terms of the solubility parameters. read less USED (low confidence) M. Kim, S. Kim, and S. Im, “Wrinkling behavior of bilayer graphene sheets bonded to an elastic foundation,” International Journal of Solids and Structures. 2019. link Times cited: 4 USED (low confidence) A. Shemukhin, A. Stepanov, A. Nazarov, and Y. Balakshin, “Simulation of defects formation in nanotubes under ion irradiation,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2019. link Times cited: 8 USED (low confidence) V. Vardanyan and H. Urbassek, “Dislocation interactions during nanoindentation of nickel-graphene nanocomposites,” Computational Materials Science. 2019. link Times cited: 28 USED (low confidence) Y. Wang, J. Lei, L. Bai, K. Zhou, and Z. Liu, “Effects of tensile strain rate and grain size on the mechanical properties of nanocrystalline T-carbon,” Computational Materials Science. 2019. link Times cited: 12 USED (low confidence) F. Dias, H. Alves, and W. S. Machado, “Investigation of the thermal conductivity in nanographene C80H30 by molecular dynamics simulation,” Computational Condensed Matter. 2019. link Times cited: 2 USED (low confidence) H. Qin, Q. Pei, Y. Liu, and Y.-W. Zhang, “Thermal transport in graphene-based layered materials: An analytical model validated with extensive molecular dynamics simulations,” Carbon. 2019. link Times cited: 16 USED (low confidence) J. Baimova, K. Krylova, and I. Lobzenko, “Graphene crumpling as a method of hydrogen storage: Simulation results.” 2019. link Times cited: 3 Abstract: Various carbon nanostructures, including graphene, are very … read moreAbstract: Various carbon nanostructures, including graphene, are very promising for application in hydrogen storage. One of the promising ways to increase the hydrogen storage capacity of graphene is crumpli... read less USED (low confidence) Q. Cao, “Thermophoresis of Nanodroplets in Deformed Carbon Nanotubes Due to Nanoindentation,” Journal of Physical Chemistry C. 2019. link Times cited: 11 Abstract: Carbon nanotubes based on mechanical deformation for control… read moreAbstract: Carbon nanotubes based on mechanical deformation for controlling mass transport have various promising potential applications in nanofluidic devices. The thermophoresis of water nanodroplets through carbon nanotubes with deformation imposed by nanoindentation is explored using molecular dynamics simulations. We find that deforming the carbon nanotubes can effectively control the thermophoretic motion of the confined droplet. When the carbon nanotubes are deformed to a certain level, the migration of the droplet is significantly limited. Under strong deformation, the exchange of water molecules between separated droplets is blocked by narrow passage. Moreover, we identify some interesting phenomena and important physical mechanisms, and explain them via the relationship between the molecular interactions between the interfacial water and the thermophoretic effect. The thermophoretic dynamics of a small droplet confined in the carbon nanotubes with a larger radius reveals that the interfacial interactions b... read less USED (low confidence) P. Wolski, P. Wojtoń, K. Nieszporek, and T. Panczyk, “Interaction of Human Telomeric i-Motif DNA with Single Walled Carbon Nanotubes. Insights from Molecular Dynamics Simulations.,” The journal of physical chemistry. B. 2019. link Times cited: 15 Abstract: This work deals with molecular dynamics simulations of human… read moreAbstract: This work deals with molecular dynamics simulations of human telomeric i-motif DNA interacting with functionalized single walled carbon nanotubes. We study two kinds of i-motifs differing by the protonation state of cytosines, i.e. unprotonated ones representative to neutral pH and with half of the cytosines protonated and representative to acidic conditions. These i-motifs interact with two kinds of carbon nanotubes differing mainly in chirality (diameter), i.e (10,0) and (20,0). Additionally, these nanotubes were on-tip functionalized by amino groups or by guanine containing residues. We found that protonated i-motif adsorbs strongly, though not specifically, on the nanotubes surfaces with its 3' and 5' ends directed towards the surface and that adsorption does not affect the i-motif shape and hydrogen bonds existing between C:C+ pairs. The functional groups on the nanotube tips have minimal effect either on position of i-motif or on its binding strength. Unprotonated i-motif, in turn, deteriorates significantly during interaction with the nanotubes and its binding strength is rather high as well. We found that (10,0) nanotubes destroy the i-motif shape faster than (20,0). Moreover the i-motif either tries to wrap the nanotube or migrates to its tip and become immobilized due to interaction with guanine residue localized on the nanotube tip and attempts to incorporate its 3' end into the nanotube interior. None hydrogen bonds exist within the unprotonated i-motif prior to and after adsorption on the nanotube. Thus, carbon nanotubes do not improve the stability of unprotonated i-motif due to simple adsorption or just physical interactions. We hypothesize that the reported in literature stabilizing effect of carbon nanotubes is due to proton transfer from the functional group in the nanotube to cytosines and subsequent formation of C:C+ pairs. read less USED (low confidence) Y. Chen, X. Wang, Y. Liu, H. Xiao, and X. Chen, “Effect of Local Terrace on Structure and Mechanics of Graphene Grain Boundary,” The Journal of Physical Chemistry C. 2019. link Times cited: 4 Abstract: In this study, the effects of local terrace of the substrate… read moreAbstract: In this study, the effects of local terrace of the substrate on the structure and mechanical properties of graphene grain boundaries (GBs) during CVD growth have been explored by phase field crystal (PFC) modeling and molecular dynamics (MD) simulations. It is found the GBs are significantly disturbed for weak surface disturbance with bulge height of only 3.4 A. The distance between GBs and bulge plays an important role in determining the morphologies of GBs, and the aperiodic and curved GBs can be observed which is attributed to several representative structures, like 5-6|6-7, 5-6-7 defects and GBs deflection. In general, there are four fracture modes for GBs with weak surface disturbance depending on the existence of 5-6-7 and 5-6|6-7 defects. While for strong surface disturbance with bulge height of 10 A, the interaction between topological defects at bulged graphene and GBs will locally offset nearby 5-7 dislocation pairs and there are two fracture modes depending on the structural integrality of GBs.... read less USED (low confidence) S. Mahmood, A. Tabassum, S. Ahbab, and S. Subrina, “Impact of Grains on Thermal Transport of Polycrystalline Graphene Nanoribbon,” 2019 IEEE International WIE Conference on Electrical and Computer Engineering (WIECON-ECE). 2019. link Times cited: 0 Abstract: We have analyzed the thermal transport characteristics in po… read moreAbstract: We have analyzed the thermal transport characteristics in polycrystalline graphene nanoribbon (GNR) employing equilibrium molecular dynamics (EMD) simulation with Adaptive Intermolecular Reactive Empirical Bond Order (AIREBO) potential. Thermal conductivity decreases with the introduction of grain boundary; in the presence of 2 grains the thermal conductivity of 10nm x 3nm polycrystalline GNR is computed to be 271.85 W/mK at room temperature. We have studied the effect of number of grains on thermal transport profile of poly GNR which decreases as more grains are introduced. Moreover, temperature dependence has been investigated in the presence of 2 and 4 grains and a decaying trend is observed. In the case of 4 grains the reduction in thermal transport is greater at low temperature. The impact of grain orientation has been studied for three different samples. Furthermore, we have also generated phonon density of states (PDOS) to support our findings. read less USED (low confidence) X. Li, H. Mizuseki, S. J. Pai, and K.-R. Lee, “Reactive molecular dynamics simulation of the amorphous carbon growth: Effect of the carbon triple bonds,” Computational Materials Science. 2019. link Times cited: 5 USED (low confidence) Z. Chang, R. Yang, and Y. Wei, “The linear-dependence of adhesion strength and adhesion range on temperature in soft membranes,” Journal of the Mechanics and Physics of Solids. 2019. link Times cited: 17 USED (low confidence) M. Nasim et al., “Deposition mechanism of graphene flakes directly from graphite particles in the kinetic spray process studied using molecular dynamics simulation,” Computational Materials Science. 2019. link Times cited: 16 USED (low confidence) L. Wang, R. Zhang, J. Shi, and K. Cai, “Vibration behavior of diamondene nano-ribbon passivated by hydrogen,” Scientific Reports. 2019. link Times cited: 4 USED (low confidence) Y. M. Jaques and D. Galvão, “Spreading patterns of high velocity nanodroplets impacting on suspended graphene,” Journal of Molecular Liquids. 2019. link Times cited: 3 USED (low confidence) K. Ghorbani, A. Rajabpour, and M. Ghadiri, “Determination of carbon nanotubes size-dependent parameters: molecular dynamics simulation and nonlocal strain gradient continuum shell model,” Mechanics Based Design of Structures and Machines. 2019. link Times cited: 34 Abstract: Knowing the size-dependent parameters is essential in contin… read moreAbstract: Knowing the size-dependent parameters is essential in continuum modeling of micro/nanostructures. In this paper, nonlocal and material length scale parameters are calibrated by comparing the natural frequencies obtained from MD simulation and nonlocal strain gradient theory. Elastic modulus of each CNT is also calculated by MD and used in the shell model. The effects of size-dependent parameters on the natural frequency and their dependency on geometry and chirality of CNTs are also investigated. It is found that in the calibration of continuum results with MD outputs, the nonlocal parameter has the dominant effect in comparison with material length scale parameter.. read less USED (low confidence) A. Impellizzeri, P. Briddon, and C. Ewels, “Stacking- and chirality-dependent collapse of single-walled carbon nanotubes: A large-scale density-functional study,” Physical Review B. 2019. link Times cited: 15 USED (low confidence) H. Huang et al., “Release of helium-related clusters through a nickel–graphene interface: An atomistic study,” Applied Surface Science. 2019. link Times cited: 5 USED (low confidence) W. Peng, K. Sun, R. Abdullah, M. Zhang, J. Chen, and J. Shi, “Strengthening mechanisms of graphene coatings on Cu film under nanoindentation: A molecular dynamics simulation,” Applied Surface Science. 2019. link Times cited: 30 USED (low confidence) M. Ilkhani and R. Nazemnezhad, “Molecular dynamics simulation and size dependent cylindrical shell models for vibrations of spinning axially loaded carbon nanotubes,” European Journal of Mechanics - A/Solids. 2019. link Times cited: 9 USED (low confidence) B. Cheng, S. Yang, H. Liu, L. Zhang, and F. Wang, “Investigation of the interaction between carbon nanotube tip and silicon sample through molecular dynamic simulation,” Chinese Journal of Physics. 2019. link Times cited: 4 USED (low confidence) I. Lobzenko, “Discrete breathers modeling from first principles in graphene and in classical approximation in fcc Ni: Comparison,” Journal of Micromechanics and Molecular Physics. 2019. link Times cited: 5 Abstract: Properties of discrete breathers are discussed from two poin… read moreAbstract: Properties of discrete breathers are discussed from two points of view: (I) the ab initio modeling in graphene and (II) classical molecular dynamics simulations in the ace-centered cubic (fcc) Ni. In the first (I) approach, the possibility of exciting breathers depends on the strain applied to the graphene sheet. The uniaxial strain leads to opening the gap in the phonon band and, therefore, the existence of breathers with frequencies within the gap. In the second (II) approach, the structure of fcc Ni supports breathers of another kind, which possess a hard nonlinearity type. It is shown that particular high frequency normal mode can be used to construct the breather by means of overlaying a spherically symmetrical function, the maximum of which coincides with the breather core. The approach of breathers excitation based on nonlinear normal modes is independent of the level of approximation. Even though breathers could be obtained both in classical and first-principles calculations, each case has advantages and shortcomings, that are compared in the present work. read less USED (low confidence) T. Han, T. Jiang, X. Wang, P. Li, L. Qiao, and X. Zhang, “Tuning the mechanical properties of nanoporous graphene: a molecular dynamics study,” Materials Research Express. 2019. link Times cited: 9 Abstract: Nanoporous graphene (NPG) has emerged as a promising choice … read moreAbstract: Nanoporous graphene (NPG) has emerged as a promising choice for the application of filtration such as seawater desalination and gas separation. In this paper, the mechanical response and the fracture behaviors of NPG under axial tensile loading were systematically investigated using classical molecular dynamics (MD) simulations. The influence of the size and spacing of the nanopores on the fundamental mechanical properties of NPG were investigated and analyzed. The results show that the nanopores can significantly weaken the Young’s modulus, ultimate strength and fracture strain of graphene, which is inherently originated from the high stress concentrations near the nanopores normal to the loading direction. In addition, it is also found that the nanopore size and spacing have significant influence on the mechanical properties of NPG. The Young’s modulus decreases with the rising nanopores spacing. Both the Young’s modulus and ultimate strength of NPG decrease as the size of the nanopores increases. These results may provide helpful guidance for the design of NPG filtration membrane with high performance. read less USED (low confidence) S. M. Mofidi, H. N. Pishkenari, M. Ejtehadi, and A. Akimov, “Role of Graphene Surface Ripples and Thermal Vibrations in Molecular Dynamics of C60,” The Journal of Physical Chemistry C. 2019. link Times cited: 13 Abstract: Nanocars are artificial molecular machines with chassis, axl… read moreAbstract: Nanocars are artificial molecular machines with chassis, axles, and wheels designed for nanoscale transport at materials’ surfaces. Understanding the dependence of surface dynamics of nanocars on the substrate’s physicochemical properties is critical to the design of the transport properties of such man-made nanoscale devices. Among the multitude of potential substrates for the nanotransporters, graphene exhibits intrinsic ripples on its surface, which may affect the surface dynamics of nanocars. In this work, we report our molecular dynamics study of motion of C60, a popular nanocar wheel, on the graphitic substrates with systematically controllable surface ripples. We find that surface ripples increase the amplitude of fullerene fluctuation in the direction normal to surface, which leads to decrease of the desorption temperature from 650 K on a double-layer graphite system with less ripples to 550 K on single-layer graphene with more ripples. The surface diffusion of C60 follows the rare hops mechanism ... read less USED (low confidence) M. H. Begum, M. Muhtashim, M. D. S. M. Jiban, T. I. Toriq, and M. A. Z. Mamun, “Temperature Dependent Thermal Conductivity of Graphene Nanoribbon (GNR) for Different Interatomic Potentials: An Equilibrium Molecular Dynamics Study,” 2019 International Conference on Computer, Communication, Chemical, Materials and Electronic Engineering (IC4ME2). 2019. link Times cited: 1 Abstract: The thermal conductivity of Graphene Nanoribbon (GNR) of siz… read moreAbstract: The thermal conductivity of Graphene Nanoribbon (GNR) of size 10nm×2nm is investigated in our study for different interatomic potentials by varying the temperature in the range of 200K to 600 K. In our study, we have considered Tersoff-2010, REBO, AIREBO and Tersoff-original potentials that are widely used to model the interatomic forces present in any C-C system. The highest room temperature (RT) average thermal conductivity of GNR reported in our study using tersoff2010 potential is 1865 $Wm^{-1}K^{-1}$. To validate our simulated results, we have also calculated the phonon density of states (PDOS) for all the potentials at RT. Our calculated PDOS for Tersoff-2010 potential shows many peaks at different frequencies which mostly resembles the experimental results. Therefore, our study strengthens the application of Tersoff-2010 to model the interatomic potential for any Graphene based system. Moreover, the high thermal conductivity of GNR found in our study for all the potentials suggests the application of GNR in many electronic and optoelectronic devices. read less USED (low confidence) H. Li and W. K. Kim, “Role of multigrain structure on friction of graphene layers,” Computational Materials Science. 2019. link Times cited: 5 USED (low confidence) S. Kumar, S. K. Pattanayek, and S. Das, “Reactivity-Controlled Aggregation of Graphene Nanoflakes in Aluminum Matrix: Atomistic Molecular Dynamics Simulation,” The Journal of Physical Chemistry C. 2019. link Times cited: 10 Abstract: Aluminum graphene nanoflakes composite depicts many useful p… read moreAbstract: Aluminum graphene nanoflakes composite depicts many useful properties such as excellent mechanical strength, lightweight, high electrical, thermal properties, etc. Aggregation and dispersion of graphene nanoflakes in aluminum matrix highly influence the above-mentioned properties. In this paper, aggregation of graphene nanoflakes in aluminum matrix has been studied using molecular dynamics simulation. During simulations, adaptive intermolecular reactive empirical bond order (AIREBO) and embedded atom method force field were used for graphene nanoflakes and aluminum, respectively. AIREBO potential is capable of reproducing sp2–sp2 (covalent) bond formation or breaking between the reactive edge of graphene nanoflakes. The reactive edges of graphene nanoflakes form covalent bond with the neighboring graphene that produces a unique interconnected network in aluminum matrix. However, reactivity of graphene edge exclusively depends on the interfacial interaction between graphene and aluminum. Further, interfaci... read less USED (low confidence) P. Ying, Y. Zhao, and H. Tan, “Study on collapse controlling of single-wall carbon nanotubes by helium storage,” Computational Materials Science. 2019. link Times cited: 2 USED (low confidence) S.-J. Guo and Q. Yang, “Multistability of armchair single-walled carbon nanotubes: a molecular dynamics investigation,” Materials Research Express. 2019. link Times cited: 0 Abstract: We report by molecular dynamics (MD) that the armchair singl… read moreAbstract: We report by molecular dynamics (MD) that the armchair single-walled carbon nanotubes (ACNTs) has a multistability rather than bistability as the diameters are above a threshold value of about 3.5 nm. The present work demonstrates that ACNTs have four stable states when the diameters are above the threshold value. The newly found stable states are caused by surface van der Waals forces. We also find the transformation between different stable states can be realized by external loading or temperature. These imply the ACNTs have a great potential application in the future nanoscale devices. read less USED (low confidence) S. Weng et al., “Anisotropic and asymmetric deformation mechanisms of nanolaminated graphene/Cu composites,” Nano Materials Science. 2019. link Times cited: 19 USED (low confidence) F. Zheng and F. Duan, “Atomistic mechanism of the weakened wear resistance of few-layer graphene induced by point defects,” Tribology International. 2019. link Times cited: 26 USED (low confidence) G.-R. Han, T. Chang, and J.-W. Jiang, “Directional Motion of a Graphene Sheet on Graded MoS2–WSe2 Lateral Heterostructures,” Journal of Applied Mechanics. 2019. link Times cited: 3 Abstract: Directional motion is one of the most fundamental motions in… read moreAbstract: Directional motion is one of the most fundamental motions in the nature, which is driven by specific types of gradients. The transition metal dichalcogenides graded lateral heterostructure is a valuable semiconductor playing crucial roles in electronic and optoelectronic devices. This lateral heterostructure has a graded composition and is thus a promising candidate to drive possible directional motions. Here, we perform molecular dynamics simulations to demonstrate the directional motion of a graphene sheet on top of the MoS2–WSe2 graded lateral heterostructure. It is quite interesting that the direction for the diffusion is sensitive to the graphene sheet’s initial location, which is in two different regions. The graphene sheet diffuses in opposite directions for the initial location that falls in different regions. We derive an analytic formula for the interlayer coupling potential, which discloses the underlying mechanism for the dependence of the directional motion on the initial location of the graphene sheet. These results shall be varifiable by present experimental set ups and may be valuable for the application of the transition metal dichalcogenides graded lateral heterostructure in practical electronic devices. read less USED (low confidence) K. Krylova, J. Baimova, R. Murzaev, and R. Mulyukov, “Energy exchange between discrete breathers in graphane in thermal equilibrium,” Physics Letters A. 2019. link Times cited: 7 USED (low confidence) S. P. Patil, “Nanoindentation of Graphene-Reinforced Silica Aerogel: A Molecular Dynamics Study,” Molecules. 2019. link Times cited: 16 Abstract: In the present work, we performed nanoindentation tests usin… read moreAbstract: In the present work, we performed nanoindentation tests using molecular dynamics (MD) simulations on graphene, native silica aerogels, and single- and multi-layered graphene-reinforced silica aerogel nanocomposites. This work mainly focused on the two aspects of nanoindentation simulations: first, the resultant indentation force–depth curves, and second, the associated mechanical deformation behavior. We found that in the single-layer graphene-reinforced silica aerogel nanocomposite, the indentation resistance was four-fold that of native silica aerogels. Moreover, the combined system proved to be higher in stiffness compared to the individual material. Furthermore, the indentation resistance was increased significantly as we proceeded from single- to two-layered graphene-reinforced silica aerogel nanocomposites. The results of the study provide a detailed understanding of the mechanical behavior during the indentation tests of nanocomposites, which helps to design advanced nanoscale multi-layered materials. read less USED (low confidence) L. Yang, K. Cai, J. Shi, Y. Xie, and Q. Qin, “Nonlinear dynamic behavior of a clamped–clamped beam from BNC nanotube impacted by fullerene,” Nonlinear Dynamics. 2019. link Times cited: 12 USED (low confidence) X. Zhao and H. Jin, “Investigation of hydrogen diffusion in supercritical water: A molecular dynamics simulation study,” International Journal of Heat and Mass Transfer. 2019. link Times cited: 79 USED (low confidence) E. Tangarife, R. I. González, C. Cárdenas, E. Bringa, and F. Muñoz, “Molecular simulations of carbon allotropes in processes with creation and destruction of chemical bonds,” Carbon. 2019. link Times cited: 8 USED (low confidence) J. Cao, Y. Wang, J. Chai, and J. Shi, “Nano-peapods from C60-encapsulated CNTs driving self-assembly of phosphorus nanotube: A molecular dynamics study,” Computational Materials Science. 2019. link Times cited: 5 USED (low confidence) X. Li, A. Wang, and K.-R. Lee, “Insights on low-friction mechanism of amorphous carbon films from reactive molecular dynamics study,” Tribology International. 2019. link Times cited: 37 USED (low confidence) W. Peng, K. Sun, M. Zhang, J. Shi, and J. Chen, “Effects of graphene coating on the plastic deformation of single crystal copper nano-cuboid under different nanoindentation modes,” Materials Chemistry and Physics. 2019. link Times cited: 12 USED (low confidence) H. Parsapour, S. Ajori, R. Ansari, and S. Haghighi, “Tensile characteristics of single-walled carbon nanotubes endohedrally decorated with gold nanowires: A molecular dynamics study,” Diamond and Related Materials. 2019. link Times cited: 12 USED (low confidence) J. Gu, L. Huang, and W. Shi, “Atomic simulations of effect on thermal conductivity of ion-irradiated graphene,” Physica B: Condensed Matter. 2019. link Times cited: 1 USED (low confidence) E. Y. Ang, T. Ng, J. Yeo, Z. Liu, R. Lin, and K. Geethalakshmi, “Effects of oscillating pressure on desalination performance of transverse flow CNT membrane,” Desalination. 2019. link Times cited: 12 USED (low confidence) S. Ajori, H. Parsapour, and R. Ansari, “Stability analysis of endohedrally functionalized carbon nanotubes with pentagonal metallic nanowires: a molecular dynamics simulation approach,” Materials Research Express. 2019. link Times cited: 8 Abstract: The endohedral functionalization of single-walled carbon nan… read moreAbstract: The endohedral functionalization of single-walled carbon nanotubes with molecular species, nanowires (NWs) and nanoparticles is of great importance for fabrication and development of nanoelecronic devices, drug delivery and energy storage applications. This research intends to explore the axial buckling behavior of the endohedrally functionalized single-walled carbon nanotubes (SWCNTs) by various metallic NWs (mNW@SWCNT), i.e. aluminum, copper, iron, sodium, nickel (AlNW, CuNW, FeNW, NaNW, NiNW), considering all possible pentagonal configurations. Employing the molecular dynamics (MD) simulations, the results demonstrate that the structurally stable radius of SWCNTs for successful endohedral functionalization of SWCNTs with pentagonal NWs are different. Considering buckling analysis of models, it is observed that NWs, solely, cannot tolerate any axial compressive load and their structure becomes dramatically unstable under mechanical force. By inserting NWs inside SWCNTs, their pentagonal structures during simulation are preserved due to Vdw interaction of NW and SWCNT until buckling occurs. Moreover, the buckling simulation results indicate that by increasing the length, the critical force of mNW@SWCNT decreases and approximately tends to that of pure SWCNTs which is more considerable for AlNWs. Also, in the particular length, the encapsulation of NWs inside the SWCNTs causes a considerable increase in the critical buckling forces particularly in smaller lengths. According to the attained results, functionalization of SWCNTs with E and S configuration of AlNWs improves the structural stability of SWCNTs more pronounced than other pentagonal NWs. read less USED (low confidence) D. K. Bommidi, R. Dhumal, and I. Salehinia, “Study of the thermal conductivity of a metal-coated multi-walled carbon nanotube using molecular dynamics atomistic simulations,” MRS Advances. 2019. link Times cited: 2 Abstract: Thermal conductivity of a nickel-coated tri-wall carbon nano… read moreAbstract: Thermal conductivity of a nickel-coated tri-wall carbon nanotube was studied using molecular dynamics where both the phonon and electron contributions were considered. Simulations predicted a significant effect of the metal coating on the thermal conductivity, i.e. 50% decrease for 1.2 nm of Ni coating. However, the decreasing rate of the thermal conductivity is minuscule for the metal thicker than 1.6 nm. The smaller thermal conductivity of the metal coating, phonon scattering at the interface, and less impacted heat transfer on the inner tubes of the carbon nanotube rationalized the observed trends. read less USED (low confidence) Y. Zhou, W. Jiang, X.-Q. Feng, D. Li, Q. Qin, and X.-bo Liu, “In-plane compressive behavior of graphene-coated aluminum nano-honeycombs,” Computational Materials Science. 2019. link Times cited: 8 USED (low confidence) Y. Li, A. Wang, and J. Shi, “Gap effect on stable rotation of a carbon nanotube nearby diamond needles,” Computational Materials Science. 2019. link Times cited: 8 USED (low confidence) K. Skrobas, S. Stelmakh, S. Gierlotka, and B. Palosz, “A model of density waves in atomic structure of nanodiamond by molecular dynamics simulations,” Diamond and Related Materials. 2019. link Times cited: 10 USED (low confidence) J. Zhan et al., “Tensile deformation of nanocrystalline Al-matrix composites: Effects of the SiC particle and graphene,” Computational Materials Science. 2019. link Times cited: 20 USED (low confidence) K. Hasz, Z. Ye, A. Martini, and R. Carpick, “Experiments and simulations of the humidity dependence of friction between nanoasperities and graphite: The role of interfacial contact quality,” Physical Review Materials. 2018. link Times cited: 26 Abstract: We use atomic force microscopy and Grand Canonical Monte Car… read moreAbstract: We use atomic force microscopy and Grand Canonical Monte Carlo atomistic simulations to study stick-slip friction of tetrahedral amorphous carbon (ta-C) probes sliding against highly oriented pyrolytic graphite (HOPG) at relative humidities ranging from <1% to near saturation. Friction varies with humidity in a non-monotonic manner such that water acts as a lubricant only above a threshold humidity; below that threshold, water increases friction substantially relative to dry sliding. Adhesion forces also show a similar non-monotonic behavior. A non-monotonic dependence of friction and adhesion on humidity for single asperity interfaces has previously 2 been attributed to the humidity-dependent adhesion force due to the water meniscus that forms at the contact, which is presumed to increase the solid-solid contact area. However, our simulations show no such increase in solid-solid contact area, but do show a small, continuous increase in tip-sample separation as humidity increases. Experimentally, no significant change in lateral stiffness is observed with humidity. All of this contradicts the hypothesis that the friction increase is due to capillary adhesion increasing the contact area. We show that water molecules are present between the tip and sample in increasing numbers as the humidity increases. From this, we attribute the non-monotonic friction trend to the changing quality of the contact between the water and the substrate, quantified by the number of water molecules in the interface and their registry with the HOPG surface atoms, which in simulations also shows a non-monotonic trend with humidity. Hysteresis observed in the variation of friction with humidity in both experiments and simulations is explained by the larger energy barrier for surface desorption of water molecules compared to adsorption. read less USED (low confidence) C. L. Wu, H.-T. Lin, H.-A. Chen, S.-Y. Lin, M. Shih, and C. Pao, “Defect formation and modulation during patterning supported graphene sheets using focused ion beams,” Materials Today Communications. 2018. link Times cited: 6 USED (low confidence) M. Dewapriya and R. Rajapakse, “Atomistic and continuum modelling of stress field at an inhomogeneity in graphene,” Materials & Design. 2018. link Times cited: 7 USED (low confidence) A. Vashisth, C. M. Ashraf, C. Bakis, and A. V. van Duin, “Effect of chemical structure on thermo-mechanical properties of epoxy polymers: Comparison of accelerated ReaxFF simulations and experiments,” Polymer. 2018. link Times cited: 37 USED (low confidence) L. Rysaeva, A. I. Klyavlina, F. K. Galiachmetov, J. Baimova, D. Lisovenko, and V. Gorodtsov, “Deformation behaviour of re-entrant carbon honeycomb structures,” IOP Conference Series: Materials Science and Engineering. 2018. link Times cited: 3 Abstract: Recent successes of researchers in the fabrication of new ca… read moreAbstract: Recent successes of researchers in the fabrication of new carbon structures of different morphologies and dimensions open up broad prospects for the development of carbon materials with qualitatively new properties. Such promising materials are cellular structures (or carbon aerogels) that have high deformability, good adsorption and conductivity characteristics. In this work, we consider a carbon structure consisting of re-entrant honeycomb cells, which allow the structure to be auxetic. The stability and deformation behaviour of re-entrant carbon honeycomb structures is studied by molecular dynamics simulation. The effect of structural parameters on the stability of carbon aerogel is discussed. It is shown that structural changes significantly depend on the strain rate and the loading direction. At a high strain rate in tension along the z-axis, all cells open slightly at the same time. On the contrary, at small strain rates, certain cells open, while others almost completely collapse, which is expected to result in changes in physical properties, for example, in conductivity. During tension along the x-axis, a transformation from a re-entrant honeycomb to a traditional honeycomb took place. read less USED (low confidence) L. Bai, P. Sun, B. Liu, Z. Liu, and K. Zhou, “Mechanical behaviors of T-carbon: A molecular dynamics study,” Carbon. 2018. link Times cited: 26 USED (low confidence) Z. Wang et al., “Liquid-liquid phase transition in nanoconfined Si-rich SiO2 liquids,” Computational Materials Science. 2018. link Times cited: 2 USED (low confidence) Y. Qi, J. Liu, Y. Dong, X.-Q. Feng, and Q. Li, “Impacts of environments on nanoscale wear behavior of graphene: Edge passivation vs. substrate pinning,” Carbon. 2018. link Times cited: 58 USED (low confidence) W. Zhang, L. Li, G. Zhang, and S. Zhang, “Interfacial structure and wetting behavior of water droplets on graphene under a static magnetic field,” Journal of Molecular Liquids. 2018. link Times cited: 10 USED (low confidence) H. Zhang and S. W. Cranford, “In‐Plane Mechanically Gradated 2D Materials: Exploring Graphene/SiC/Silicene Transition via Full Atomistic Simulation,” Advanced Theory and Simulations. 2018. link Times cited: 3 Abstract: The emergence of 2D materials has resulted in many platforms… read moreAbstract: The emergence of 2D materials has resulted in many platforms with promising applications. One possibility is to combine two (or more) systems in a multilayered structure. However, can such materials transition in‐plane? Here, the potential of graded transition from graphene to silicene, via 2D silicon carbide is explored. The work focuses on mechanical performance of a two‐phase gradated system under uniaxial stress. The percentage of the carbon/silicon in‐plane, to explore the resulting effects on strength and stiffness using full atomistic molecular dynamics (MD) is varied. Carbon atom placement of 0% to 100% in nine increments with random substitution, is tested using both single‐bond and mixed‐bond homogeneous and two‐phase gradated models. Stiffness and strength can be predicted by a simple model accounting for proportional bond distributions. It is demonstrated that the inclusion of nominal amounts of Si–C bonding results in drastic changes in mechanical response when compared to graphene, tolerant to change across a wide range of distributions, suggesting a “weakest link” effect. For the two‐phase gradated systems, stress contour plots correlate with changes in silicon‐to‐carbon ratios. The work demonstrates the feasibility of a new class of 2D in‐plane gradated materials with tunable stiffness, predictable strength, and controlled failure. read less USED (low confidence) A. Narjabadifam, F. Vakili-Tahami, and M. Zehsaz, “Elastic and failure properties of carbon nanocones using molecular dynamics simulation,” Fullerenes, Nanotubes and Carbon Nanostructures. 2018. link Times cited: 2 Abstract: Possessing excellent properties and as a promising nanofille… read moreAbstract: Possessing excellent properties and as a promising nanofiller in nanocomposites, the mechanical properties of closed-tip carbon nanocones under tension are investigated in this paper using molecular dynamics simulation. The influence of different parameters such as apex angle, length, and number of layers on the elastic and failure properties is studied. The results indicate the significant dependence of the mechanical properties on the apex angle. Moreover, the results reveal that the Young’s modulus of carbon nanocones is almost unaffected by their length and depends on the number of layers and apex angle. The transfer of load from outer to inner layers and its distribution between different layers are also investigated. It is found that the load transfer increases with increasing length and apex angle of multi-walled carbon nanocones. read less USED (low confidence) V. Singla, A. Verma, and A. Parashar, “A molecular dynamics based study to estimate the point defects formation energies in graphene containing STW defects,” Materials Research Express. 2018. link Times cited: 21 Abstract: In the present article, molecular dynamics based simulations… read moreAbstract: In the present article, molecular dynamics based simulations have been performed to estimate the vacancy formation and displacement threshold energies in a defective graphene nanosheet. Pristine graphene is a hypothetical concept, as its synthesis often results in a nanosheet containing various geometrical and atomic defects such as grain boundaries and dislocations. Stone Thrower Wales, a type of defect that are either present in grain boundaries or generated through experimental means such as ion beam and electron beam irradiation techniques. The simulations performed in this investigation shall help in the characterization and determining suitability of defective graphene with STW defects for radiation shielding purposes and future space research. Moreover, this study will be valuable in bringing new insights for guiding and modifying the design of graphene-based nanomaterials exposed to radiation environments. read less USED (low confidence) D. Gulmez, Y. Yildiz, and M. Kırca, “Nanoporous gold reinforced with carbon based nanomaterials: A molecular dynamics study,” Composites Part B: Engineering. 2018. link Times cited: 7 USED (low confidence) S. Ajori, H. Parsapour, and R. Ansari, “Vibrational analysis of single-walled carbon nanotubes filled with gold nanowires using MD simulations,” Physica E: Low-dimensional Systems and Nanostructures. 2018. link Times cited: 10 USED (low confidence) S. Safaei, R. Tavakoli, and M. Jafary-Zadeh, “Molecular dynamics study of two dimensional silicon dioxides with in-plane negative Poisson’s ratio,” Computational Materials Science. 2018. link Times cited: 9 USED (low confidence) J. Shi, K. Cai, and Y. Xie, “Thermal and tensile properties of diamondene at finite temperature: A molecular dynamics study,” Materials & Design. 2018. link Times cited: 25 USED (low confidence) A. Juneja and G. Rajasekaran, “Effect of temperature and strain-rate on mechanical properties of defected graphene sheet: A molecular dynamics study,” IOP Conference Series: Materials Science and Engineering. 2018. link Times cited: 2 Abstract: Graphene, a one atom thick sheet of carbon exhibits outstand… read moreAbstract: Graphene, a one atom thick sheet of carbon exhibits outstanding mechanical properties, but defects which are unavoidable at the time of synthesis may strongly affect, such as intrinsic properties and fracture toughness of graphene can be altered by topological defects such as vacancy, Stone-Thrower-Wales (STW) defects, dislocations and grain boundaries. In this research article, authors have extensively studied the effect of Stone-Thrower-Wales defect on mechanical properties of a single layer of graphene sheet at different temperature and strain-rates using classical molecular dynamics (MD) based simulations. Also, authors have studied the effect of defect-concentration on the mechanical properties of graphene at different temperature and strain rates. It has been observed that fracture strength and strain is not varying with temperature for STW-1 in zigzag direction and STW-2 in armchair direction respectively. Also, the same scenario was observed for different strain-rate values. Further-more it was observed that at 1K both STW-1 and STW-2 defects shows almost same fracture strength and strain in armchair and zigzag directions for higher strain-rates. On the other hand, at lower strain-rates both STW-1 and STW-2 defects showed different fracture strength and strain at 1K. Also, it was observed that at higher temperatures STW-1 in armchair direction and STW-2 in zigzag direction shows enormous decrease in mechanical properties, it shows STW-1 and STW-2 are not favourable in armchair and zigzag directions respectively. In addition, the effect of defects at different strain-rates and concentration on the fracture strength and failure morphology of graphene sheet has also been studied. read less USED (low confidence) Q. Zhao, Y. Li, Z. Zhang, and X. Ouyang, “Sputtering of Graphite by Hydrogen Isotopes in the Fusion Environment: A Molecular Dynamics Simulation Study,” Journal of Nuclear Engineering and Radiation Science. 2018. link Times cited: 0 Abstract: The sputtering of graphite due to the bombardment of hydroge… read moreAbstract: The sputtering of graphite due to the bombardment of hydrogen isotopes is crucial to successfully using graphite in the fusion environment. In this work, we use molecular dynamics to simulate the sputtering using the large-scale atomic/molecular massively parallel simulator (lammps). The calculation results show that the peak values of the sputtering yield are between 25 eV and 50 eV. When the incident energy is greater than the energy corresponding to the peak value, a lower carbon sputtering yield is obtained. The temperature that is most likely to sputter is approximately 800 K for hydrogen, deuterium, and tritium. Below the 800 K, the sputtering yields increase with temperature. By contrast, above the 800 K, the yields decrease with increasing temperature. Under the same temperature and incident energy, the sputtering rate of tritium is greater than that of deuterium, which in turn is greater than that of hydrogen. When the incident energy is 25 eV, the sputtering yield at 300 K increases below an incident angle at 30 deg and remains steady after that. read less USED (low confidence) Z. Han, Q. Shi, H. Gong, Z. Zhang, and J. Wu, “Mechanical strength in hierarchically polycrystalline graphene with dislocation arrays-embedded grains,” Materials Research Express. 2018. link Times cited: 5 Abstract: Nanotwinning lamellae within crystalline grains strengthens … read moreAbstract: Nanotwinning lamellae within crystalline grains strengthens 3D polycrystalline solids due to inactive dislocation-slips by nanotwinning. 2D graphene with twin grain boundaries formed by pentagon-heptagon dislocation lines (PHDLs) exhibits high strength comparable to pristine lattice. However, the role of PHDLs embedded within 2D polycrystalline grains on the mechanical properties of graphene remains unknown yet. Here, hierarchically polycrystalline graphene comprising of a variety of PHDLs-embedded grains are constructed and their tensile properties are explored by atomistic simulations. Relaxed hierarchical polycrystals composed of PHDLs-contained grains are hierarchically wrinkled, with unique surface wrinkles of grains nested within irregularly global wrinkles, in contrast to the conventional counterparts. Tensile strengths of PHDLs-contained polycrystals are type of PHDLs dependent; those with robust PHDLs are as strong as the intragain PHDLs-free counterpart. All hierarchical polycrystals demonstrate inverse pseudo Hall-Petch-like strength relations to grain size, analogous to the counterpart yet in contrast to nanotwinned polycrystals. However, depending on the type of PHDLs, either monotonous or ‘flipped’ variation in the breaking strains with grain size is observed. Four distinct cracking behaviors are identified relying on the robustness of PHDLs. Particularly, tension-induced broken bonds shared by hexagon-heptagon near the PHDLs are recoverable. These findings shed new light in the optimal performance of 2D materials through dislocation engineering for practical applications in flexible systems. read less USED (low confidence) S. Sihn, A. Roy, and B. Farmer, “Quantized prediction of coefficients of thermal expansion of 3-D CNT-Graphene junctioned carbon nanostructures,” Composites Science and Technology. 2018. link Times cited: 5 USED (low confidence) A. Wei, Q. Liu, H. Yao, Y. Li, and Y. Li, “Principles and Mechanisms of Strain-Dependent Thermal Conductivity of Polycrystalline Graphene with Varying Grain Sizes and Surface Hydrogenation,” The Journal of Physical Chemistry C. 2018. link Times cited: 7 Abstract: In this paper, the thermal conductivities (κ) of polycrystal… read moreAbstract: In this paper, the thermal conductivities (κ) of polycrystalline graphene (PG) with varying average grain size are investigated using reverse nonequilibrium molecular dynamics method. Due to the presence of grain boundary (GB), the κ of PG is found to depend on the average grain size as well as in-plane strain and hydrogenation coverage. The principles and mechanisms for the change of κ with in-plane strain and surface hydrogenation are interpreted combining the thermal transport theory and phonon density of states (PDOS) analysis. The thermal property of PG under tension is found to be related with the average stress in PG as a result of the suppression of mean free path (MFP) and the softening of phonon modes. PG with fine grains exhibits more reduction of κ than the PG with coarse grains does under the same tensile strain due to the more stress concentration at GBs. The mechanism is also revealed for the size effect on the thermal property of PG under compression. Additionally, the dependency of κ on t... read less USED (low confidence) X. Qin, W. Yan, X. Guo, T. Gao, and Q. Xie, “Molecular Dynamics Simulations of Si ion Substituted Graphene by Bombardment,” IOP Conference Series: Materials Science and Engineering. 2018. link Times cited: 1 Abstract: Molecular dynamics simulations with Tersoff-Ziegler-Biersack… read moreAbstract: Molecular dynamics simulations with Tersoff-Ziegler-Biersack-Littmark (Tersoff-ZBL) potential and adaptive intermolecular reactive empirical bond order (AIREBO) potential are performed to study the substitutional process of silicon ions by bombardment. The silicon ions bombardment of graphene is simulated at energies 100 eV, 100 eV, 68 eV and 67 eV, respectively. All silicon atoms are substitute for the relevant carbon atoms at these energies. And a perfect region of SiC structure in graphene sheet is observed, this approach can viewed as a new preparation of graphene-based SiC electronics in theory. read less USED (low confidence) M. Ghadiri, A. Rajabpour, and A. Akbarshahi, “Non-linear vibration and resonance analysis of graphene sheet subjected to moving load on a visco-Pasternak foundation under thermo-magnetic-mechanical loads: An analytical and simulation study,” Measurement. 2018. link Times cited: 18 USED (low confidence) Z. Kang and B. Wu, “Coalescence of gold nanoparticles around the end of a carbon nanotube: A molecular-dynamics study,” Journal of Manufacturing Processes. 2018. link Times cited: 5 USED (low confidence) B. Mobedpour, S. Rajabdoust, and R. Roumina, “Melting of graphene supported Pd-Pt core-shell nanoparticles: A molecular dynamics study,” Computational Materials Science. 2018. link Times cited: 4 USED (low confidence) X. Li, A. Wang, and K.-R. Lee, “Comparison of empirical potentials for calculating structural properties of amorphous carbon films by molecular dynamics simulation,” Computational Materials Science. 2018. link Times cited: 30 USED (low confidence) H. Ghasemi, A. Rajabpour, and A. Akbarzadeh, “Tuning thermal conductivity of porous graphene by pore topology engineering: Comparison of non-equilibrium molecular dynamics and finite element study,” International Journal of Heat and Mass Transfer. 2018. link Times cited: 31 USED (low confidence) L. Wang and F. Duan, “Nanoscale wear mechanisms of few-layer graphene sheets induced by interfacial adhesion,” Tribology International. 2018. link Times cited: 27 USED (low confidence) K. Cai, L. Wang, and Y. Xie, “Buckling behavior of nanotubes from diamondene,” Materials & Design. 2018. link Times cited: 31 USED (low confidence) X. Yuan and Y. Wang, “Radial deformation of single-walled carbon nanotubes adhered to solid substrates and variations of energy: Atomistic simulations and continuum analysis,” International Journal of Solids and Structures. 2018. link Times cited: 8 USED (low confidence) R. Nazemnezhad, M. Zare, and S. Hosseini-Hashemi, “Effect of nonlocal elasticity on vibration analysis of multi-layer graphene sheets using sandwich model,” European Journal of Mechanics - A/Solids. 2018. link Times cited: 8 USED (low confidence) A. Sgouros, G. Kalosakas, G. Kalosakas, K. Papagelis, and C. Galiotis, “Compressive response and buckling of graphene nanoribbons,” Scientific Reports. 2018. link Times cited: 22 USED (low confidence) M. Maurya and J. Singh, “Treatment of Flue Gas using Graphene Sponge: A Simulation Study,” The Journal of Physical Chemistry C. 2018. link Times cited: 13 Abstract: Grand canonical Monte Carlo simulations are conducted to inv… read moreAbstract: Grand canonical Monte Carlo simulations are conducted to investigate the adsorption ability of a 3-D graphene sponge (GS) to separate acidic gases from flue gas stream. To assess the adsorption capacity of GS, first, adsorption of pure component flue gas is studied at a temperature of 303 K and varying pressure up to 2.5 bar. Subsequently, the adsorption capacity and selectivity of GS are investigated for a ternary mixture (CO2/SO2/N2) of flue gas under the same conditions. This study shows that the maximum adsorption capacity of GS for pure component flue gas is observed for SO2 followed by CO2 and N2. The adsorption uptake decreases with an increase in pore size of GS. At 1 bar, the amount of adsorption of SO2 and CO2 are ∼13 mmol/g and ∼2.6 mmol/g, respectively. Upon increasing the average pore size to 20 A, the excess amount decreases by 56% and 58% for SO2 and CO2, respectively. The adsorption capacities of GS for CO2 and SO2 are better than other carbon-based adsorbents except for CNT bundles. In th... read less USED (low confidence) F. Dias and W. S. Machado, “The effects of computational time parameter in the thermal conductivity of single-walled carbon nanotubes by molecular dynamics simulation,” Computational Condensed Matter. 2018. link Times cited: 4 USED (low confidence) M. Kim and S. Im, “Buckling of multilayer graphene sheets subjected to axial compression based on a continuum mechanics model,” Journal of Applied Mechanics. 2018. link Times cited: 5 USED (low confidence) S. H. Boroushak, R. Ansari, and S. Ajori, “Molecular dynamics simulations of the thermal conductivity of cross-linked functionalized single- and double-walled carbon nanotubes with polyethylene chains,” Diamond and Related Materials. 2018. link Times cited: 25 USED (low confidence) J. Xu, S. Dai, H. Li, and J. Yang, “Molecular dynamics simulation of the thermal conductivity of graphitized graphene/polyimide films,” New Carbon Materials. 2018. link Times cited: 7 USED (low confidence) P. Gong, Z. Ye, L. Yuan, and P. Egberts, “Evaluation of wetting transparency and surface energy of pristine and aged graphene through nanoscale friction,” Carbon. 2018. link Times cited: 31 USED (low confidence) N. Mai and S. Choi, “Atomic-scale mutual integrals for mixed-mode fracture: Abnormal fracture toughness of grain boundaries in graphene,” International Journal of Solids and Structures. 2018. link Times cited: 13 USED (low confidence) A. Alian and S. Meguid, “Large-scale atomistic simulations of CNT-reinforced thermoplastic polymers,” Composite Structures. 2018. link Times cited: 23 USED (low confidence) R. Dongol, L. Wang, A. Cormack, and S. Sundaram, “Molecular dynamics simulation of sodium aluminosilicate glass structures and glass surface-water reactions using the reactive force field (ReaxFF),” Applied Surface Science. 2018. link Times cited: 36 USED (low confidence) J. Liu, T. Liang, W. Lai, and Y. Liu, “Morphology evolution and defect distribution in irradiated graphite from molecular dynamics,” Computational Materials Science. 2018. link Times cited: 3 USED (low confidence) X. Yuan, Y. Wang, and B. Zhu, “Adhesion between two carbon nanotubes: Insights from molecular dynamics simulations and continuum mechanics,” International Journal of Mechanical Sciences. 2018. link Times cited: 12 USED (low confidence) R. Delaunay et al., “Shock-driven formation of covalently bound carbon nanoparticles from ion collisions with clusters of C-60 fullerenes,” Carbon. 2018. link Times cited: 8 USED (low confidence) J. Tian, W. Zhou, Q. Feng, and J. Zheng, “Molecular dynamics simulations with electronic stopping can reproduce experimental sputtering yields of metals impacted by large cluster ions,” Applied Surface Science. 2018. link Times cited: 12 USED (low confidence) M. M. Sedghi and M. Piri, “Capillary condensation and capillary pressure of methane in carbon nanopores: Molecular Dynamics simulations of nanoconfinement effects,” Fluid Phase Equilibria. 2018. link Times cited: 25 USED (low confidence) B. Jayasena and S. Melkote, “A Molecular Dynamics Study of PDMS Stamp-Based Graphene Exfoliation,” Journal of Micro and Nano-Manufacturing. 2018. link Times cited: 3 USED (low confidence) Y. Zheng, J. Sun, H. Ye, J. Zhang, and H. W. Zhang, “Crystallization behaviors and mechanical properties of carbon nanotube encapsulated copper nanowires,” Computational Materials Science. 2018. link Times cited: 4 USED (low confidence) P.-Y. Yang, S. Ju, S. Ju, and S. Huang, “Predicted structural and mechanical properties of activated carbon by molecular simulation,” Computational Materials Science. 2018. link Times cited: 9 USED (low confidence) G. Shi, Y. He, J. W. Zhang, and D. Jiang, “Tensile Properties of Carbon Nanoring Linked Graphene Sheets: A Molecular Dynamics Investigation,” Materials Science Forum. 2018. link Times cited: 3 Abstract: The effects of CNR diameter and CNR number on tensile proper… read moreAbstract: The effects of CNR diameter and CNR number on tensile properties of the CNR-graphene hybrid structure (CGHS) were studied by molecular dynamics simulation in this paper. Results show that interactions between adjacent graphene sheets are significantly strengthened by the cross-linked CNRs. For CGHSs, the maximum strength is ~64.0 GPa and the maximum Young’s modulus strength is ~763 GPa. When the diameter of CNRs is large or the CNR linkers are dense, the tensile strength of CGHSs reached the maximum and the fracture mechanism of CGHSs changed from CNR-graphene junction fracture to graphene sheet fracture. Present work should serve as guide to experiments concerning physical properties of this novel material. read less USED (low confidence) L. Sun, X. He, and J. Lu, “Understanding the mechanical characteristics of nanotwinned diamond by atomistic simulations,” Carbon. 2018. link Times cited: 18 USED (low confidence) Y. Zhang, Q. Liu, and B. Xu, “Self-Folding Mechanics of Surface Wettability Patterned Graphene Nanoribbons by Liquid Evaporation,” Journal of Applied Mechanics. 2018. link Times cited: 8 USED (low confidence) K. Cai, L. Yang, J. Shi, and Q. Qin, “Critical conditions for escape of a high-speed fullerene from a BNC nanobeam after collision,” Scientific Reports. 2018. link Times cited: 9 USED (low confidence) K. Zhang, F. Wang, and Y. Lu, “Molecular dynamics simulation of continuous nanoflow transport through the uneven wettability channel,” AIP Advances. 2018. link Times cited: 10 Abstract: It is necessary to understand and predict the behavior of co… read moreAbstract: It is necessary to understand and predict the behavior of continuous nanoflow, especially inside the nanochannel with uneven wettability. Because the properties of fluid confined in the nanochannel are different from the macroscopic fluid, molecular level understanding is critical for future applications. In this work, a series of molecular dynamics simulations were executed to investigate the effect of the wettability gradient on the continuous nanofluid. In the simulations, different osmotic pressures were applied to make the water transport through different nanochannels. Simulation data was analyzed to obtain water flow rate, shear viscosity, capillary force, density distributions along the height directions of channel and apparent friction factor. Results show that the uneven wettability has a significant effect on the transportation of confined water only under the proper applied osmotic pressure and the height of channel. Under the appropriate conditions, the uneven wettability has a promotion on t... read less USED (low confidence) V. Scheffer, R. Thevamaran, and V. Coluci, “Compressive response and deformation mechanisms of vertically aligned helical carbon nanotube forests,” Applied Physics Letters. 2018. link Times cited: 3 Abstract: We study the dynamic compressive response of vertically alig… read moreAbstract: We study the dynamic compressive response of vertically aligned helical carbon nanotube forests using a mesoscale model. To describe the compressive response, the model includes the helical geometry of the constituent coils, the entanglement between neighboring coils, and the sideway interactions among coils. Coarse-grained simulations show forest densification and stress localization, which are caused by different deformation mechanisms such as coil packing, buckling, and crushing. We find that these mechanisms depend on the initial overlap between coils and lead to a nonlinear stress-strain behavior that agrees with recent impact experiments. The nonlinear stress-strain behavior was shown to be composed of an initial linear increase of stress in strain followed by an exponential growth. These regimes are an outcome of the characteristics of both the individual coils and the entangled morphology of the forests. read less USED (low confidence) J. Li, B. Ni, T. Zhang, and H. Gao, “Phase field crystal modeling of grain boundary structures and growth in polycrystalline graphene,” Journal of the Mechanics and Physics of Solids. 2017. link Times cited: 26 USED (low confidence) M. Dewapriya and S. Meguid, “Atomistic simulations of nanoscale crack-vacancy interaction in graphene,” Carbon. 2017. link Times cited: 24 USED (low confidence) J. Liu et al., “Lateral force modulation by moiré superlattice structure: Surfing on periodically undulated graphene sheets,” Carbon. 2017. link Times cited: 14 USED (low confidence) F. Meng, C. Chen, D. Hu, and J. Song, “Deformation behaviors of three-dimensional graphene honeycombs under out-of-plane compression: Atomistic simulations and predictive modeling,” Journal of The Mechanics and Physics of Solids. 2017. link Times cited: 31 USED (low confidence) S. Hosseini-Hashemi, A. Sepahi-Boroujeni, and S. Sepahi-Boroujeni, “Analytical and molecular dynamics studies on the impact loading of single-layered graphene sheet by fullerene,” Applied Surface Science. 2017. link Times cited: 22 USED (low confidence) M. Shavikloo and S. Kimiagar, “Thermal rectification in partially hydrogenated graphene with grain boundary, a non-equilibrium molecular dynamics study,” Computational Materials Science. 2017. link Times cited: 20 USED (low confidence) Y. Rosandi and H. Urbassek, “Glancing ion incidence on a graphite-supported graphene flake: Lift-off vs welding,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2017. link Times cited: 1 USED (low confidence) H. Dian-Rong, Z. Lei, D. Ya-Fei, and L. Cheng-lin, “Torsional behavior of chiral single-walled and double-walled carbon nanotubes,” Materials Research Express. 2017. link Times cited: 2 Abstract: The torsional behavior of the chiral single-walled carbon na… read moreAbstract: The torsional behavior of the chiral single-walled carbon nanotubes (SWCNTs) and double-walled carbon nanotubes (DWCNTs) is investigated using molecular dynamics (MD) method. The results show that the torsional behavior of chiral DWCNTs presents a weaker direction dependent than that of SWCNTs. The critical buckling shear strain of DWCNT in the untwisting direction of the outer tube is always greater than that in the opposite direction. The torsional rigidities of the DWCNT and its outer tubes are approximately identical. However, torsional elastic range of the DWCNT is much higher than that of the outer tube. Moreover, the torsional direction dependency of incommensurate chiral (n1 + m1, −m1)@ (n2,m2) tube is weaker than that of commensurate (n1,m1)@ (n2,m2) tube, which implies that if the chiral angles of the inner and the outer tube of a DWCNT are arranged in opposite directions, the torsional direction dependency of a DWCNT will be further reduced. Meanwhile, rotational inertia of the DWCNT remains nearly unchanged under torsion in a quite large torsional range. These conclusions will be helpful in designing torsional components of NEMS (nano-electromechanical system) using carbon tubes. read less USED (low confidence) A. Wei, Y. Li, Y. Li, and H. Ye, “Thermal characteristics of graphene nanosheet with graphane domains of varying morphologies,” Computational Materials Science. 2017. link Times cited: 15 USED (low confidence) S. Debroy, V. P. K. Miriyala, K. V. Sekhar, S. G. Acharyya, and A. Acharyya, “Synergistic effect of temperature and point defect on the mechanical properties of single layer and bi-layer graphene,” Superlattices and Microstructures. 2017. link Times cited: 7 USED (low confidence) M. Li, Y. Niu, H. Wu, X. Zhang, Y. Luo, and Z. Kang, “Wrinkling and wrinkling-suppression in graphene membranes with frozen zone,” Thin Solid Films. 2017. link Times cited: 11 USED (low confidence) F. Mehralian, Y. Beni, and M. K. Zeverdejani, “Calibration of nonlocal strain gradient shell model for buckling analysis of nanotubes using molecular dynamics simulations,” Physica B-condensed Matter. 2017. link Times cited: 64 USED (low confidence) R. Ansari and S. Rouhi, “Vibrational analysis of single-layered silicon carbide nanosheets and single-walled silicon carbide nanotubes using nanoscale finite element method,” Proceedings of the Institution of Mechanical Engineers, Part C: Journal of Mechanical Engineering Science. 2017. link Times cited: 10 Abstract: A three-dimensional finite element model has been used here … read moreAbstract: A three-dimensional finite element model has been used here to study the vibrational behavior of silicon carbide nanosheets and nanotubes. The bonds of hexagonal lattices of SiC nanosheets have been modeled by structural beam elements, and at the corners, mass elements are placed instead of Si and C atoms. Moreover, molecular dynamics simulations are performed to verify the finite element model. Comparing the results of finite element model and molecular dynamics simulations, it is concluded that the utilized approach can predict the results of molecular dynamics simulations with a reasonable accuracy. It is observed that the atomic structure does not significantly affect the vibrational behavior of nanosheets. Besides, increasing the size of nanosheet results in decreasing the effect of geometry variation. As the aspect ratio of nanotubes increases, the effects of boundary conditions and length diminish so that the frequency envelopes tend to converge. read less USED (low confidence) A. Kavalur and W. K. Kim, “Molecular dynamics study on friction of polycrystalline graphene,” Computational Materials Science. 2017. link Times cited: 11 USED (low confidence) A. Narjabadifam, F. Vakili-Tahami, and M. Zehsaz, “Modal analysis of multi-walled carbon nanocones using molecular dynamics simulation,” Computational Materials Science. 2017. link Times cited: 9 USED (low confidence) J. Hua, Q. Liu, Y. Hou, X. Wu, and Y. Zhang, “Growth speed of single edge pre-crack in graphene sheet under tension,” Engineering Fracture Mechanics. 2017. link Times cited: 5 USED (low confidence) C. Zhang, H.-Z. Song, F. Mao, C. Wang, D.-Q. Wang, and F.-S. Zhang, “Molecular dynamics simulation of irradiation damage of SiC/Gra/SiC composites,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2017. link Times cited: 4 USED (low confidence) C. Diao, Y. Dong, and J. Lin, “Reactive force field simulation on thermal conductivities of carbon nanotubes and graphene,” International Journal of Heat and Mass Transfer. 2017. link Times cited: 35 USED (low confidence) S. Sahmani and A. Fattahi, “Calibration of developed nonlocal anisotropic shear deformable plate model for uniaxial instability of 3D metallic carbon nanosheets using MD simulations,” Computer Methods in Applied Mechanics and Engineering. 2017. link Times cited: 42 USED (low confidence) M. Jamaati and A. Mehri, “Role of Interatomic Potentials in Simulation of Thermal Transport in Carbon Nanotubes,” International Journal of Engineering, Transactions B: Applications. 2017. link Times cited: 3 Abstract: Interatomic potentials, which describe interactions between … read moreAbstract: Interatomic potentials, which describe interactions between elements of nanosystems, are crucial in theoretical study of their physical properties. We focus on two well known empirical potentials, i.e. Tersoff's and Brenner's potentials, and compare their performance in calculation of thermal transport in carbon nanotubes. In this way, we study the temperature and diameter dependence of thermal conductivity of single walled armchair carbon nanotube by using the mentioned interatomic potentials. We take advantage of direct non-equilibrium molecular dynamics simulation, which well resembles the experimental set up for thermal conductivity measurement. The results show that increasing the temperature increases the conductivity in contrast with diameter growth which decreases the thermal conductivity. It is important to note that both interatomic potentials describe the system behavior very well, however they lead to different conductivity values. It is found that the difference between the performance of studied potentials can be seen more obviously in longer tubes. We also observe a peak in thermal conductivity by increasing system temperature. System is deformed at T≈1000 K, when Tersoff's potential is employed for description of interactions. While its instability occurs at higher temperature (T≈1600 K), when we try to simulate system by Brenner's potential. read less USED (low confidence) Y.-C. Wang, Y. Zhu, F. Wang, X. Liu, and H. Wu, “Super-elasticity and deformation mechanism of three-dimensional pillared graphene network structures,” Carbon. 2017. link Times cited: 32 USED (low confidence) J. Moon, S. Yang, and M. Cho, “Interfacial strengthening between graphene and polymer through Stone-Thrower-Wales defects: Ab initio and molecular dynamics simulations,” Carbon. 2017. link Times cited: 64 USED (low confidence) R. Nazemnezhad, M. Zare, and S. Hosseini-Hashemi, “Sandwich plate model of multilayer graphene sheets for considering interlayer shear effect in vibration analysis via molecular dynamics simulations,” Applied Mathematical Modelling. 2017. link Times cited: 13 USED (low confidence) Y. T. Beni, F. Mehralian, and M. K. Zeverdejani, “Size-dependent buckling analysis of different chirality SWCNT under combined axial and radial loading based on orthotropic model,” Materials Research Express. 2017. link Times cited: 8 Abstract: In the present study, the size-dependent buckling behavior o… read moreAbstract: In the present study, the size-dependent buckling behavior of carbon nanotubes (CNTs) is investigated on the basis of orthotropic shell model. Due to the nature of carbon nanotubes, their properties differ in various directions; therefore, they must be treated as anisotropic shells. Moreover, due to the small dimensions of CNTs, material length scale parameter must be included to predict the mechanical behavior of CNTs more accurately; accordingly this study is carried out on the basis of the new modified couple stress theory. CNT buckling affects the stability of nanocomposites and nanoactuators and small dimensions and different properties affect the CNT stability. In this article, using minimum potential energy principle, the equilibrium equations and boundary conditions are derived. Then, the buckling response of simply supported CNTs under combined loading is studied and the critical buckling load of the orthotropic CNT is calculated for various structural and geometrical conditions. Finally, the molecular dynamics (MD) simulation is performed to investigate the axial buckling behaviour of defective CNTs. read less USED (low confidence) G. Giannopoulos and G. S. Avntoulla, “Tensile strength of graphene versus temperature and crack size: Analytical expressions from molecular dynamics simulation data,” Proceedings of the Institution of Mechanical Engineers, Part N: Journal of Nanomaterials, Nanoengineering and Nanosystems. 2017. link Times cited: 4 Abstract: Graphene, the strongest known material, is significantly inf… read moreAbstract: Graphene, the strongest known material, is significantly influenced by the loading conditions, the environmental temperature and the existence of internal imperfections and discontinuities such as cracks. Higher temperatures lead to higher atomic kinetic energies and easier failure of graphene while even a one atom vacancy may cause a dramatic reduction in its strength. The aim of the present study is to describe analytical expressions which associate the tensile strength of the monolayer graphene with the temperature and the length of a possible centrally positioned, straight crack. For this reason, molecular dynamics simulations are conducted to compute all the necessary numerical data. Then special equations are developed by fitting the computed data into appropriate non-linear regression surfaces. The proposed non-linear analytical equations are capable of straightforwardly predicting the strength of graphene given the chirality, the temperature and the size of the center crack under investigation. read less USED (low confidence) S. Sahmani and A. Fattahi, “An anisotropic calibrated nonlocal plate model for biaxial instability analysis of 3D metallic carbon nanosheets using molecular dynamics simulations,” Materials Research Express. 2017. link Times cited: 36 Abstract: Based upon an interlocking hexagonal arrangement of carbon a… read moreAbstract: Based upon an interlocking hexagonal arrangement of carbon atoms, it is possible to have a mechanically stable three-dimensional (3D) carbon structure including metallicity which provides a wide range of applications. In the present study, a novel calibrated size-dependent plate model using nonlocal continuum theory of elasticity with an exponential distribution of the shear deformation is constructed to anticipate accurately the nonlinear instability response of biaxially loaded 3D metallic carbon nanosheets. Explicit expressions for the size-dependent equilibrium curves are proposed via a two-stepped perturbation technique. After that, the critical biaxial buckling loads obtained by the developed nonlocal plate model are matched with those evaluated by some molecular dynamics (MD) simulations of biaxial instability of square 3D metallic carbon nanosheets to catch the proper value of nonlocal parameter. It is indicated that by using the proposed calibrated nonlocal plate model, the error in prediction of the biaxial instability behavior of 3D metallic carbon nanosheets reduces significantly. read less USED (low confidence) F. Mehralian, Y. Beni, and M. K. Zeverdejani, “Nonlocal strain gradient theory calibration using molecular dynamics simulation based on small scale vibration of nanotubes,” Physica B-condensed Matter. 2017. link Times cited: 116 USED (low confidence) K. Cai, L. Liu, J. Shi, and Q. Qin, “Winding a nanotube from black phosphorus nanoribbon onto a CNT at low temperature: A molecular dynamics study,” Materials & Design. 2017. link Times cited: 28 USED (low confidence) I. Salehinia, I. Mastorakos, and H. Zbib, “Effects of Defects on Hydrogen Diffusion in NbC,” Applied Surface Science. 2017. link Times cited: 6 USED (low confidence) J. Zhan, X. Yao, W. H. Li, and X. Zhang, “Tensile mechanical properties study of SiC/graphene composites based on molecular dynamics,” Computational Materials Science. 2017. link Times cited: 18 USED (low confidence) G. Rajasekaran and A. Parashar, “Enhancement of fracture toughness of graphene via crack bridging with stone-thrower-wales defects,” Diamond and Related Materials. 2017. link Times cited: 30 USED (low confidence) M. Nishimura, N. Takahashi, and Y. Takagi, “Relationship between local buckling and atomic elastic stiffness in multi-walled carbon nanotubes under compression and bending deformations,” Computational Materials Science. 2017. link Times cited: 10 USED (low confidence) K. Duan, L. Li, Y. Hu, and X. Wang, “Enhanced interfacial strength of carbon nanotube/copper nanocomposites via Ni-coating: Molecular-dynamics insights,” Physica E-low-dimensional Systems & Nanostructures. 2017. link Times cited: 31 USED (low confidence) E. Shahini, K. K. Taheri, and A. Taheri, “An investigation on tensile properties of coiled carbon nanotubes using molecular dynamics simulation,” Diamond and Related Materials. 2017. link Times cited: 13 USED (low confidence) J. Huang and Q. Han, “A molecular dynamics study of stiffness-dependent thermal conductivity of graphene,” Materials Research Express. 2017. link Times cited: 0 Abstract: Non-equilibrium molecular dynamics (NEMD) simulations is use… read moreAbstract: Non-equilibrium molecular dynamics (NEMD) simulations is used to investigate the effect of support stiffness on thermal conductivity property based on the ‘graphene-springs’ model. It shows that the support stiffness greatly influences the thermal conductivity. Thermal conductivity of graphene decreases nonlinearly as the support stiffness increases. The temperature stability of thermal conductivity property of graphene can be improved by the support stiffness. For patterned stiffness supported stripe, thermal conductivity is significantly dependent on the patterned area, angle and stripe distribution. The work in this paper reveals the possibility for designing and controlling of thermal conduction of graphene by using support stiffness, which is beneficial to the application of graphene in nanoscale devices. read less USED (low confidence) T. Min, T. Yoon, and T. Lim, “Molecular dynamics simulation of melting of silicene,” Materials Research Express. 2017. link Times cited: 8 Abstract: We report the melting temperature of free-standing silicene … read moreAbstract: We report the melting temperature of free-standing silicene by carrying out molecular dynamics (MD) simulation experiments using optimized Stillinger-Weber (SW) potential by Zhang et al (2014 Phys. Rev. B 89 054310). The melting scenario of a free-standing silicene is well captured visually in our MD simulations. The data are systematically analyzed using a few qualitatively different indicators, including caloric curve, radial distribution function and a numerical indicator known as global similarity index. The optimized SW potential consistently yields a melting temperature of 1500 K for the simulated free-standing, infinite silicene. read less USED (low confidence) W. Zhang, T. Ragab, and C. Basaran, “Unraveling mechanics of armchair and zigzag graphene nanoribbons,” International Journal of Damage Mechanics. 2017. link Times cited: 21 Abstract: The unraveling process of armchair and zigzag graphene nanor… read moreAbstract: The unraveling process of armchair and zigzag graphene nanoribbons (GNRs) was studied with molecular dynamics simulations using the Adaptive Intermolecular Reactive Empirical Bond Order Potential for carbon–carbon bond. Simulations were performed at 300°K, with GNR length and width varying from 2.5 nm to 15 nm in 2.5 nm increments. In these simulations, the unraveling of the GNRs was started from two positions; the corner or the middle of the top side. Force–displacement relationship was analyzed for the terminal atom of the unraveling chains. For armchair GNRs (AGNRs) that were unraveled from the corner, the force required for the onset of the unraveling is in the range of 4.279–5.045 eV/Å, and the observed failure force in the carbon chain is in the range of 5.553–5.963 eV/Å. Unraveling will not happen when AGNRs are unraveled from the middle, and zigzag GNRs (ZGNRs) are unraveled either from corner or middle. For the latter cases, the bond between the terminal atom and GNR sheet breaks under the stretching force, and only one carbon atom can be pulled out from the GNR sheet. The size effect of width and length on the unraveling process was also studied. Simulations show that size has a trivial effect on unraveling. Comparison between unraveling of AGNRs and ZGNRs indicates that AGNRs are perfect structure to produce Monatomic Carbon Chains, while ZGNRs are more stable and are good candidate for graphene nanodevices that are free from unraveling disintegration. read less USED (low confidence) J. Han, D. Sohn, W. Woo, and D.-K. Kim, “Molecular dynamics study of fracture toughness and trans-intergranular transition in bi-crystalline graphene,” Computational Materials Science. 2017. link Times cited: 24 USED (low confidence) S. Ajori, R. Ansari, and S. Haghighi, “Vibration characteristics of three-dimensional metallic carbon nanostructures with interlocking hexagons pattern (T6 and T14): A molecular dynamics study,” Computational Materials Science. 2017. link Times cited: 7 USED (low confidence) H. Badjian and A. Setoodeh, “Improved tensile and buckling behavior of defected carbon nanotubes utilizing boron nitride coating - A molecular dynamic study,” Physica B-condensed Matter. 2017. link Times cited: 22 USED (low confidence) L. Bai, N. Srikanth, E. Korznikova, J. Baimova, S. Dmitriev, and K. Zhou, “Wear and friction between smooth or rough diamond-like carbon films and diamond tips,” Wear. 2017. link Times cited: 76 USED (low confidence) G. Lei, H. Cheng, H. Liu, and W. Rao, “Thermal rectification in asymmetric graphyne nanoribbons: A nonequilibrium molecular dynamics study,” Materials Letters. 2017. link Times cited: 12 USED (low confidence) F. Mehralian, Y. T. Beni, and Y. Kiani, “Molecular dynamics study on the thermal buckling of carbon nanotubes in the presence of pre-load,” Materials Research Express. 2017. link Times cited: 13 Abstract: This paper presents a molecular dynamics (MD) study on the t… read moreAbstract: This paper presents a molecular dynamics (MD) study on the thermally induced buckling of pre-compressed carbon nanotubes (CNTs) using AIREBO interatomic potential. CNTs are compressed at a certain ratio of their critical buckling strain and then undergo a uniform temperature rise. In order to evaluate the chirality effects, armchair and zigzag CNTs are investigated. The results demonstrate that critical buckling temperature depends strongly on the geometrical parameters such as chirality, diameter and aspect ratio. The armchair CNTs, due to their bond configuration, show higher resistance to thermal buckling than zigzag ones. Moreover, the buckling mechanism is strongly affected by the length of CNTs. At small aspect ratios, radial limit load shell buckling occurs while by increase in aspect ratio above the critical one different behaviors emerge. Due to the strong thermal oscillation of carbon atoms, increase in temperature changes perfect nanotubes to defective ones. read less USED (low confidence) M. Liao, “Influences of vacancy defects on tensile failure of open-tip carbon nanocones.” 2017. link Times cited: 3 Abstract: This paper studied influences of vacancy defects on tensile … read moreAbstract: This paper studied influences of vacancy defects on tensile failure of open-tip carbon nanocones (CNCs) by molecular dynamics simulations. Carbon nanocones, perfect and containing mono-vacancy defects (including CNCs with the upper-vacancy, the middle-vacancy, and the lower-vacancy), were simulated in order to understand the influence of the presence and location of the vacancy defects on the CNCs tensile behavior. Some findings were obtained. It was found that the upper-vacancy CNC has the greatest degradation in the failure strain and the failure load among the three vacancy-defect CNCs, and the lower-vacancy CNC has the smallest degradation in the failure strain and the failure load. Degradation in the failure load is larger than degradation in the failure strain. Moreover, no apparent yielding (large elongation) was observed before failure of the studied CNCs. All the vacancy-defect CNCs were broken near the top end rather than near the vacancy location of the CNCs. The behaviors of the vacancy-location-dependent degradation and the vacancy-location-independent failure (namely, the near top-end failure) of the vacancy-defect CNCs are quite different from those of vacancy-defect CNTs (carbon nanotubes). These particular behaviors are ascribed to non-uniform diameters along the cone axes of the CNCs. read less USED (low confidence) Y. Xiang and H. S. Shen, “Compressive Buckling of Rippled Graphene via Molecular Dynamics Simulations,” International Journal of Structural Stability and Dynamics. 2016. link Times cited: 7 Abstract: This paper studies the compressive buckling of near-square r… read moreAbstract: This paper studies the compressive buckling of near-square rippled monolayer graphene sheets in thermal environments by using molecular dynamics simulations. Armchair and zigzag graphene sheets are both considered and the four edges of a graphene sheet are either simply supported or clamped. Compressive force instead of the commonly used compressive strain is gradually applied to the edges of the graphene sheet until the graphene sheet is crushed. It is found that ripples in the graphene are formed owing to thermal fluctuations even before the compressive force is applied. The amplitude of ripples is reduced when the compressive force is applied to the graphene. The buckling mode of the graphene may show local or global mode shape features, depending on the chirality, the support conditions and the size of the graphene. Most buckling modes of the graphene sheets are very different from the global (1,1) mode of a uniaxially loaded and simply supported or clamped square plate as predicted by continuum mechanics models. A clamped graphene can take significantly more compressive force after the occurrence of initial buckling and before the graphene is completely crushed. A zigzag graphene has a larger initial buckling force than its armchair counterpart. Raising the environmental temperature may either increase or decrease the initial buckling force of the graphene depending on the support conditions and the chirality of the graphene. read less USED (low confidence) M. Sato, Y. Yachi, I. Koike, H. Shima, and Y. Umeno, “Cross-Sectional Deformation in Multi-Walled Carbon Nanotubes under Hydrostatic Pressure,” Solid State Phenomena. 2016. link Times cited: 1 Abstract: This contribution provides simulated results of cross-sectio… read moreAbstract: This contribution provides simulated results of cross-sectional deformations observed in carbon nanotubes under high pressure. Molecular dynamics (MD) simulations were performed to explore radial buckling characteristics of multi-walled carbon nanotubes, and confirmed a variety of large-amplitude deformation modes. The energetically stable deformation mode turned out to be strongly dependent on the diameter of the innermost tube and the number of concentric walls. Critical buckling pressure obtained by MD simulations was compared with that estimated from a continuum elastic approximation, by which the validity of the continuum approximation was assessed. read less USED (low confidence) W. Chen, J. Zhang, and Y. Yue, “Molecular dynamics study on thermal transport at carbon nanotube interface junctions: Effects of mechanical force and chemical functionalization,” International Journal of Heat and Mass Transfer. 2016. link Times cited: 24 USED (low confidence) S. Rouhi and A. Ghasemi, “Investigation of the Elastic Properties of Graphenylene Using Molecular Dynamics Simulations,” Materials Research-ibero-american Journal of Materials. 2016. link Times cited: 24 Abstract: Molecular dynamics simulations are used here to study the me… read moreAbstract: Molecular dynamics simulations are used here to study the mechanical behavior of graphenylene under uni-directional and bi-directional loadings. The effects of nanosheet chirality and size on Young's modulus of graphenylene are investigated. Compared to graphene, graphenylene possess a smaller elastic modulus. It is shown that for large armchair and zigzag graphenylenes, the effect of nanosheet size on the mechanical properties can be neglected. It is observed that increasing temperature results in decreasing Young's modulus of graphenylene. Besides, fracture of graphenylene occurs at large strains. Moreover, it is represented that for small graphenylenes, bulk modulus is significantly sensitive to the size variation. However, this sensitivity disappears for large nanosheets. read less USED (low confidence) N. A. Mehta, D. Levin, V. J. Murray, and T. Minton, “Study of non-reactive scattering from graphene using molecular beam experiments and molecular dynamics.” 2016. link Times cited: 8 Abstract: Conventional gas surface interaction (GSI) models and molecu… read moreAbstract: Conventional gas surface interaction (GSI) models and molecular dynamics (MD) are used to generate the gas scattering angle and post-collision kinetic energy distribution, which is compared with the experimental values obtained from molecular beam scattering experiments. While conventional GSI models were unable to capture the experimental scattering distributions, MD simulations were able to generate reasonable agreement. MD simulations also allowed the trajectories to be classified into single, multiple collisions with escape, and multiple collisions without escape events. read less USED (low confidence) Z. Yang, D. Wang, Z.-X. Lu, and W. Hu, “Atomistic simulation on the plastic deformation and fracture of bio-inspired graphene/Ni nanocomposites,” Applied Physics Letters. 2016. link Times cited: 37 Abstract: Molecular dynamics simulations were performed to investigate… read moreAbstract: Molecular dynamics simulations were performed to investigate the plastic deformation and fracture behaviors of bio-inspired graphene/metal nanocomposites, which have a “brick-and-mortar” nanostructure, consisting of hard graphene single-layers embedded in a soft Ni matrix. The plastic deformation mechanisms of the nanocomposites were analyzed as well as their effects on the mechanical properties with various geometrical variations. It was found that the strength and ductility of the metal matrix can be highly enhanced with the addition of the staggered graphene layers, and the plastic deformation can be attributed to the interfacial sliding, dislocation nucleation, and cracks' combination. The strength of the nanocomposites strongly depends on the length scale of the nanostructure and the interlayer distance as well. In addition, slip at the interface releases the stress in graphene layers, leading to the stress distribution on the graphene more uniform. The present results are expected to contribute to the design of the nanolayered graphene/metal composites with high performance. read less USED (low confidence) K. Zhang, F. Wang, and X. Zhao, “The self-propelled movement of the water nanodroplet in different surface wettability gradients: A contact angle view,” Computational Materials Science. 2016. link Times cited: 26 USED (low confidence) G. Galiullina, N. Orekhov, and V. Stegailov, “Nucleation of carbon nanostructures: Molecular dynamics with reactive potentials,” Journal of Physics: Conference Series. 2016. link Times cited: 12 Abstract: In this paper, we present our first results in the study of … read moreAbstract: In this paper, we present our first results in the study of the details of nucleation in the homogeneous carbon gas phase using computer calculations with molecular dynamics methods. Direct and controlled molecular-dynamics approaches are used and two reactive potentials (ReaxFF and AIREBO) are compared. The calculations have shown that the nucleation process in the AIREBO model is going more actively than in the ReaxFF one. read less USED (low confidence) H. Qin, Y. Sun, J. Liu, and Y. Liu, “Mechanical properties of wrinkled graphene generated by topological defects,” Carbon. 2016. link Times cited: 70 USED (low confidence) N. Boddeti, R. Long, and M. Dunn, “Adhesion mechanics of graphene on textured substrates,” International Journal of Solids and Structures. 2016. link Times cited: 9 USED (low confidence) Q. Zhu, L. Zou, G. Zhou, W. Saidi, and J. C. Yang, “Early and transient stages of Cu oxidation: Atomistic insights from theoretical simulations and in situ experiments,” Surface Science. 2016. link Times cited: 33 USED (low confidence) X. Liu, F. Wang, W. Wang, and H. Wu, “Interfacial strengthening and self-healing effect in graphene-copper nanolayered composites under shear deformation,” Carbon. 2016. link Times cited: 76 USED (low confidence) J. Han, S. Ryu, and D. Sohn, “A feasibility study on the fracture strength measurement of polycrystalline graphene using nanoindentation with a cylindrical indenter,” Carbon. 2016. link Times cited: 15 USED (low confidence) R. Nazemnezhad, M. Zare, S. Hosseini-Hashemi, and H. Shokrollahi, “Molecular dynamics simulation for interlayer interactions of graphene nanoribbons with multiple layers,” Superlattices and Microstructures. 2016. link Times cited: 13 USED (low confidence) M. Ho, C.-P. Huang, J. Tsai, C. Chou, and W.-J. Lee, “Probing C84-embedded Si Substrate Using Scanning Probe Microscopy and Molecular Dynamics.,” Journal of visualized experiments : JoVE. 2016. link Times cited: 1 Abstract: This paper reports an array-designed C84-embedded Si substra… read moreAbstract: This paper reports an array-designed C84-embedded Si substrate fabricated using a controlled self-assembly method in an ultra-high vacuum chamber. The characteristics of the C84-embedded Si surface, such as atomic resolution topography, local electronic density of states, band gap energy, field emission properties, nanomechanical stiffness, and surface magnetism, were examined using a variety of surface analysis techniques under ultra, high vacuum (UHV) conditions as well as in an atmospheric system. Experimental results demonstrate the high uniformity of the C84-embedded Si surface fabricated using a controlled self-assembly nanotechnology mechanism, represents an important development in the application of field emission display (FED), optoelectronic device fabrication, MEMS cutting tools, and in efforts to find a suitable replacement for carbide semiconductors. Molecular dynamics (MD) method with semi-empirical potential can be used to study the nanoindentation of C84-embedded Si substrate. A detailed description for performing MD simulation is presented here. Details for a comprehensive study on mechanical analysis of MD simulation such as indentation force, Young's modulus, surface stiffness, atomic stress, and atomic strain are included. The atomic stress and von-Mises strain distributions of the indentation model can be calculated to monitor deformation mechanism with time evaluation in atomistic level. read less USED (low confidence) G. Rajasekaran and A. Parashar, “Anisotropic compressive response of Stone–Thrower–Wales defects in graphene: A molecular dynamics study,” Materials Research Express. 2016. link Times cited: 12 Abstract: The mechanical properties of graphene sheet can be tailored … read moreAbstract: The mechanical properties of graphene sheet can be tailored with the help of topological defects. In this research article, the effects of Stone–Thrower–Wales (STW) defects on the mechanical properties of graphene sheet was investigated with the help of molecular dynamics based simulations. Authors has made an attempt to analyse the stress field developed in and around the vicinity of defect due to bond reorientation and further systematic evaluation has been carried out to study the effect of these stress fields against the applied axial compressive load. The results obtained with the pristine graphene were made to compare with the available open literature and the results were reported to be in good agreement with theoretical and experimental data. It was predicted that graphene with STW defect cannot able to bear compressive strength in zigzag direction, whereas on the other hand it was predicted that graphene sheet containing STW defect can bear higher compressive load in armchair direction, which shows an anisotropic response of STW defects in graphene. From the obtained results it can be observed that orientation of STW defects and the loading direction plays an important role to alter the strength of graphene under axial compression. read less USED (low confidence) D. Han, C.-L. Luo, Y. Dai, and X. Zhu, “A possible formation mechanism of double-walled and multi-walled carbon nanotube: a molecular dynamics study,” Materials Research Express. 2016. link Times cited: 2 Abstract: Molecular dynamics simulations based on an empirical potenti… read moreAbstract: Molecular dynamics simulations based on an empirical potential were performed to study the interaction of graphene nanoribbons and the single-walled carbon nanotubes. The results indicated that a piece of graphene nanoribbon can form a tube structure inside or outside single-walled carbon nanotubes spontaneously under certain condition. Based on this kind of spontaneous phenomenon, we proposed a new possible formation mechanism of double walled carbon nanotube and multi-walled carbon nanotube, and suggested the possibility of controlling the structure of double-walled carbon nanotube and/or multi-walled carbon nanotube. read less USED (low confidence) S. Sadeghzadeh, “Nanoparticle mass detection by single and multilayer graphene sheets: Theory and simulations,” Applied Mathematical Modelling. 2016. link Times cited: 29 USED (low confidence) R. Ansari, S. Ajori, and R. Hassani, “A molecular dynamics investigation into the size-dependent buckling behavior of a novel three-dimensional metallic carbon nanostructure (T6),” Superlattices and Microstructures. 2016. link Times cited: 5 USED (low confidence) M. Lodge et al., “Lubricity of gold nanocrystals on graphene measured using quartz crystal microbalance,” Scientific Reports. 2016. link Times cited: 17 USED (low confidence) K. Cai, J. Wan, J.-zhou Yu, H. Cai, and Q. Qin, “Molecular dynamics study on welding a defected graphene by a moving fullerene,” Applied Surface Science. 2016. link Times cited: 16 USED (low confidence) A. Khoei and M. Khorrami, “Mechanical properties of graphene oxide: A molecular dynamics study,” Fullerenes, Nanotubes and Carbon Nanostructures. 2016. link Times cited: 43 Abstract: ABSTRACT In this paper, the mechanical properties of graphen… read moreAbstract: ABSTRACT In this paper, the mechanical properties of graphene oxide are obtained using the molecular dynamics analysis, including the ultimate stress, Young modulus, shear modulus and elastic constants, and the results are compared with those of pristine graphene. It is observed that the increase of oxide agents (–O) and (–OH) leads to the increase of C–C bond length at each hexagonal lattice and as a result, alter the mechanical properties of the graphene sheet. It is shown that the elasticity modulus and ultimate tensile strength of graphene oxides (–O) and (–OH) decrease significantly causing the failure behavior of graphene sheet changes from the brittle to ductile. The results of shear loading tests illustrate that the increase of oxide agents (–O/–OH) results in the decrease of ultimate shear stress and shear module of the graphene sheet. It is shown that the increase of oxide agents in the graphene sheet leads to decrease of the elastic constants, in which the reduction of elastic properties in the armchair direction is more significant than the zigzag direction. Moreover, the graphene sheet with oxide agents (–O) and (–O/–OH) presents an anisotropic behavior. read less USED (low confidence) H. Li, X. Tang, F. Chen, H. Huang, J. Liu, and D. Chen, “Molecular dynamics study of radiation damage and microstructure evolution of zigzag single-walled carbon nanotubes under carbon ion incidence,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2016. link Times cited: 5 USED (low confidence) J. Shi, Z. Wang, and Z. Chen, “Concurrence of oscillatory and rotation of the rotors in a thermal nanotube motor,” Computational Materials Science. 2016. link Times cited: 6 USED (low confidence) T. Zhou, J. Lou, Y.-geng Zhang, H. Song, and F. Huang, “Hot spot formation and chemical reaction initiation in shocked HMX crystals with nanovoids: a large-scale reactive molecular dynamics study.,” Physical chemistry chemical physics : PCCP. 2016. link Times cited: 46 Abstract: We report million-atom reactive molecular dynamic simulation… read moreAbstract: We report million-atom reactive molecular dynamic simulations of shock initiation of β-cyclotetramethylene tetranitramine (β-HMX) single crystals containing nanometer-scale spherical voids. Shock induced void collapse and subsequent hot spot formation as well as chemical reaction initiation are observed which depend on the void size and impact strength. For an impact velocity of 1 km s(-1) and a void radius of 4 nm, the void collapse process includes three stages; the dominant mechanism is the convergence of upstream molecules toward the centerline and the downstream surface of the void forming flowing molecules. Hot spot formation also undergoes three stages, and the principal mechanism is kinetic energy transforming to thermal energy due to the collision of flowing molecules on the downstream surface. The high temperature of the hot spot initiates a local chemical reaction, and the breakage of the N-NO2 bond plays the key role in the initial reaction mechanism. The impact strength and void size have noticeable effects on the shock dynamical process, resulting in a variation of the predominant mechanisms leading to void collapse and hot spot formation. Larger voids or stronger shocks result in more intense hot spots and, thus, more violent chemical reactions, promoting more reaction channels and generating more reaction products in a shorter duration. The reaction products are mainly concentrated in the developed hot spot, indicating that the chemical reactivity of the hmx crystal is greatly enhanced by void collapse. The detailed information derived from this study can aid a thorough understanding of the role of void collapse in hot spot formation and the chemical reaction initiation of explosives. read less USED (low confidence) F. Pan, C. Li, X. Fu, F. Wang, Q. Sun, and Y. Jia, “Heat-pulse rectification in graphene Y junctions: A molecular dynamics simulations,” Physica E-low-dimensional Systems & Nanostructures. 2016. link Times cited: 3 USED (low confidence) B. Haque, S. Chowdhury, and J. Gillespie, “Molecular simulations of stress wave propagation and perforation of graphene sheets under transverse impact,” Carbon. 2016. link Times cited: 65 USED (low confidence) C. Baykasoğlu, Z. Ozturk, M. Kırca, A. T. Celebi, A. Mugan, and A. To, “Effects of lithium doping on hydrogen storage properties of heat welded random CNT network structures,” International Journal of Hydrogen Energy. 2016. link Times cited: 20 USED (low confidence) S. Thomas, K. Ajith, and M. C. Valsakumar, “Structural analysis of graphene and h-BN: A molecular dynamics approach.” 2016. link Times cited: 0 Abstract: Classical molecular dynamics simulation is employed to analy… read moreAbstract: Classical molecular dynamics simulation is employed to analyze pair correlations in graphene and h-BN at various temperatures to explore the integrity of their respective structures. As the temperature increases, the height fluctuations in the out-of-plane direction of both graphene and h-BN are found to increase. The positional spread of atoms also increases with temperature. Thus the amplitude of the peak positions in the radial distribution function (RDF) decreases with temperature. It is found that FWHM of peaks in the RDF of h-BN is smaller as compared to those of graphene which implies that the structure of h-BN is more robust as compared to that of graphene with respect to their respective empirical potential. read less USED (low confidence) Q. Luo and L. Tong, “Solutions for Clamped Adhesively Bonded Single Lap Joint With Movement of Support End and Its Application to a Carbon Nanotube Junction in Tension,” The Journal of Adhesion. 2016. link Times cited: 9 Abstract: This article presents analytical solutions for a clamped-cla… read moreAbstract: This article presents analytical solutions for a clamped-clamped adhesively bonded single lap joint with movement of supports and its application to studying the failure mechanism of carbon nanotube junctions in a tensile test. In the analytical model, the interface shear and normal stresses, movement of one support end, geometric nonlinearity, and the contact stresses between two cylinders are considered. Analytical solutions are derived for a clamped-clamped single lap joint with movement of one support end first, and then geometrically nonlinear finite element analysis is conducted to verify the present analytical solutions. An equivalent two-dimensional model is presented for a junction self-assembled by two carbon nanotubes, and the failure mechanism of the carbon nanotube junction is then studied by using the present analytical solutions. Structural performance of single lap joints with movement of support ends as boundary conditions is also investigated. read less USED (low confidence) B. K. Choi, G. Yoon, and S. Lee, “Molecular dynamics studies of CNT-reinforced aluminum composites under uniaxial tensile loading,” Composites Part B-engineering. 2016. link Times cited: 139 USED (low confidence) M. Degefe and A. Parashar, “Effect of non-bonded interactions on failure morphology of a defective graphene sheet,” Materials Research Express. 2016. link Times cited: 7 Abstract: Molecular dynamics based atomistic modeling was performed to… read moreAbstract: Molecular dynamics based atomistic modeling was performed to predict and quantify the effect of non-bonded interactions on the failure morphology of vacancy-affected sheets of graphene. A defective sheet of graphene containing vacancy defects was simulated in conjunction with the non-bonded interactions experienced due to the presence of a pristine sheet of graphene. In this study, the author revealed the mechanical properties and failure morphology of bilayer graphene sheets under the influence of single, double and multi-vacancy defects. It was concluded on the basis of atomistic simulations that non-bonded interactions as well as the stiffness of the pristine graphene sheet has significant impact on the failure morphology of the accompanied defective sheet of graphene. Non-bonded interactions in conjunction with defects can be further explored for modifying the brittle nature of graphene to ductile. read less USED (low confidence) B. Faria, N. Silvestre, and J. Lopes, “Mechanical behaviour of carbon nanotubes under combined twisting–bending,” Mechanics Research Communications. 2016. link Times cited: 14 USED (low confidence) T. Onodera and K. Shintani, “Mechanical Properties of Nanocarbon Hybrid Films via Indentation Simulation,” MRS Advances. 2016. link Times cited: 0 Abstract: The mechanical properties of nanocarbon hybrid films are add… read moreAbstract: The mechanical properties of nanocarbon hybrid films are addressed by means of indentation simulation based on molecular-dynamics. In these films, single-walled carbon nanotubes (SWCNTs) are intercalated parallel to each other between graphene sheets; the SWCNT axes are also parallel to the planes of the sheets. Thus the simulation model is quasi-two-dimensional. The load-deflection curve depends on both the number of the layers and the diameter of SWCNTs. In the range of small forces, the simulation data can be interpolated by a cubic function of the deflection, while in the range of large forces, the data can be expressed in terms of a linear function of the deflection. It is revealed that such a transition corresponds to the structural change of the hybrid film. read less USED (low confidence) M. Ozmaian, M. Ozmaian, A. Fathizadeh, M. Jalalvand, Ejtehadi, and S. Allaei, “Diffusion and self-assembly of C60 molecules on monolayer graphyne sheets,” Scientific Reports. 2016. link Times cited: 30 USED (low confidence) R. Ansari, S. Rouhi, and M. Aryayi, “On the vibration of double-walled carbon nanotubes using molecular structural and cylindrical shell models,” International Journal of Modern Physics B. 2016. link Times cited: 13 Abstract: The vibrational behavior of double-walled carbon nanotubes i… read moreAbstract: The vibrational behavior of double-walled carbon nanotubes is studied by the use of the molecular structural and cylindrical shell models. The spring elements are employed to model the van der Waals interaction. The effects of different parameters such as geometry, chirality, atomic structure and end constraint on the vibration of nanotubes are investigated. Besides, the results of two aforementioned approaches are compared. It is indicated that by increasing the nanotube side length and radius, the computationally efficient cylindrical shell model gives rational results. read less USED (low confidence) T. Trevethan and M. Heggie, “Molecular dynamics simulations of irradiation defects in graphite: Single crystal mechanical and thermal properties,” Computational Materials Science. 2016. link Times cited: 22 USED (low confidence) Y. Tang, J. Li, X. Wu, Q. Liu, Y. Liu, and P. Yang, “Tunable thermal property in edge hydrogenated AA-stacked bilayer graphene nanoribbons,” Applied Surface Science. 2016. link Times cited: 22 USED (low confidence) C. Chen, Z. Hu, Y. Li, L. Liu, H. Mori, and Z. Wang, “In-Situ High-Resolution Transmission Electron Microscopy Investigation of Overheating of Cu Nanoparticles,” Scientific Reports. 2016. link Times cited: 23 USED (low confidence) R. Ansari, S. Ajori, and S. Rouhi, “Characterization of the mechanical properties of polyphenylene polymer using molecular dynamics simulations,” Physica B-condensed Matter. 2016. link Times cited: 11 USED (low confidence) X. Zhou, S. Song, L. Li, and R.-jie Zhang, “Molecular dynamics simulation for mechanical properties of magnesium matrix composites reinforced with nickel-coated single-walled carbon nanotubes,” Journal of Composite Materials. 2016. link Times cited: 17 Abstract: As the interfacial structure and bonding strength play an im… read moreAbstract: As the interfacial structure and bonding strength play an important role in determining the mechanical performance of carbon nanotube reinforced metal matrix composite, investigating the interfacial mechanical properties of surface modified carbon nanotube reinforced metal matrix composite becomes one of the key factors for the improvement. The mechanical behaviors of nickel-coated single-walled carbon nanotube reinforced magnesium matrix composites were investigated using molecular dynamics simulation method. The results show that the Young's modulus of the nickel-coated single-walled carbon nanotube/Mg composite is obviously larger than that of the uncoated single-walled carbon nanotube/Mg composite. The results also show that the interfacial bonding of single-walled carbon nanotube/Mg composite can be drastically increased by addition of nickel coating to improve the wettability of the nanotube surface and Mg matrix. Furthermore, the influences of nickel coating number on the interfacial bonding characteristics of single-walled carbon nanotube/Mg composites also were studied. For three types of nickel coating number, i.e. without nickel coating, with one layer of nickel and two layers of nickel, the final pullout interfacial bonding strength of the nickel-coated single-walled carbon nanotube from Mg matrix about are 3.9 and 11.9 times larger, respectively, than that of the uncoated single-walled carbon nanotube. The simulation results have proved that such interfaces can effectively transfer load between the nanotube and magnesium matrix in the carbon nanotube/Mg composite, and this will provide the theoretical and experimental basis for the interface mechanics design of the carbon nanotube reinforced composites. read less USED (low confidence) C. Androulidakis, E. Koukaras, J. Parthenios, G. Kalosakas, K. Papagelis, and C. Galiotis, “Graphene flakes under controlled biaxial deformation,” Scientific Reports. 2015. link Times cited: 80 USED (low confidence) Z. Budrikis and S. Zapperi, “Temperature-Dependent Adhesion of Graphene Suspended on a Trench,” Nano Letters. 2015. link Times cited: 15 Abstract: Graphene deposited over a trench has been studied in the con… read moreAbstract: Graphene deposited over a trench has been studied in the context of nanomechanical resonators, where experiments indicate adhesion of the graphene sheet to the trench boundary and sidewalls leads to self-tensioning; however, this adhesion is not well understood. We use molecular dynamics to simulate graphene deposited on a trench and study how adhesion to the sidewalls depends on substrate interaction, temperature, and curvature of the edge of the trench. Over the range of parameters we study, the depth at the center of the sheet is approximately linear in substrate interaction strength and temperature but not trench width, and we explain this using a one-dimensional model for the sheet configuration. read less USED (low confidence) S. Saane and P. Onck, “Atomistic modeling of the stiffness, strength and charge-induced actuation of graphene nanofoams,” Extreme Mechanics Letters. 2015. link Times cited: 5 USED (low confidence) V. Dozhdikov, A. Basharin, and P. Levashov, “Quenching of liquid carbon under intensive heat transfer to the cold diamond substrate: Molecular-dynamic simulation,” Journal of Physics: Conference Series. 2015. link Times cited: 9 Abstract: Quenching of liquid carbon (T = 6600 K) on a cold diamond su… read moreAbstract: Quenching of liquid carbon (T = 6600 K) on a cold diamond substrate at T = 300 K in conditions close to the experimental laser melting of dispersed graphite on the substrate of natural diamond is investigated using molecular dynamics (MD) simulations. Quenching was carried out for two types of boundary conditions on the side opposite to the diamond substrate. The simulations confirmed the experimental result of the formation of amorphous carbon under such conditions. The calculations showed that the destruction of the diamond substrate did not take place because of its very high thermal conductivity. The estimation of the cooling rate of liquid carbon was done, the result is 1015 K/s. Temperature profiles in different layers of liquid carbon were restored to reproduce the detailed picture of the quenching process. We evaluated the radial distribution functions (RDF), the distribution of carbon atom bond fractions sp1-sp2-sp3, the average bond length and the azimuthal angles distributions for amorphous carbon atoms. This analysis confirmed that the amorphous carbon obtained by quenching in MD-simulations had a graphite-like structure. read less USED (low confidence) S. Zhao and J. Xue, “Modification of graphene supported on SiO2 substrate with swift heavy ions from atomistic simulation point,” Carbon. 2015. link Times cited: 41 USED (low confidence) E. Lotfi, M. Neek‐Amal, and M. Elahi, “Molecular dynamics simulation of temperature profile in partially hydrogenated graphene and graphene with grain boundary.,” Journal of molecular graphics & modelling. 2015. link Times cited: 4 USED (low confidence) A. Montazeri, S. Ebrahimi, A. Rajabpour, and H. Rafii-Tabar, “Molecular Dynamics Modeling of Buckling Behavior of Hydrogenated Graphyne,” NANO. 2015. link Times cited: 6 Abstract: Molecular dynamics simulation is employed to explore the inf… read moreAbstract: Molecular dynamics simulation is employed to explore the influence of hydrogen adsorption on the stability behavior of graphyne (GY) as a new allotrope of carbon. The strain for the onset of buckling is determined for pristine GY and the results are compared with those for perfect graphene nanoribbons under identical conditions. The results reveal that due to the presence of triple C–C bonds in the GY structure, which are harder to rotate and bend in compression compared to single bonds, the new allotrope is stiffer than graphene during buckling phenomenon. In addition, the effect of hydrogen adsorption on the stability behavior of GY is examined with different H coverage in the range 0–50%. It is concluded that this adsorption promotes a rapid buckling which is attributed to the conversion of the stiff in-plane carbon bonding in the GY structure to the out-of-plane bonding which is weaker and easier to bend in compression. Finally, a critical value of adsorption is found above in which such a trend is not observed. read less USED (low confidence) E. Hahn and M. Meyers, “Grain-size dependent mechanical behavior of nanocrystalline metals,” Materials Science and Engineering A-structural Materials Properties Microstructure and Processing. 2015. link Times cited: 162 USED (low confidence) S. Ebrahimi, “Influence of Stone–Wales defects orientations on stability of graphene nanoribbons under a uniaxial compression strain,” Solid State Communications. 2015. link Times cited: 7 USED (low confidence) F. Meng, C. Chen, and J. Song, “Dislocation Shielding of a Nanocrack in Graphene: Atomistic Simulations and Continuum Modeling.,” The journal of physical chemistry letters. 2015. link Times cited: 39 Abstract: Combining atomistic simulations and continuum modeling, we s… read moreAbstract: Combining atomistic simulations and continuum modeling, we studied dislocation shielding of a nanocrack in monolayer graphene under mode-I loading. Different crack-dislocation configurations were constructed and the shielding effects on the threshold stress intensity for crack propagation were examined. Excellent agreement between simulation results and linear-elastic fracture mechanics (LEFM) predictions was achieved. As the separation between the crack-tip and dislocation, that is, rR, varies (with respect to the crack size a), the shielding effect exhibits two different dependences on rR, scaling as 1/rR 1/2 for rR/a ≪ 1 (near-tip), whereas 1/rR for rR/a ≫ 1 (far-field), respectively. Particularly, the far-field 1/rR scaling was shown to be a direct manifestation of the stress field of dislocation in graphene. Our work presents a systematic study of nanoscale crackdislocation interactions in graphene, providing valuable information on defect engineering of graphene. read less USED (low confidence) A. Fereidoon, M. Khorasani, M. Ganji, and F. Memarian, “Atomistic simulation study of mechanical properties of periodic graphene nanobuds,” Computational Materials Science. 2015. link Times cited: 7 USED (low confidence) F. Memarian, A. Fereidoon, and M. Ganji, “Graphene Young’s modulus: Molecular mechanics and DFT treatments,” Superlattices and Microstructures. 2015. link Times cited: 90 USED (low confidence) S. Huang, M. Feng, B. Wang, X. Xu, X. Cao, and Y. Wang, “Molecular dynamics simulation on the fabrication of graphene nanoscrolls with ferromagnetic nanowire templates,” Applied Surface Science. 2015. link Times cited: 2 USED (low confidence) E. Koukaras, G. Kalosakas, C. Galiotis, and K. Papagelis, “Phonon properties of graphene derived from molecular dynamics simulations,” Scientific Reports. 2015. link Times cited: 103 USED (low confidence) A. Narjabadifam, F. Vakili-Tahami, M. Zehsaz, and M. M. S. Fakhrabadi, “Three-dimensional modal analysis of carbon nanocones using molecular dynamics simulation,” Journal of Vacuum Science & Technology. B. Nanotechnology and Microelectronics: Materials, Processing, Measurement, and Phenomena. 2015. link Times cited: 5 Abstract: The resonant frequencies of carbon nanocones and their corre… read moreAbstract: The resonant frequencies of carbon nanocones and their corresponding mode shapes are investigated through molecular dynamics simulations. The three-dimensional vibrational mode shapes are extracted using the time histories of the three coordinates of each atom obtained from conducting one molecular dynamics simulation. Unlike the previous studies, the proposed technique is able to predict precisely all of the possible mode shapes including transverse, radial, torsional, and longitudinal modes within one molecular dynamics run. The effects of length, apex angle, and boundary conditions on the resonant characteristics of carbon nanocones are examined. The results indicate that the apex angle not only affects the resonant frequencies but also influences the shape and order of modal displacements. In addition, it is observed that the sensitivity of the resonant frequencies to the boundary conditions depends on the shape of the modal displacement. read less USED (low confidence) S. N. Korobeynikov, V. Alyokhin, B. Annin, and A. V. Babichev, “Quasi-static buckling simulation of single-layer graphene sheets by the molecular mechanics method,” Mathematics and Mechanics of Solids. 2015. link Times cited: 21 Abstract: This paper presents a quasi-static nonlinear buckling analys… read moreAbstract: This paper presents a quasi-static nonlinear buckling analysis of compressed single-layer graphene sheets (SLGSs) using the molecular mechanics method. Bonded interactions between carbon atoms are simulated using a modified parameter set of the DREIDING force field that leads to better agreement between simulated mechanical properties of graphene and reference literature data than the standard parameter set of this force field (see Mayo et al., J Phys Chem 1990; 94: 8897–8909). Identification of constraints of atoms of the SLGS edges with the boundary conditions of clamped and simply supported thin plates is made. The buckling loads and modes obtained by linear and nonlinear buckling analysis of a compressed quadratic SLGS with a side length of 6 nm are shown to be close to each other. In addition, it has been found by nonlinear buckling analysis that only equilibrium configurations with modes of initial post-buckling deformed configurations correlated with the one-half-wave column-like buckling mode have stable equilibrium configurations for clamped and simply supported SLGSs. As the edges of a simply supported SLGS approach each other, the geometry of this mode of post-buckling deformation with inclusion of the non-bonded van der Waals (vdW) interactions between carbon atoms becomes closer to the geometry of a single-walled carbon nanotube, and without inclusion of the vdW interactions, this mode has the geometry of a cylinder with a drop-shaped cross-section. read less USED (low confidence) Y. Li, D. Datta, and Z. Li, “Anomalous mechanical characteristics of graphene with tilt grain boundaries tuned by hydrogenation,” Carbon. 2015. link Times cited: 30 USED (low confidence) J.-wei Feng, H.-ming Ding, and Y.-qiang Ma, “Self-assembly of fullerenes and graphene flake: A molecular dynamics study,” Carbon. 2015. link Times cited: 25 USED (low confidence) C. Tiwary et al., “Chemical-free graphene by unzipping carbon nanotubes using cryo-milling,” Carbon. 2015. link Times cited: 33 USED (low confidence) Y. Chu, T. Ragab, P. Gautreau, and C. Basaran, “Mechanical Properties of Hydrogen Edge–Passivated Chiral Graphene Nanoribbons,” Journal of Nanomechanics and Micromechanics. 2015. link Times cited: 22 Abstract: AbstractUniaxial tension of chiral graphene nanoribbons (GNR… read moreAbstract: AbstractUniaxial tension of chiral graphene nanoribbons (GNR) with and without edge hydrogen passivation are simulated using molecular dynamics (MD) simulations to study their mechanical properties. The results demonstrate that hydrogen saturation generally weakens chiral GNRs, although its influence on armchair GNRs is almost negligible. Mechanical properties of GNRs depend on chiral angles. Zigzag GNRs (chiral angle 0°) are always the strongest, whereas armchair GNRs (chiral angle 30°) are weaker. The mechanical properties of other chiral GNRs evolve gradually from these two distinct cases from chiral angles of 30° to 0°, with the smallest value of failure stress and failure strain happening around a chiral angle of 20°. As for the width size effect, wider GNRs always have lower failure strains and failure stress regardless of having edge hydrogen passivation or not. read less USED (low confidence) K. Dilrukshi, M. Dewapriya, and U. Puswewala, “Size dependency and potential field influence on deriving mechanical properties of carbon nanotubes using molecular dynamics,” Theoretical and Applied Mechanics Letters. 2015. link Times cited: 46 USED (low confidence) H. Zhao, J. B. Liu, and X. Song, “Microstructural Investigation of CNT-Metal Bonding Behavior through Computational Simulations,” Journal of Nano Research. 2015. link Times cited: 1 Abstract: Mechanism of CNT-metal bonding is investigated using molecul… read moreAbstract: Mechanism of CNT-metal bonding is investigated using molecular dynamics in this study. Both bonding and debonding process are considered. It is shown that the bonding can be achieved at a temperature lower than the melting point. The surface melting and capillary wetting dominate the bonding process. In addition, there are two potential failure positions, one is at CNT-Ni interface and the other is at nickel surface which are determined by the strength competition of these two interfaces. To obtain high bonding strength we should form coalescence structure between CNT and the metal at a higher temperature to achieve larger contact length. Also we find that the debonding process experiences elastic deformation followed by debonding at CNT-Ni or Ni–Ni interface. read less USED (low confidence) C. M. Shumeyko and E. Webb, “A molecular dynamics study of lithium grain boundary intercalation in graphite,” Scripta Materialia. 2015. link Times cited: 5 USED (low confidence) Y. Xiang and H. S. Shen, “Shear buckling of rippled graphene by molecular dynamics simulation,” Materials today communications. 2015. link Times cited: 22 USED (low confidence) J. Tian et al., “Capacity of graphite’s layered structure to suppress the sputtering yield: A molecular dynamics study,” Applied Surface Science. 2015. link Times cited: 6 USED (low confidence) J. Huang and C. Wong, “Hydrogen transportation properties in carbon nano-scroll investigated by using molecular dynamics simulations,” Computational Materials Science. 2015. link Times cited: 8 USED (low confidence) X. Wu, H. Zhao, and J. Pei, “Fabrication of nanopore in graphene by electron and ion beam irradiation: Influence of graphene thickness and substrate,” Computational Materials Science. 2015. link Times cited: 34 USED (low confidence) S. Huang, B. Wang, M. Feng, X. Xu, X. Cao, and Y. Wang, “Carbon nanoscrolls fabricated from graphene nanoribbons using Ni nanowire templates: A molecular dynamics simulation,” Surface Science. 2015. link Times cited: 11 USED (low confidence) M. Chen, S. Quek, Z. Sha, C. Chiu, Q. Pei, and Y.-W. Zhang, “Effects of grain size, temperature and strain rate on the mechanical properties of polycrystalline graphene – A molecular dynamics study,” Carbon. 2015. link Times cited: 125 USED (low confidence) H. M. Yoon, Y. Jung, S. Jun, S. Kondaraju, and J. S. Lee, “Molecular dynamics simulations of nanoscale and sub-nanoscale friction behavior between graphene and a silicon tip: analysis of tip apex motion.,” Nanoscale. 2015. link Times cited: 23 Abstract: A sliding object on a crystal surface with a nanoscale conta… read moreAbstract: A sliding object on a crystal surface with a nanoscale contact will always experience stick-slip movement. However, investigation of the slip motion itself is rarely performed due to the short slip duration. In this study, we performed molecular dynamics simulation and frictional force microscopy experiments for the precise observation of slip motion between a graphene layer and a crystalline silicon tip. The simulation results revealed a hierarchical structure of stick and slip motion. Nanoscale stick and slip motion is composed of sub-nanoscale stick and slip motion. Sub-nanoscale stick and slip motion occurred on a timescale of a few ps and a force scale of 10(-1) nN. The relationship between the trajectories of the silicon tip and stick-slip peak revealed that in-plane and vertical motions of the tip provide information about stick and slip motion in the sub-nanoscale and nanoscale ranges, respectively. Parametric studies including tip size, scan angle, layer thickness, and flexibility of the substrate were also carried out to compare the simulation results with findings on lateral force microscopy. read less USED (low confidence) G. Jung, Z. Qin, and M. Buehler, “Molecular mechanics of polycrystalline graphene with enhanced fracture toughness,” Extreme Mechanics Letters. 2015. link Times cited: 118 USED (low confidence) Y. Zhang, Q. Pei, X. He, and Y. Mai, “A molecular dynamics simulation study on thermal conductivity of functionalized bilayer graphene sheet,” Chemical Physics Letters. 2015. link Times cited: 31 USED (low confidence) A. R. Chowdhury, S. Koh, and C. Wang, “Nonlinear-elastic membrane-shell model for single-walled carbon nanotubes under uni-axial deformation ☆,” Computational Materials Science. 2015. link Times cited: 2 USED (low confidence) X. Yang, Y. Huang, and L. Wang, “Molecular Dynamics Study on the Generation of Single-Walled Carbon Nanotubes Junction by Direct C60 Bombardment,” Advanced Materials Research. 2015. link Times cited: 0 Abstract: Carbon nanotubes have been considered as promising materials… read moreAbstract: Carbon nanotubes have been considered as promising materials for applications of nanodevices. As building blocks, carbon nanotube junctions formed by carbon-carbon covalent bonds are desired nanostructures for carbon nanotube based materials, however the formation of the junctions made of C-C bonds is still quite challenging. In this paper, a molecular dynamics study on the generation of single-walled carbon nanotubes junction by direct C60 bombardment is conducted. Results show that carbon nanotube junctions can be formed by direct C60 bombardment, however the structure of the formed junction is similar as the riveted structure in some case and the C60 bombardment may lead to uncontrollable bonding disorder in the joints. read less USED (low confidence) Z. Ozturk, C. Baykasoğlu, A. T. Celebi, M. Kırca, A. Mugan, and A. To, “Hydrogen storage in heat welded random CNT network structures,” International Journal of Hydrogen Energy. 2015. link Times cited: 38 USED (low confidence) Z. Sha et al., “On the failure load and mechanism of polycrystalline graphene by nanoindentation,” Scientific Reports. 2014. link Times cited: 53 USED (low confidence) S. Okamoto and A. Ito, “Molecular Dynamics Analysis on Compressive Strength of PAN-Based Carbon Fibers,” International Journal of Nanoscience. 2014. link Times cited: 1 Abstract: We investigated the compressive strength of PAN-based carbon… read moreAbstract: We investigated the compressive strength of PAN-based carbon fibers containing both amorphous and crystalline structures using molecular dynamics simulations. In addition, we investigated the buckling behavior of graphene and graphite crystals under compressive loading. The calculated buckling stresses of those crystals with different aspect ratios agree well with the results by the Euler's buckling theory. We finally found that the compressive strength of the PAN-based carbon fiber with a large amount of amorphous structures was 11 GPa. Moreover, a fracture of the PAN-based carbon fiber begins due to the buckling of carbon layers in crystallites, and propagates with the shear slipping in the crystallites. On the other hand, the compressive strength of the carbon fiber with a small amount of amorphous structures was only 2 GPa. Thus, it was found that the amorphous structure significantly affects the compressive strength of PAN-based carbon fibers. read less USED (low confidence) B. Farbos et al., “Nanoscale structure and texture of highly anisotropic pyrocarbons revisited with transmission electron microscopy, image processing, neutron diffraction and atomistic modeling,” Carbon. 2014. link Times cited: 49 USED (low confidence) T. Zhang, X. Li, and H. Gao, “Designing graphene structures with controlled distributions of topological defects: A case study of toughness enhancement in graphene ruga,” Extreme Mechanics Letters. 2014. link Times cited: 97 USED (low confidence) J. Shi, G. Yang, X. L. Li, and X. Huang, “Interfacial Thermal Resistance and Thermal Rectification in Graphene with Geometric Variations of Doped Nitrogen: A Molecular Dynamics Study,” Advanced Materials Research. 2014. link Times cited: 3 Abstract: Using classical non-equilibrium molecular dynamics simulatio… read moreAbstract: Using classical non-equilibrium molecular dynamics simulations (NEMD), the interfacial thermal resistance and thermal rectification of nitrogen-doped zigzag graphene (NDZG) are investigated. Two different structural models about nitrogen-doped graphene are constructed. It is found that the interfacial thermal resistance at the location of nitrogen-doping causes severe reduction in thermal conductivity of the NDZG. Thermal rectification of the triangular single-nitrogen-doped graphene (SNDG) decreases with increasing temperature. However, thermal rectification is not detected in the parallel various–nitrogen-doped graphene (VNDG). These results suggest that SNDG might be a promising structure for thermal device. read less USED (low confidence) Y. Rosandi and H. Urbassek, “Subsurface and interface channeling of keV ions in graphene/SiC,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2014. link Times cited: 1 USED (low confidence) P. Wu et al., “Thermal transport behavior of polycrystalline graphene: A molecular dynamics study,” Journal of Applied Physics. 2014. link Times cited: 28 Abstract: The thermal transport behavior of polycrystalline graphene i… read moreAbstract: The thermal transport behavior of polycrystalline graphene is studied using molecular dynamics simulations, with focus on the effects of grain size, tensile strain, and temperature on the thermal conductivity. All the simulation samples have the same overall dimensions of 30 × 30 nm with average grain sizes ranging from 2.5 to 12.5 nm. It is found that polycrystalline graphene exhibits a significant reduction in thermal conductivity compared to single-crystalline graphene, and the smaller the grain size is, the more the thermal conductivity drops. The thermal conductivity of polycrystalline graphene with average grain size of 2.5 nm is only about 20% of single-crystalline graphene. However, the thermal conductivity of polycrystalline graphene is less sensitive to both the applied strain and temperature than that of single-crystalline graphene. The underlying mechanisms for the differences in thermal behavior are examined and discussed. These findings are important for the thermal management of graphene-ba... read less USED (low confidence) S. Bhoi, T. Banerjee, and K. Mohanty, “Molecular dynamic simulation of spontaneous combustion and pyrolysis of brown coal using ReaxFF,” Fuel. 2014. link Times cited: 131 USED (low confidence) X. Li, S. Xu, P. Ke, and A. Wang, “Thickness dependence of properties and structure of ultrathin tetrahedral amorphous carbon films: A molecular dynamics simulation,” Surface & Coatings Technology. 2014. link Times cited: 9 USED (low confidence) Z. Postawa, M. Kański, D. Maciążek, R. Paruch, and B. Garrison, “Computer simulations of sputtering and fragment formation during keV C60 bombardment of octane and β‐carotene,” Surface and Interface Analysis. 2014. link Times cited: 5 Abstract: Molecular dynamics computer simulations are used to investig… read moreAbstract: Molecular dynamics computer simulations are used to investigate material ejection and fragment formation during keV C60 bombardment of organic solids composed from small (octane) and medium (β‐carotene)‐sized organic molecules. Both systems are found to sputter efficiently. For the octane system, material removal occurs predominantly by ejection of intact molecules, whereas fragment emission is a main ejection channel for β‐carotene. A difference in the molecular dimensions is proposed to explain this observation. Fragment formation is investigated to answer the question why so few fragments remain in the bombarded solid. Copyright © 2014 John Wiley & Sons, Ltd. read less USED (low confidence) Z.-dan Zhang et al., “A coarse-grained molecular dynamics – reactive Monte Carlo approach to simulate hyperbranched polycondensation,” RSC Advances. 2014. link Times cited: 9 Abstract: A coarse-grained molecular dynamics (CG-MD) and reactive Mon… read moreAbstract: A coarse-grained molecular dynamics (CG-MD) and reactive Monte Carlo (RMC) hybrid method (CG-MD + RMC) has been developed to investigate the hyperbranched polycondensation of 3,5-bis(trimethylsiloxy)benzoyl chloride to poly(3,5-dihydroxybenzoic acid). The CG force field to describe the formation of the hyperbranched macromolecules has been extracted from all-atom molecular dynamics simulations by the mapping technology of iterative Boltzmann inversion. In the mapping process branched poly(3,5-dihydroxybenzoic acid) in an all-atom description has been employed as a target object to derive the CG force field for hyperbranched polymers. In the RMC simulations, the reactivity ratio of the functional groups has been optimized by fitting experimental data with the iterative dichotomy method (Macromolecules, 2003, 36, 97). Using such a simulation framework, detailed information including the molecular weight, the molecular weight distribution and the branching degree of a specific polymerization process has been derived. Radial distribution functions of the atomistic and coarse-grained systems are in excellent agreement. A good agreement between the present simulations and experiment has been demonstrated, too. Especially, the intramolecular cyclization fraction has been reproduced quantitatively. This work illustrates that the present reactive CG-MD + RMC model can be used for quantitative studies of specific hyperbranched polymerizations. read less USED (low confidence) A. Favata, A. Micheletti, P. Podio-Guidugli, and N. Pugno, “Geometry and Self-stress of Single-Wall Carbon Nanotubes and Graphene via a Discrete Model Based on a 2nd-Generation REBO Potential,” Journal of Elasticity. 2014. link Times cited: 33 USED (low confidence) R. Nazemnezhad and S. Hosseini-Hashemi, “Free vibration analysis of multi-layer graphene nanoribbons incorporating interlayer shear effect via molecular dynamics simulations and nonlocal elasticity,” Physics Letters A. 2014. link Times cited: 53 USED (low confidence) J. Dai, C. Zhang, F. Mao, W. Cheng, and F.-S. Zhang, “Dynamical processes of low-energy carbon ion collision with the graphene supported by diamond,” European Physical Journal-applied Physics. 2014. link Times cited: 1 Abstract: The dynamical processes of a low-energy carbon ion collision… read moreAbstract: The dynamical processes of a low-energy carbon ion collision with the graphene sheet supported by diamond at three impact positions are studied by using empirical potential molecular dynamics simulations. The energy transformation and the structural evolution have been studied. Five types of processes are observed: adsorption, hybridization, defects formation in diamond, atom emission and transmission. We find that the irradiation damage is closely related to the incident energy and impact position. In our simulations, as the projectile collides at a graphene atom, it transfers most of its energy to the primary knock-on atom, and defects are created in graphene. When the projectile moves perpendicular towards the center of a C-C bond in the graphene sheet, the energy transferred from the projectile to the atoms associated with the bond increases firstly and then decreases with the increasing incident energy, and the graphene sheet remains two-dimensional crystal structure after collision when the incident energy is larger than 360 eV. While the impact location is the center of a hexagonal ring on the graphene sheet, the energy transferred from the projectile to the atoms of the target ring is very small regardless of how large is the incident energy, and the graphene sheet is able to keep perfect crystal structure when the incident energy is larger than 34 eV. read less USED (low confidence) D. Delgado and R. Vila, “Hydrogen species in diamond: Molecular dynamics simulation in bulk diamond for fusion applications,” Journal of Nuclear Materials. 2014. link Times cited: 1 USED (low confidence) M. Nishimura, Y. Takagi, and M. Arai, “Buckling Behavior and Atomic Elastic Stiffness in Defective Multi-Walled Carbon Nanotube under Axial Compression,” Key Engineering Materials. 2014. link Times cited: 4 Abstract: Axial compressive simulations are performed on defective and… read moreAbstract: Axial compressive simulations are performed on defective and non-defective multiwalledcarbon nanotubes (MWCNTs) using the molecular dynamics method, and the effectof defects upon the buckling behavior is discussed. In our previous study, changes in atomicstresses in MWCNTs with three layers were evaluated until buckling occurred. That studysuggested that the transition from homogeneous stress distributions to inhomogeneous onesplays an important role in the occurrence of buckling in MWCNTs, though the critical stressesor strains relating to buckling are dependent upon the structure and location of defects. In thepresent study, the atomic elastic stiffness of each atom, Bij , is evaluated to discuss the onsetof local buckling in MWCNTs with five layers. The det(Bij) of all atoms is found to change toa negative value long before buckling occurs, while the second smallest eigenvalues of Bij forsome atoms change to a negative value just prior to buckling. The existence of dense regions ofatoms that have two negative eigenvalues of Bij are found to vary as a function of the defectlocation, and to correspond with onset points of local buckling. read less USED (low confidence) I. E. Awad and L. Ladani, “Cohesive Zone Model for the Interface of Multiwalled Carbon Nanotubes and Copper: Molecular Dynamics Simulation,” Journal of Nanotechnology in Engineering and Medicine. 2014. link Times cited: 12 Abstract: Due to their superior mechanical and electrical properties, … read moreAbstract: Due to their superior mechanical and electrical properties, multiwalled carbon nano- tubes (MWCNTs) have the potential to be used in many nano-/micro-electronic applications, e.g., through silicon vias (TSVs), interconnects, transistors, etc. In particular, use of MWCNT bundles inside annular cylinders of copper (Cu) as TSV is proposed in this study. However, the significant difference in scale makes it difficult to evaluate the interfacial mechanical integrity. Cohesive zone models (CZM) are typically used at large scale to determine the mechanical adherence at the interface. However, at molecular level, no routine technique is available. Molecular dynamic (MD) simulations is used to determine the stresses that are required to separate MWCNTs from a copper slab and generate normal stress–displacement curves for CZM. Only van der Waals (vdW) interaction is considered for MWCNT/Cu interface. A displacement controlled loading was applied in a direction perpendicular to MWCNT’s axis in different cases with different number of walls and at different temperatures and CZM is obtained for each case. Fur- thermore, their effect on the CZM key parameters (normal cohesive strength ð r max Þ and the corresponding displacement ð d n Þ has been studied. By increasing the number of the walls of the MWCNT, r max was found to nonlinearly decrease. Displacement at maximum stress, d n , showed a nonlinear decrease as well with increasing the number of walls. Tem- perature effect on the stress–displacement curves was studied. When temperature was increased beyond 1 K, no relationship was found between the maximum normal stress and temperature. Likewise, the displacement at maximum load did not read less USED (low confidence) M. Dewapriya and R. Rajapakse, “Molecular Dynamics Simulations and Continuum Modeling of Temperature and Strain Rate Dependent Fracture Strength of Graphene With Vacancy Defects,” Journal of Applied Mechanics. 2014. link Times cited: 76 USED (low confidence) T.-H. Liu, C. Pao, and C.-C. Chang, “Mechanical mutability of polycrystalline graphene from atomistic simulations,” Computational Materials Science. 2014. link Times cited: 4 USED (low confidence) M. Calvaresi and F. Zerbetto, “Atomistic molecular dynamics simulations reveal insights into adsorption, packing, and fluxes of molecules with carbon nanotubes,” Journal of Materials Chemistry. 2014. link Times cited: 38 Abstract: This feature article discusses the current progress and the … read moreAbstract: This feature article discusses the current progress and the problems of applications of atomistic simulations to the understanding of the basic phenomena that govern molecule–carbon nanotube (CNT) interactions that have relevance for gas storage, sustainability and living. Molecular adsorption is assessed in the light of molecular dynamics, MD, simulations that reveal the most favourable adsorption sites of molecules and allow the interpretation of experimental data and the determination of the energy contributions to the binding. Packing is examined in view of calculations for the application of CNTs for gas storage and CO2 capture and removal. Fluxes are discussed for the separation of different types of ions in water, seawater desalination, removal of drinking water contaminants, and gas separation. Difficulties related to the modelling and to possible improvement and upscaling of the calculations are also addressed. read less USED (low confidence) V. Vahdat et al., “Atomic-scale wear of amorphous hydrogenated carbon during intermittent contact: a combined study using experiment, simulation, and theory.,” ACS nano. 2014. link Times cited: 52 Abstract: In this study, we explore the wear behavior of amplitude mod… read moreAbstract: In this study, we explore the wear behavior of amplitude modulation atomic force microscopy (AM-AFM, an intermittent-contact AFM mode) tips coated with a common type of diamond-like carbon, amorphous hydrogenated carbon (a-C:H), when scanned against an ultra-nanocrystalline diamond (UNCD) sample both experimentally and through molecular dynamics (MD) simulations. Finite element analysis is utilized in a unique way to create a representative geometry of the tip to be simulated in MD. To conduct consistent and quantitative experiments, we apply a protocol that involves determining the tip-sample interaction geometry, calculating the tip-sample force and normal contact stress over the course of the wear test, and precisely quantifying the wear volume using high-resolution transmission electron microscopy imaging. The results reveal gradual wear of a-C:H with no sign of fracture or plastic deformation. The wear rate of a-C:H is consistent with a reaction-rate-based wear theory, which predicts an exponential dependence of the rate of atom removal on the average normal contact stress. From this, kinetic parameters governing the wear process are estimated. MD simulations of an a-C:H tip, whose radius is comparable to the tip radii used in experiments, making contact with a UNCD sample multiple times exhibit an atomic-level removal process. The atomistic wear events observed in the simulations are correlated with under-coordinated atomic species at the contacting surfaces. read less USED (low confidence) A. T. Celebi, M. Kırca, C. Baykasoğlu, A. Mugan, and A. To, “Tensile behavior of heat welded CNT network structures,” Computational Materials Science. 2014. link Times cited: 19 USED (low confidence) Q. Wang, C. Wang, Y. Zhang, and T. Li, “Molecular dynamics study on interfacial thermal conductance of unirradiated and irradiated SiC/C,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2014. link Times cited: 11 USED (low confidence) Y. Zhou et al., “Mechanics of nanoscale wrinkling of graphene on a non-developable surface,” Carbon. 2014. link Times cited: 35 USED (low confidence) L. Xie, P. Brault, J. Bauchire, A. Thomann, and L. Bedra, “Molecular dynamics simulations of clusters and thin film growth in the context of plasma sputtering deposition,” Journal of Physics D: Applied Physics. 2014. link Times cited: 40 Abstract: Carrying out molecular dynamics (MD) simulations is a releva… read moreAbstract: Carrying out molecular dynamics (MD) simulations is a relevant way to understand growth phenomena at the atomic scale. Initial conditions are defined for reproducing deposition conditions of plasma sputtering experiments. Two case studies are developed to highlight the implementation of MD simulations in the context of plasma sputtering deposition: ZrxCu1−x metallic glass and AlCoCrCuFeNi high entropy alloy thin films deposited onto silicon. Effects of depositing atom kinetic energies and atomic composition are studied in order to predict the evolution of morphologies and atomic structure of MD grown thin films. Experimental and simulated x-ray diffraction patterns are compared. read less USED (low confidence) X.-Y. Sun, R. Wu, R. Xia, X. Chu, and Y. Xu, “Effects of Stone-Wales and vacancy defects in atomic-scale friction on defective graphite,” Applied Physics Letters. 2014. link Times cited: 36 Abstract: Graphite is an excellent solid lubricant for surface coating… read moreAbstract: Graphite is an excellent solid lubricant for surface coating, but its performance is significantly weakened by the vacancy or Stone-Wales (SW) defect. This study uses molecular dynamics simulations to explore the frictional behavior of a diamond tip sliding over a graphite which contains a single defect or stacked defects. Our results suggest that the friction on defective graphite shows a strong dependence on defect location and type. The 5-7-7-5 structure of SW defect results in an effectively negative slope of friction. For defective graphite containing a defect in the surface, adding a single vacancy in the interior layer will decrease the friction coefficients, while setting a SW defect in the interior layer may increase the friction coefficients. Our obtained results may provide useful information for understanding the atomic-scale friction properties of defective graphite. read less USED (low confidence) R. Rahman and J. Foster, “Deformation mechanism of graphene in amorphous polyethylene: A molecular dynamics based study,” Computational Materials Science. 2014. link Times cited: 25 USED (low confidence) J. Polvi and K. Nordlund, “Comparison of low-energy β radiation effects in polyethylene and cellulose by molecular dynamics simulations,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2014. link Times cited: 8 USED (low confidence) A. Galashev, “Computer stability test for aluminum films heated on a graphene sheet,” Technical Physics. 2014. link Times cited: 20 USED (low confidence) A. R. Chowdhury, C. Wang, and S. Koh, “Continuum Shell Model for Buckling of Single-Walled Carbon Nanotubes with Different Chiral Angles,” International Journal of Structural Stability and Dynamics. 2014. link Times cited: 5 Abstract: In this paper, an equivalent thick cylindrical shell model i… read moreAbstract: In this paper, an equivalent thick cylindrical shell model is proposed for the buckling analysis of short single-walled carbon nanotubes (SWCNTs) with allowance for different chiral angles. Extensive, molecular dynamics (MD) simulations are first performed using the adaptive intermolecular reactive bond order potential to determine the critical buckling loads/strains. The MD simulations buckling results are then used as reference solutions to calibrate the properties of the thick cylindrical shell model. Central to this development is the establishment of an empirical expression for the Young's modulus that is a function of both the diameter and the chiral angle of the SWCNT. For the shell model, we have assumed that the Poisson ratio ν = 0.19 and the shell thickness h = 0.066 nm. It will be shown that the proposed shell model furnishes good estimates of the critical buckling loads for SWCNTs with different chiral angles. The critical buckling strains are also evaluated from the critical buckling load with the aid of the stress-strain relation of SWCNTs. read less USED (low confidence) R. Ansari, H. Rouhi, and S. Sahmani, “Free vibration analysis of single- and double-walled carbon nanotubes based on nonlocal elastic shell models,” Journal of Vibration and Control. 2014. link Times cited: 47 Abstract: In the present study, the free vibration characteristics of … read moreAbstract: In the present study, the free vibration characteristics of single- and double-walled carbon nanotubes (SWCNTs and DWCNTs) are investigated on the basis of a nonlocal elastic shell model. Eringen’s nonlocal elasticity equations are applied to the classical Donnell shell theory to incorporate the size-effects into the vibration analysis of carbon nanotubes (CNTs). An exact solution is developed for the governing equations of the nonlocal elastic shell model with the inclusion of size effects. Molecular dynamics (MD) simulations are performed to obtain fundamental frequencies of SWCNTs and DWCNTs with different values of aspect ratio and types of chirality. To derive the appropriate values of a nonlocal parameter for vibrations of SWCNTs and DWCNTs, the results of the continuum model are matched with those of MD simulations. This study shows that the small scale effects in the nonlocal model make nanotubes more flexible. read less USED (low confidence) Q. Liang and Y. Wei, “Molecular dynamics study on the thermal conductivity and thermal rectification in graphene with geometric variations of doped boron,” Physica B-condensed Matter. 2014. link Times cited: 21 USED (low confidence) X. Qin, T. Gao, W. Yan, X. Guo, and Q. Xie, “Molecular dynamics simulation of graphene bombardment with Si ion,” Journal of Molecular Structure. 2014. link Times cited: 14 USED (low confidence) M. Mahnama and R. Naghdabadi, “Molecular dynamics simulation of orientation dependency in the shock-induced phase transition of C60 fullerene single crystals into amorphous diamond,” Phase Transitions. 2014. link Times cited: 1 Abstract: A molecular dynamics simulation of the shock-wave propagatio… read moreAbstract: A molecular dynamics simulation of the shock-wave propagation in the face-centered cubic (FCC) structured C60 fullerene along the <100>, <110> and <111> crystallographic directions is performed. For this purpose, the response of the material under different shock-wave loadings is studied through Hugoniot curves. Three regimes of the material behavior have been observed from fully elastic to elastic–plastic to plastic. The Hugoniot elastic limit and the phase transition are also investigated along different crystallographic directions. It is shown that the shock wave travels faster along the <110> and <111> directions than in the <100> direction in the material. Comparing the results with the experimental data, it is found that the trends of the Hugoniot data are the same as the experiments. Also, the piston velocities corresponding to different structures, such as the FCC C60 fullerene, graphite like and final diamond like, are determined based on the Hugoniot results. Moreover, it is shown that after the phase-transition occurrence, at high piston velocities the material responses along the low-index directions merge with each other; thus, an amorphous structure is expected for the final diamond-like phase. read less USED (low confidence) S.-J. Guo, Q. Yang, X. He, and K. Liew, “Modeling of interface cracking in copper–graphite composites by MD and CFE method,” Composites Part B-engineering. 2014. link Times cited: 38 USED (low confidence) B. Jayasena, S. Subbiah, and C. Reddy, “Formation of Carbon Nanoscrolls During Wedge-Based Mechanical Exfoliation of HOPG,” Journal of Micro and Nano-Manufacturing. 2014. link Times cited: 12 USED (low confidence) J. Han, S. Ryu, D. Sohn, and S. Im, “Mechanical strength characteristics of asymmetric tilt grain boundaries in graphene,” Carbon. 2014. link Times cited: 69 USED (low confidence) A. R. Chowdhury, C. Wang, and S. Koh, “CONTINUUM SHELL MODEL FOR BUCKLING OF ARMCHAIR CARBON NANOTUBES UNDER COMPRESSION OR TORSION,” International Journal of Applied Mechanics. 2014. link Times cited: 24 Abstract: Molecular dynamics (MD) simulations are performed using adap… read moreAbstract: Molecular dynamics (MD) simulations are performed using adaptive intermolecular reactive bond order potential to analyze single-walled and double-walled carbon nanotubes. These carbon nanotubes were analyzed for buckling under compression and under torsion. The MD simulations create a comprehensive database for the critical buckling loads/strains and critical buckling torques/twist angles for armchair SWCNTs and DWCNTs of varying diameters and lengths. Using MD results as a computational benchmark, an equivalent thick shell model of CNT is proposed, which is amenable for analysis using a commercially available software ABAQUS. Based on our MD results, an empirical equation that describes the size-dependent Young's modulus for a single-walled carbon nanotube is established. Buckling analysis of CNT under compression and under torsion are performed with the equivalent shell model using size-dependent Young's modulus, Poisson's ratio = 0.19 and shell thickness h = 0.066 nm. We show that the equivalent shell model gives good estimate of critical buckling load/strain and critical buckling torque with respect to the MD results. Variation of critical twist angle with length of CNT, predicted by the shell model is in good qualitative agreement with MD simulation. However, the equivalent shell model underestimates the critical twist angle by 30% because the continuum shell model overestimates torsional stiffness of CNT compared to an atomistic model of CNT. The equivalent shell model is less computational intensive to implement as compared with MD. Its accuracy for predicting the buckling states for long carbon nanotubes allows it to be used for moderately long CNTs under compression/torsion, in-lieu of MD simulations. read less USED (low confidence) X. Liu, Z. Liu, P. Sun, Y. Wang, and Y. Wu, “Nanowelding of Single Walled Carbon Nanotubes onto Electrodes Using Molecular Dynamics Method,” Applied Mechanics and Materials. 2014. link Times cited: 0 Abstract: Nanowelding system is set up to investigate the welding proc… read moreAbstract: Nanowelding system is set up to investigate the welding process of nickel electrodes to single walled carbon nanotubes (SWCNTs) with molecular dynamics method. This system consists of C-C, C-Ni, Ni-Ni subsystems. The interaction of C-C, C-Ni Ni-Ni are modeled by adaptive intermolecular reactive empirical bonder order (AIREBO) potential, Lennard-Jones (LJ) potential, as well as embedded atomic method (EAM) model respectively. The dynamic process of nanowelding at different temperatures and times is analyzed and described completely at atomistic length scales. The simulation results indicate that the nanowelding could be accomplished at 1450k which is far lower than the melting point of nickel. read less USED (low confidence) Y. Sun, Y. Huang, D. Ma, T. Hu, and K. Xu, “Molecular dynamics simulation on double-elastic deformation of zigzag graphene nanoribbons at low temperature,” Materials Science and Engineering B-advanced Functional Solid-state Materials. 2014. link Times cited: 24 USED (low confidence) H. M. Yoon, S. Kondaraju, and J. S. Lee, “Molecular dynamics simulations of the friction experienced by graphene flakes in rotational motion,” Tribology International. 2014. link Times cited: 20 USED (low confidence) N. Silvestre, B. Faria, and J. Lopes, “Compressive behavior of CNT-reinforced aluminum composites using molecular dynamics,” Composites Science and Technology. 2014. link Times cited: 133 USED (low confidence) P. Süle and M. Szendrő, “The classical molecular dynamics simulation of graphene on Ru(0001) using a fitted Tersoff interface potential,” Surface and Interface Analysis. 2013. link Times cited: 6 Abstract: The accurate molecular dynamics simulation of weakly bound a… read moreAbstract: The accurate molecular dynamics simulation of weakly bound adhesive complexes, such as supported graphene (gr), is challenging because of the lack of an adequate interface potential. Instead of the widely used Lennard‐Jones potential for weak and long‐range interactions, we use a newly parameterized Tersoff potential for gr/Ru(0001) system. The new interfacial force field provides adequate moire superstructures in accordance with scanning tunneling microscopy images and with density functional theory (DFT) results. In particular, the corrugation of ξ ≈ 1.0 ± 0.2 Å is found that is somewhat smaller than found by DFT approaches (ξ ≈ 1.2 Å) and is close to scanning tunneling microscope measurements (ξ ≈ 0.8 ± 0.3 Å). The new potential could open the way toward large‐scale simulations of supported gr with adequate moire supercells in many fields of gr research. Moreover, the new interface potential might provide a new strategy in general for obtaining accurate interaction potentials for weakly bound adhesion in large‐scale systems in which atomic dynamics is inaccessible yet by accurate DFT calculations. Copyright © 2013 John Wiley & Sons, Ltd. read less USED (low confidence) H. S. Shen, Y.-M. Xu, and C.-li Zhang, “Prediction of nonlinear vibration of bilayer graphene sheets in thermal environments via molecular dynamics simulations and nonlocal elasticity,” Computer Methods in Applied Mechanics and Engineering. 2013. link Times cited: 74 USED (low confidence) Y. Kinoshita, M. Kawachi, T. Matsuura, and N. Ohno, “Axial buckling behavior of wavy carbon nanotubes: A molecular mechanics study,” Physica E-low-dimensional Systems & Nanostructures. 2013. link Times cited: 12 USED (low confidence) I. E. Awad and L. Ladani, “Interfacial Strength Between Single Wall Carbon Nanotubes and Copper Material: Molecular Dynamics Simulation,” Journal of Nanotechnology in Engineering and Medicine. 2013. link Times cited: 18 Abstract: Due to their promising mechanical and electrical properties,… read moreAbstract: Due to their promising mechanical and electrical properties, carbon nanotubes (CNTs) have the potential to be employed in many nano/microelectronic applications e.g., through silicon vias (TSVs), interconnects, transistors, etc. In particular, use of CNT bundles inside annular cylinders of copper (Cu) as TSV is proposed in this study. To evaluate mechanical integrity of CNT-Cu composite material, a molecular dynamics (MD) simulation of the interface between CNT and Cu is conducted. Different arrangements of single wall carbon nanotubes (SWCNTs) have been studied at interface of a Cu slab. Pullout forces have been applied to a SWCNT while Cu is spatially fixed. This study is repeated for several different cases where multiple CNT strands are interfaced with Cu slab. The results show similar behavior of the pull-out-displacement curves. After pull-out force reaches a maximum value, it oscillates around an average force with descending amplitude until the strand/s is/are completely pulled-out. A linear relationship between pull-out forces and the number of CNT strands was observed. Second order interaction effect was found to be negligible when multiple layers of CNTs were studied at the interface of Cu. C–Cu van der Waals (vdW) interaction was found to be much stronger than C–C vdW's interactions. Embedded length has no significance on the average pull-out force. However, the amplitude of oscillations increases as the length of CNTs increases. As expected when one end of CNT strand was fixed, owing to its extraordinary strength, large amount of force was required to pull it out. Finally, an analytical relationship is proposed to determine the interfacial shear strength between Cu and CNT bundle. read less USED (low confidence) P. Yang, X. Li, Y. Zhao, H. Yang, and S. Wang, “Effect of triangular vacancy defect on thermal conductivity and thermal rectification in graphene nanoribbons,” Physics Letters A. 2013. link Times cited: 39 USED (low confidence) B. Mortazavi and S. Ahzi, “Thermal conductivity and tensile response of defective graphene: A molecular dynamics study,” Carbon. 2013. link Times cited: 231 USED (low confidence) A. Mendonça, Y. D. Fomin, P. Malfreyt, and A. Pádua, “Novel ionic lubricants for amorphous carbon surfaces: molecular modeling of the structure and friction,” Soft Matter. 2013. link Times cited: 17 Abstract: The present article reports a molecular dynamics study of am… read moreAbstract: The present article reports a molecular dynamics study of ammonium based ionic liquids confined between surfaces of amorphous carbon. The ionic liquids studied herein are composed of alkylammonium cations combined with alkylsulfonate anions which due to their environmentally acceptable character are suitable candidates for lubrication. A model was built from first principles describing the interaction between ionic liquids and an amorphous carbon surface. A set of interaction parameters was obtained by fitting density functional theory potential energies of the interaction between fragments of ionic liquids and a cluster of diamond, with a site–site potential function. Molecular dynamics simulations using the developed potentials were performed, and the structure at the solid–liquid interface was analyzed, as well as the orientational order of the alkyl side chains with respect to the surface. Finally, by applying shear and load to the system we predict the friction coefficient at different values of shear velocities. read less USED (low confidence) Z. Ye, A. Otero-de-la-Roza, E. Johnson, and A. Martini, “Effect of tip shape on atomic-friction at graphite step edges,” Applied Physics Letters. 2013. link Times cited: 33 Abstract: Materials such as graphite exhibit step edges that affect th… read moreAbstract: Materials such as graphite exhibit step edges that affect their frictional behavior. Recent experimental studies found that an atomic force microscope tip can experience either an assisting force that facilitates sliding or a resistive force that impedes motion as it scans down a step. Here, an atomistic model is used to show that tip shape affects its trajectory on a graphite step edge, which determines the potential energy, and thus the frictional behavior. The relationship between trajectory and potential energy is confirmed using density-functional theory, which provides insight into the origin of the energy barrier at a step edge. read less USED (low confidence) I. Berinskii and F. Borodich, “Elastic in-plane properties of 2D linearized models of graphene,” Mechanics of Materials. 2013. link Times cited: 49 USED (low confidence) J. Wallace, D. Chen, J. Wang, and L. Shao, “Molecular dynamics simulation of damage cascade creation in SiC composites containing SiC/graphite interface,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2013. link Times cited: 8 USED (low confidence) H. Shang and W. Wang, “Shock responses of graphene reinforced composites via molecular dynamics simulations,” Journal of Physics: Conference Series. 2013. link Times cited: 10 Abstract: Shock responses of graphene reinforced composites are invest… read moreAbstract: Shock responses of graphene reinforced composites are investigated using molecular dynamics simulations. The first case studied is the response of spaced multilayer graphene plates under normal impact of a spherical projectile, focusing on the effect of the number of graphene monolayers per plate on the penetration resistance of the armor. The simulation results indicate that the penetration resistance increases with decreasing number of graphene monolayers per plate. The second case studied is the penetration resistance of laminated copper/graphene composites. The simulation results demonstrate that under normal impact by a spherical projectile the penetration resistance of copper can be improved significantly by laminating the copper plates with graphene. The results of this research have revealed the possibility that graphene might be used in hyper velocity-relevant armor systems to enhance their penetration resistance. read less USED (low confidence) A. Machado, D. Maroudas, and A. Muniz, “Tunable mechanical properties of diamond superlattices generated by interlayer bonding in twisted bilayer graphene,” Applied Physics Letters. 2013. link Times cited: 37 Abstract: Using molecular-dynamics simulations of tensile deformation … read moreAbstract: Using molecular-dynamics simulations of tensile deformation and shear loading tests, we determine the mechanical properties of superlattices of diamond-like nanocrystals embedded in twisted bilayer graphene (TBG) generated by covalent interlayer bonding through patterned hydrogenation. We find that the mechanical properties of these superstructures can be precisely tuned by controlling the fraction of sp3-hybridized C-C bonds in the material, fsp3, through the extent of chemical functionalization. The Young modulus and ultimate tensile strength weaken compared with pristine TBG with increasing fsp3, but they remain superior to those of most conventional materials. The interlayer shear modulus increases monotonically with fsp3. read less USED (low confidence) X. Li, J. Chen, C. Yu, and G. Zhang, “Comparison of isotope effects on thermal conductivity of graphene nanoribbons and carbon nanotubes,” Applied Physics Letters. 2013. link Times cited: 70 Abstract: By using molecular dynamics simulation, we explore the isoto… read moreAbstract: By using molecular dynamics simulation, we explore the isotope effect on thermal conductivity of graphene nanoribbons (GNRs) and carbon nanotubes (CNTs). For both GNRs and CNTs, the lattice thermal conductivity decreases when isotope concentration increases from 0% to 30%. The thermal conductivity reduction ratio in GNRs is less than that in CNTs. For example, thermal conductivity of CNT with 5% 13C concentration is 25% lower than that of pure CNTs; however, the reduction in thermal conductivity of GNRs with the same isotope concentration is only about 12%. Lattice dynamics analysis reveals that these phenomena are related to the phonon localization. read less USED (low confidence) J. N. Sarma, R. Chowdhury, and R. Jayaganthan, “Mechanical behavior of gallium nitride nanosheets using molecular dynamics,” Computational Materials Science. 2013. link Times cited: 13 USED (low confidence) R. Ansari and S. Sahmani, “Prediction of biaxial buckling behavior of single-layered graphene sheets based on nonlocal plate models and molecular dynamics simulations,” Applied Mathematical Modelling. 2013. link Times cited: 143 USED (low confidence) P. He, D. Xu, T. Lin, and Z. Jiao, “Joint properties between carbon nanotube and gold at different energy levels from molecular dynamics,” Computational Materials Science. 2013. link Times cited: 8 USED (low confidence) Y. He and Y.-Z. Tang, “THERMAL CONDUCTIVITY OF CARBON NANOTUBE/NATURAL RUBBER COMPOSITE FROM MOLECULAR DYNAMICS SIMULATIONS,” Journal of Theoretical and Computational Chemistry. 2013. link Times cited: 8 Abstract: Classical molecular dynamics (MD) simulations are employed t… read moreAbstract: Classical molecular dynamics (MD) simulations are employed to study the thermal conductivity of carbon nanotube/natural rubber (CNT/NR) composite. An aligned CNT/NR system is constructed by atomic potential function and periodic boundary condition and the anisotropic thermal conductivity is predicted in three main directions. The highest thermal conductivity of 80 W/(mK) is predicted along the axial direction of CNT. However, the transverse thermal conductivity perpendicular to the CNT axis is only about 0.6 W/(mK). For obtaining thermal conductivity of randomly oriented CNT/NR composite, an isotropic algorithm is provided from thermal resistance analysis method and results indicate the thermal conductivity improvement of randomly oriented CNT/NR composite is negligible. It is deduced therefore aligning CNTs in NR matrix can be a promising method in thermal management of CNT/NR composite. read less USED (low confidence) M. Nguyen and Y. Yum, “INVESTIGATION OF MODE II AND MIXED MODE FRACTURE OF SINGLE LAYER GRAPHENE SHEET.” 2013. link Times cited: 0 Abstract: The mode II fracture behavior of a single-layer graphene she… read moreAbstract: The mode II fracture behavior of a single-layer graphene sheet (SLGS) containing a center crack was characterized with the results of an atomistic simulation and an analytical model. The fracture of zigzag graphene models was analyzed with molecular dynamics and the mode II fracture toughness was found to be 2.04 MPa√m. The in-plane shear fracture of a cellular material was analyzed theoretically for deriving the KIIc of SLGS, and FEM results were obtained. Mixed-mode fracture of SLGS was studied for various mode I and mode II ratios. The mixed-mode fracture criterion was determined, and the obtained fracture envelope was in good agreement with that of another study. † Corresponding Author, yjyum@ulsan.ac.kr C 2014 The Korean Society of Mechanical Engineers read less USED (low confidence) V. Vijayaraghavan and C. Wong, “Temperature, defect and size effect on the elastic properties of imperfectly straight carbon nanotubes by using molecular dynamics simulation,” Computational Materials Science. 2013. link Times cited: 56 USED (low confidence) Y.-M. Xu, H. S. Shen, and C.-li Zhang, “Nonlocal plate model for nonlinear bending of bilayer graphene sheets subjected to transverse loads in thermal environments,” Composite Structures. 2013. link Times cited: 72 USED (low confidence) T.-H. Liu, C. Pao, and C.-C. Chang, “Thermal response of grain boundaries in graphene sheets under shear strain from atomistic simulations,” Computational Materials Science. 2013. link Times cited: 19 USED (low confidence) M. M. S. Fakhrabadi, P. K. Khorasani, A. Rastgoo, and M. Ahmadian, “Molecular dynamics simulation of pull-in phenomena in carbon nanotubes with Stone–Wales defects,” Solid State Communications. 2013. link Times cited: 34 USED (low confidence) Y. Sun, F. Ma, and K. Xu, “Size Dependent Mechanical Properties of Graphene Nanoribbons: Molecular Dynamics Simulation,” Materials Science Forum. 2013. link Times cited: 4 Abstract: Strain engineering is an effective method to tune the band g… read moreAbstract: Strain engineering is an effective method to tune the band gap and electronic transport properties of graphene nanoribbons (GNRs). However, strain/stress field may promote the system deviating from the equilibrium state, and the mechanical stability will become one of the key issues for reliable services of relevant devices. In this paper, the size-dependent mechanical properties of GNRs under tensile loading were studied by Molecular Dynamics (MD) simulations. The results indicate that the yield stress of both zigzag and armchair GNRs decreases with the ribbon length changing from 240 Å to 30 Å. However, the ductility of armchair GNRs was significantly improved. Radial Distribution Function (RDF) was employed to analyze the evolution of atomic configurations. It showed that lattice shearing is the main mechanism for the ductility of armchair GNRs. read less USED (low confidence) P. Kennedy and B. Garrison, “Chemical damage resulting from 15 keV C60, Ar18 and Ar60 cluster bombardments of solid benzene,” Surface and Interface Analysis. 2013. link Times cited: 7 Abstract: Molecular dynamics simulations of 15 keV normal incidence cl… read moreAbstract: Molecular dynamics simulations of 15 keV normal incidence cluster bombardment of solid benzene with Ar18, Ar60 and C60 were run for 50 ps using a mixed resolution model with the goal of elucidating the differences in chemical damage created in the crystal solid. The chemical damage in the solid for a single trajectory was found to be minor for all three clusters when compared with the total sputter yields; the largest number of damaged molecular benzene equivalents was only 28 ± 3 for Ar18 just two percent of the total sputter yield. All three clusters had relatively the same topography of chemical damage remaining in the crystalline solid. The damage was confined to the near surface region of the crystal with the overwhelming majority of damage confined to the crater created by the cluster impact. The chemical damage was also found to be approximately uniformly and randomly distributed around the crater. These findings demonstrate that for cluster bombardment of a small organic solid similar to molecular benzene, the total chemical damage remaining in the surface and the topography of the damage would be similar for Ar18, Ar60 and C60. Copyright © 2012 John Wiley & Sons, Ltd. read less USED (low confidence) L. Huang, Q. Han, and Y. Liang, “CALIBRATION OF NONLOCAL SCALE EFFECT PARAMETER FOR BENDING SINGLE-LAYERED GRAPHENE SHEET UNDER MOLECULAR DYNAMICS,” NANO. 2012. link Times cited: 44 Abstract: In this article, the small scale effect parameter e0 of sing… read moreAbstract: In this article, the small scale effect parameter e0 of single-layered graphene sheets (SLGSs) is calibrated for the bending problem. Taking the SLGSs as a rectangular plate, the normal displacemen... read less USED (low confidence) Z. Ye, C. Tang, Y. Dong, and A. Martini, “Role of Wrinkle Height in Friction Variation with Number of Graphene Layers,” Journal of Applied Physics. 2012. link Times cited: 111 Abstract: Molecular dynamics simulations are performed to study the fr… read moreAbstract: Molecular dynamics simulations are performed to study the frictional behavior of graphene. It is found that the friction between a diamond tip and graphene decreases with increasing number of graphene layers. This behavior is also affected by the graphene sheet size; specifically, the effect of the number of layers on friction becomes significant only when the modeled graphene sheets exceed a critical length. We further show that the frictional behavior can be directly correlated to the height of near-contact wrinkles that resist sliding. These observations are rationalized in terms of the ability of multiple sheets to act as a single material as they resist wrinkle formation. read less USED (low confidence) Y. Zhang, Q. Pei, and C. Wang, “A molecular dynamics investigation on thermal conductivity of graphynes,” Computational Materials Science. 2012. link Times cited: 83 USED (low confidence) M.-Y. Lin et al., “Low-temperature grown graphene films by using molecular beam epitaxy,” Applied Physics Letters. 2012. link Times cited: 27 Abstract: Complete graphene film is prepared by depositing carbon atom… read moreAbstract: Complete graphene film is prepared by depositing carbon atoms directly on Cu foils in a molecular beam epitaxy chamber at 300 °C. The Raman spectrum of the film has indicated that high-quality few-layer graphene is obtained. With back-gated transistor architecture, the characteristic current modulation of graphene transistors is observed. Following the similar growth procedure, graphitization is observed at room temperature, which is consistent with the molecular dynamics simulations of graphene growth. read less USED (low confidence) Y. Ni, Y. Chalopin, and S. Volz, “Calculation of inter-plane thermal resistance of few-layer graphene from equilibrium molecular dynamics simulations,” Journal of Physics: Conference Series. 2012. link Times cited: 13 Abstract: Inter-plane thermal resistance in 5-layer graphene is calcul… read moreAbstract: Inter-plane thermal resistance in 5-layer graphene is calculated from equilibrium molecular dynamics (EMD) by calculating the autocorrelation function of temperature difference. Our simulated inter-plane resistance for 5-layer graphene is 4.83 × 10−9 m2K/W. This data is in the same order of magnitude with the reported values from NEMD simulations and Debye model calculations, and the possible reasons for the slight differences are discussed in details. The inter-plane resistance is not dependent on temperature, according to the results of the EMD simulation. Phonon density of states (DOSs) were plotted to better understand the mechanism behind the obtained values. These results provide a better insight in the heat transfer across a few layer graphene and yield useful information on the design of graphene based thermal materials. read less USED (low confidence) J. Park and V. Prakash, “Thermal transport in 3D pillared SWCNT–graphene nanostructures,” Journal of Materials Research. 2012. link Times cited: 33 Abstract: We present results of a molecular dynamics study using adapt… read moreAbstract: We present results of a molecular dynamics study using adaptive intermolecular reactive empirical bond order interatomic potential to analyze thermal transport in three-dimensional pillared single-walled carbon nanotube (SWCNT)–graphene superstructures comprised of unit cells with graphene floors and SWCNT pillars. The results indicate that in-plane as well as out-of-plane thermal conductivity in these superstructures can be tuned by varying the interpillar distance and/or the pillar height. The simulations also provide information on thermal interfacial resistance at the graphene–SWCNT junctions in both the in-plane and out-of-plane directions. Among the superstructures analyzed, the highest effective (based on the unit cell cross-sectional area) in-plane thermal conductivity was 40 W/(m K) with an out-of-plane thermal conductivity of 1.0 W/(m K) for unit cells with an interpillar distance D _x = 3.3 nm and pillar height D _z = 1.2 nm, while the highest out-of-plane thermal conductivity was 6.8 W/(m K) with an in-plane thermal conductivity of 6.4 W/(m K) with D _x = 2.1 nm and D _z= 4.2 nm. read less USED (low confidence) M. Bifano, J. Park, and V. Prakash, “Sensitivity of Thermal Conductivity of Carbon Nanotubes to Defect Concentrations and Heat-Treatment.” 2012. link Times cited: 46 Abstract: In the present study, classical MD simulations using reverse… read moreAbstract: In the present study, classical MD simulations using reverse non-equilibrium molecular dynamics with the AIREBO interatomic potential are used to investigate the sensitivity of thermal conductivity in SWCNTs to side-wall defect concentration and heat-treatment. Two types of defects are investigated. First, the thermal conductivity of (6,6) SWCNTs is obtained as a function of concentration of chemisorbed hydrogen adatoms. Secondly, the thermal conductivity is obtained as a function of point-vacancy concentrations. The results of the studies show that 2 atom% of hydrogenation and 1.5–2% vacancy concentrations have very similar detrimental effects on the thermal conductivity of SWCNT. Vacancy repair is evident with heat treatment, and heat-treatments at 3000°C for up to 22 ns are found to transform point vacancies into various types of non-hexagonal side-wall defects; this vacancy repair is accompanied by a ca. 10% increase in thermal conductivity. Thermal conductivity measurements in both heat-treated and non-heat treated chemical vapor deposition grown MWCNTs are also reviewed. The results suggest that CNT thermal conductivity can be drastically increased if measures are taken to remove common defects from the SWCNT side-walls.Copyright © 2012 by ASME read less USED (low confidence) K. Farah, M. Langeloth, M. Böhm, and F. Müller-Plathe, “Surface-Induced Interphases During Curing Processes Between Bi- and Pentafunctional Components: Reactive Coarse-Grained Molecular Dynamics Simulations,” The Journal of Adhesion. 2012. link Times cited: 7 Abstract: The present reactive molecular dynamics (RMD) simulations di… read moreAbstract: The present reactive molecular dynamics (RMD) simulations discuss the formation of interphase regions in cured polymer adhesives. The latter are obtained from the curing of reactive liquid mixtures composed of pentafunctional linkers and bifunctional monomers in contact with idealized surfaces. The present reactive scheme mimics the one of epoxies with amine linkers, i.e., processes investigated experimentally by Possart and co-workers. Generic RMD simulations are performed in a coarse-grained (CG) resolution to evaluate basic principles in curing characterized by preferential interactions. The creation of linker-rich domains is promoted by preferential surface-linker as well as linker-linker interactions in the reactive mixtures. The dimension of the interphase both in the starting mixture and the cured network depends on these preferential interactions which lead to a retardation of the curing velocity. This retardation behavior is mapped by conversion curves as a function of the number of reactive steps and by the spatially resolved profiles of the connected linkers. Although derived by generic potentials, the simulated reduction of the curing velocity is in agreement with experimental results in epoxies. The chosen interactions also imply a smaller number of linker bonds in the interphase than in the bulk region. The present RMD approach offers insight into key parameters of curing processes under the influence of preferential surface interactions coupled to selective attractions in the liquid starting mixture. read less USED (low confidence) T. Ng, J. Yeo, and Z. Liu, “A molecular dynamics study of the thermal conductivity of graphene nanoribbons containing dispersed Stone–Thrower–Wales defects,” Carbon. 2012. link Times cited: 155 USED (low confidence) M. Joe, M. Moon, and K.-R. Lee, “Atomistic simulations of diamond-like carbon growth,” Thin Solid Films. 2012. link Times cited: 12 USED (low confidence) T. Panczyk, W. Rudziński, and A. Jagusiak, “Adsorption of colloid nanoparticles on carbon nanotubes studied by means of molecular dynamics simulations,” Colloids and Surfaces A: Physicochemical and Engineering Aspects. 2012. link Times cited: 11 USED (low confidence) E. Sandoz-Rosado, O. A. Tertuliano, and E. Terrell, “An atomistic study of the abrasive wear and failure of graphene sheets when used as a solid lubricant and a comparison to diamond-like-carbon coatings,” Carbon. 2012. link Times cited: 85 USED (low confidence) B.-H. Kim, K.-R. Lee, Y.-C. Chung, and J.-G. Lee, “Effects of interfacial bonding in the Si-carbon nanotube nanocomposite: A molecular dynamics approach,” Journal of Applied Physics. 2012. link Times cited: 11 Abstract: We investigated the effects of interfacial bonding on the me… read moreAbstract: We investigated the effects of interfacial bonding on the mechanical properties in the Si-carbon nanotube (CNT) nanocomposite by a molecular dynamics approach. To describe the system appropriately, we used a hybrid potential that includes Tersoff, AIREBO (adaptive intermolecular reactive empirical bond order), and Lennard–Jones potentials. With increasing bonding strength at the interface of Si matrix and CNT, toughness as well as Young’s modulus and maximum strength increased steadily. CNT pull-out and load transfer on the strong CNT were identified as the main mechanisms for the enhanced properties. At optimum bonding, crack tip was deflected around CNT and the fracture proceeded in plastic mode through Si matrix owing to the strong reinforcement of CNT, and resulted in a further enhancement of toughness. At maximum bonding, however, only load transfer is operative and the fracture returned to brittle mode. We concluded that a strong interface as long as the CNT maintains its structural integrity is des... read less USED (low confidence) J. Fowlkes, S. Horton, M. Fuentes-Cabrera, and P. Rack, “Signatures of the Rayleigh-plateau instability revealed by imposing synthetic perturbations on nanometer-sized liquid metals on substrates.,” Angewandte Chemie. 2012. link Times cited: 20 Abstract: Fluid jets destabilize into droplets according to the well k… read moreAbstract: Fluid jets destabilize into droplets according to the well known Rayleigh Plateau (RP) instability. The applicability of the RP model to a nanoscale liquid metal supported on a substrate (a so called rivulet) was investigated using molecular dynamics (MD) simulations as it has important implications for nanoscale materials assembly. Stochastic fluctuations were found to affect rivulet stability and dynamics when compared with microscopic predictions of rivulet break up; here a broad and delayed distribution of break up times was observed. Yet, hallmark characteristics of the RP theory were observed; (1) a critical wavelength demarcating stability, (2) stable and unstable growth modes and (3) neck formation induced by axial pressure gradients. Notably, MD simulations implementing synthetic perturbations, yielded significantly reduced dispersion in the final nanodroplet spacing and clearly revealed the underlying physics driving rivulet break up. read less USED (low confidence) Y. Zhang, Q. Pei, and C. Wang, “Mechanical properties of graphynes under tension: A molecular dynamics study,” Applied Physics Letters. 2012. link Times cited: 248 Abstract: Graphyne is the allotrope of graphene. In this letter, four … read moreAbstract: Graphyne is the allotrope of graphene. In this letter, four different graphynes (α, β, γ, and 6,6,12-graphenes) are investigated by molecular dynamics simulations to explore their mechanical properties and failure mechanisms. It is found that the presence of the acetylenic linkages in graphynes leads to a significant reduction in fracture stress and Young’s modulus with the degree of reduction being proportional to the percentage of the linkages. This deterioration in mechanical properties stems from the low atom density in graphynes and weak single bonds in the acetylenic linkages where the facture is initiated. read less USED (low confidence) H. Rouhi and R. Ansari, “NONLOCAL ANALYTICAL FLUGGE SHELL MODEL FOR AXIAL BUCKLING OF DOUBLE-WALLED CARBON NANOTUBES WITH DIFFERENT END CONDITIONS,” NANO. 2012. link Times cited: 39 Abstract: In this paper, a nonlocal Flugge shell model is utilized to … read moreAbstract: In this paper, a nonlocal Flugge shell model is utilized to investigate the axial buckling behavior of double-walled carbon nanotubes (DWCNTs) under various boundary conditions. According to the nonlocal elasticity theory, the displacement field equations coupled by the van der Waals interaction are derived. The set of governing equations of motion is then solved by the Rayleigh–Ritz method. The present analysis can treat boundary conditions in a layer-wise manner. The effects of nonlocal parameter, layer-wise boundary conditions and geometrical parameters on the mechanical behavior of DWCNTs are examined. Furthermore, molecular dynamics simulations are performed to assess the validity of the results and also to predict the appropriate values of nonlocal parameter. It is found that the type of boundary conditions affects the proper value of nonlocal parameter. read less USED (low confidence) H. Liao, F. Zhu, W. Zhang, Y. Chen, S. Song, and S. Liu, “Torsion behavior simulation of Ni-coating SWCNT based on molecular dynamics.” 2012. link Times cited: 1 Abstract: The effect of nickel coating upon the torsional behaviors of… read moreAbstract: The effect of nickel coating upon the torsional behaviors of single-walled carbon nanotube (SWCNT) was defined, and torsion behaviors were investigated using the molecular dynamics (MD) simulation method. In this work, an armchair (6,6) carbon nanotube was considered. Both SWCNT and SCNT coating Ni (SWCNT-Ni) were analyzed at 0K and 300K. By simulating torsion process of SWCNT-Ni, mechanical behaviors of SWCNT-Ni could be defined. When torsion rate was relatively high, it had been reported that the torsional stiffness of SWCNT would reduce even at low temperature. However, to avoid the effect of torsion rate upon mechanical behaviors of SWCNT and SWCNT-Ni, an extremely low torque was applied which was corresponding to low torsion rate, and it was observed that the torsion angle of SWCNT and SWCNT-Ni were almost the same at the initial stage. That was to say, the metal coated atoms had little effect on torsional stiffness at extremely low torsion rate. When temperature rises, the effect of temperature begun to emerge. It was noted that the nickel atoms trended to rearrange, and the nickel atoms were more likely to migrate to the place of great deformation, and the torsion changed the curve of the outside surface, which caused the increase of Ni-C interactions. read less USED (low confidence) T.-H. Liu, C. Pao, and C.-C. Chang, “Effects of dislocation densities and distributions on graphene grain boundary failure strengths from atomistic simulations,” Carbon. 2012. link Times cited: 85 USED (low confidence) R. D. Firouz-Abadi, H. Amini, and A. Hosseinian, “Assessment of the resonance frequency of cantilever carbon nanocones using molecular dynamics simulation,” Applied Physics Letters. 2012. link Times cited: 18 Abstract: The resonance frequencies of cantilever carbon nanocones (CN… read moreAbstract: The resonance frequencies of cantilever carbon nanocones (CNCs) up to 4 nm in height are determined using molecular dynamics simulation based on adaptive intermolecular reactive empirical bond order potential. The frequency content of the free vibrations of CNCs under a lateral initial excitation at the tip is analyzed using fast Fourier transformation, and the resonance frequencies are obtained. The results are reported for various samples to investigate the dependency of the resonance frequency to the geometrical parameters and temperature of CNCs. read less USED (low confidence) R. Ansari and S. Sahmani, “Small scale effect on vibrational response of single-walled carbon nanotubes with different boundary conditions based on nonlocal beam models,” Communications in Nonlinear Science and Numerical Simulation. 2012. link Times cited: 180 USED (low confidence) Y. K. Shen and H. Wu, “Interlayer shear effect on multilayer graphene subjected to bending,” Applied Physics Letters. 2012. link Times cited: 101 Abstract: The effect of interlayer shear on bending property of multi-… read moreAbstract: The effect of interlayer shear on bending property of multi-layer graphene is investigated using molecular dynamics simulations. Interlayer shear modulus is three orders lower than in-plane Young’s modulus, thus the bending behavior is dominated by interlayer shear. Continuum theory and atomistic simulations show that bending rigidity is proportional to layer number when the layer number exceeds 5. The small difference of these two proportional constants results from the stacking pattern, and turbostratic stacking decreases the interlayer shear modulus. For layer number smaller than 4, intrinsic ripples also play an important role and further decrease the interlayer shear modulus. read less USED (low confidence) A. Kyani and M. Diudea, “Molecular dynamics simulation study of the diamond D5 substructures,” Central European Journal of Chemistry. 2012. link Times cited: 7 Abstract: AbstractDiamond D5 is the name proposed by Diudea for hyper-… read moreAbstract: AbstractDiamond D5 is the name proposed by Diudea for hyper-diamonds having their rings mostly pentagonal. Within D5, in crystallographic terms: the mtn structure, known in clathrates of type II, several substructures can be defined. In the present work, the structural stability of such intermediates/fragments appearing in the construction/destruction of D5 net was investigated using molecular dynamics simulation. Calculations were performed using an empirical many-body potential energy function for hydrocarbons. It has been found that, at normal temperature, the hexagonal hyper-rings are more stable while at higher temperature, the pentagonal ones are relatively more resistant against heat treatment.
read less USED (low confidence) L. Xu, T. Ma, Y.-zhong Hu, and H. Wang, “Molecular dynamics simulation of the interlayer sliding behavior in few-layer graphene,” Carbon. 2012. link Times cited: 55 USED (low confidence) E. Bucholz, S. Phillpot, and S. Sinnott, “Molecular dynamics investigation of the lubrication mechanism of carbon nano-onions,” Computational Materials Science. 2012. link Times cited: 43 USED (low confidence) K. Gordiz, S. M. V. Allaei, and F. Kowsary, “Thermal rectification in multi-walled carbon nanotubes: A molecular dynamics study,” Applied Physics Letters. 2011. link Times cited: 41 Abstract: Using nonequilibrium molecular dynamics simulations, we show… read moreAbstract: Using nonequilibrium molecular dynamics simulations, we show if a multi-walled carbon nanotube (MWNT) is heated asymmetrically, an evident thermal rectification can be detected. We attribute the observed rectification to the asymmetric radial thermal transport between constructing layers in MWNT. The underlying physics is explained by calculating temperature distribution of MWNT layers and phonon power spectrum. Thermal rectification in this carbon nanotube based thermal rectifier does not diminish by increasing the system size, and exists in a wide range of temperatures. These results open a door in the applicability of MWNTs in nanoscale engineering of thermal transport devices. read less USED (low confidence) D. Delgado and R. Vila, “Statistical Molecular Dynamics study of displacement energies in diamond,” Journal of Nuclear Materials. 2011. link Times cited: 16 USED (low confidence) A. Dunn and D. Duffy, “A molecular dynamics study of diamond and graphite under tritium bombardment,” Journal of Applied Physics. 2011. link Times cited: 8 Abstract: Carbon has proven to be a promising plasma facing material i… read moreAbstract: Carbon has proven to be a promising plasma facing material in tokamak reactors because of its high thermal conductivity and limited radiative cooling as a plasma contaminant. It is used in a range of forms, mostly graphitic or amorphous. Diamond, however, has superior thermal properties to other forms of carbon but has been largely overlooked due to fears of graphitisation. Tritium retention is, perhaps, the major disadvantage of using carbon as a plasma facing material in a deuterium-tritium fusion reactor. Here, we use molecular dynamics to study the relative performance of diamond and graphite on exposure to tritium bombardment. We model the cumulative bombarded of diamond and graphitic surfaces with a high flux (1029 m−2 s−1) of low energy 15 eV tritium atoms. This was done for substrate temperatures in the range 300–2100 K. Below temperatures of graphitisation (∼1000 K) the diamondstructure confined tritium to the upper surface, this inhibited further structural damage and resulted in lower total retention. The graphitic surface allowed for deeper tritium penetration and therefore greater retention. These results corroborate with recent experimental evidence. read less USED (low confidence) A. Udupa and A. Martini, “Model predictions of shear strain-induced ridge defects in graphene,” Carbon. 2011. link Times cited: 13 USED (low confidence) G. Balasubramanian, I. Puri, M. Böhm, and F. Leroy, “Thermal conductivity reduction through isotope substitution in nanomaterials: predictions from an analytical classical model and nonequilibrium molecular dynamics simulations.,” Nanoscale. 2011. link Times cited: 56 Abstract: We introduce an analytical model to rapidly determine the th… read moreAbstract: We introduce an analytical model to rapidly determine the thermal conductivity reduction due to mass disorder in nanomaterials. Although this simplified classical model depends only on the masses of the different atoms, it adequately describes the changes in thermal transport as the concentrations of these atoms vary. Its predictions compare satisfactorily with nonequilibrium molecular dynamics simulations of the thermal conductivity of (14)C-(12)C carbon nanotubes as well as with previous simulations of other materials. We present it as a simple tool to quantitatively estimate the thermal conductivity decrease that is induced by isotope substitution in various materials. read less USED (low confidence) R. Ansari, H. Rouhi, and S. Sahmani, “Calibration of the analytical nonlocal shell model for vibrations of double-walled carbon nanotubes with arbitrary boundary conditions using molecular dynamics,” International Journal of Mechanical Sciences. 2011. link Times cited: 174 USED (low confidence) O. Yermolenko, G. V. Kornich, and G. Betz, “Molecular dynamics simulations of low-energy argon ion sputtering of copper clusters on polyethylene surfaces,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2011. link Times cited: 1 USED (low confidence) Q. Lu, W. Gao, and R. Huang, “Atomistic simulation and continuum modeling of graphene nanoribbons under uniaxial tension,” Modelling and Simulation in Materials Science and Engineering. 2011. link Times cited: 146 Abstract: Atomistic simulations are performed to study the nonlinear m… read moreAbstract: Atomistic simulations are performed to study the nonlinear mechanical behavior of graphene nanoribbons under quasistatic uniaxial tension, emphasizing the effects of edge structures (armchair and zigzag, without and with hydrogen passivation) on elastic modulus and fracture strength. The numerical results are analyzed within a theoretical model of thermodynamics, which enables determination of the bulk strain energy density, the edge energy density and the hydrogen adsorption energy density as nonlinear functions of the applied strain based on static molecular mechanics simulations. These functions can be used to describe mechanical behavior of graphene nanoribbons from the initial linear elasticity to fracture. It is found that the initial Young's modulus of a graphene nanoribbon depends on the ribbon width and the edge chirality. Furthermore, it is found that the nominal strain to fracture is considerably lower for graphene nanoribbons with armchair edges than for ribbons with zigzag edges. Molecular dynamics simulations reveal two distinct fracture nucleation mechanisms: homogeneous nucleation for the zigzag-edged graphene nanoribbons and edge-controlled heterogeneous nucleation for the armchair-edged ribbons. The modeling and simulations in this study highlight the atomistic mechanisms for the nonlinear mechanical behavior of graphene nanoribbons with the edge effects, which is potentially important for developing integrated graphene-based devices. read less USED (low confidence) J. Kotakoski and A. Krasheninnikov, “Chapter 11:Native and Irradiation-Induced Defects in Graphene: What Can We Learn from Atomistic Simulations?” 2011. link Times cited: 5 Abstract: Defects in graphene, a recently discovered one-atom-thick ma… read moreAbstract: Defects in graphene, a recently discovered one-atom-thick material with exceptional characteristics, may considerably alter its properties and have negative effects on the operation of graphene-based electronic devices. Defects, when deliberately created by ion and especially electron irradiation with a high spatial resolution, may also have a beneficial effect on the target. Thus the complete understanding of the energetics and dynamics of defects in graphene is required for engineering the properties of graphene-based materials and devices. In this Chapter we give an overview of the recent progress in the understanding of the role of defects in these materials. We briefly dwell on the experimental data on native and irradiation-induced defects in graphene, and give detailed account of recent simulation results for point and line defects in graphene. We also discussed at length the mechanisms of defect formation under ion and electron irradiation as revealed by atomistic computer simulations. read less USED (low confidence) J. Guo, B. Wen, R. Melnik, S. Yao, and T. Li, “Molecular dynamics study on diamond nanowires mechanical properties: Strain rate, temperature and size dependent effects,” Diamond and Related Materials. 2011. link Times cited: 30 USED (low confidence) R. Ansari, S. Sahmani, and H. Rouhi, “Rayleigh–Ritz axial buckling analysis of single-walled carbon nanotubes with different boundary conditions,” Physics Letters A. 2011. link Times cited: 113 USED (low confidence) Q.-D. Wang, J. Wang, J.-Q. Li, N. Tan, and X. Li, “Reactive molecular dynamics simulation and chemical kinetic modeling of pyrolysis and combustion of n-dodecane,” Combustion and Flame. 2011. link Times cited: 173 USED (low confidence) K. Min and N. Aluru, “Mechanical properties of graphene under shear deformation,” Applied Physics Letters. 2011. link Times cited: 302 Abstract: In this letter, we investigate the mechanical properties of … read moreAbstract: In this letter, we investigate the mechanical properties of graphene under shear deformation. Specifically, using molecular dynamics simulations, we compute the shear modulus, shear fracture strength, and shear fracture strain of zigzag and armchair graphene structures at various temperatures. To predict shear strength and fracture shear strain, we also present an analytical theory based on the kinetic analysis. We show that wrinkling behavior of graphene under shear deformation can be significant. We compute the amplitude to wavelength ratio of wrinkles using molecular dynamics and compare it with existing theory. Our results indicate that graphene can be a promising mechanical material under shear deformation. read less USED (low confidence) Y. Sun, F. Ma, and K. Xu, “Molecular Dynamics Simulation on Tensile Deformation of Graphene with Nanomeshes,” Integrated Ferroelectrics. 2011. link Times cited: 2 Abstract: Nanomeshes, introduced into the graphene sheet, are a very e… read moreAbstract: Nanomeshes, introduced into the graphene sheet, are a very effective method to open up the band gap and thus to improve the electronic properties. In this paper, the deformation behaviors of graphene sheet with nanomeshes were simulated by Molecular Dynamics methods. It was found that the fracture stress and the corresponding strain depend on the radius of nanomeshes, which was further confirmed by analyzing the potential energy as well as radial distribution function. One intrinsic mechanism, based on the spatial configurations of carbon atoms, was suggested to reveal the distinct deformation behaviors. This will be helpful to design the next carbon-based materials in micro-electronic devices. read less USED (low confidence) L. Shen, H. S. Shen, and C.-li Zhang, “Temperature-dependent elastic properties of single layer graphene sheets,” Materials & Design. 2010. link Times cited: 123 USED (low confidence) N. Lümmen, “Aggregation of carbon in an atmosphere of molecular hydrogen investigated by ReaxFF-molecular dynamics simulations,” Computational Materials Science. 2010. link Times cited: 13 USED (low confidence) S. Stuart, M. Fallet, P. Krstic, and C. Reinhold, “Evolution of carbon surfaces under simulated bombardment by deuterium.” 2009. link Times cited: 6 Abstract: The bombardment of both graphite and deuterated amorphous ca… read moreAbstract: The bombardment of both graphite and deuterated amorphous carbon surfaces with 20 eV D atoms has been performed using molecular dynamics simulation. The primary purpose of these simulations is to determine whether the eventual state of the surface, once it has reached a steady state, is independent of the starting structure. It is found that while independently realized amorphous carbon structures give rise to similar impact-modified surfaces, the graphitic surface evolves towards a somewhat different structure. Including or neglecting a realistic treatment of the nonbonded interactions in the graphite bombardment does not result in large differences in the impact-modified structure, although the penetration depth is considerably less when nonbonded interactions are included. read less USED (low confidence) B. Shen and F. Sun, “Molecular dynamics investigation on the atomic-scale friction behaviors between copper(0 0 1) and diamond(1 1 1) surfaces,” Applied Surface Science. 2009. link Times cited: 10 USED (low confidence) B. Czerwinski, L. Rzeznik, R. Paruch, B. Garrison, and Z. Postawa, “Molecular dynamics computer simulations of 5 keV C60 bombardment of benzene crystal,” Vacuum. 2009. link Times cited: 10 USED (low confidence) A. Volkov, K. R. Simiov, and L. Zhigilei, “Mesoscopic simulation of self-assembly of carbon nanotubes into a network of bundles.” 2009. link Times cited: 12 Abstract: *† ‡ A computational approach for generation of network stru… read moreAbstract: *† ‡ A computational approach for generation of network structures of interconnected carbon nanotube (CNT) bundles, commonly observed in CNT-based materials, is developed and tested. The approach is based on a mesoscopic computational model designed for simulation of large systems of interacting CNTs. The model adopts a coarse-grained representation of a CNT as a sequence of stretchable cylindrical segments defined by a chain of nodes. The dynamic behavior of CNTs is reproduced with the help of a mesoscopic force field, by solving the equations of motion for the nodes. The mesoscopic force field accounts for stretching and bending of individual CNTs, as well as for the van der Waals interactions among the nanotubes. Simulations, performed for systems containing thousands of CNTs and having dimensions on the order of a micrometer, predict spontaneous self-assembly of CNTs into a continuous network of bundles. The structures produced in the simulations are qualitatively similar to the structures of CNT films and mats observed in experiments. read less USED (low confidence) K. Endo, C. Masumoto, D. Matsumoto, T. Ida, M. Mizuno, and N. Kato, “Fragment distribution of thermal decomposition for PS and PET with QMD calculations by considering the excited and charged model molecules,” Applied Surface Science. 2008. link Times cited: 5 USED (low confidence) B. Hehr, A. Hawari, and V. Gillette, “Molecular Dynamics Simulations of Graphite at High Temperatures,” Nuclear Technology. 2007. link Times cited: 11 Abstract: Graphite, a key structural and moderator material in the pro… read moreAbstract: Graphite, a key structural and moderator material in the proposed Generation IV roadmap, is expected to experience irradiation at temperatures up to 1800 K. In this study, a molecular dynamics (MD) code is developed for the purpose of performing atomistic simulations of high-temperature graphite. The MD computations are benchmarked against thermal expansion and mean-squared displacement data, and modifications to the potential energy function are devised as needed to fit experimental measurements. Graphite-specific alterations include a plane-by-plane center-of-mass velocity correction, anisotropy in the potential energy cutoff function, and temperature-dependent parameterization of the interatomic potential. The refined MD model is then employed to investigate the threshold displacement energy at temperatures of 300 and 1800 K. It was found that the threshold displacement energy depends strongly on the knock-on direction, yet the angle-averaged threshold energy exhibits relatively little variation with temperature. read less USED (low confidence) S. K. Pregler, T. Hayakawa, H. Yasumatsu, T. Kondow, and S. Sinnott, “Combined computational and experimental study of Ar beam induced defect formation in graphite,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2007. link Times cited: 27 USED (low confidence) V. Coluci, N. M. Pugno, S. Dantas, D. S. Galvão, and A. Jorio, “Atomistic simulations of the mechanical properties of ‘super’ carbon nanotubes,” Nanotechnology. 2007. link Times cited: 80 Abstract: The mechanical properties of the so-called ‘super’ carbon na… read moreAbstract: The mechanical properties of the so-called ‘super’ carbon nanotubes (STs) are investigated using classical molecular dynamics simulations. The STs are built from single-walled carbon nanotubes (SWCNTs) connected by Y-like junctions forming an ordered carbon nanotube network that is then rolled into a seamless cylinder. We observed that the ST behaviour under tensile tests is similar to the one presented by fishing nets. This interesting behaviour provides a way to vary the accessible channels to the inner parts of STs by applying an external mechanical load. The Young’s modulus is dependent on the ST chirality and it inversely varies with the ST radius. Smaller reduction of breaking strain values due to temperature increase is predicted for zigzag STs compared to SWCNTs. The results show that, for STs with radius ∼5 nm, the junctions between the constituent SWCNTs play an important role in the fracture process. The Young’s modulus and tensile strength were estimated for hierarchical higher-order STs using scaling laws related to the ST fractal dimension. The obtained mechanical properties suggest that STs may be used in the development of new porous, flexible, and high-strength materials. read less USED (low confidence) X.-F. Wang, Z. Xu, and Z. Zhu, “Reversible mechanical bistability of carbon nanotubes under radial compression,” Chemical Physics. 2007. link Times cited: 8 USED (low confidence) D. Schwen and E. Bringa, “Atomistic simulations of swift ion tracks in diamond and graphite,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2007. link Times cited: 40 USED (low confidence) V. Coluci, S. Dantas, A. Jorio, and D. S. Galvão, “Mechanical properties of carbon nanotube networks by molecular mechanics and impact molecular dynamics calculations,” Physical Review B. 2007. link Times cited: 50 Abstract: We report a theoretical investigation of the mechanical prop… read moreAbstract: We report a theoretical investigation of the mechanical properties of idealized networks formed by single-walled carbon nanotubes showing crossbar and hexagonal architectures. The study was performed by using molecular mechanics calculations and impact dynamics simulations based on bond-order empirical potential. The studied networks were predicted to have elasticity modulus of $\ensuremath{\sim}10--100\phantom{\rule{0.3em}{0ex}}\mathrm{GPa}$ and bulk modulus of $\ensuremath{\sim}10\phantom{\rule{0.3em}{0ex}}\mathrm{GPa}$. The results show a transition from high to moderate flexibility during the deformation stages. This behavior was associated with the existence of two deformation mechanisms presented by the network related to the nanotube stretching and junction bending processes. read less USED (low confidence) H. J. Liu and K. Cho, “A molecular dynamics study of round and flattened carbon nanotube structures,” Applied Physics Letters. 2004. link Times cited: 29 Abstract: Large diameter single wall carbon nanotubes exist with both … read moreAbstract: Large diameter single wall carbon nanotubes exist with both round right cylinder and barbell-like flattened cross sections. Using an adaptive intermolecular reactive bond order potential, we examine the characteristics of both configurations by using molecular dynamics simulations. We then continue to examine the dynamical transition from the flattened to round state by charge injection. Predictions based on these simulations provide a basis for the design of active fluid transport devices, and nanoscale mechanical systems/motors. read less USED (low confidence) C. Meserole, E. Vandeweert, Z. Postawa, Y. Dou, B. Garrison, and N. Winograd, “Desorption of silver atoms from benzene-covered Ag(111) by energetic Ar+ bombardment,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2001. link Times cited: 3 USED (low confidence) H. Zou, L. Yang, Z. Huang, Y. Dong, and R.-Y. Dong, “High thermal conductivity and ultralow friction of two-dimensional ice by molecular dynamics simulations,” International Journal of Heat and Mass Transfer. 2024. link Times cited: 0 USED (low confidence) M. Batyrow, K. Dericiler, B. A. Palabıyık, B. S. Okan, H. Öztürk, and I. Erucar, “Combining tensile test results with atomistic predictions of elastic modulus of graphene/polyamide-6,6 nanocomposites,” Materials Today Communications. 2023. link Times cited: 0 USED (low confidence) Z. Yang, R. Wang, H. Li, H.-K. Tang, and K. Han, “Phonon Thermal Transport in Polycrystalline Graphene:Effects of Grain, Vacancy and Strain,” SSRN Electronic Journal. 2023. link Times cited: 0 USED (low confidence) Q. Zheng, Z.-an Tian, T. Gao, Y.-chao Liang, Q. Chen, and Q. Xie, “Effect of graphene on solid–liquid coexistence in Cu nanodroplets,” Applied Surface Science. 2023. link Times cited: 0 USED (low confidence) Z. Bo-Jia, A. Min-Rong, H. Teng, and H. La, “The interaction mechanism of dislocation and amorphous phase: A Molecular Dynamics Simulation,” Acta Physica Sinica. 2022. link Times cited: 0 Abstract: As the lightest metal structural material, magnesium alloy i… read moreAbstract: As the lightest metal structural material, magnesium alloy is known as the “green engineering material” in the 21st century. Especially, crystalline-amorphous dual-phase nanostructure magnesium materials exhibit excellent mechanical properties, though the interaction mechanism between the dislocation in crystal and amorphous phase is still under the investigation. In present work, the interaction between the edge dislocation and amorphous phase in nanocrystalline magnesium under shear load is studied by using molecular dynamics simulation. The result indicates that the interaction mechanism between amorphous phase and dislocation shows the size dependence. Compared with the sample with smaller amorphous size, larger amorphous size will lead to a larger second strengthening effect. And the interaction mechanism between amorphous phase and dislocation is mainly attributed to the pinning effect of amorphous to the dislocation. For the samples with small amorphous size, the pinning effect of amorphous to the dislocation is limited and the pinning time is shorter. The interaction mechanism is mainly the dislocation bypassing amorphous phase. While for the samples with larger amorphous size, the pinning effect of amorphous to the dislocation is larger and the pinning time is relatively longer. The interaction is mainly the cross slip mechanism of dislocation caused by amorphous phase. The results obtained from this work have certain reference value and guiding significance for the design and preparation of high-performance Magnesium and its alloys. read less USED (low confidence) L. Qingyang, X. Qingsong, and L. Rui, “The influence of N-doping on friction behavior of graphene by molecular dynamics simulation,” Acta Physica Sinica. 2022. link Times cited: 0 Abstract: Graphene has attracted a lot of attention owing to its excel… read moreAbstract: Graphene has attracted a lot of attention owing to its excellent electrical properties, however, the gapless nature of graphene limits its further application. Doping is an effective way to open the bandgap, in which nitrogen-doped (N-doped) graphene has potential for application, but the study of its tribological properties is still lacking. In this paper, the effect of nitrogen doping on the tribological properties of graphene under different interfacial structures is investigated by molecular dynamics simulation. The simulation models include a hexagonal graphene sheet, graphene or N-doped graphene substrate. The results show that nitrogen doping has different effects on friction when interface structure is in commensurate and incommensurate state. In commensurate state, N-doping decreases friction between interfaces in all cases, and friction goes up at first and decreases with the increase of doping ratio of nitrogen. The local maximum value of friction occurs at doping ratio 7.5%. The reason causes this phenomena is interface structure and the change of van de Waals force between interfaces. The introduction of nitrogen atoms causes lattice distortion of graphene, which results in the formation of local incommensurate state, thus reduces the interfacial potential barrier and friction. However, the van der Waals force of nitrogen and carbon atoms between layers is stronger than that between carbon atoms and carbon atoms, which causes the increase of friction. When the doping ratio is low or high, lattice distortion plays more important role. Compared with ideal graphene, friction of N-doped graphene shows much smaller increase with load, which indicates better performance of N-doped graphene under high load. When the interface structure is in incommensurate state, the introduction of nitrogen atoms shows slight influence on lattice mismatch, therefore, the change of atomic type plays dominant role on friction between interfaces, which goes up following the increase of N-doping ratio. When the substrate is graphene with vacancy defects, the value of friction between interfaces is larger than ideal graphene or N-doped graphene, which indicates that the doping of nitrogen atoms has positive effect for reducing the friction of graphene with defects. read less USED (low confidence) X. Huang, J. Guo, and Y. Yue, “Graphene coated 3C-SiC with improved irradiation resistance and enhanced heat conduction property after collision cascade,” International Journal of Heat and Mass Transfer. 2022. link Times cited: 2 USED (low confidence) Z. Qiu et al., “Size effects of graphene sheets on the strengthening mechanism of Al-graphene composites: A molecular dynamics study,” Applied Surface Science. 2022. link Times cited: 11 USED (low confidence) Z. Zi-Xu and W. Lei, “Tensile properties and damage mechanism of diamondene with boundary cracks,” Acta Physica Sinica. 2022. link Times cited: 0 Abstract: Diamondene has captured the attention of scientists recently… read moreAbstract: Diamondene has captured the attention of scientists recently because of its brilliant physical properties. But, owing to the limitations of current technology, defects are indispensable during the production of diamondene. In this study, the effect of boundary cracks on the tensile properties and damage mechanism of diamondene is investigated by using molecular dynamics method. Results show that the crack leads to a substantial weakening of the tensile properties of diamondene, and the elastic modulus, cracking strain, and cracking stress of diamondene containing a boundary crack are less than those of diamondene without cracks. As for the failure mode, the damage of crack-free diamondene starts near the mobile end, while the damage of diamondene with a boundary crack starts at the crack tip. After reaching the cracking strain, the crack will form a penetration rupture without further loading and the crack-free diamondene completely lose its load-bearing capacity. However, in diamondene with a boundary crack, the load still needs to be applied and the crack will form a penetration crack after several extensions after reaching the cracking strain. Furthermore, the tensile properties of diamondene with a boundary crack has a strong dependency on temperature, and decrease significantly when the temperature increases. Changes in the location, length and direction of cracks can cause changes in the tensile properties and damage mechanisms of the crack-containing diamondene. read less USED (low confidence) L. Galiakhmetova, K. Krylova, and I. Kosarev, “Dislocation dipole movement in graphene at finite temperatures: Molecular dynamics study,” MATHEMATICS EDUCATION AND LEARNING. 2022. link Times cited: 0 USED (low confidence) M. Y. Zhou, J. Liu, and L. Q. Zhang, “Structure and properties of polymer/two-dimensional nanomaterials studied via molecular dynamics simulation: a review,” Molecular Systems Design & Engineering. 2022. link Times cited: 2 Abstract: The complicated effects of the 2D filler characteristics on … read moreAbstract: The complicated effects of the 2D filler characteristics on the mechanical, viscoelastic and thermal and electrical conductivity properties of polymer nanocomposites are summarized. read less USED (low confidence) B. Zhao, X. Yu, Y. Liu, L. Yang, Z. Zhang, and B. Zhang, “Frictional characteristics of heterostructure film composed of graphene and H-BN with the consideration of defects,” Tribology International. 2021. link Times cited: 9 USED (low confidence) H.-C. Chen, G. Zhang, Z. Lu, and L. Bai, “Frictional behaviors of diamond-like carbon films under water lubrication: A molecular dynamics study,” Tribology International. 2021. link Times cited: 30 USED (low confidence) S.-B. Fei and K. Aifantis, “Modelling dislocation-graphene interactions in a BCC Fe matrix by molecular dynamics simulations and gradient plasticity theory,” Applied Surface Science. 2021. link Times cited: 31 USED (low confidence) M. Yan, T. Li, P. Zheng, F.-hua Chen, Y. Jiang, and H. Li, “Coalescence of Al droplet impacting on a melt surface,” Results in physics. 2021. link Times cited: 2 USED (low confidence) N. Chand and M. Fahim, “Molecular dynamics simulation and tribological behavior of polymer composites.” 2021. link Times cited: 0 USED (low confidence) P. R. Patel, S. Sharma, and S. Tiwari, “Tribological Properties of Aluminium Reinforced with Differently Oriented Carbon Nanotube: A Molecular Dynamics Study,” Surface Topography: Metrology and Properties. 2021. link Times cited: 2 Abstract: Molecular dynamics (MD) simulations have been carried out to… read moreAbstract: Molecular dynamics (MD) simulations have been carried out to envisage the sliding friction response of single-wall carbon nanotube (SWCNT) reinforced aluminum (Al) nanocomposites and pure Al. The simulations have been performed with different sliding velocities (0.02–0.11 Å ps−1) using the three-layer model. The effect of carbon nanotube (CNT) reinforcement, CNT orientation, and sliding velocities on the coefficient of friction (COF), abrasion rate, and mean square displacement (MSD) have been predicted. The reinforcement of CNT decreased the COF to 0.06 by 45% and the lowest abrasion rate of 0.093%. The reinforcement of CNT in Al parallel to the sliding direction of the Fe rod indenter was found to be more effective for improvement in the tribological properties as compared to perpendicularly reinforced CNT. The increase in sliding velocity of the indenter increased the COF from 0.06 to 0.08 and decreased the abrasion rate from 0.172% to 0.094% for CNT-Al nanocomposites. The ANOVA at the 95% level of confidence revealed that the effect of sliding velocities (0.02–0.11 Å ps−1) of indenter was found to be insignificant for the variation in COF and significant for variation of abrasion rate while the type of reinforcement was found to be significant for both COF as well as for the abrasion rate. The MSD revealed the higher migration of Al atoms from the surface of nanocomposites at higher sliding velocity. read less USED (low confidence) P. N. Babu and S. Pal, “Molecular Dynamics Simulation-Based Investigation of Mechanical Behavior of CNT Embedded Nanocrystalline Al at Cryogenic Temperature,” Springer Proceedings in Materials. 2021. link Times cited: 0 USED (low confidence) K. K. Gupta, A. Roy, and S. Dey, “Comparative Study of Various Defects in Monolayer Graphene Using Molecular Dynamics Simulation.” 2020. link Times cited: 3 USED (low confidence) B. Faria, N. Silvestre, and J. Lopes, “Strength and fracture of graphyne and graphdiyne nanotubes,” Computational Materials Science. 2020. link Times cited: 21 USED (low confidence) A. K. Balerba et al., “Graphene nano-flakes on Cu low-index surfaces by density functional theory and molecular dynamics simulations.” 2020. link Times cited: 2 USED (low confidence) Y. Wang, J. Cao, J. Chai, and J. Shi, “Geometric effects on self-assemble of a BP ribbon on a CNT,” Computational Materials Science. 2020. link Times cited: 0 USED (low confidence) T. Mattsson, K. Cochrane, J. Lane, and S. Root, “Simulations of Hydrocarbon Polymers Related to Compression Experiments on Sandia’s Z Machine,” Computational Approaches for Chemistry Under Extreme Conditions. 2019. link Times cited: 2 USED (low confidence) X.-Y. Sun, H. Liu, and S. Ju, “Dependence of wrinkling geometric patterns on the chirality of monolayer graphene under shear deformation,” Physica E: Low-dimensional Systems and Nanostructures. 2019. link Times cited: 2 USED (low confidence) J. Fan, D. Rong, Z. Zhou, C. Xu, and X. Xu, “Exact solutions for forced vibration of completely free orthotropic rectangular nanoplates resting on viscoelastic foundation,” European Journal of Mechanics - A/Solids. 2019. link Times cited: 16 USED (low confidence) A. Nikonov, “Construction of response functions of Cu, Fe and C mesoparticles in MCA method based on molecular dynamics calculations,” PROCEEDINGS OF THE INTERNATIONAL CONFERENCE ON ADVANCED MATERIALS WITH HIERARCHICAL STRUCTURE FOR NEW TECHNOLOGIES AND RELIABLE STRUCTURES 2019. 2019. link Times cited: 1 USED (low confidence) X. Liu, “Buckling of Graphene Monolayer Under In-Plane Compression,” Springer Theses. 2019. link Times cited: 0 USED (low confidence) S. Dong, C. Zhu, Y. Chen, and J. Zhao, “Buckling behaviors of metal nanowires encapsulating carbon nanotubes by considering surface/interface effects from a refined beam model,” Carbon. 2019. link Times cited: 21 USED (low confidence) A. Shemukhin, A. Nazarov, and A. Stepanov, “LAMMPS Code Simulation of the Defect Formation Induced by Ion Incidence in Carbon Nanotubes,” Supercomput. Front. Innov. 2019. link Times cited: 2 Abstract: A molecular dynamic calculation of the multi-walled carbon n… read moreAbstract: A molecular dynamic calculation of the multi-walled carbon nanotube thermal sputtering induced by ion irradiation is carried out. Sputtering results comparable to experimental data are obtained. There are two models of ion and thermal sputtering discussed in the paper. The simulation tested the model of thermal amorphization and revealed that the disordering of multi-walled carbon nanotubes structure occurs as a result of their heating under ion irradiation. Classical molecular dynamic simulation was performed using LAMMPS code. Simulation cell with 14 layers multi-walled carbon nanotube 12 × 12 × 30 nm size contains 285600 atoms. Multi-walled carbon nanotube was irradiated by 80 keV energy Ar ions in cumulative mode. Simulation was performed on the Lomonosov-1 supercomputer. About 24600 nodes-hours were spent on one simulation as a whole. The balancing of MPI flows for a spatial grid of counting nodes occurred according to the scheme 8 × 8 × 128 MPI-stream. LAMMPS code was built with Intel 12.0 compiler. This configuration allowed to speed up the calculation in comparison with the calculation on a single-processor Xeon CPU X5570 2.93 GHz machine by 60 times. read less USED (low confidence) F. Pan, G. Wang, L. Liu, Y. Chen, Z. Zhang, and X. Shi, “Bending induced interlayer shearing, rippling and kink buckling of multilayered graphene sheets,” Journal of the Mechanics and Physics of Solids. 2019. link Times cited: 50 USED (low confidence) G. Galiullina, N. Orekhov, and V. Stegailov, “Nanostructures nucleation in carbon–metal gaseous phase: A molecular dynamics study,” Journal of Physics: Conference Series. 2018. link Times cited: 3 Abstract: We perform nonequilibrium molecular dynamics simulation of c… read moreAbstract: We perform nonequilibrium molecular dynamics simulation of carbon nanoclusters nucleation and early stages of growth from the gaseous phase. We analyze the catalytic effect of iron atoms on the nucleation kinetics and structure of the resultant nanoparticles. Reactive Force Field (ReaxFF) is used in the simulations for the description of bond formation and dissociation during the nucleation process at the nanoscale. The catalytic effect of iron reveals itself even on nanosecond simulation times: iron atoms accelerate the process of clustering but result in less graphitized carbon structures. read less USED (low confidence) V. Dozhdikov, A. Basharin, and P. Levashov, “Structure of amorphous carbon quenched from liquid in the pressure range 1–40 GPa: Molecular dynamic modeling,” Journal of Physics: Conference Series. 2018. link Times cited: 2 Abstract: It is well known, that quenching from the liquid state is th… read moreAbstract: It is well known, that quenching from the liquid state is the basis of many methods for creating new materials with unique properties. Liquid and amorphous carbon are a mixture of atoms with different states of hybridization (sp1, sp2, sp3) owing to polymorphism. It is claimed that there is a tendency of growth of sp1 atoms in liquid and amorphous carbon at decreasing pressure. Great interest has been shown recently to carbyne and pseudocarbynes, consisting of sp1-hybridizing atoms. These materials have unique optical and mechanical properties. In the present work a pressure dependence of the structure of amorphous carbon, quenched from liquid is studied by molecular dynamics simulation in the pressure range 1–40 GPa. The interaction between carbon atoms was determined by two bond-order potentials: Airebo and ReaxFF. These two potentials take into account the type of a chemical bond as well as breaking and formation of new chemical bonds during the modeling process. We study a bulk quenching from liquid carbon in the NPT ensemble at a constant pressure and determine the distribution of chemical bonds sp1–sp2–sp3 in amorphous carbon during the quenching. Quenched liquid structure modeling at a pressure of 1 GPa and the structure of an amorphous carbon sample obtained experimentally at a pressure of 25 MPa by Raman spectroscopy showed that the sp1 fraction of carbon was significant. read less USED (low confidence) J. Baimova, L. Rysaeva, and A. Rudskoy, “Deformation behavior of diamond-like phases: Molecular dynamics simulation,” Diamond and Related Materials. 2018. link Times cited: 25 USED (low confidence) M.-T. Lin, X. Sun, W. Xie, and Z. Zhang, “Load-transfer and failure behaviors of crosslinked interfaces in collagen-mimic carbon nanotube bundles,” International Journal of Mechanical Sciences. 2018. link Times cited: 7 USED (low confidence) G. Rajasekaran and A. Parashar, “Effect of topological defects on mechanical properties of graphene sheets: a molecular dynamics study,” Materials Today: Proceedings. 2018. link Times cited: 7 USED (low confidence) H. Ghasemi and A. Rajabpour, “Thermal expansion coefficient of graphene using molecular dynamics simulation: A comparative study on potential functions,” Journal of Physics: Conference Series. 2017. link Times cited: 17 Abstract: In this paper, we studied the thermal expansion coefficient … read moreAbstract: In this paper, we studied the thermal expansion coefficient (TEC) of pristine graphene sheets (GSs) using molecular dynamics (MD) simulation. We validated our model with previous studies employing AIREBO potential function and repeated the same simulation with the optimized Tersoff potential function. We also discussed the differences of the results and the corresponding reasons: evaluating the negative TEC of graphene by measuring the C-C bond length and out-of-plane vibrations of the GS. We finally showed that the ripples and wrinkles are more represented over the GS during the simulation with the AIREBO potential function rather than the optimized Tersoff. Comparing the results of both potential functions; it is seen that the results obtained by AIREBO potential function are in better agreement with those reported by previous scholars. read less USED (low confidence) S. Wang, Z. Fan, Y. Cui, S. Zhang, B.-cheng Yang, and H. Chen, “Fracture behaviors of brittle and ductile 2D carbon structures under uniaxial tensile stress,” Carbon. 2017. link Times cited: 55 USED (low confidence) J. Moxnes, T. L. Jensen, and E. Unneberg, “Study of thermal instability of HMX crystalline polymorphs with and without molecular vacancies using reactive force field molecular dynamics,” Advanced Studies in Theoretical Physics. 2016. link Times cited: 3 Abstract: John F. Moxnes, Tomas L. Jensen, Erik Unneberg Study of ther… read moreAbstract: John F. Moxnes, Tomas L. Jensen, Erik Unneberg Study of thermal instability of HMX crystalline polymorphs with and without molecular vacancies using reactive force field molecular dynamics Advanced Studies in Theoretical Physics, Vol. 10, 2016, no. 7, 331-349 read less USED (low confidence) S. V. Gromov, I. Burmistrov, I. Ilinykh, and D. Kuznetsov, “Simulation of hydrogen adsorption on carbon nanotubes with different chirality parameters,” IOP Conference Series: Materials Science and Engineering. 2016. link Times cited: 1 Abstract: The hydrogen adsorption properties and surface charge distri… read moreAbstract: The hydrogen adsorption properties and surface charge distribution of single-walled carbon nanotubes (SWCNTs) with chirality parameters of (5, 5), (9, 5), (9, 9) were investigated using molecular dynamics methods. Relation between maximum hydrogen uptake and SWCNT structural properties was investigated. It was shown that surface charge distribution of chiral nanotubes could not be compensated for the same amount of steps that leads to fully neutral CNT with armchair structure. read less USED (low confidence) S. Thamaraikannan and S. Pradhan, “Atomistic Study of Carbon Nanotubes: Effect of Cut-Off Distance.” 2016. link Times cited: 6 USED (low confidence) A. Muniz, A. Machado, and D. Maroudas, “Mechanical behavior of interlayer-bonded nanostructures obtained from bilayer graphene,” Carbon. 2015. link Times cited: 61 USED (low confidence) J. Ma, Y. Ni, and T. Dumitricǎ, “Thermal Conductivity and Phonon Scattering in Severely Bent Carbon Nanotubes and Bi-layer Graphene,” Materials Today: Proceedings. 2015. link Times cited: 5 USED (low confidence) Y. Umeno, I. Koike, A. Kusano, H. Shima, and M. Sato, “Atomistic origin of radial corrugation in a few-walled carbon nanotubes: A molecular dynamics study,” Physica E-low-dimensional Systems & Nanostructures. 2015. link Times cited: 4 USED (low confidence) C. Wang, A. R. Chowdhury, S. Koh, and Y. Zhang, “Molecular Dynamics Simulation and Continuum Shell Model for Buckling Analysis of Carbon Nanotubes.” 2014. link Times cited: 10 USED (low confidence) P. Misra, D. Casimir, and R. Garcia-Sanchez, “Raman Spectroscopy and Molecular Dynamics Simulation Studies of Carbon Nanotubes.” 2014. link Times cited: 1 USED (low confidence) I. Koike, A. Kusano, M. Sato, Y. Umeno, and H. Shima, “WAVY-SHAPED DEFORMATION ANALYSIS OF MULTI-WALLED CARBON NANOTUBES USING MOLECULAR DYNAMICS METHOD,” Journal of Japan Society of Civil Engineers. 2014. link Times cited: 0 USED (low confidence) U. Kumar, A. K. Metya, N. Ramakrishnan, and J. Singh, “A Study of Transport Properties and Stress Analysis Using Atomistic and Macro Simulations for Lithium-Ion Batteries,” Journal of The Electrochemical Society. 2014. link Times cited: 6 Abstract: Performance of a lithium-ion based rechargeable battery is i… read moreAbstract: Performance of a lithium-ion based rechargeable battery is investigated using coupled battery model including heat and stress models via finite element method simulations. An effort is made to elucidate the importance of using diffusivity equation, in the model, as a function of lithium-ion concentration and temperature. Diffusivity expressions for both anode and cathode material are developed using atomistic simulations. Simulation results show ∼10% drop in the battery potential after 100 charge-discharge cycles. This decline in performance is attributed to the concentration gradient, heat generation and stress accumulation, substantiating the need to address these effects simultaneously. Finally, intercalation stress values due to the modified diffusivity expression are found to differ considerably with that due to the constant diffusion values used in earlier works. The findings validate the assertion that intercalation stress values depend greatly on the lithium-ion concentration based diffusivity expression. © 2014 The Electrochemical Society. [DOI: 10.1149/2.1171409jes] All rights reserved. read less USED (low confidence) A. Kheirkhah, E. S. Iranizad, M. Raeisi, and A. Rajabpour, “Mechanical properties of hydrogen functionalized graphene under shear deformation: A molecular dynamics study,” Solid State Communications. 2014. link Times cited: 32 USED (low confidence) S. Hartmann, O. Holck, and B. Wunderle, “Mechanics of CNT-palladium Interfaces for Sensor Applications Simulated with Molecular Dynamics,” Procedia Materials Science. 2014. link Times cited: 8 USED (low confidence) X. Wu, H. Zhao, M. Zhong, H. Murakawa, and M. Tsukamoto, “Molecular dynamics simulation of graphene sheets joining under ion beam irradiation,” Carbon. 2014. link Times cited: 47 USED (low confidence) A. Farajpour, A. A. Solghar, and A. Shahidi, “Postbuckling analysis of multi-layered graphene sheets under non-uniform biaxial compression,” Physica E-low-dimensional Systems & Nanostructures. 2013. link Times cited: 71 USED (low confidence) Y. Huang and T. Li, “Transportation of Hydrogen Molecules Enabled by Tortional Buckling Instability of Carbon Nanoscrolls,” MRS Proceedings. 2013. link Times cited: 0 Abstract: Using molecular dynamics simulations, we demonstrate a trans… read moreAbstract: Using molecular dynamics simulations, we demonstrate a transportation mechanism of hydrogen molecules enabled by the torsional buckling instability of carbon nanoscrolls. The transportation mechanism is shown to be of high efficacy and robust over a range of loading rates. The findings shed light on potential application of carbon nanoscroll based hydrogen storage. read less USED (low confidence) S. Rouhi and R. Ansari, “Atomistic finite element model for axial buckling and vibration analysis of single-layered graphene sheets,” Physica E-low-dimensional Systems & Nanostructures. 2012. link Times cited: 107 USED (low confidence) J. Reppert et al., “Curvature-induced Symmetry Lowering and Anomalous Dispersion of Phonons in Single-Walled Carbon Nanotubes,” MRS Proceedings. 2011. link Times cited: 0 Abstract: Here we report rich and new resonant Raman spectral features… read moreAbstract: Here we report rich and new resonant Raman spectral features for several sub-nanometer diameter single wall carbon nanotubes (sub-nm SWNTs) samples grown using chemical vapor deposition technique operating at different temperatures. We find that the high curvature in sub-nm SWNTs leads to (i) an unusual S-like dispersion of the G‑band frequency due to perturbations caused by the strong electron-phonon coupling, and (ii) an activation of diameter-selective intermediate frequency modes that are as intense as the radial breathing modes (RBMs). Furthermore, an analytical approach which includes the effects of curvature into the overlap integral and the energy gap between the van Hove singularities is discussed. Lastly, we show that the phonon spectra for sub-nm SWNTs obtained from the molecular dynamic simulations which employs a curvature-dependent force field concur with our experimental observations. read less USED (low confidence) A. Ito and S. Okamoto, “Mechanical properties of vacancy-containing graphene and graphite estimated by molecular dynamics simulations,” MRS Proceedings. 2011. link Times cited: 7 Abstract: Using molecular dynamics (MD) simulation, we investigated th… read moreAbstract: Using molecular dynamics (MD) simulation, we investigated the mechanical properties of graphene and graphite, which contain cluster-type vacancies. We found that as the vacancy size increases, the tensile strength drastically decreases to at least 56% of that of pristine graphene, whereas Young’s modulus hardly changes. In vacancy-containing graphene, we also found that slip deformation followed by fracture occurs under zigzag tension. In general, tensile strength decreases as the size of cluster-type vacancies increases. However, the tensile strength of graphene with a clustered sextuple vacancy increases as the vacancy disappears because slip deformation proceeds. Furthermore, we found that slip deformation by vacancies in graphite occurs less easily than in graphene. Our results suggest that the shape of vacancies affects the strengths of graphene and graphite. read less USED (low confidence) Ó. Restrepo and A. Delcorte, “Molecular dynamics study of metal‐organic samples bombarded by kiloelectronvolt projectiles,” Surface and Interface Analysis. 2011. link Times cited: 13 Abstract: In recent experiments involving metal‐assisted secondary ion… read moreAbstract: In recent experiments involving metal‐assisted secondary ion mass spectrometry (MetA‐SIMS), either an increase or a decrease of the sputtered organic ion yield was demonstrated depending whether the incoming projectile was atomic (Ga, In) or polyatomic (Bi3, C60). Theoretically, the electronic and molecular processes governing the yield variation are still poorly understood for metal‐organic surfaces. To unravel the physics of sputtering, molecular dynamics simulations involving metal‐organic samples have been implemented. Two targets mimicking, respectively, a gold/organic vertical interface and a molecular sample covered by gold nanoparticles were designed and bombarded with several projectiles, including Ga and C60. The results emphasize the differences of emission and molecular mechanisms induced by these projectiles and explain some of the effects observed in MetA‐SIMS. Copyright © 2010 John Wiley & Sons, Ltd. read less USED (low confidence) P. Kennedy, B. Garrison, M. F. Russo, and A. V. van Duin, “Strategies for modeling diverse chemical reactions in molecular dynamics simulations of cluster bombardment,” Surface and Interface Analysis. 2011. link Times cited: 1 Abstract: Reaction energies for the degradation reactions of poly(meth… read moreAbstract: Reaction energies for the degradation reactions of poly(methyl methacrylate) (PMMA) and for the cycloaddition of two ethylene molecules to form cyclobutane were calculated using the atomistic reactive empirical bond order potential ReaxFF, 1 and the reaction energies were then compared to reaction energies from literature sources. The PMMA degradation reaction energies were from 7 to 25 kcal/mol less endothermic than the relevant literature values. The cycloaddition reaction energy was 5 kcal/mol less exothermic for ReaxFF compared to the literature value. Copyright © 2010 John Wiley & Sons, Ltd. read less USED (low confidence) S. Sinnott, S. Heo, D. Brenner, J. Harrison, and D. Irving, “Computer Simulations of Nanometer-Scale Indentation and Friction.” 2010. link Times cited: 18 USED (low confidence) Z. Ong and E. Pop, “Molecular Dynamics Simulation of Interfacial Thermal Resistance Between a (10,10) Carbon Nanotube and SiO 2,” MRS Proceedings. 2009. link Times cited: 0 Abstract: Understanding thermal transport between carbon nanotubes (CN… read moreAbstract: Understanding thermal transport between carbon nanotubes (CNTs) and dielectric substrates is important both for nanoscale thermal management and CNT device applications. We investi-gate thermal transport between a (10,10) CNT and an SiO2 substrate through non-equilibrium classical molecular dynamics (MD) simulations. The thermal boundary conductance (TBC) is computed by setting up a temperature pulse in the CNT and monitoring its relaxation. The TBC is found to scale nearly linearly with temperature between 200�600 K, where a quantum correction is applied to the CNT heat capacity through its phonon density of states. However, the TBC ap-pears most sensitive to the strength the CNT-substrate interaction, which linearly modulates it between 0.05�0.30 WK- 1 m- 1 , in the range suggested by recent experimental data. read less USED (low confidence) M. Buehler, “Hierarchical Nanomechanics of Collagen Fibrils: Atomistic and Molecular Modeling.” 2008. link Times cited: 26 USED (low confidence) S. Jain, J. Fuhr, R. Pellenq, J. Pikunic, C. Bichara, and K. Gubbins, “Stability of porous carbon structures obtained from reverse monte carlo using tight binding and bond order hamiltonians,” Studies in Surface Science and Catalysis. 2007. link Times cited: 12 USED (low confidence) H. Urbassek, “Results of Molecular Dynamics Calculations.” 2007. link Times cited: 20 USED (low confidence) H. Cheng et al., “Molecular Dynamics Simulations of Hydrogen Adsorption in Finite and Infinite Bundles ofSingle Walled Carbon Nanotubes.” 2007. link Times cited: 2 USED (low confidence) B. Holian, T. Germann, A. Strachan, and J. Maillet, “Non-Equilibrium Molecular Dynamics Studies of Shock and Detonation Processes in Energetic Materials.” 2005. link Times cited: 2 USED (low confidence) S. Irle, G. Zheng, M. Elstner, and K. Morokuma, “High-temperature quantum chemical molecular dynamics simulations of carbon nanostructure self-assembly processes.” 2005. link Times cited: 3 USED (low confidence) J. Harrison, P. Mikulski, S. Stuart, and A. B. Tutein, “Dependence of Frictional Properties of Hydrocarbon Chains on Tip Contact Area.” 2003. link Times cited: 4 USED (low confidence) H. Cheng, A. Cooper, G. Pez, M. Kostov, M. W. Cole, and S. Stuart, “A Molecular Dynamics Simulation Study Towards Understanding the Effects of Diameter and Chirality on Hydrogen Adsorption in Singlewalled Carbon Nanotubes,” MRS Proceedings. 2003. link Times cited: 0 Abstract: A force field methodology has been developed for the descrip… read moreAbstract: A force field methodology has been developed for the description of carbon-carbon and carbon-molecular hydrogen interactions that is ideally suited to modeling hydrogen adsorption on single-walled carbon nanotubes (SWNT). The method makes use of existing parameters of potential functions developed for sp 2 and sp 3 hybridized carbon atoms and allows accurate representation of molecular forces on curved carbon surfaces. This approach has been used in molecular dynamics (MD) simulations for hydrogen adsorption in SWNT. The results reveal significant nanotube deformations, consistent with ab initio MD simulations, and the calculated energies of adsorption at room temperature are comparable to the reported experimental heats of adsorption for H 2 in SWNT. The efficiency of this new method has permitted the MD simulation of hydrogen adsorption on a wide range of SWNT types, varying such parameters as nanotube diameter and chirality. The results show that these SWNT physical parameters have a substantial effect on the energies of adsorption and hydrogen capacities. read less USED (low confidence) P. Mikulski and J. Harrison, “Molecular dynamics simulations of the friction of n-alkane monolayers,” Tribology and Interface Engineering Series. 2002. link Times cited: 0 NOT USED (low confidence) Q. Pei, W. Li, Z. Aitken, P. Liu, and Y.-W. Zhang, “Enhancing the impact property of high-entropy alloys with graphene layers: a molecular dynamics study,” Journal of Materials Science. 2023. link Times cited: 0 NOT USED (low confidence) C. Li, Y. Yu, Q. Ding, L. Yang, B. Liu, and L. Bai, “Enhancement on Lubrication Performances of Water Lubricants by Multilayer Graphene,” Tribology Letters. 2023. link Times cited: 0 NOT USED (low confidence) J. Wan, K. Cai, Y. Kang, Y. Luo, and Q. Qin, “Adjustable gas adsorption and desorption via a self-shrinking nanoscroll,” Applied Physics Letters. 2023. link Times cited: 0 Abstract: In a gas adsorption–desorption process, gas desorption consu… read moreAbstract: In a gas adsorption–desorption process, gas desorption consumes energy, as well. Hence, the development of gas adsorption–desorption methods and/or adsorbent materials with low-energy consumption for precisely controlling the reversible process is still an open issue. Taking carbon dioxide as an example, this study proposed a carbon nanospring as a unit of an adsorbent model to control the capacity for gas adsorption (CGA), via expanding for adsorption or self-shrinking for desorption by the nanoscroll made from partly hydrogenated graphene ribbon (H-GR). The numerical results obtained from the molecular dynamics approach demonstrate that the CGA of H-GR can be precisely controlled by changing the deformation of H-GR. The adjustable scope of CGA, called capacity for gas desorption, depends on the gas density and the loading speed. However, the ratio of desorption slightly depends on the gas density, which benefits gas capturing in potential application of the present material model. read less NOT USED (low confidence) H. Qin and W. Jiang, “Manipulating the interlayer thermal conductivity in circular/collapsed carbon nanotube clusters,” Journal of Physics D: Applied Physics. 2023. link Times cited: 0 Abstract: In this study, we systematically investigate the interlayer … read moreAbstract: In this study, we systematically investigate the interlayer thermal properties of circular/collapsed carbon nanotube (CNT) clusters using non-equilibrium molecular dynamics simulations. The effects of circular/collapsed state, tube diameter, layer number, and temperature are explored. The results show that the interlayer thermal conductivity in both circular and collapsed CNT clusters increases with increasing tube diameter. However, the interlayer thermal conductivity is notably lower in the collapsed state, primarily due to reduced sample length. Furthermore, the layer number within the cluster significantly affects interlayer thermal conductivity. The temperature has a pronounced effect on circular CNT cluster, where higher temperatures reduce interlayer thermal conductivity, while collapsed CNT cluster remains insensitive to temperature changes. These findings have implications for thermal management and control in CNT cluster-based nanodevices, particularly in thermoelectric applications. read less NOT USED (low confidence) P. Gao et al., “Redesign and Accelerate the AIREBO Bond-Order Potential on the New Sunway Supercomputer,” IEEE Transactions on Parallel and Distributed Systems. 2023. link Times cited: 0 Abstract: Molecular dynamics (MD) is one of the most crucial computer … read moreAbstract: Molecular dynamics (MD) is one of the most crucial computer simulation methods for understanding real-world processes at the atomic level. Reactive potentials based on the bond order concept have the ability to model dynamic bond breaking and formation with close to quantum mechanical (QM) precision without actually requiring expensive QM calculations. In this article, we focus on the adaptive intermolecular reactive empirical bond-order (AIREBO) potential in LAMMPS for the simulation of carbon and hydrocarbon systems on the new Sunway supercomputer. To achieve scalable performance, we propose a parallel two-level building scheme and periodic buffering strategy for the tailored data design to explore data locality and data reuse. Furthermore, we design two optimized nearest-neighbor access algorithms: the redistribution of accumulated coefficients algorithm and the double-end search connectivity algorithm. Finally, we implement parallel force computation with an AoS data layout and hardware/software co-cache. In addition, we have designed a low-overhead atomic operation-based load balancing method and vectorization. The overall performance of AIREBO achieves a speedup of nearly $20\times$20× on a single core group (CG), and more than $5\times$5× and $4\times$4× over an Intel Xeon E5 2680 v3 core and an Intel Xeon Gold 6138 core, respectively. Compared with the Intel accelerator package in LAMMPS, our performance further achieves $3.0\times$3.0× of an Intel Xeon E5 2680 v3 core and is better than that of an Intel Xeon Gold 6138 core. We complete the validation of the results in no more than 20.5 hours on a single node with 2,000,000 running steps (i.e., 1 ns). Our experiments show that the simulation of 2,139,095,040 atoms on 798,720 ((1MPE+64CPEs) × 12,288 processes) cores exhibits a parallel efficiency of 88% under weak scaling. read less NOT USED (low confidence) A. Azizi, R. Momen, S. Rezaee, M. Hosseini, F. Heydarian, and A. Pan, “Comprehensive scrutiny of surface mechanical parameters of graphyne-based materials for metal-ions and metal-air batteries applications: A perspective and a hybrid atomistic-continuum model,” Journal of Energy Storage. 2023. link Times cited: 0 NOT USED (low confidence) Y. Ma, H. Song, X. Niu, Y. Chen, and T. Suo, “Effect of fiber roughness on interfacial friction of fiber reinforced ceramic matrix composites,” Ceramics International. 2023. link Times cited: 0 NOT USED (low confidence) J. Baimova and S. A. Shcherbinin, “Strength and Deformation Behavior of Graphene Aerogel of Different Morphologies,” Materials. 2023. link Times cited: 0 Abstract: Graphene aerogels are of high interest nowadays since they h… read moreAbstract: Graphene aerogels are of high interest nowadays since they have ultralow density, rich porosity, high deformability, and good adsorption. In the present work, three different morphologies of graphene aerogels with a honeycomb-like structure are considered. The strength and deformation behavior of these graphene honeycomb structures are studied by molecular dynamics simulation. The effect of structural morphology on the stability of graphene aerogel is discussed. It is shown that structural changes significantly depend on the structural morphology and the loading direction. The deformation of the re-entrant honeycomb is similar to the deformation of a conventional honeycomb due to the opening of the honeycomb cells. At the first deformation stage, no stress increase is observed due to the structural transformation. Further, stress concentration on the junctions of the honeycomb structure and over the walls occurs. The addition of carbon nanotubes and graphene flakes into the cells of graphene aerogel does not result in a strength increase. The mechanisms of weakening are analyzed in detail. The obtained results further contribute to the understanding of the microscopic deformation mechanisms of graphene aerogels and their design for various applications. read less NOT USED (low confidence) M. Makwana and A. M. Patel, “Identification of microbes using single-layer graphene-based nano biosensors,” Journal of Molecular Modeling. 2023. link Times cited: 0 NOT USED (low confidence) S. Wang et al., “Atomistic Modeling of the Effect of Temperature on Interfacial Properties of 3D-Printed Continuous Carbon Fiber-Reinforced Polyamide 6 Composite: From Processing to Loading.,” ACS applied materials & interfaces. 2023. link Times cited: 0 Abstract: The combination of continuous fiber-reinforced thermoplastic… read moreAbstract: The combination of continuous fiber-reinforced thermoplastic composites (CFRTPCs) and the continuous fiber 3D printing (CF3DP) technique enables the rapid production of complex structural composites. In these 3D-printed composites, stress transfer primarily relies on the fiber-resin interface, making it a critical performance factor. The interfacial properties are significantly influenced by the temperatures applied during the loading and forming processes. While the effect of the loading temperature has been extensively researched, that of the forming temperature remains largely unexplored, especially from an atomistic perspective. Our research aims to employ molecular dynamics simulations to elucidate the effect of temperature on the interfacial properties of continuous carbon fiber-reinforced polyamide 6 (C/PA6) composites fabricated using the CF3DP technique, considering both loading and forming aspects. Through molecular dynamics simulations, we uncovered a positive correlation between the interfacial strength and forming temperature. Moreover, an increased forming temperature induced a notable shift in the failure mode of C/PA6 under uniaxial tensile loading. Furthermore, it was observed that increasing loading temperatures led to the deterioration of the mechanical properties of PA6, resulting in a gradual transition of the primary failure mode from adhesive failure to cohesive failure. This shift in the failure mode is closely associated with the glass transition of PA6. read less NOT USED (low confidence) Y. Deng, Y. Wang, K. Xu, and Y. Wang, “Lightweight Extendable Stacking Framework for Structure Classification in Atomistic Simulations.,” Journal of chemical theory and computation. 2023. link Times cited: 0 Abstract: Identifying an atom's local crystal structure is one cr… read moreAbstract: Identifying an atom's local crystal structure is one crucial step in many atomistic simulation analyses. However, many traditional methods are available to only a few limited types of structures, and their performance often relies on manually determined parameters, which may lead to poor classification results in complex material systems. Machine learning models can enhance accuracy and generalizability, but they typically require large amounts of data and computation. This issue could be more severe for deep-learning-based frameworks, especially when confronted with unfamiliar crystal structures. To address this challenge, we propose a lightweight and extendable stacked structure (LESS) classifier, which adopts bond orientational order parameters as features and assembles several efficient machine learning methods as based models. The LESS classifier can recognize a variety of crystal structures, e.g., amorphous, mono, and binary structures, with over 98.8% accuracy on our validation data set, outperforming many current methods even including some deep-learning methods. Our model can also conduct probabilistic classification that aids in the interpretation of atomic structures in complicated environments such as heterogeneous interfaces. Furthermore, when exposed to a completely unknown crystal structure, the LESS framework can efficiently incorporate this new knowledge with generative sampled data from the current model. Overall, our model exhibits great potential as an accurate and flexible atomic structure identification tool featuring high efficiency in both learning and retraining. read less NOT USED (low confidence) M. Samadian, M. Ajri, A. Azizi, and M. A. Hemmatpour-Khotbesara, “Investigating the pinhole effect on the mechanical properties of biphenylene,” Applied Physics A. 2023. link Times cited: 0 NOT USED (low confidence) M. Tang, Z. Yuan, J. Sun, X. Sun, Y. He, and X. Zhou, “Investigation on edge defect characteristics and electronic transport characteristics of graphene nano cutting,” Modelling and Simulation in Materials Science and Engineering. 2023. link Times cited: 0 Abstract: The effects of cutting crystal direction and speed on edge m… read moreAbstract: The effects of cutting crystal direction and speed on edge morphology, defects and electron transport characteristics were studied by molecular dynamics from the distribution state of defect atoms, the number of defect atoms, cutting force and radial distribution function. The edge defects of zigzag graphene nanoribbons were extracted, and the difficulty of forming different kinds of defects and the influence of different defects on band gap were studied by density functional theory. The results indicate that cutting graphene along the [010] (zigzag) direction has a smaller variance and smoother cutting. The obtained graphene nanoribbons have fewer defects and good edge quality. And the higher the cutting speed, the fewer defects of the graphene nanoribbons formed, resulting in smaller damage. The typical defects at the edges include 5–8–5 defect (double-vacancy defect), 5–9 SV defect (single-vacancy defect), stone wales (SW) defect, chain defect, crack defect and hole defect. The relationship between the magnitude of forming energy values produced by different defect types is as follows: crack defect > chain defect > SW defect > 5–9 SV defect > 5–8–5 defect > hole defect. Hole defect is the most difficult to form. The band gap width of the cut edge containing defects is smaller than that of the perfect graphene nanoribbon, resulting in the increase of the conductivity of the graphene nanoribbon in the direction of metal characteristics. The presence of defects can open the band gap with of intrinsic graphene. read less NOT USED (low confidence) M. Li et al., “Electrically gated molecular thermal switch,” Science. 2023. link Times cited: 2 Abstract: Controlling heat flow is a key challenge for applications ra… read moreAbstract: Controlling heat flow is a key challenge for applications ranging from thermal management in electronics to energy systems, industrial processing, and thermal therapy. However, progress has generally been limited by slow response times and low tunability in thermal conductance. In this work, we demonstrate an electronically gated solid-state thermal switch using self-assembled molecular junctions to achieve excellent performance at room temperature. In this three-terminal device, heat flow is continuously and reversibly modulated by an electric field through carefully controlled chemical bonding and charge distributions within the molecular interface. The devices have ultrahigh switching speeds above 1 megahertz, have on/off ratios in thermal conductance greater than 1300%, and can be switched more than 1 million times. We anticipate that these advances will generate opportunities in molecular engineering for thermal management systems and thermal circuit design. Description Editor’s summary Controlling thermal transport is challenging because of the difficulty in creating devices that work quickly and can be cycled many times. Li et al. developed a three-terminal thermal switch in which the heat flow is modulated by an electric field. The device works through careful control of chemical bonding and charge distribution. The resulting switching speeds are above 1 megahertz, with thermal conductance ratios over 1300%, and can be switched more than 10 million times. —Brent Grocholski Electrically gated atomic bonding dynamics allow for the development of a three-terminal thermal switch. read less NOT USED (low confidence) N. Ertekin, S. Rezaee, and B. Azizi, “Mechanical properties and role of 2D alkynyl carbon monolayers in the progress of lithium-air batteries,” Journal of Energy Storage. 2023. link Times cited: 0 NOT USED (low confidence) H. Yang, Y. Shen, L. Li, Y. Pan, and P. Yang, “Surface modification to induce efficient heat transfer at graphene/silicon heterointerface,” Applied Thermal Engineering. 2023. link Times cited: 0 NOT USED (low confidence) A. M. Kazakov, G. Korznikova, I. I. Tuvalev, A. A. Izosimov, and E. A. Korznikova, “The Effect of Copper–Graphene Composite Architecture on Thermal Transport Efficiency,” Materials. 2023. link Times cited: 0 Abstract: This paper presents the results of molecular dynamic modelin… read moreAbstract: This paper presents the results of molecular dynamic modeling, revealing that inserting confined graphene layers into copper crystal reduces the thermal conductivity of the whole composite, and the coefficient of thermal conductivity κ decreases upon an increase in the number of graphene layers. The injection of one, two, and three layers of 15 nm graphene leads to a change in the coefficient of thermal conductivity from 380 W/(m·K) down to 205.9, 179.1, and 163.6 W/(m·K), respectively. Decreasing the length of graphene layers leads to a decrease in the density of defects on which heat is dissipated. With one, two, and three layers of 8 nm graphene, the coefficient of thermal conductivity of the composite is equal to 272.6, 246.8, and 240.8 W/(m·K), appropriately. Meanwhile the introduction of an infinite graphene layer results in the growth of κ to 414.2–803.3 W/(m·K). read less NOT USED (low confidence) J. Leng and T. Chang, “Fluid-Solid Coupling for Microscale Transport of Nanoparticles in Ultralong Carbon Nanotubes,” Thin-Walled Structures. 2023. link Times cited: 0 NOT USED (low confidence) Z. Qu and J. Jiang, “Nanobubble-induced significant reduction of the interfacial thermal conductance for few-layer graphene.,” Physical chemistry chemical physics : PCCP. 2023. link Times cited: 0 Abstract: The heat transport properties of van der Waals layered struc… read moreAbstract: The heat transport properties of van der Waals layered structures are crucial for ensuring the reliability and longevity of high-performance optoelectronic equipment. Owing to the two-dimensional nature of atomic layers, the presence of bubbles is commonly observed within these structures. Nevertheless, the effect of bubbles on the interfacial thermal conductance remains unclear. Based on the elastic membrane theory and the improved van der Waals gas state equation, we develop an analytical formula to describe the influence of bubble shape on the interfacial thermal conductance. It shows that the presence of bubbles has a considerable impact on reducing the interfacial thermal conductance across graphene/graphene interfaces. More specifically, the presence of nanobubbles can result in a reduction of up to 53% in the interfacial thermal conductance. The validity of the analytical predictions is confirmed through molecular dynamic simulations. These results offer valuable insights into the thermal management of van der Waals layered structures in the application of next-generation electronic nanodevices. read less NOT USED (low confidence) A. Allouch et al., “Investigation of fullerene cluster growth mechanisms by carbon atom addition using classical molecular dynamics.,” The Journal of chemical physics. 2023. link Times cited: 0 Abstract: The mechanisms of carbon sticking reactions to C36 and C-C80… read moreAbstract: The mechanisms of carbon sticking reactions to C36 and C-C80 fullerenes were investigated with molecular dynamics simulations (MD) using the Second-generation Reactive Empirical Bond Order (SREBO) and Adaptive Intermolecular Reactive Empirical Bond Order (AIREBO) potentials that were specifically optimized for carbon-carbon interactions. Results showed the existence of three possible sticking configurations where the projectile atom can stick either to one, two or three atoms of the target fullerene. They also showed that although the two potentials give similar magnitudes for the sticking cross-sections, they yield fairly different results as far as sticking mechanisms and configurations at thermal collision-energies, i.e., in the range 0.05-0.5 eV, are concerned. While AIREBO, that takes into account the long-range Lennard-Jones interaction, essentially results in a surface-sticking configuration with a single atom of the target fullerene, SREBO potential yields both surface- and two neighbors-sticking (2N-sticking) configurations. The fullerene structure is preserved in the last configuration while it can be recovered by a 2000 K annealing in the former configuration. Results obtained with SREBO eventually showed larger sticking probabilities for C36 as compared with C80. In spite of this, the sticking cross-sections obtained for C80 are similar to or even larger than those obtained for C36 due to the larger size of C80 that compensates for its smaller sticking probabilities. read less NOT USED (low confidence) J. Song et al., “Achieving atomically flat copper surface: formation of mono-atomic steps and associated strain energy mechanisms,” Acta Materialia. 2023. link Times cited: 0 NOT USED (low confidence) S. Chen, N. Xu, L. Gorbatikh, and D. Seveno, “Find the maximum thermal conductivity of graphene reinforced polymer composite: A molecular dynamics approach,” Polymer Composites. 2023. link Times cited: 0 Abstract: The ultrahigh in‐plane thermal conductivity makes the graphe… read moreAbstract: The ultrahigh in‐plane thermal conductivity makes the graphene nanoplatelet a promising reinforcement filler for improving the thermal conductivity of polymer materials. Up to now, the highest thermal conductivity enhancement has been achieved by aligning the nanoplatelets along the heat flux direction. In this work, extensive molecular dynamics simulations are carried out to understand the thermal conductivity enhancement capabilities of different architectures of the graphene nanoplatelets within the polyamide‐6 matrix. Surprisingly, we find that the orthogonally arranged graphene nanoplatelets offer even better thermal conductivity enhancement than the simply aligned graphene nanoplatelets. An in‐depth investigation shows that the orthogonal structure can achieve a balance between the global percolation and the alignment of graphene nanoplatelets. Specifically, such an orthogonal structure can take advantage of both thermal percolation and graphene's ultrahigh in‐plane thermal conductivity. Moreover, we have systematically investigated the effects of the size and number density of the nanoplatelets on the thermal conductivity enhancement capability of the orthogonal configuration. Finally, by proposing a validated analytical model, we have identified the pathways to maximize the thermal conductivity of the orthogonally arranged graphene nanoplatelets. The conclusion of this work points out the possible way to develop the graphene‐polymer composite system with exceedingly high thermal conductivity.
Different graphene configurations are constructed for polymer composite.
Chemical reactions at the edge of graphene nanoplatelets are considered.
High‐throughput molecular dynamics simulations are conducted to measure thermal conductivity.
Competition between graphene alignment and thermal percolation is identified.
A theoretical model is established for graphene‐polymer composite.
read less NOT USED (low confidence) Q. Pei, J.-Y. Guo, A. Suwardi, and G. Zhang, “Insights into Interfacial Thermal Resistance in Bi2Te3/Graphene Composites for Thermoelectric Applications,” The Journal of Physical Chemistry C. 2023. link Times cited: 0 NOT USED (low confidence) S. Khosravani, M. H. Sadr, E. Carrera, A. Pagani, and R. Masia, “Multi-scale analysis of thermal conductivity of graphene foam/PDMS composites,” Mechanics of Advanced Materials and Structures. 2023. link Times cited: 5 NOT USED (low confidence) J. Hossain and B. H. Kim, “The validity of the continuum modeling limit in a single pore flows to the molecular scale.,” Physical chemistry chemical physics : PCCP. 2023. link Times cited: 0 Abstract: The discrete characteristics of molecules become dominant in… read moreAbstract: The discrete characteristics of molecules become dominant in the molecular regime when the surface-to-volume ratio becomes very high. Using the well-established continuum approach is questionable due to this dominant behavior. Due to the lack of perfect modeling of such a small-scale system, the experimentalist must rely on the trial and error method. Here we analyze the water transport mechanism through a nanoporous graphene membrane at the molecular level by adopting the classical molecular dynamics (MD) simulation. The results for SPC/E water molecules were compared with those obtained for liquid argon atoms and continuum Sampson's equation predictions. We find that the effect of local variants such as density layering, interatomic forces, slip velocity, and geometric boundary conditions become exponentially dominant with decreasing nanopore size. Consequently, the continuum assumptions break down at 1.5 nm pore diameter due to neglecting the dominant local properties. read less NOT USED (low confidence) Y. Timoshina, E. Voznesensky, A. I. Teptina, and Y. O. Zhelonkin, “Model of the Interaction of Reactive Gases with Polymer Materials in Low-Pressure Radio-Frequency Plasma,” High Energy Chemistry. 2023. link Times cited: 0 NOT USED (low confidence) B. Zhang, Y. Li, and B. Zhang, “Cracking direction in graphene under mixed mode loading,” Engineering Fracture Mechanics. 2023. link Times cited: 0 NOT USED (low confidence) Y.-S. Kang, K. Cai, J. Shi, Y. Luo, and Y. Zhang, “CNT-based nanogun triggered by an electric field,” Computational Materials Science. 2023. link Times cited: 0 NOT USED (low confidence) H. Shi et al., “Role of extrinsic and intrinsic toughening mechanisms in graphene nanosheets reinforced magnesium matrix layered composites,” Materials Science and Engineering: A. 2023. link Times cited: 0 NOT USED (low confidence) S. Aditya, T. Sohail, and S. Roy, “An atomistic-continuum concurrent statistical coupling technique for amorphous materials using anchor points,” Modelling and Simulation in Materials Science and Engineering. 2023. link Times cited: 0 Abstract: A generalized framework for anchor point based concurrent co… read moreAbstract: A generalized framework for anchor point based concurrent coupling of finite element method (FEM) and molecular dynamics (MD) domains, incorporating previous related methods, is presented. The framework is robust and is agnostic of material crystallinity and atomistic description. The method follows an iterative approach to minimize the total energy of the coupled FEM-MD system, while maintaining displacement constraints between the domains. Two distinct forms of the coupling method are discussed in detail, differing in the nature of the constraint, both of which are able to make use of specialized MD solvers such as LAMMPS with little or no modification. Both methods make use of springs that join groups of atoms in the MD to the FEM domain. Method 1, termed ‘Direct Coupling’, couples MD anchor points directly to the FEM domain in a force-based manner and has the added advantage of being able to couple to specialized FEM solvers such as ABAQUS. Method 2 couples the MD to the FEM domain in a more ‘soft’ manner using the method of Lagrange multipliers and least squares approximation. The relative performance of these two methods are tested against each other in a uniaxial tension test using a graphene monolayer at 300 K temperature and a block of thermosetting polymer EPON862 at low temperature, showing comparable results. Convergence behaviour of the two coupling methods are studied and presented. The methods are then applied to the fracture of a centre-cracked graphene monolayer and compared with results from an identical pure MD simulation. The results corroborate the effectiveness of the developed method and potential use as a plug-and-play tool to couple pre-existing specialized FEM and MD solvers. Future work will focus on applying these methods to simulate elevated-temperature amorphous polymer models and their brittle fracture. read less NOT USED (low confidence) D. Yang et al., “Multimodal E-Textile Enabled by One-Step Maskless Patterning of Femtosecond-Laser-Induced Graphene on Nonwoven, Knit, and Woven Textiles.,” ACS nano. 2023. link Times cited: 2 Abstract: Personal wearable devices are considered important in advanc… read moreAbstract: Personal wearable devices are considered important in advanced healthcare, military, and sports applications. Among them, e-textiles are the best candidates because of their intrinsic conformability without any additional device installation. However, e-textile manufacturing to date has a high process complexity and low design flexibility. Here, we report the direct laser writing of e-textiles by converting raw Kevlar textiles to electrically conductive laser-induced graphene (LIG) via femtosecond laser pulses in ambient air. The resulting LIG has high electrical conductivity and chemical reliability with a low sheet resistance of 2.86 Ω/□. Wearable multimodal e-textile sensors and supercapacitors are realized on different types of Kevlar textiles, including nonwoven, knit, and woven structures, by considering their structural textile characteristics. The nonwoven textile exhibits high mechanical stability, making it suitable for applications in temperature sensors and micro-supercapacitors. On the other hand, the knit textile possesses inherent spring-like stretchability, enabling its use in the fabrication of strain sensors for human motion detection. Additionally, the woven textile offers special sensitive pressure-sensing networks between the warp and weft parts, making it suitable for the fabrication of bending sensors used in detecting human voices. This direct laser synthesis of arbitrarily patterned LIGs from various textile structures could result in the facile realization of wearable electronic sensors and energy storage. read less NOT USED (low confidence) J. Li, J. Tang, G. Ni, L. Zhang, C. Tang, and J. Song, “Research on the influence of single-crystal germanium cutting parameters based on molecular dynamics,” Molecular Physics. 2023. link Times cited: 0 Abstract: As a metalloid with unique properties, single crystal german… read moreAbstract: As a metalloid with unique properties, single crystal germanium is widely used in semiconductors, infrared optics, and other fields. To ensure the processing accuracy of single-crystal germanium, it is necessary to optimise the selection of parameters during processing. This paper uses molecular dynamics methods to study the cutting process of single-crystal germanium with the cutting depth and cutting speed as parameters and uses nanoindentation method to test the mechanical properties of the processed single-crystal germanium surface. The study found that with the increase of cutting depth, the cutting force and cutting heat increased significantly, the depth of the deformed layer increased significantly, and the stiffness of single-crystal germanium decreased significantly; with the increase of cutting speed, there was no built-up edge Influence, the cutting force is reduced, and more cutting heat is generated, and the depth of the deformation layer is higher, and the HCP structure increases, but the cutting speed has no obvious relationship with the mechanical properties of the machined surface. GRAPHICAL ABSTRACT read less NOT USED (low confidence) L. V. Sang, “Graphene nanospheres and their mechanical and tribological responses,” Tribology International. 2023. link Times cited: 1 NOT USED (low confidence) V. Porsev and R. Evarestov, “Current State of Computational Modeling of Nanohelicenes,” Nanomaterials. 2023. link Times cited: 0 Abstract: This review considers the works that focus on various aspect… read moreAbstract: This review considers the works that focus on various aspects of the theoretical description of nanohelicenes (other equivalent names are graphene spirals, graphene helicoid, helical graphene nanoribbon, or helical graphene)—a promising class of one-dimensional nanostructures. The intrinsic helical topology and continuous π-system lead to the manifestation of unique optical, electronic, and magnetic properties that are also highly dependent on axial and torsion strains. In this paper, it was shown that the properties of nanohelicenes are mainly associated with the peripheral modification of the nanohelicene ribbon. We have proposed a nomenclature that enables the classification of all nanohelicenes as modifications of some prototype classes. read less NOT USED (low confidence) Z. Rahimi, T. Koslowski, and A. Lohrasebi, “Water purification modeling by functionalized hourglass-shape multilayer nano-channel.,” Journal of molecular graphics & modelling. 2023. link Times cited: 0 NOT USED (low confidence) F. Wang, L. Li, X. Jiang, H. Tang, X. Wang, and Y. Hu, “High damping and modulus of aluminum matrix composites reinforced with carbon nanotube skeleton inspired by diamond lattice,” Composite Structures. 2023. link Times cited: 0 NOT USED (low confidence) C. M. Miliante, J. P. D. de Matos, and A. Muniz, “Structural, electronic and mechanical properties of double core carbon nanothreads,” Carbon. 2023. link Times cited: 0 NOT USED (low confidence) E. Vorobyeva, A. V. Stepanov, and A. Evseev, “Effect of Many-Particle Interactions on the Transport Properties of Low-Energy Ions in Carbon Nanotubes,” Moscow University Physics Bulletin. 2023. link Times cited: 0 NOT USED (low confidence) B. Sewwandi et al., “Size-Tunable Graphitized Carbon Spheres for Water Defluoridation,” SSRN Electronic Journal. 2023. link Times cited: 0 NOT USED (low confidence) X. Jiang, H. Sun, K. Choudhary, H. Zhuang, and Q. Nian, “Interpretable Ensemble Learning for Materials Property Prediction with Classical Interatomic Potentials: Carbon as an Example,” ArXiv. 2023. link Times cited: 0 Abstract: Machine learning (ML) is widely used to explore crystal mate… read moreAbstract: Machine learning (ML) is widely used to explore crystal materials and predict their properties. However, the training is time-consuming for deep-learning models, and the regression process is a black box that is hard to interpret. Also, the preprocess to transfer a crystal structure into the input of ML, called descriptor, needs to be designed carefully. To efficiently predict important properties of materials, we propose an approach based on ensemble learning consisting of regression trees to predict formation energy and elastic constants based on small-size datasets of carbon allotropes as an example. Without using any descriptor, the inputs are the properties calculated by molecular dynamics with 9 different classical interatomic potentials. Overall, the results from ensemble learning are more accurate than those from classical interatomic potentials, and ensemble learning can capture the relatively accurate properties from the 9 classical potentials as criteria for predicting the final properties. read less NOT USED (low confidence) J. Tan, Y. Guo, and W. Guo, “Diameter-Optimum Spreading for the Impinging of Water Nanodroplets on Solid Surfaces.,” Langmuir : the ACS journal of surfaces and colloids. 2023. link Times cited: 0 Abstract: The impinging of water nanodroplets on solid surfaces is cru… read moreAbstract: The impinging of water nanodroplets on solid surfaces is crucial to many nanotechnologies. Through large-scale molecular dynamics simulations, the size effect on the spreading of water nanodroplets after impinging on hydrophilic, graphite, and hydrophobic surfaces under low impinging velocities has been systematically studied. The spreading rates of nanodroplets first increase and then decrease and gradually become constant with the increase of nanodroplet diameter. The nanodroplets with the diameters of 17-19 nm possess the highest spreading rates because of the combined effect of the strongest interfacial interaction and the strongest surface interaction within water molecules. The highest water molecule densities, hydrogen bond numbers, and dielectric constants of interface and surface layers mainly contribute to the lowest interface work of adhesion and surface tension values at optimal diameters. These results unveil the nonmonotonic characteristics of spreading velocity, interface work of adhesion and surface tension with nanodroplet diameter for nanodroplets on solid surfaces. read less NOT USED (low confidence) S. Thakur and A. Giri, “Role of Anharmonicity in Dictating the Thermal Boundary Conductance across Interfaces Comprised of Two-Dimensional Materials,” Physical Review Applied. 2023. link Times cited: 0 NOT USED (low confidence) P. Babaev et al., “Atomic-scale insights into damage produced by swift heavy ions in polyethylene,” Journal of Materials Science. 2023. link Times cited: 0 NOT USED (low confidence) S. Yang et al., “Manipulating the Thermal Conductivity of the Graphene/Poly(vinyl alcohol) Composite via Surface Functionalization: A Multiscale Simulation.,” Langmuir : the ACS journal of surfaces and colloids. 2023. link Times cited: 0 Abstract: The reverse non-equilibrium molecular dynamics simulation is… read moreAbstract: The reverse non-equilibrium molecular dynamics simulation is used to investigate the influence of functional groups (FGs) on the thermal conductivity of a graphene/poly(vinyl alcohol) (PVA) composite, which considers non-polar (methyl) and polar (hydroxyl, amino, and carboxyl) groups. First, the polar groups can be more effective to improve the interfacial thermal conductivity than the non-polar group. This can be explained well by characterizing the interfacial Coulombic energy, number and lifetime of hydrogen bonds, vibrational density of states, and integrated autocorrelation of the interfacial heat power. Moreover, the hydroxyl group can improve the interfacial thermal conductivity more than the other groups, which can be rationalized by analyzing the surface roughness of graphene and the radial distribution function of FGs and the PVA chains. However, the introduction of FGs destroys the graphene structure, which consequently reduces the intrinsic thermal conductivity. Furthermore, by adopting the effective medium approximation model and finite element method, there exists a critical graphene length where the overall thermal conductivities are equal for the functionalized and pristine graphene. Finally, the distribution state of graphene is emphasized to be more vital in determining the overall thermal conductivity than the generally accepted interfacial thermal conductivity. read less NOT USED (low confidence) Y. Ito et al., “Correlation between properties of various carbon defects and electrochemical charge carrier storage mechanisms for use in Li- and Na-based rechargeable batteries,” Chemical Physics Reviews. 2023. link Times cited: 0 Abstract: With the growing interest in promising energy sources for hi… read moreAbstract: With the growing interest in promising energy sources for high-energy-demand devices, the development of materials for use in rechargeable batteries based on electrochemical charge carrier storage, such as Li and Na, has attracted intensive attention. Among them, carbon materials (e.g., graphene, graphite, and disordered carbons) have been extensively used as electrode materials for battery systems because of their critical advantages, namely, relatively good charge carrier storage capability, low cost, abundant resources, and simple manufacturing process. In particular, various types of defects are indispensably formed in the carbon structure during the manufacturing processes, which significantly influence their electrochemical charge carrier storage mechanisms and thus determine the electrochemical properties of the carbon-based rechargeable battery systems. This comprehensive review summarizes the correlation between the fundamental properties of carbon defects and electrochemical Li and Na storage mechanisms for Li- and Na-based rechargeable batteries, representative cations using battery systems, with a special focus on atomic-scale science and technology, which have a notable role in investigating and understanding the interaction between the defect phases and charge carriers in carbon structures. First, various carbon defects are categorized for the purpose of this work; then, computational/experimental methods for analyzing them and their critical properties (especially electronic structure) are introduced because identifying defect types is critical. Next, the roles and influences of carbon defects on electrochemical charge carrier storage mechanisms (especially adsorption and intercalation [insertion], diffusion, and formation of metal clusters) are described for Li- and Na-based rechargeable batteries. This study focuses on the physicochemical and electrochemical properties, which are key characteristics of carbon defects that determine their optimal utilization in rechargeable battery systems. read less NOT USED (low confidence) Q. Mao, M. Feng, X. Jiang, Y. Ren, K. Luo, and A. V. van Duin, “Classical and reactive molecular dynamics: Principles and applications in combustion and energy systems,” Progress in Energy and Combustion Science. 2023. link Times cited: 10 NOT USED (low confidence) H. Ma et al., “Graphene Coating- and Electro-wetting Strategy for Micro/Nanostructured Surfaces,” Journal of Molecular Liquids. 2023. link Times cited: 0 NOT USED (low confidence) F. Khorobrykh et al., “Cluster structure of ultrahard fullerite revealed by Raman spectroscopy,” Carbon. 2023. link Times cited: 0 NOT USED (low confidence) H. Xie, Z. Ma, W. Zhang, H. Zhao, and L. Ren, “Graphene enables equiatomic FeNiCrCoCu high-entropy alloy with improved TWIP and TRIP effects under shock compression,” Journal of Materials Science & Technology. 2023. link Times cited: 1 NOT USED (low confidence) R. Cappabianca, P. D. Angelis, M. Fasano, E. Chiavazzo, and P. Asinari, “An Overview on Transport Phenomena within Solid Electrolyte Interphase and Their Impact on the Performance and Durability of Lithium-Ion Batteries,” Energies. 2023. link Times cited: 0 Abstract: The nature of the electrode–electrolyte interface has an imp… read moreAbstract: The nature of the electrode–electrolyte interface has an impact on the performance and durability of lithium-ion batteries (LIBs). The initial electrolyte’s thermodynamic instability at the anode–electrolyte interface in LIBs results in the formation of a passivation layer, called solid electrolyte interphase (SEI). The initial dense and intact layer allows Li+ transport and restricts electron tunneling, thus preventing electrolyte decomposition and ensuring the electrochemical stability of a battery. However, the growth of this layer can reduce the availability of active lithium and electrolyte, and ultimately lead to an irreversible battery capacity fade. Investigating the transport phenomena of lithium ions within SEI is crucial for understanding its formation and growth. Nonetheless, accurately describing all relevant mechanisms is challenging due to its complex and multiscale nature. An overview of current computational efforts to study Li+ transport within SEI is given in this article, ranging from electronic/atomistic scale simulations to macroscopic models. The drawbacks and advantages of the proposed numerical approaches are summarized along with the obstacles that need to be overcome to obtain accurate experimental data, identified on the basis of the most recent literature evidence. We highlight collaboration gaps between modeling and experimental approaches, as well as the urgent need for new multiscale models, to gain a better understanding of such a crucial transport phenomenon. read less NOT USED (low confidence) S. J. Rodr’iguez, A. Candia, I. Stanković, M. Passeggi, and G. Ruano, “Study of In-Plane and Interlayer Interactions During Aluminum Fluoride Intercalation in Graphite: Implications for the Development of Rechargeable Batteries,” ACS Applied Nano Materials. 2023. link Times cited: 0 Abstract: The electrolyte intercalation mechanism facilitates the inse… read moreAbstract: The electrolyte intercalation mechanism facilitates the insertion/extraction of charge into the electrode material in rechargeable batteries. Aluminum fluoride (AlF$_{3}$) has been used as an electrolyte in rechargeable aluminum batteries with graphite electrodes, demonstrating improved reversibility of battery charging and discharging processes; however, the intercalation mechanism of this neutral molecule in graphite is so far unknown. In this work, we combine scanning tunneling microscopy (STM) in ultra-high vacuum conditions, calculations based on density functional theory, and large-scale molecular dynamics simulations to reveal the mechanism of AlF$_{3}$ intercalation in highly oriented pyrolytic graphite (HOPG). We report the formation of AlF$_{3}$ molecules clusters between graphite layers, their self-assembly by graphene buckling-mediated interactions, and explain the origin and distribution of superficial {\it blisters} in the material. Our findings have implications for understanding the relationship between the mobility and clustering of molecules and the expansion of the anode material. This, in turn, paves the way for future enhancements in the performance of energy storage systems. read less NOT USED (low confidence) N. Zimbovskaya and A. Nitzan, “Phonon transport along long polymer chains with varying configurations: Effects of phonon scattering.,” The Journal of chemical physics. 2023. link Times cited: 0 Abstract: Following recent molecular dynamic simulations [M. Dinpajooh… read moreAbstract: Following recent molecular dynamic simulations [M. Dinpajooh and A. Nitzan, J. Chem. Phys. 153, 164903 (2020)], we theoretically analyze how the phonon heat transport along a single polymer chain may be affected by varying the chain configuration. We suggest that phonon scattering controls the phonon heat conduction in strongly compressed (and tangled) chain when multiple random bends act as scattering centers for vibrational phonon modes, which results in the diffusive character of heat transport. As the chain is straightening up, the number of scatterers decreases, and the heat transport acquires nearly ballistic character. To analyze these effects, we introduce a model of a long atomic chain made out of identical atoms where some atoms are put in contact with scatterers and treat the phonon heat transfer through such a system as a multichannel scattering problem. We simulate the changes in the chain configurations by varying the number of the scatterers and mimic a gradual straightening of the chain by a gradual reducing of the number of scatterers attached to the chain atoms. It is demonstrated, in agreement with recently published simulation results, that the phonon thermal conductance shows a threshold-like transition from the limit where nearly all atoms are attached to the scatterers to the opposite limit where the scatterers vanish, which corresponds to a transition from the diffusive to the ballistic phonon transport. read less NOT USED (low confidence) C. Ugwumadu et al., “Self-Assembly and the Properties of Micro-Mesoporous Carbon.,” Journal of chemical theory and computation. 2023. link Times cited: 2 Abstract: This study introduces a new approach for constructing atomis… read moreAbstract: This study introduces a new approach for constructing atomistic models of nanoporous carbon by randomly distributing carbon atoms and pore volumes in a periodic box and then using empirical and ab initio molecular simulation tools to find the suitable energy-minimum structures. The models, consisting of 5000, 8000, 12000, and 64000 atoms, each at mass densities of 0.5, 0.75, and 1 g/cm3, were analyzed to determine their structural characteristics and relaxed pore size distribution. Surface analysis of the pore region revealed that sp atoms exist predominantly on surfaces and act as active sites for oxygen adsorption. We also investigated the electronic and vibrational properties of the models, and localized states near the Fermi level were found to be primarily situated at sp carbon atoms through which electrical conduction may occur. Additionally, the thermal conductivity was calculated using heat flux correlations and the Green-Kubo formula, and its dependence on pore geometry and connectivity was analyzed. The behavior of the mechanical elasticity moduli (Shear, Bulk, and Young's moduli) of nanoporous carbons at the densities of interest was discussed. read less NOT USED (low confidence) R. Tromer et al., “Mechanical, Electronic, and Optical Properties of 8-16-4 Graphyne: A 2D Carbon Allotrope with Dirac Cones,” The Journal of Physical Chemistry C. 2023. link Times cited: 1 NOT USED (low confidence) Z. Hu, M. Xue, Z. Zhang, W. Guo, and B. Yakobson, “Growth Instability of 2D Materials on Non-Euclidean Surfaces.,” ACS nano. 2023. link Times cited: 0 Abstract: Chemical growth of two-dimensional (2D) materials with contr… read moreAbstract: Chemical growth of two-dimensional (2D) materials with controlled morphology is critical to bring their tantalizing properties to fruition. However, the growth must be on a substrate, which involves either intrinsic or intentionally introduced undulation, at a scale significantly larger than the materials thickness. Recent theory and experiments showed that 2D materials grown on a curved feature on substrates can incur a variety of topological defects and grain boundaries. Using a Monte Carlo method, we herein show that 2D materials growing on periodically undulated substrates with nonzero Gaussian curvature of practical relevance follow three distinct modes: defect-free conformal, defect-free suspension and defective conformal modes. The growth on the non-Euclidean surface can accumulate tensile stress that gradually lifts the materials from substrates and progressively turns the conformal mode into a suspension mode with increasing the undulation amplitude. Further enhancing the undulation can trigger Asaro-Tiller-Grinfield growth instability in the materials, manifested as discretely distributed topological defects due to strong stress concentration. We rationalize these results by model analyses and establish a "phase" diagram for guiding the control of growth morphology via substrate patterning. The undulation-induced suspension of 2D materials can help understand the formation of overlapping grain boundaries, spotted quite often in experiments, and guide how to avoid them. read less NOT USED (low confidence) M. A. Rahman, S. Thakur, P. Hopkins, and A. Giri, “Engineering the Electronic and Thermal Properties of Two-Dimensional Covalent Organic Frameworks,” The Journal of Physical Chemistry C. 2023. link Times cited: 0 Abstract: : Two-dimensional covalent organic frameworks (2D COFs) are … read moreAbstract: : Two-dimensional covalent organic frameworks (2D COFs) are a class of modular polymeric crystals with high porosities and large surface areas. Their tunable microstructure (with a wide array of choices for the molecular building block) provides the opportunity for their bottom-up design and potentially tailorable physical properties. In this work, through combined density functional theory (DFT) calculations and molecular dynamics (MD) simulations, we study the influence of different molecular functional groups and varying porosities on the electronic and thermal properties of 2D COFs. More specifically, by performing DFT calculations on 24 different 2D COFs, we demonstrate that one of the main descriptors dictating their band gaps are their mass densities or network porosities. Furthermore, we also find that specific functional groups forming the nodes can lead to larger localization of charge densities resulting in wider band gaps. By performing MD simulations to investigate their thermal properties, we show that (similar to their electronic properties) mass density is also one of the main factors dictating heat conduction, where higher densities are associated with relatively higher thermal conductivities along the 2D sheets. Our spectral energy density calculations provide insights into the highly anharmonic nature of these materials. We find that increasing porosities lead to larger anharmonic interactions and thus reduced thermal conductivities in these materials. Similar to their electronic band gaps, the nodes forming the 2D COFs also have a significant contribution in dictating their thermal conductivities with bigger nodes (accompanied by higher densities) generally resulting in relatively higher thermal conductivities in 2D COFs. Taken together, the resulting changes in the electronic and thermal properties from variations in the building blocks in 2D COFs lend insights into fundamental changes in the microscopic thermodynamics that arise from systematically changing their molecular structure. Therefore, our study provides a blueprint for the strategic syntheses of 2D COFs with “user-defined” electronic read less NOT USED (low confidence) F. Sha’bani and S. Rash-Ahmadi, “A novel upgraded molecular mechanics framework with considering the length scale parameter and its advantages in analyzing the behavior of nanostructures,” Proceedings of the Institution of Mechanical Engineers, Part C: Journal of Mechanical Engineering Science. 2023. link Times cited: 0 Abstract: A novel upgraded molecular mechanics framework has been deve… read moreAbstract: A novel upgraded molecular mechanics framework has been developed by improving the flexural and torsional behavior in bonds between atoms based on modified couple stress theory (MCS-MM). The MCS-MM approach drives a considerable advancement in predicting the mechanical behavior of nanostructures. Due to applying the modified couple stress theory in the beam energy equations, the length scale parameter is added to the equations. The presented method provides a better prediction for the elastic and geometric properties of the equivalent beams in the atomic structure. In order to show the efficiency of this upgraded proposed model, various aspects of graphene sheets were considered, such as energy deviation, mechanical properties, buckling behavior, and crack opening displacement (COD). The results confirm the efficiency and accuracy of the model and are consistent with molecular dynamics modeling. The MCS MM method leads to a significant improvement in strain energy deviation. It predicts the elastic properties and mechanical behavior of graphene sheets more accurately. The MCS-MM method can be replaced with previous ones as an appropriate approach. read less NOT USED (low confidence) M. Gounzari, A. Kotri, Y. Belkassmi, and L. Elmaimouni, “Atomistic insights into the effect of cooling rates on mechanical properties of glassy graphene,” Solid State Communications. 2023. link Times cited: 2 NOT USED (low confidence) B. Goh and J. Choi, “Nonlinear multiscale model for interstitial structures of densely ordered multi-walled carbon nanotube bundles,” Carbon. 2023. link Times cited: 1 NOT USED (low confidence) A. Savin and O. Savina, “Acoustic Solitons in Helicoids and Spiral Graphene Nanoribbons,” Journal of Experimental and Theoretical Physics. 2023. link Times cited: 0 NOT USED (low confidence) N. Nayir et al., “Modeling and simulations for 2D materials: a ReaxFF perspective,” 2D Materials. 2023. link Times cited: 5 Abstract: Recent advancements in the field of two-dimensional (2D) mat… read moreAbstract: Recent advancements in the field of two-dimensional (2D) materials have led to the discovery of a wide range of 2D materials with intriguing properties. Atomistic-scale simulation methods have played a key role in these discoveries. In this review, we provide an overview of the recent progress in ReaxFF force field developments and applications in modeling the following layered and nonlayered 2D materials: graphene, transition metal dichalcogenides, MXenes, hexagonal boron nitrides, groups III-, IV- and V-elemental materials, as well as the mixed dimensional van der Waals heterostructures. We further discuss knowledge gaps and challenges associated with synthesis and characterization of 2D materials. We close this review with an outlook addressing the challenges as well as plans regarding ReaxFF development and possible large-scale simulations, which should be helpful to guide experimental studies in a discovery of new materials and devices. read less NOT USED (low confidence) M. Dewapriya, R. Rajapakse, and W. Dias, “Uncovering stress fields and defects distributions in graphene using deep neural networks,” International Journal of Fracture. 2023. link Times cited: 0 NOT USED (low confidence) B. Wang, W. Shao, Q. Cao, and Z. Cui, “Thermal Conductivity Enhancement of Graphene/Epoxy Nanocomposites by Reducing Interfacial Thermal Resistance,” The Journal of Physical Chemistry C. 2023. link Times cited: 0 NOT USED (low confidence) X. Yuan and S. Zhu, “Compressive strain engineering of strong and sensitive pseudomagnetic fields in buckled graphene nanobubbles,” Physical Review B. 2023. link Times cited: 0 NOT USED (low confidence) Z. Qu, B. Wang, and J. Jiang, “The Gas in Graphene Bubbles: An Improved van der Waals Equation Description,” The Journal of Physical Chemistry C. 2023. link Times cited: 1 NOT USED (low confidence) F. Vines, A. Calzada, and P. Gamallo, “Thermodynamic, kinetic and dynamic aspects of biogas upgrading using nano-engineered grazynes,” Journal of CO2 Utilization. 2023. link Times cited: 0 NOT USED (low confidence) G. Yamamoto, Y. Chen, A. Kunitomo, N. Shigemitsu, and T. Shindo, “Decreasing Vacancy-Defect Sensitivity in Multi-Walled Carbon Nanotubes Through Interwall Coupling,” Carbon Trends. 2023. link Times cited: 0 NOT USED (low confidence) Z. Xiong, Z. Liang, Y. Bu, K. Li, H. Zhang, and J. Zhang, “The effect of vacancy size on the oxidation process of graphene by CO2: A ReaxFF molecular dynamics study,” Diamond and Related Materials. 2023. link Times cited: 2 NOT USED (low confidence) D. Zhang, M. Huang, L. Klausen, Q. Li, S. Li, and M. M. Dong, “Liquid-Phase Friction of Two-Dimensional Molybdenum Disulfide at the Atomic Scale.,” ACS applied materials & interfaces. 2023. link Times cited: 0 Abstract: Tribological properties depend strongly on environmental con… read moreAbstract: Tribological properties depend strongly on environmental conditions such as temperature, humidity, and operation liquid. However, the origin of the liquid effect on friction remains largely unexplored. Herein, taking molybdenum disulfide (MoS2) as a model system, we explored the nanoscale friction of MoS2 in polar (water) and nonpolar (dodecane) liquids through friction force microscopy. The friction force exhibits a similar layer-dependent behavior in liquids as in air; i.e., thinner samples have a larger friction force. Interestingly, friction is significantly influenced by the polarity of the liquid, and it is larger in polar water than in nonpolar dodecane. Atomically resolved friction images together with atomistic simulations reveal that the polarity of the liquid has a substantial effect on friction behavior, where liquid molecule arrangement and hydrogen-bond formation lead to a higher resistance in polar water in comparison to that in nonpolar dodecane. This work provides insights into the friction on two-dimensional layered materials in liquids and holds great promise for future low-friction technologies. read less NOT USED (low confidence) G. Wang et al., “Recent advances in the mechanics of 2D materials,” International Journal of Extreme Manufacturing. 2023. link Times cited: 7 Abstract: The exceptional physical properties and unique layered struc… read moreAbstract: The exceptional physical properties and unique layered structure of two-dimensional (2D) materials have made this class of materials great candidates for applications in electronics, energy conversion/storage devices, nanocomposites, and multifunctional coatings, among others. At the center of this application space, mechanical properties play a vital role in materials design, manufacturing, integration and performance. The emergence of 2D materials has also sparked broad scientific inquiry, with new understanding of mechanical interactions between 2D structures and interfaces being of great interest to the community. Building on the dramatic expansion of recent research activities, here we review significant advances in the understanding of the elastic properties, in-plane failures, fatigue performance, interfacial shear/friction, and adhesion behavior of 2D materials. In this article, special emphasis is placed on some new 2D materials, novel characterization techniques and computational methods, as well as insights into deformation and failure mechanisms. A deep understanding of the intrinsic and extrinsic factors that govern 2D material mechanics is further provided, in the hopes that the community may draw design strategies for structural and interfacial engineering of 2D material systems. We end this review article with a discussion of our perspective on the state of the field and outlook on areas for future research directions. read less NOT USED (low confidence) L. Najmi and Z. Hu, “Review on Molecular Dynamics Simulations of Effects of Carbon Nanotubes (CNTs) on Electrical and Thermal Conductivities of CNT-Modified Polymeric Composites,” Journal of Composites Science. 2023. link Times cited: 7 Abstract: Due to the unique properties of carbon nanotubes (CNTs), the… read moreAbstract: Due to the unique properties of carbon nanotubes (CNTs), the electrical and thermal conductivity of CNT-modified polymeric composites (CNTMPCs) can be manipulated and depend on several factors. There are many factors that affect the thermal and electrical conductivity of CNTs and CNTMPCs, such as chirality, length, type of CNTs, fabrication, surface treatment, matrix and interfacial interaction between the matrix and reinforcement (CNTs). This paper reviews the research on molecular dynamics (MD) simulations of the effects of some factors affecting the thermal and electrical conductivity of CNTs and CNTMPCs. First, the chirality dependence of the thermal and electrical conductivity of single-walled carbon nanotubes (SWNTs) was analyzed. The effect of chirality on the conductivity of short-length CNTs is greater than that of long-length CNTs, and the larger the chiral angle, the greater the conductivity of the CNTs. Furthermore, the thermal and electrical conductivity of the zigzag CNTs is smaller than that of the armchair one. Therefore, as the tube aspect ratio becomes longer and conductivity increases, while the effect of chirality on the conductivity decreases. In addition, hydrogen bonding affects the electrical and thermal conductivity of the CNTMPCs. The modeling of SWNTs shows that the thermal and electrical conductivity increases significantly with increasing overlap length. MD simulations can be effectively used to design highly conductive CNTMPCs with appropriated thermal and electrical properties. Since there are too many factors affecting the thermal and electrical conductivity of CNTMPCs, this paper only reviews the effects of limited factors on the thermal and electrical conductivity of CNTs and CNTMPCs based on MD simulations, and further detailed studies are required. read less NOT USED (low confidence) G. Jung, H. Myung, and S. Irle, “Artificial neural network potentials for mechanics and fracture dynamics of two-dimensional crystals,” Machine Learning: Science and Technology. 2023. link Times cited: 1 Abstract: Understanding the mechanics and failure of materials at the … read moreAbstract: Understanding the mechanics and failure of materials at the nanoscale is critical for their engineering and applications. The accurate atomistic modeling of brittle failure with crack propagation in covalent crystals requires a quantum mechanics-based description of individual bond-breaking events. Artificial neural network potentials (NNPs) have emerged to overcome the traditional, physics-based modeling tradeoff between accuracy and accessible time and length scales. Previous studies have shown successful applications of NNPs for describing the structure and dynamics of molecular systems and amorphous or liquid phases of materials. However, their application to deformation and failure processes in materials is still uncommon. In this study, we discuss the apparent limitations of NNPs for the description of deformation and fracture under loadings and propose a way to generate and select training data for their employment in simulations of deformation and fracture simulations of crystals. We applied the proposed approach to 2D crystalline graphene, utilizing the density-functional tight-binding method for more efficient and extensive data generation in place of density functional theory. Then, we explored how the data selection affects the accuracy of the developed artificial NNPs. It revealed that NNP’s reliability should not only be measured based on the total energy and atomic force comparisons for reference structures but also utilize comparisons for physical properties, e.g. stress–strain curves and geometric deformation. In sharp contrast to popular reactive bond order potentials, our optimized NNP predicts straight crack propagation in graphene along both armchair and zigzag (ZZ) lattice directions, as well as higher fracture toughness of ZZ edge direction. Our study provides significant insight into crack propagation mechanisms on atomic scales and highlights strategies for NNP developments of broader materials. read less NOT USED (low confidence) Q. Liu and B. Xu, “Harnessing wrinkling morphologies of graphene on soft substrates for mechanically programmable interfacial thermal conductance,” Nano Research. 2023. link Times cited: 0 NOT USED (low confidence) B. Mortazavi, X. Zhuang, T. Rabczuk, and A. Shapeev, “Atomistic modeling of the mechanical properties: the rise of machine learning interatomic potentials.,” Materials horizons. 2023. link Times cited: 9 Abstract: Since the birth of the concept of machine learning interatom… read moreAbstract: Since the birth of the concept of machine learning interatomic potentials (MLIPs) in 2007, a growing interest has been developed in the replacement of empirical interatomic potentials (EIPs) with MLIPs, in order to conduct more accurate and reliable molecular dynamics calculations. As an exciting novel progress, in the last couple of years the applications of MLIPs have been extended towards the analysis of mechanical and failure responses, providing novel opportunities not heretofore efficiently achievable, neither by EIPs nor by density functional theory (DFT) calculations. In this minireview, we first briefly discuss the basic concepts of MLIPs and outline popular strategies for developing a MLIP. Next, by considering several examples of recent studies, the robustness of MLIPs in the analysis of the mechanical properties will be highlighted, and their advantages over EIP and DFT methods will be emphasized. MLIPs furthermore offer astonishing capabilities to combine the robustness of the DFT method with continuum mechanics, enabling the first-principles multiscale modeling of mechanical properties of nanostructures at the continuum level. Last but not least, the common challenges of MLIP-based molecular dynamics simulations of mechanical properties are outlined and suggestions for future investigations are proposed. read less NOT USED (low confidence) M. Zhang, K. Hibi, and J. Inoue, “GPU-accelerated artificial neural network potential for molecular dynamics simulation,” Comput. Phys. Commun. 2023. link Times cited: 3 NOT USED (low confidence) G. H. Batista, G. Psofogiannakis, C. Junkermeier, and R. Paupitz, “Mechanical properties and deformation-driven band gap tuning on [N]-Carbophenes,” Computational Materials Science. 2023. link Times cited: 1 NOT USED (low confidence) J. Shi, X. Zhou, P. Jia, and K. Cai, “Ion Separation Together with Water Purification via a New Type of Nanotube: A Molecular Dynamics Study,” International Journal of Molecular Sciences. 2023. link Times cited: 2 Abstract: We propose a CNT-based concentric twin tube (CTT) as nanocha… read moreAbstract: We propose a CNT-based concentric twin tube (CTT) as nanochannels for both water purification and ion separation at the nanoscale. In the model, a source reservoir dealing with the solution connects three containers via the CTT that has three subchannels for mass transfer. Before entering the three subchannels, the solution in the separating zone will form three layers (the aqua cations, water, and the aqua anions, respectively) by applying a charged capacitor with the two electrodes parallel to the flow direction of the solution. Under an electric field with moderate intensity, the three subchannels in the CTT have stable configurations for mass transfer. Since the water and the two types of aqua ions are collected by three different containers, the present model can realize both ion separation and water purification. The mass transfer in the subchannels will be sped up by an external pressure exerted on the solution in the source reservoir. The physical properties of the model, e.g., water purification speed, are analyzed with respect to the effects of the electric field, the size of CTT, and the concentration of solute, such as NaCl. read less NOT USED (low confidence) L. H. Tuan and L. Sang, “Annealing coatings of graphene on silicon and application to tribology,” Tribology International. 2023. link Times cited: 1 NOT USED (low confidence) Y. Du, L.-J. Zhou, and J.-G. Guo, “Theoretical and molecular dynamics studies on the negative Poisson’s ratio of graphene regulated by epoxy groups,” Diamond and Related Materials. 2023. link Times cited: 0 NOT USED (low confidence) T. Yu, J. Li, Z. Yang, H. Li, Q. Peng, and H.-K. Tang, “Effects of Crack Formation on the Mechanical Properties of Bilayer Graphene: A Comparative Analysis,” Crystals. 2023. link Times cited: 2 Abstract: We present a molecular dynamics simulation study on the effe… read moreAbstract: We present a molecular dynamics simulation study on the effects of crack formation on the mechanical properties of bilayer graphene. Bilayer graphene possesses unique electronic properties that can be modified by applying a voltage, making it an attractive material for various applications. We examined how the mechanical properties of bilayer graphene vary under various crack configurations and temperatures, measuring Young’s modulus, fracture toughness, fracture strain, and fracture stress. We compared the effect of crack presence on single and both layers and found the appearance of double peaks in the stress–strain curves in the case of a monolayer crack, indicating a subsequent fracture of the cracked layer and the uncracked layer. We also examined the effect of crack shape, size, and orientation on mechanical properties, including circular, hexagonal, and rectangular cracks along two axes. We found that both circular and hexagonal cracks had a smaller Young’s modulus and toughness than rectangular cracks, and the orientation of the crack had a significant impact on the mechanical properties, with a 2.5-times higher toughness for cracks with a length of 15Å. Additionally, we found that Young’s modulus decreases with increasing temperature in bilayer graphene with cracks on both layers. Our findings provide valuable insights into the potential applications of bilayer graphene in the design of advanced nanoscale electronic devices. read less NOT USED (low confidence) D. Li, Y. Liu, and Q. Liu, “Study on Interface Mechanical Properties of Graphene/Copper Matrix Composites,” Applied Sciences. 2023. link Times cited: 0 Abstract: Graphene/copper matrix composites have a wide range of appli… read moreAbstract: Graphene/copper matrix composites have a wide range of application prospects, but the mechanical properties of the interface have been one of the key problems restricting their wide application. In this paper, the mechanical behaviors at the interface of graphene/copper matrix composites, such as pulling up, pulling out, and cohesion, and the effects of temperature and graphene content on them were studied by the molecular dynamics method. The results show that the pull-up force and cohesiveness show two stages in the whole process. The pulling force increases rapidly and then decreases to 0 slowly. The pull-out force shows three stages: it rises rapidly at first, then fluctuates continuously, and finally drops to 0. The mechanical properties of the interface deteriorated with the increase in temperature. When the temperature increased from 0 K to 1100 K, the interface normal strength, shear strength, and cohesion strength of the interface decreased by 26.3%, 32.9%, and 24.8%, respectively. In addition, with the increase in graphene content, the normal strength of the interface increases, the shear strength decreases, and the cohesion strength almost stays the same. When the graphene content increases from 6.71 at% to 11.75 at%, the normal strength increases by 6.8%, while the shear strength decreases by 37.4%. The influence mechanism of temperature and content is explained from the aspects of the influence of atomic thermal motion and the hindering effect of graphene on the dislocation motion of the copper matrix. The relevant results have certain reference values for the engineering application and theoretical research of graphene/copper composites. read less NOT USED (low confidence) H. Yuan, G. Huang, G. Qin, L.-chuan Zhang, Y. Xie, and Y. Chen, “Two-Dimensional Carbon Networks with a Negative Poisson’s Ratio,” Crystals. 2023. link Times cited: 1 Abstract: Low-dimensional materials with a negative Poisson’s ratio (N… read moreAbstract: Low-dimensional materials with a negative Poisson’s ratio (NPR) have attracted lots of attention for their potential applications in aerospace, defense, etc. Although graphene and monolayer h-BN have been reported to have NPR behavior under external strains, the mechanism is not clear, and the critical strains of the occurrence of a NPR are relatively larger. Here, we propose that the origination of the NPR phenomena in the 2D honeycomb structures can be explained by the variation of the zigzag chains under strains. Our calculations clarify that a NPR occurs along the armchair-chain direction rather than the zigzag-chain direction in these materials. Furthermore, a series of two-dimensional carbon networks including zigzag chains have demonstrated that there is NPR phenomena in them. In some of the networks, a NPR can be found under a small external strain. Our study not only deepens the understanding of the origin of NPR in honeycomb systems but also offers guidance to design auxetic nanostructures. read less NOT USED (low confidence) H. Zou, Y. Feng, X. Zhang, T. Ohara, and L. Qiu, “Enhancing mechanism of CNT-CNT interface by metal nanoparticle and nanowire effect on the inside and outside of CNT,” International Journal of Thermal Sciences. 2023. link Times cited: 2 NOT USED (low confidence) S. Mishra, N. Luhadiya, and S. I. Kundalwal, “Atomistic Insights into the H2 Adsorption and Desorption Behavior of Novel Li-Functionalized Polycrystalline Cnts,” SSRN Electronic Journal. 2023. link Times cited: 5 NOT USED (low confidence) K. Čerņevičs, M. Fuechsle, M. Broome, M. Choucair, and O. Yazyev, “Origin of metallic-like behavior in disordered carbon nano-onions,” Carbon. 2023. link Times cited: 0 NOT USED (low confidence) Y. Peng, Z.-an Tian, Q. Zheng, Q. Xie, and T. Gao, “Effect of Graphene Substrate on Melting of Cu Nanoparticles,” SSRN Electronic Journal. 2023. link Times cited: 0 NOT USED (low confidence) F. Wang, L. Li, H. Tang, X. Wang, and Y. Hu, “Damping of aluminum-matrix composite reinforced by carbon nanotube: Multiscale modeling and characteristics,” Science China Technological Sciences. 2023. link Times cited: 4 NOT USED (low confidence) P. Qi, H. Zhu, F. Borodich, and Q. Peng, “A Review of the Mechanical Properties of Graphene Aerogel Materials: Experimental Measurements and Computer Simulations,” Materials. 2023. link Times cited: 3 Abstract: Graphene aerogels (GAs) combine the unique properties of two… read moreAbstract: Graphene aerogels (GAs) combine the unique properties of two-dimensional graphene with the structural characteristics of microscale porous materials, exhibiting ultralight, ultra-strength, and ultra-tough properties. GAs are a type of promising carbon-based metamaterials suitable for harsh environments in aerospace, military, and energy-related fields. However, there are still some challenges in the application of graphene aerogel (GA) materials, which requires an in-depth understanding of the mechanical properties of GAs and the associated enhancement mechanisms. This review first presents experimental research works related to the mechanical properties of GAs in recent years and identifies the key parameters that dominate the mechanical properties of GAs in different situations. Then, simulation works on the mechanical properties of GAs are reviewed, the deformation mechanisms are discussed, and the advantages and limitations are summarized. Finally, an outlook on the potential directions and main challenges is provided for future studies in the mechanical properties of GA materials. read less NOT USED (low confidence) S. Schmitt, F. Fleckenstein, H. Hasse, and S. Stephan, “Comparison of Force Fields for the Prediction of Thermophysical Properties of Long Linear and Branched Alkanes.,” The journal of physical chemistry. B. 2023. link Times cited: 11 Abstract: The prediction of thermophysical properties at extreme condi… read moreAbstract: The prediction of thermophysical properties at extreme conditions is an important application of molecular simulations. The quality of these predictions primarily depends on the quality of the employed force field. In this work, a systematic comparison of classical transferable force fields for the prediction of different thermophysical properties of alkanes at extreme conditions, as they are encountered in tribological applications, was carried out using molecular dynamics simulations. Nine transferable force fields from three different classes were considered (all-atom, united-atom, and coarse-grained force fields). Three linear alkanes (n-decane, n-icosane, and n-triacontane) and two branched alkanes (1-decene trimer and squalane) were studied. Simulations were carried out in a pressure range between 0.1 and 400 MPa at 373.15 K. For each state point, density, viscosity, and self-diffusion coefficient were sampled, and the results were compared to experimental data. The Potoff force field yielded the best results. read less NOT USED (low confidence) V. Panneerselvam, A. Anandakrishnan, and S. P. Sathian, “Modeling the effect of chirality on thermal transport in a pillared-graphene structure.,” Physical chemistry chemical physics : PCCP. 2023. link Times cited: 0 Abstract: The anisotropic heat transport in graphene-CNT based materia… read moreAbstract: The anisotropic heat transport in graphene-CNT based materials provoked the development of three-dimensional pillared-graphene (PG) systems. In this study, we performed non-equilibrium molecular dynamics simulations to analyze PG thermal conductivity and thermal boundary conductance. For the first time, we have considered the influence of pillar chirality and the temperature effect on PG heat transport. We analyzed the influence of pillar chirality and pillar length on the in- and out-of-plane transport properties. For the temperature-dependent analysis, the chosen temperatures were in the range of 100 K to 500 K. To elucidate the mechanism underlying the heat transport, we investigated the phonon density of states (DOS) in the different regions of PG systems. The overlap factor was calculated to quantify the mismatch in the phonon DOS profiles. Across the pillar region, the overlap factor correlates directly with the thermal boundary conductance. When heat is transported in an out-of-plane direction, the zig-zag PG system performs better than the armchair PG system. The atomic arrangement at the graphene-CNT interface plays an inevitable role in limiting heat transport in PG systems. The calculated phonon energy in the zig-zag PG interface is higher than that in the armchair PG interface. read less NOT USED (low confidence) S. Chen, Q.-X. Bai, S. Wang, H. Wang, W. Guo, and Y. Dou, “Surface-Dependent Adhesion Properties of Graphene on Diamonds for the Fabrication of Nanodevices: A Molecular Dynamics Investigation,” ACS Applied Nano Materials. 2023. link Times cited: 2 NOT USED (low confidence) X.-N. Ma et al., “Layer-defect toughened hierarchically structured diamond composites,” Engineering Fracture Mechanics. 2023. link Times cited: 0 NOT USED (low confidence) D. Zhou, C. Li, K. You, and K. Bi, “Superlubricity transition from ball bearing to nanocoating in the third-body lubrication,” Tribology International. 2023. link Times cited: 0 NOT USED (low confidence) J. Li et al., “C60 Filling-Enabled Tribological Improvement of Graphene in Conformal Contact with a Rough Substrate,” SSRN Electronic Journal. 2023. link Times cited: 4 NOT USED (low confidence) X.-L. Li and J.-G. Guo, “Theoretical study on uniaxial compressive mechanical properties of three-dimensional graphene,” International Journal of Mechanical Sciences. 2023. link Times cited: 4 NOT USED (low confidence) A. T. Sose, S. Y. Joshi, L. Kunche, F. Wang, and S. A. Deshmukh, “A review of recent advances and applications of machine learning in tribology.,” Physical chemistry chemical physics : PCCP. 2023. link Times cited: 6 Abstract: In tribology, a considerable number of computational and exp… read moreAbstract: In tribology, a considerable number of computational and experimental approaches to understand the interfacial characteristics of material surfaces in motion and tribological behaviors of materials have been considered to date. Despite being useful in providing important insights on the tribological properties of a system, at different length scales, a vast amount of data generated from these state-of-the-art techniques remains underutilized due to lack of analysis methods or limitations of existing analysis techniques. In principle, this data can be used to address intractable tribological problems including structure-property relationships in tribological systems and efficient lubricant design in a cost and time effective manner with the aid of machine learning. Specifically, data-driven machine learning methods have shown potential in unraveling complicated processes through the development of structure-property/functionality relationships based on the collected data. For example, neural networks are incredibly effective in modeling non-linear correlations and identifying primary hidden patterns associated with these phenomena. Here we present several exemplary studies that have demonstrated the proficiency of machine learning in understanding these critical factors. A successful implementation of neural networks, supervised, and stochastic learning approaches in identifying structure-property relationships have shed light on how machine learning may be used in certain tribological applications. Moreover, ranging from the design of lubricants, composites, and experimental processes to studying fretting wear and frictional mechanism, machine learning has been embraced either independently or integrated with optimization algorithms by scientists to study tribology. Accordingly, this review aims at providing a perspective on the recent advances in the applications of machine learning in tribology. The review on referenced simulation approaches and subsequent applications of machine learning in experimental and computational tribology shall motivate researchers to introduce the revolutionary approach of machine learning in efficiently studying tribology. read less NOT USED (low confidence) K. Yin, L. Shi, Y. Zhong, X. Ma, M. Li, and X. He, “Thermal transport across the CoSb3-graphene interface.,” Physical chemistry chemical physics : PCCP. 2023. link Times cited: 0 Abstract: CoSb3 shows intrinsically excellent electric transport perfo… read moreAbstract: CoSb3 shows intrinsically excellent electric transport performance but high thermal conductivity, resulting in low thermoelectric performance. The use of graphene to form heterogeneous interfaces shows great potential for significantly lessening the lattice thermal conductivity (κL) in CoSb3-based composites. Molecular dynamics (MD) simulations are carried out in the present work to study the interfacial thermal conductance across the CoSb3-graphene interface in the temperature range of 300 K to 800 K. The interfacial thermal conductance exhibits irregular fluctuations with temperature and CoSb3 length. Furthermore, we explored the effect of graphene layers on the interfacial heat transport of the CoSb3-graphene system. The results demonstrate that graphene layers affect the interfacial thermal conductance due to the suppression of heat flux in multilayer graphene across the c-axis. The phonon density of states (PDOS) of the CoSb3-graphene system reveals a decreased low-frequency vibration mode at 0-7 THz and an enhanced high-frequency vibration mode compared with those of CoSb3, indicating that thermal transport can be effectively suppressed by the addition of graphene. read less NOT USED (low confidence) S. Khosravani, M. H. Sadr, E. Carrera, A. Pagani, and A. Sánchez-Majano, “Multi-scale analysis of thermoelastic properties of graphene foam/PDMS composites,” Computational Materials Science. 2023. link Times cited: 3 NOT USED (low confidence) E. Ghavanloo, H. Rafii-Tabar, A. Kausar, G. Giannopoulos, and S. A. Fazelzadeh, “Experimental and computational physics of fullerenes and their nanocomposites: Synthesis, thermo-mechanical characteristics and nanomedicine applications,” Physics Reports. 2023. link Times cited: 6 NOT USED (low confidence) H. Mei, X. Mei, X. He, Z. Bie, Z. Wang, and J. Cui, “Chemical covalent connection of carbon nanotubes for related structural manufacturing: A molecular dynamics study,” Applied Surface Science. 2023. link Times cited: 0 NOT USED (low confidence) A. Khaitan et al., “Characterization of quenched MD simulated porous carbon electrodes for supercapacitors,” Materials Today: Proceedings. 2023. link Times cited: 0 NOT USED (low confidence) S. Nevhal, M. Gupta, and S. I. Kundalwal, “Influence of flexoelectric effect on the bending rigidity of a Timoshenko graphene-reinforced nanorod,” Journal of the Mechanical Behavior of Materials. 2023. link Times cited: 0 Abstract: The focus of this work is to study the influence of flexoele… read moreAbstract: The focus of this work is to study the influence of flexoelectric phenomenon on the electromechanical response of graphene-reinforced nanocomposite (GNC) nanorods. An analytical model has been derived by utilizing the Timoshenko beam theory and the principle of variational work by incorporating flexoelectric effects. The GNC nanorod is subjected to a concentrated load acting downward for clamped-free and simply supported support types. The GNC is reinforced with a defective graphene sheet as it is known to show enhanced polarization. The elastic properties of defective graphene sheets have been evaluated using molecular dynamic simulations. The outcome of our model shows that the flexoelectric effect must be considered for accurate modeling of nanostructures. Irrespective of the support type, flexoelectric effect improves the stiffness of the nanorod. We also observed that the stiffness of the nanorod is significantly influenced by the support type. This work presents an opportunity for the development of high-performance graphene-based nanoactuators/sensors. read less NOT USED (low confidence) J. Baimova and S. Shcherbinin, “Metal/Graphene Composites: A Review on the Simulation of Fabrication and Study of Mechanical Properties,” Materials. 2022. link Times cited: 4 Abstract: Although carbon materials, particularly graphene and carbon … read moreAbstract: Although carbon materials, particularly graphene and carbon nanotubes, are widely used to reinforce metal matrix composites, understanding the fabrication process and connection between morphology and mechanical properties is still not understood well. This review discusses the relevant literature concerning the simulation of graphene/metal composites and their mechanical properties. This review demonstrates the promising role of simulation of composite fabrication and their properties. Further, results from the revised studies suggest that morphology and fabrication techniques play the most crucial roles in property improvements. The presented results can open up the way for developing new nanocomposites based on the combination of metal and graphene components. It is shown that computer simulation is a possible and practical way to understand the effect of the morphology of graphene reinforcement and strengthening mechanisms. read less NOT USED (low confidence) S. Banik et al., “A Continuous Action Space Tree search for INverse desiGn (CASTING) framework for materials discovery,” npj Computational Materials. 2022. link Times cited: 1 NOT USED (low confidence) Z. Li et al., “Ultrastrong conductive in situ composite composed of nanodiamond incoherently embedded in disordered multilayer graphene,” Nature Materials. 2022. link Times cited: 15 NOT USED (low confidence) R. Li, B. An, J. Liu, and Q. Peng, “Modulating Directional Movement of Graphene Nanoflake Using a Channel,” Crystals. 2022. link Times cited: 0 Abstract: The graphene-based nano-mechanical systems have attracted a … read moreAbstract: The graphene-based nano-mechanical systems have attracted a lot of attention due to their unique properties. Owing to its planar shape, it is hard to control the direction of motion of graphene. In this study, a directional system based on graphene with a channel driven by a thermal gradient was examined by means of molecular dynamics simulations. The results showed that the channel could direct the motion and correct the rotation of graphene nanoflakes. The movement of graphene nanoflake not only depended on the interaction between the nanoflake and the substrate, but also the configuration of the graphene in the channel. A larger thermal gradient was needed to drive a hydrogen-passivated graphene nanoflake. However, the movement of a passivated nanoflake was more stable. Our results showed that a passivated graphene nanoflake could move steadily along a direction in a channel, which might shed light on the design of nano-mechanical systems based on graphene. read less NOT USED (low confidence) Z. Javdani et al., “Clogging and Unclogging of Hydrocarbon-Contaminated Nanochannels.,” The journal of physical chemistry letters. 2022. link Times cited: 0 Abstract: The recent advantages of the fabrication of artificial nanoc… read moreAbstract: The recent advantages of the fabrication of artificial nanochannels enabled new research on the molecular transport, permeance, and selectivity of various gases and molecules. However, the physisorption/chemisorption of the unwanted molecules (usually hydrocarbons) inside nanochannels results in the alteration of the functionality of the nanochannels. We investigated contamination due to hydrocarbon molecules, nanochannels made of graphene, hexagonal boron nitride, BC2N, and molybdenum disulfide using molecular dynamics simulations. We found that for a certain size of nanochannel (i.e., h = 0.7 nm), as a result of the anomalous hydrophilic nature of nanochannels made of graphene, the hydrocarbons are fully adsorbed in the nanochannel, giving rise to full uptake. An increasing temperature plays an important role in unclogging, while pressure does not have a significant role. The results of our pioneering work contribute to a better understanding and highlight the important factors in alleviating the contamination and unclogging of nanochannels, which are in good agreement with the results of recent experiments. read less NOT USED (low confidence) H.-N. Zhang, Y. Fan, and H. S. Shen, “Chirality-Dependent and Intrinsic Auxeticity for Single-Walled Carbon Nanotubes,” Materials. 2022. link Times cited: 2 Abstract: Single-walled carbon nanotubes (SWCNTs) have superior mechan… read moreAbstract: Single-walled carbon nanotubes (SWCNTs) have superior mechanical properties which originate from a strong C-C covalent bond and unique nanostructure. Chirality, one of the helical structural parameters of SWCNTs, leads to differences in mechanical performance. In this work, molecular dynamics (MD) simulation was performed to analyze engineering Poisson’s ratio (EPR) and incremental Poisson’s ratio (IPR) of SWCNTs with different chiral angles, respectively, under tensile and compressive load, as well as the chiral effect on rigidity. We reported the minimum EPR for (4, 1) SWCNT and obtained the distribution and trend of EPR which is dependent on chiral index m. In addition, a new observation showed two exactly opposite trends of EPR existing not only in tension and compression but also in the longitudinal and radial directions. Furthermore, we found that the critical strain, over which SWCNT would be auxetic, ranged from 6% to 18% and was also chirality-dependent. Three representative SWCNTs with chiral angle of 0° (zigzag), 10.89° (chiral), and 30° (armchair) were selected for the mechanism study of auxeticity. Finally, a method of the contribution to radial strain for two main deformation modes proposed in this paper could well explain the negative IPR phenomenon. read less NOT USED (low confidence) K. Cai, P. Wu, and Q. Qin, “Local nanoflow field produced by the bladed rotor in a rotation transmission nanosystem in water environments,” Materials Science and Engineering: B. 2022. link Times cited: 0 NOT USED (low confidence) S. Yazdani and V. Vitry, “RSM models approach for optimization of the mechanical properties of electroless Ni-B-nanodiamond coating: An experimental and molecular dynamic simulation study,” Surface and Coatings Technology. 2022. link Times cited: 5 NOT USED (low confidence) G. Tang, F. Su, X. Liu, Z. Liang, T. Zou, and P. Chu, “Origin of superlubricity promoted by black phosphorus dotted with gold nanoparticles,” Applied Surface Science. 2022. link Times cited: 2 NOT USED (low confidence) W. Zhang et al., “Deformation characteristics of solid-state benzene as a step towards understanding planetary geology,” Nature Communications. 2022. link Times cited: 1 NOT USED (low confidence) J. Lu et al., “Molecular Dynamical Investigation of Lithium-Ion Adsorption on Multilayer Fullerene,” Coatings. 2022. link Times cited: 0 Abstract: As the cathode of lithium-ion batteries, carbon material has… read moreAbstract: As the cathode of lithium-ion batteries, carbon material has been the focus of research. At present, diverse investigations have been carried out on the lithium convergence behavior in the carbon material family. As a new carbon material, multilayer fullerenes have been shown in various experimental studies to have a high discharge rate as an electrode, indicating that onion-like carbon has the potential to release energy quickly. Materials and mechanical scientists are increasingly interested in lithium-ion batteries. In this paper, the molecular dynamics (MD) method was used to simulate the absorption of lithium ions by multilayer fullerenes. A model of five layers of fullerenes was established to compare the lithium-ion absorption rates of multiple layers of fullerenes at different lithium-ion concentrations. The effects of the lithium-ion diffusion rate on the results were considered. In addition, the effects of the number of lithium ions, the velocity, and the layer number of multilayer fullerenes on the structural behavior and stress were investigated thoroughly when the multilayer fullerenes adsorbed lithium ions. read less NOT USED (low confidence) A. S. Grossek, A. Niggas, R. Wilhelm, F. Aumayr, and C. Lemell, “Model for Nanopore Formation in Two-Dimensional Materials by Impact of Highly Charged Ions,” Nano Letters. 2022. link Times cited: 5 Abstract: We present a first qualitative description of the atomic dyn… read moreAbstract: We present a first qualitative description of the atomic dynamics in two-dimensional (2D) materials induced by the impact of slow, highly charged ions. We employ a classical molecular dynamics simulation for the motion of the target atoms combined with a Monte Carlo model for the diffusive charge transport within the layer. Depending on the velocity of charge transfer (hopping time or hole mobility) and the number of extracted electrons which, in turn, depends on the charge state of the impinging ions, we find regions of stability of the 2D structure as well as parameter combinations for which nanopore formation due to Coulomb repulsion is predicted. read less NOT USED (low confidence) L. V. Sang, “Graphene Nanoparticles for Ultralow Friction at Extremely High Pressures and Temperatures.,” Langmuir : the ACS journal of surfaces and colloids. 2022. link Times cited: 3 Abstract: This study uses the molecular dynamics approach to design gr… read moreAbstract: This study uses the molecular dynamics approach to design graphene nanoparticles from the graphene sheets seeded randomly and investigates their lubricity. These nanoparticles are found to provide stable lubrication at extremely high pressure and temperature of up to 15 GPa and 2000 K, respectively. From the influences of both nanoparticle and graphene, the friction between the diamond slab and the nanoparticles shows ultralow values of the friction coefficient of 0.0034-0.0162 under 1-15 GPa and 300 K and 0.0065-0.0338 under 300-2000 K and 1 or 10 GPa. Providing stable lubrication and ultralow friction under these conditions is the large advantage of graphene nanoparticles. read less NOT USED (low confidence) O. Arroyo-Gasc’on, R. Fern’andez-Perea, E. S. Morell, C. Cabrillo, and L. Chico, “Universality of moiré physics in collapsed chiral carbon nanotubes,” Carbon. 2022. link Times cited: 1 NOT USED (low confidence) S. G. Levitsky, V. Shunaev, and O. Glukhova, “A Hybrid Nanocomposite Based on the T-Shaped Carbon Nanotubes and Fullerenes as a Prospect Material for Triple-Value Memory Cells,” Materials. 2022. link Times cited: 0 Abstract: Relying on empirical and quantum chemical methods, a hybrid … read moreAbstract: Relying on empirical and quantum chemical methods, a hybrid nanocomposite based on the T-shaped carbon nanotube (CNT) junction and internal fullerene C60 is proposed as a potential triple-value memory cell. The T-shaped CNT provides three potential wells where the internal fullerene can be located. The fullerene can move between these wells under the periodic external electric field, whose strength and frequency parameters are identified. The process of the fullerene’s motion control corresponds to the memory cell write operation. The read operation can be realized by determining the fullerene’s position inside the CNT by estimation of the charge transfer between a fullerene and the CNT’s walls. Calculations took into account such external factors as temperature and air environment. read less NOT USED (low confidence) A. H. Mashhadzadeh, M. Z. Dehaghani, F. Molaie, S. Fooladapanjeh, O. Farzadian, and C. Spitas, “A theoretical insight into the mechanical properties and phonon thermal conductivity of biphenylene network structure,” Computational Materials Science. 2022. link Times cited: 3 NOT USED (low confidence) K. Liang, X. Wang, C. Chow, and D. Lau, “A review of geopolymer and its adsorption capacity with molecular insights: A promising adsorbent of heavy metal ions,” Journal of Environmental Management. 2022. link Times cited: 12 NOT USED (low confidence) C. Park, F. Robinson, and D. Kim, “On the Choice of Different Water Model in Molecular Dynamics Simulations of Nanopore Transport Phenomena,” Membranes. 2022. link Times cited: 0 Abstract: The water transport through nanoporous multilayered graphene… read moreAbstract: The water transport through nanoporous multilayered graphene at 300k is investigated using molecular dynamics (MD) simulation with different water models in this study. We used functionalized and non-functionalized membranes along with five different 3-point rigid water models: SPC (simple point charge), SPC/E (extended simple point charge), TIP3P-FB (transferable intermolecular potential with 3 points—Force Balance), TIP3P-EW (transferable intermolecular potential with 3 points with Ewald summation) and OPC3 (3-point optimal point charge) water models. Based on our simulations with two water reservoirs and a porous multilayered graphene membrane in-between them, it is evident that the water transport varies significantly depending on the water model used, which is in good agreement with previous works. This study contributes to the selection of a water model for molecular dynamics simulations of water transport through multilayered porous graphene. read less NOT USED (low confidence) Y. Zhao, C. Qian, V. Gladkikh, and F. Ding, “Diagram of new carbon materials derived by high-temperature and high-pressure treatment of C60 bulk,” Carbon. 2022. link Times cited: 0 NOT USED (low confidence) Y. Hu, P. Huang, and F. Wang, “Nanopore graphene-tungsten composite with enhanced irradiated helium atoms storage capacity,” Journal of Nuclear Materials. 2022. link Times cited: 1 NOT USED (low confidence) S. L. Vajire et al., “Effect of porosity on the stress–strain response of aluminium nanocomposites: a multiscale approach,” International Journal on Interactive Design and Manufacturing (IJIDeM). 2022. link Times cited: 0 NOT USED (low confidence) A. Brzyska, T. Panczyk, and K. Wolinski, “From Cyclo[18]carbon to the Novel Nanostructures—Theoretical Predictions,” International Journal of Molecular Sciences. 2022. link Times cited: 1 Abstract: In this paper, we present a number of novel pure-carbon stru… read moreAbstract: In this paper, we present a number of novel pure-carbon structures generated from cyclo[18]carbon. Due to the very high reactivity of cyclo[18]carbon, it is possible to link these molecules together to form bigger molecular systems. In our studies, we generated new structures containing 18, 36 and 72 carbon atoms. They are of different shapes including ribbons, sheets and tubes. All these new structures were obtained in virtual reactions driven by external forces. For every reaction, the energy requirement was evaluated exactly when the corresponding transition state was found or it was estimated through our new approach. A small HOMO–LUMO gap in these nanostructures indicates easy excitations and the multiple bonds network indicates their high reactivity. Both of these factors suggest that some potential applications of the new nanostructures are as components of therapeutically active carbon quantum dots, terminal fragments of graphene or carbon nanotubes obtained after fracture or growing in situ in catalytic reactions leading to the formation of carbonaceous materials. read less NOT USED (low confidence) B. Song, K. Cai, J. Shi, and Q. Qin, “Self-assembly for preparing nanotubes from monolayer graphyne ribbons on a carbon nanotube,” Nanotechnology. 2022. link Times cited: 1 Abstract: Graphyne nanotube (GNT), as a promising one-dimensional carb… read moreAbstract: Graphyne nanotube (GNT), as a promising one-dimensional carbon material, attracts extensive attention in recent years. However, the synthesis of GNT is still challenging even in the laboratory. This study reveals the feasibility of fabricating a GNT by self-assembling a monolayer graphyne (GY) ribbon on a carbon nanotube (CNT) via theoretical and numerical analysis. Triggered by the van der Waals force from the CNT, a GY ribbon near the tube first winds upon the tube and then conditionally self-assembles to form a GNT. The self-assembly process and result are heavily influenced by the ambient temperature, which indicates the thermal vibration of the nanosystem. Molecular dynamic simulation results address the temperature range conducive to successful self-assembly. Different types of GNTs, e.g. α-, β-, and γ-GNTs with specified chirality (armchair, zigzag, and chiral), length, and radius, can be obtained via self-assembly by controlling the geometry of the GY ribbons and temperature. The present theoretical understanding is helpful for fabricating GNTs with predefined morphology. read less NOT USED (low confidence) K. Cai, X. Zhou, J. Shi, and Q. Qin, “Water transport behaviors in a CTT-type nanotube system,” Microfluidics and Nanofluidics. 2022. link Times cited: 3 NOT USED (low confidence) H. Jiang, Y. Yu, W. Tang, R. Zhou, W. Shi, and L. Bai, “A molecular dynamics study on the lubrication performance of ionic liquids,” Journal of Materials Science. 2022. link Times cited: 2 NOT USED (low confidence) X. Yang and W. Wang, “Friction characteristics in graphene/MoS2 heterojunction,” Surface Science. 2022. link Times cited: 2 NOT USED (low confidence) A. M. Barboza, L. C. R. Aliaga, D. Faria, and I. Bastos, “Bilayer Graphene Kirigami,” SSRN Electronic Journal. 2022. link Times cited: 1 NOT USED (low confidence) B. Zhang, R. Li, and Q. Peng, “Controlling CNT-Based Nanorotors via Hydroxyl Groups,” Nanomaterials. 2022. link Times cited: 0 Abstract: Nanomotor systems have attracted extensive attention due to … read moreAbstract: Nanomotor systems have attracted extensive attention due to their applications in nanorobots and nanodevices. The control of their response is crucial but presents a great challenge. In this work, the rotating and braking processes of a carbon nanotube (CNT)-based rotor system have been studied using molecular dynamics simulation. The speed of response can be tuned by controlling the ratio of hydroxyl groups on the edges. The ratio of hydroxyl groups is positively correlated with the speed of response. The mechanism involved is that the strong hydrogen bonds formed between interfaces increase the interface interaction. Incremental increase in the hydroxyl group concentration causes more hydrogen bonds and thus strengthens the interconnection, resulting in the enhancement of the speed of response. The phonon density of states analysis reveals that the vibration of hydroxyl groups plays the key role in energy dissipation. Our results suggest a novel routine to remotely control the nanomotors by modulating the chemical environment, including tuning the hydroxyl groups concentration and pH chemistry. read less NOT USED (low confidence) G. Yu, Z. Hu, Y. Gao, and D. Huang, “Molecular dynamics study on the enhancement in hydrogen storage capacity for different types of graphynes through a modification by a joint Na (sodium)‐decoration and B (boron)‐doping technique,” International Journal of Energy Research. 2022. link Times cited: 0 Abstract: Graphynes are potential hydrogen storage materials due to th… read moreAbstract: Graphynes are potential hydrogen storage materials due to their unique acetylene bond structure (C‐C ≡ C‐C), and can be classified into α‐GY, β‐GY, γ‐GY, σ‐GY, GDY, etc., according to the proportion of their involved acetylene bonds. To enhance their hydrogen storage capacities, four typical graphynes (α‐GY, β‐GY, δ‐GY, and GDY) were modified by a joint Na‐decoration and B‐doping technique in this research, and the hydrogen adsorption processes of these modified graphynes were investigated by molecular dynamics simulation to clarify the effects of the structure modification on their hydrogen storage capacities. The results showed that the hydrogen storage capacities of the modified graphynes are larger than those of non‐modified graphynes, and that the joint Na‐decorated and B‐doped α‐GY obtains the largest hydrogen storage capacity of 9.41 wt%. The mechanism of the enhancement of hydrogen storage by the joint Na‐decoration and B‐doping was found to be that the Na‐decoration and B‐doping strengthen the adsorption energy between acetylene bonds and hydrogen atoms. Since the modified α‐GY has satisfactory hydrogen storage capacity, far exceeding the target set by the U.S. Department of Energy (DOE) in 2020 for portable hydrogen storage system, it can be expected to be a potential hydrogen storage material in the future. read less NOT USED (low confidence) Y. Dong, Y. Li, Z. Guo, and J.-W. Jiang, “Acceleration of hollow carbon nanospheres by gas leakage: An efficient nanomotor,” AIP Advances. 2022. link Times cited: 0 Abstract: Nanomotors serve as nanoscale engines by converting various … read moreAbstract: Nanomotors serve as nanoscale engines by converting various energies into mechanical energy. In addition to the huge number of existing nanomotors, we propose a simple nanomotor based on the hollow carbon nanosphere (i.e., fullerene) that is full of gas. We investigate the acceleration of the nanosphere by leakage of gas through a nanopore by molecular dynamics simulations. The nanosphere can be driven to a high speed of 100 m/s under proper simulation conditions, which can be further tuned by temperature, gas density, and pore diameter. We observe rotation of the pore direction during the acceleration process for a nanosphere of different pore diameters. The acceleration process can be well described by the Meshchersky theory. We also simulate the deceleration process of the nanosphere due to the damping force of the gas, which can be analyzed in terms of the kinetic motion of gas molecules. The nanomotor proposed in this work shall be realizable in experiments and may be useful in driving the mechanic motion of fullerenes. read less NOT USED (low confidence) J. Chen and W. Ge, “Computational study on the order-of-magnitude difference in thermal conductivity between graphene and graphane nanoribbons,” Diamond and Related Materials. 2022. link Times cited: 1 NOT USED (low confidence) B. Faria and N. Silvestre, “Mechanical Properties of Phenine Nanotubes,” Extreme Mechanics Letters. 2022. link Times cited: 2 NOT USED (low confidence) J. Chen, “Computational study of the effect of different doping elements on the thermal conduction properties of graphene nanoribbons,” Diamond and Related Materials. 2022. link Times cited: 0 NOT USED (low confidence) H. Xie, Z. Ma, W. Zhang, H. Zhao, and L. Ren, “Probing the atomic-scale origins of anti-friction and wear-resisting in graphene-coated high-entropy alloys,” Materials & Design. 2022. link Times cited: 7 NOT USED (low confidence) H. Yang, Y. Tang, and P. Yang, “Building efficient interfacial property with graphene heterogeneous interface,” International Journal of Mechanical Sciences. 2022. link Times cited: 11 NOT USED (low confidence) L. Safina, J. Baimova, and K. Krylova, “Molecular dynamics study of the mechanical properties and deformation behavior of graphene/metal composites,” Materials Today Physics. 2022. link Times cited: 13 NOT USED (low confidence) C. Tiwary, E. Oliveira, R. S. Ambekar, and D. Galvão, “Schwarzite and Schwarzynes Based Load-Bear Resistant 3d Printed Hierarchical Structures,” SSRN Electronic Journal. 2022. link Times cited: 4 NOT USED (low confidence) A. T. Kleinschmidt, A. X. Chen, T. Pascal, and D. Lipomi, “Computational Modeling of Molecular Mechanics for the Experimentally Inclined,” Chemistry of Materials. 2022. link Times cited: 2 NOT USED (low confidence) P. Zhu, H. Zhang, X. Zhang, W. Cao, and Q. Wang, “Modulating the mass sensitivity of graphene resonators via kirigami,” Nanotechnology. 2022. link Times cited: 0 Abstract: The unique mechanical properties of graphene make it an exce… read moreAbstract: The unique mechanical properties of graphene make it an excellent candidate for resonators. We have used molecule dynamic to simulate the resonance process of graphene. The kirigami approach was introduced to improve the mass sensitivity of graphene sheets. Three geometric parameters governing the resonant frequency and mass sensitivity of Kirigami graphene NEMS were defined. The simulation results show that the closer the kirigami defect is to the center of the drum graphene, the higher the mass sensitivity of the graphene. The kirigami graphene shows up to about 2.2 times higher mass sensitivity compared to pristine graphene. Simultaneously, the kirigami graphene has a higher out-of-plane amplitude and easy access to nonlinear vibrations, leading to higher mass sensitivity. Besides, the kirigami structure can restrict the diffusion of gold atoms on graphene under high initial velocity or large tension condition. It is evident that a reasonable defect design can improve the sensitivity and stability of graphene for adsorption mass. read less NOT USED (low confidence) K. You, C. Li, D. Zhou, and K. Bi, “The piezoelectric effect on the carbon and boron nitride coaxial heteronanotubes resonator,” 2022 IEEE International Conference on Industrial Technology (ICIT). 2022. link Times cited: 0 Abstract: Carbon nanotube(CNT)-based nanoresonators exhibit high sensi… read moreAbstract: Carbon nanotube(CNT)-based nanoresonators exhibit high sensitivity in the mass detection domain, but the difficulty in tuning the resonant characteristics restricts its application. In this paper, we investigate the resonance characteristics and intrinsic dissipation of a CNT and BNNT coaxial heterostructure (CNT@BNNT) via molecular dynamics simulations. Compared with the CNT, the resonance characteristics of CNT@BNNT change with the axial strain variation induced by the electric field. Besides, the intrinsic dissipation of CNT@BNNT, mainly influenced by thermoelastic damping, has a similar variation to resonance characteristics. These interesting features indicate that CNT@BNNT is an excellent resonator with piezoelectrically tunable properties. read less NOT USED (low confidence) A. Aghajamali and A. Karton, “Comprehensive theoretical study of the correlation between the energetic and thermal stabilities for the entire set of 1812 C60 isomers,” Journal of Applied Physics. 2022. link Times cited: 1 Abstract: The thermal stability of fullerenes plays a fundamental role… read moreAbstract: The thermal stability of fullerenes plays a fundamental role in their synthesis and in their thermodynamic and kinetic properties. Here, we perform extensive molecular dynamics (MD) simulations using an accurate machine-learning-based Gaussian Approximation Potential (GAP-20) force field to investigate the energetic and thermal properties of the entire set of 1812 C[Formula: see text] isomers. Our MD simulations predict a comprehensive and quantitative correlation between the relative isomerization energy distribution of the C[Formula: see text] isomers and their thermal fragmentation temperatures. We find that the 1812 C[Formula: see text] isomers span over an energetic range of over 400 kcal mol[Formula: see text], where the majority of isomers ([Formula: see text]85%) lie in the range between 90 and 210 kcal mol[Formula: see text] above the most stable C[Formula: see text]-[Formula: see text] buckminsterfullerene. Notably, the MD simulations show a clear statistical correlation between the relative energies of the C[Formula: see text] isomers and their fragmentation temperature. The maximum fragmentation temperature is 4800 K for the C[Formula: see text]-[Formula: see text] isomer and 3700 K for the energetically least stable isomer, where nearly 80% of isomers lie in a temperature window of 4000–4500 K. In addition, an Arrhenius-based approach is used to map the timescale gap between simulation and experiment and establish a connection between the MD simulations and fragmentation temperatures. read less NOT USED (low confidence) J. Cui, F. Zeng, and B. Yuan, “A comparative study on the interfacial characteristics and tensile behaviors of natural rubber composites reinforced by carbon and boron nitride nanotubes,” Polymer Composites. 2022. link Times cited: 8 NOT USED (low confidence) Y. Hu, K. Jiang, K. Liew, and L.-W. Zhang, “Nanoarray-Embedded Hierarchical Surfaces for Highly Durable Dropwise Condensation,” Research. 2022. link Times cited: 2 Abstract: Durable dropwise condensation of saturated vapor is of signi… read moreAbstract: Durable dropwise condensation of saturated vapor is of significance for heat transfer and energy saving in extensive industrial applications. While numerous superhydrophobic surfaces can promote steam condensation, maintaining discrete microdroplets on surfaces without the formation of a flooded filmwise condensation at high subcooling remains challenging. Here, we report the development of carbon nanotube array-embedded hierarchical composite surfaces that enable ultra-durable dropwise condensation under a wide range of subcooling (ΔTsub = 8 K–38 K), which outperforms existing nanowire surfaces. This performance stems from the combined strategies of the hydrophobic nanostructures that allow efficient surface renewal and the patterned hydrophilic micro frames that protect the nanostructures and also accelerate droplet nucleation. The synergistic effects of the composite design ensure sustained Cassie wetting mode and capillarity-governed droplet mobility (Bond number < 0.055) as well as the large specific volume of condensed droplets, which contributes to the enhanced condensation heat transfer. Our design provides a feasible alternative for efficiently transferring heat in a vapor environment with relatively high temperatures through the tunable multiscale morphology. read less NOT USED (low confidence) J. Tan, Y. Guo, and W. Guo, “Ultralow friction of ion-containing water nanodroplets,” Nano Research. 2022. link Times cited: 3 NOT USED (low confidence) M. Amini, B. Azadegan, H. Akbarzadeh, and R. Gharaei, “The role of carbon allotropes on the radiation resistance of Cu-based nanocomposites: An atomistic, energetic, and thermodynamic perspective,” Computational Materials Science. 2022. link Times cited: 2 NOT USED (low confidence) H. Bai, H. Bao, Y. Li, H. Xu, S. Li, and F. Ma, “One-Dimensional Strain Solitons Manipulated Superlubricity on Graphene Interface.,” The journal of physical chemistry letters. 2022. link Times cited: 1 Abstract: The frictional properties of a uniaxial tensile strained gra… read moreAbstract: The frictional properties of a uniaxial tensile strained graphene interface are studied using molecular dynamics simulations. A misfit interval statistical method (MISM) is applied to characterize the atomistic misfits at the interface and strain soliton pattern. During sliding along both armchair and zigzag directions, the lateral force depends on the ratio of graphene flake length (L) to strain soliton spacing (Ls) and becomes nearly zero when L is an integer multiple of 3Ls. Furthermore, the strain solitons propagate along the armchair sliding direction dynamically, while fission and fusion are repeatedly evidenced along the zigzag sliding direction. The underlying superlubric mechanism is revealed by a single-atom quasi-static model. The cancellation of lateral force for the contacting atoms exhibits a dynamic balance when sliding along the armchair direction but a quasi-static balance along the zigzag direction. A diagram of flake length with respect to tensile strain (L-ε) is proposed to predict the critical condition for the transition from nonsuperlubricity to superlubricity. Our results provide insights on the design of superlubric devices. read less NOT USED (low confidence) H. Xie, Z. Ma, W. Zhang, H. Zhao, and L. Ren, “Strengthening effect of high-entropy alloys endowed by monolayer graphene,” Materials Today Physics. 2022. link Times cited: 7 NOT USED (low confidence) P. Jia, K. Huang, H. Yu, T. Shimada, L. Guo, and T. Kitamura, “A novel atomic J-integral concept beyond conventional fracture mechanics,” Theoretical and Applied Fracture Mechanics. 2022. link Times cited: 0 NOT USED (low confidence) M. Liu et al., “Strength and fracture behaviors of ultralong carbon nanotubes with defects,” Carbon. 2022. link Times cited: 5 NOT USED (low confidence) M. Li et al., “Epoxy composite with metal-level thermal conductivity achieved by synergistic effect inspired by lamian noodles,” Composites Science and Technology. 2022. link Times cited: 4 NOT USED (low confidence) Y. Ma, B. Ding, Y.-L. Chen, and D. Wen, “A novel method to predict nanofilm morphology on arbitrary-topographical substrate,” International Journal of Mechanical Sciences. 2022. link Times cited: 3 NOT USED (low confidence) M. Makwana et al., “Effect of Mass on the Dynamic Characteristics of Single- and Double-Layered Graphene-Based Nano Resonators,” Materials. 2022. link Times cited: 6 Abstract: Graphene has been widely and extensively used in mass sensin… read moreAbstract: Graphene has been widely and extensively used in mass sensing applications. The present study focused on exploring the use of single-layer graphene (SLG) and double-layer graphene (DLG) as sensing devices. The dynamic analysis of SLG and DLG with different boundary conditions (BDs) and length was executed using the atomistic finite element method (AFEM). SLG and DLG sheets were modelled and considered as a space–frame structure similar to a 3D beam. Spring elements (Combin14) were used to identify the interlayer interactions between two graphene layers in the DLG sheet due to the van der Waals forces. Simulations were carried out to visualize the behavior of the SLG and DLG subjected to different BDs and when used as mass sensing devices. The variation in frequency was noted by changing the length and applied mass of the SLGs and DLGs. The quantity of the frequency was found to be highest in the armchair SLG (6, 6) for a 50 nm sheet length and lowest in the chiral SLG (16, 4) for a 20 nm sheet length in the bridged condition. When the mass was 0.1 Zg, the frequency for the zigzag SLG (20, 0) was higher in both cases. The results show that the length of the sheet and the various mass values have a significant impact on the dynamic properties. The present research will contribute to the ultra-high frequency nano-resonance applications. read less NOT USED (low confidence) W. Xu, Y. Kai, K. Zhang, and B. Zheng, “Macro and micro methodologies for thermomechanical mirror buckling of freestanding graphene membranes,” Materials Today Communications. 2022. link Times cited: 1 NOT USED (low confidence) B. Ni et al., “Fracture at the two-dimensional limit,” MRS Bulletin. 2022. link Times cited: 4 Abstract: More than a century ago, A.A. Griffith published the seminal… read moreAbstract: More than a century ago, A.A. Griffith published the seminal paper establishing the foundational framework for fracture mechanics. The elegant theory creatively introduced the concepts of elastic energy and surface energy to the science of fracture, and solved the problem of brittle fracture of glass materials. Many subsequent milestone studies in fracture mechanics were motivated by the real problems encountered in different materials. The emergence of two-dimensional (2D) materials provides an exciting opportunity to examine fracture processes at the 2D limit. An important question to be addressed is whether the classic Griffith theory is still applicable to 2D materials. Therefore, recent progress in both experimental and theoretical studies of fracture of 2D materials will be briefly reviewed, with new developments and discoveries in relevant techniques and theories highlighted. Given the early stage of exploring fracture behaviors in 2D materials, more emphasis will be placed on challenges and opportunities for this budding field. Graphical abstract read less NOT USED (low confidence) Y. D. Fomin, “Molecular Simulation of the Formation of Carbon Nanoparticles,” Nanobiotechnology Reports. 2022. link Times cited: 0 NOT USED (low confidence) E. Kouroshian, V. Parvaneh, and M. Abbasi, “Multi-scale modeling of an atomic force microscope tip for the study of frictional properties and oscillation behavior,” Proceedings of the Institution of Mechanical Engineers, Part C: Journal of Mechanical Engineering Science. 2022. link Times cited: 0 Abstract: In this paper, the vibrational behavior of the atomic force … read moreAbstract: In this paper, the vibrational behavior of the atomic force microscope (AFM) on a graphene sheet sample was analyzed using a multi-scale model. The cantilever and silicone tip base were simulated using continuum mechanics and finite element modeling, while the tip apex was modeled using Tersoff potential and structural mechanics modeling. The modified Morse potential was used to model the single-layer graphene, and the Lennard-jones potential was employed as nonlinear springs to model the interactions between the graphene layers and the tip-sample. In addition, the contact behavior between the tip and graphene was investigated by measuring the friction force during the movement of the tip on the graphene sheet, and the results were compared to those obtained from a molecular dynamics simulation and an experimental test. The friction force between the tip and graphene increased by enhancing the tip radius and the contact surface between the tip and the sample. With the initial distance displacement of the tip from the sample, two curves of the tip oscillation amplitude variations and the tip oscillation and excitation vibration phase shift were plotted. In conclusion, the results of the present multi-scale model are compared with those of the MD simulation and demonstrate the strong correlation between the proposed model and the MD model. read less NOT USED (low confidence) J. Zhou et al., “Graphene Layer Number-Dependent Heat Transport across Nickel/Graphene/Nickel Interfaces.,” ACS applied materials & interfaces. 2022. link Times cited: 4 Abstract: As a typical two-dimensional material, graphene (Gr) has sho… read moreAbstract: As a typical two-dimensional material, graphene (Gr) has shown great potential to be used in thermal management applications due to its ultrahigh in-plane thermal conductivity (k). However, low interface thermal conductance (ITC) between Gr and metals to a large extent limits the effective heat dissipation in Gr-based devices. Therefore, having a deep understanding on heat transport at Gr-metal interfaces is essential. Because of the semimetallic nature of Gr, electrons would possibly play a role in the heat transport across Gr-metal interfaces as heat carriers, whereas, However, how much the electron can participate in this process and how to optimize the total ITC considering both electron and phonon transportations have not yet been revealed yet. Therefore, in this work, hydrogenation-treated Gr (H-Gr) was sandwiched by nickel (Ni) nanofilms to compare with the samples containing pure Gr for investigating the interfacial electron behaviors. Moreover, both Gr and H-Gr sets of the samples were prepared with different layer numbers (N) ranging from 1 to 7, and the corresponding ITC was systematically studied based on both time-domain thermoreflectance measurements and theoretical calculations. We found that a larger ITC can be obtained when N is low, and the ITC may reach a peak value when N is 2 in certain circumstances. The present findings not only provide a comprehensive understanding on heat transport across Gr-metal interfaces byconsidering a combined effect of the interfacial interaction strength, phonon mode mismatch, and electron contributions, but also shed new lights on interface strucure optimiazations of Gr-based devices. read less NOT USED (low confidence) S. Zhao, Y. Zhang, Y. Zhang, W. Zhang, J. Yang, and S. Kitipornchai, “Data-driven modeling for thermo-elastic properties of vacancy-defective graphene reinforced nanocomposites with its application to functionally graded beams,” Engineering with Computers. 2022. link Times cited: 4 NOT USED (low confidence) J. Wang, C. Li, Y. Sheng, Y. Su, and L. Yang, “Cross-scale investigation of the size effect on thermal conductivity of monolayer graphene,” Applied Physics Letters. 2022. link Times cited: 1 Abstract: It is known that the intrinsic thermal conductivity of a mon… read moreAbstract: It is known that the intrinsic thermal conductivity of a monolayer graphene highly depends on its in-plane dimensions which are at nanoscale. However, it remains not very clear how the thermal conductivity is quantitatively affected as the considered in-plane size undergoes a cross-scale variation, especially when temperature influence is involved. In this study, based on the ballistic-diffusion approximation theory, we propose a cross-scale model that can be used to calculate the thermal conductivity of monolayer graphene with prescribed length and width at selected temperatures by considering the temperature-dependent diffusive thermal conductivity (fitted from equilibrium molecular dynamics simulations). Then, the effects of the length, width, and temperature on the thermal conductivity of square-shaped and rectangular-shaped graphene are investigated separately. It shows that as the graphene length increases from the nanoscale to microscale, the thermal transport in square graphene will experience these three phonon thermal transport regimes in sequence (ballistic, quasi ballistic, and diffusive), corresponding to a rapid rise of the thermal conductivity, then a slower increase, and, eventually, a near-constant value, respectively. As the rectangular graphene gradually becomes square, the difference in the thermal conductivity in length and width directions will vanish due to the weakening of the boundary scattering. In addition, the thermal conductivity significantly drops with temperature increases because of the strong Umklapp scattering caused by high temperature. read less NOT USED (low confidence) A. Okmi et al., “Discovery of Graphene‐Water Membrane Structure: Toward High‐Quality Graphene Process,” Advanced Science. 2022. link Times cited: 4 Abstract: It is widely accepted that solid‐state membranes are indispe… read moreAbstract: It is widely accepted that solid‐state membranes are indispensable media for the graphene process, particularly transfer procedures. But these membranes inevitably bring contaminations and residues to the transferred graphene and consequently compromise the material quality. This study reports a newly observed free‐standing graphene‐water membrane structure, which replaces the conventional solid‐state supporting media with liquid film to sustain the graphene integrity and continuity. Experimental observation, theoretical model, and molecular dynamics simulations consistently indicate that the high surface tension of pure water and its large contact angle with graphene are essential factors for forming such a membrane structure. More interestingly, water surface tension ensures the flatness of graphene layers and renders high transfer quality on many types of target substrates. This report enriches the understanding of the interactions on reduced dimensional material while rendering an alternative approach for scalable layered material processing with ensured quality for advanced manufacturing. read less NOT USED (low confidence) K. You, C. Li, D. Zhou, and K. Bi, “A piezoelectrically tunable resonator based on carbon and boron nitride coaxial heteronanotubes,” Applied Physics A. 2022. link Times cited: 3 NOT USED (low confidence) T. Liu et al., “Graphene-based woven filter membrane with excellent strength and efficiency for water desalination,” Desalination. 2022. link Times cited: 11 NOT USED (low confidence) M. Z. Dehaghani, O. Farzadian, K. Kostas, F. Molaei, C. Spitas, and A. H. Mashhadzadeh, “Theoretical study of heat transfer across biphenylene/h-BN superlattice nanoribbons,” Physica E: Low-dimensional Systems and Nanostructures. 2022. link Times cited: 4 NOT USED (low confidence) Y. Fan and H. S. Shen, “Non-symmetric stiffness of origami-graphene metamaterial plates,” Composite Structures. 2022. link Times cited: 10 NOT USED (low confidence) G. Wei, S. Hu, G. Cai, Z. Chen, C. Jiang, and F. Ren, “Carbon nanomaterials in nickel and iron helping to disperse or release He atoms,” Materials Today Communications. 2022. link Times cited: 2 NOT USED (low confidence) L. Galiakhmetova, I. Pavlov, A. Bayazitov, I. Kosarev, and S. Dmitriev, “Mechanical Properties of Cubene Crystals,” Materials. 2022. link Times cited: 5 Abstract: The fullerene family, whose most popular members are the sph… read moreAbstract: The fullerene family, whose most popular members are the spherical C60 and C70 molecules, has recently added a new member, the cube-shaped carbon molecule C8 called a cubene. A molecular crystal based on fullerenes is called fullerite. In this work, based on relaxational molecular dynamics, two fullerites based on cubenes are described for the first time, one of which belongs to the cubic system, and the other to the triclinic system. Potential energy per atom, elastic constants, and mechanical stress components are calculated as functions of lattice strain. It has been established that the cubic cubene crystal is metastable, while the triclinic crystal is presumably the crystalline phase in the ground state (the potential energies per atom for these two structures are −0.0452 and −0.0480 eV, respectively).The cubic phase has a lower density than the monoclinic one (volumes per cubene are 101 and 97.7 Å3). The elastic constants for the monoclinic phase are approximately 4% higher than those for the cubic phase. The presented results are the first step in studying the physical and mechanical properties of C8 fullerite, which may have potential for hydrogen storage and other applications. In the future, the influence of temperature on the properties of cubenes will be analyzed. read less NOT USED (low confidence) A. Gamboa-Suárez, H. Y. Seuret-Hernández, and J.-M. Leyssale, “Mechanical properties of pristine and nanocrystalline graphene up to ultra-high temperatures,” Carbon Trends. 2022. link Times cited: 2 NOT USED (low confidence) L. Miao et al., “Anisotropic Tensile Mechanics of Vertically Aligned Carbon Nanotube Reinforced Silicon Carbide Ceramic Nanocomposites,” SSRN Electronic Journal. 2022. link Times cited: 0 NOT USED (low confidence) T. N. Y. Silva and A. F. Fonseca, “High performance of carbon nanotube elastocaloric refrigerators over a large temperature span,” Physical Review B. 2022. link Times cited: 2 Abstract: : Compression of greenhouse gases still dominates the market… read moreAbstract: : Compression of greenhouse gases still dominates the market of refrigeration devices. Although well stablished and efficient, this technology is neither safe for the environment nor able to be scaled down to nanoscale. Solid-state cooling technologies are being developed to overcome these limitations, including studies at nanoscale. Among them, the so-called elastocaloric effect (eC) consists of the thermal response, T , of a material under strain deformation. In this work, fully atomistic molecular dynamics simulations of the eC in carbon nanotubes (CNTs) are presented over a large temperature span. The efficiency of the CNTs as solid refrigerators is investigated by simulating their eC in a model of refrigerator machine running under Otto-like thermodynamic cycles (two adiabatic expansion/contraction plus two isochoric heat exchange processes) operating at temperatures, T O , ranging from 300 to 2000 K. The coefficient-of-performance (COP), defined as the ratio of heat removed from the cold to the total work performed by the system per thermodynamic cycle, is calculated for each value of T O . Our results show a non-linear dependence of T on T O , reaching a minimum value of about 30 K for T O between 500 and 600 K, then growing and converging to a linear dependence on T O for large temperatures. The COP of CNTs is shown to remain about the same and approximately equal to 8. These results are shown to be weakly depend on CNT diameter and chirality but not on length. The isothermal entropy change of the CNTs due to the eC is also estimated and shown to depend non-linearly on T O values. These results predict that CNTs can be considered versatile nanoscale solid refrigerators able to efficiently work over a large temperature read less NOT USED (low confidence) N. Kamanina, A. Toikka, and D. Kvashnin, “Nanostructuration Impact on the Basic Properties of the Materials: Novel Composite Carbon Nanotubes on a Copper Surface,” Journal of Composites Science. 2022. link Times cited: 2 Abstract: Copper is important material that is widely applicable in th… read moreAbstract: Copper is important material that is widely applicable in the electric and electronic industries. Nevertheless, in some circumstances, it is highly desirable to improve its properties. Therefore, combination of materials of various composition and properties attracts scientific and industrial society. Here, the composite based on carbon nanotubes (CNTs) on a Cu surface was fabricated using laser-oriented deposition (LOD) technique and studied. Examination of the novel composite showed that its reflectance was decreased, the microhardness was increased, and wetting of the surface exhibited higher hydrophobicity. A molecular dynamic simulation showed that the penetration depth increases with nanotube diameter decrease and growth of the acceleration rate. Topography observations made via AFM images revealed a dense thin film with an almost-homogeneous distribution of CNTs, with several locations with irregular thickness addressing the different lengths of CNTs. read less NOT USED (low confidence) P. Li et al., “Measuring Thermal Conductivity of an Individual Carbon Nanotube Using Raman Spectroscopy,” Journal of Thermal Science. 2022. link Times cited: 1 NOT USED (low confidence) R. Bahru, M. Zamri, A. Shamsuddin, and M. A. Mohamed, “Simulation design for thermal model from various materials in electronic devices: A review,” Numerical Heat Transfer, Part A: Applications. 2022. link Times cited: 3 Abstract: The heat transfer performance in materials to remove heat is… read moreAbstract: The heat transfer performance in materials to remove heat is attained in various designs according to the devices’ design. Simulation studies are comprising of heat transfer knowledge in detail suit the theories and applications. This review provides an understanding of the simulation work focusing on the heat transfer in the various design of electronic devices. This discussion begins with a briefing on the simulation principle and current focus. Then, the review continues by explaining various simulation methods that exhibit recent heat transfer analysis. The properties of simulation studies are also summarized in detail to understand the significant properties that impact analysis. The application of simulation in thermal model is looked forward to obtain significant heat transfer improvement and impactful research direction. This review also provides insights into challenges in simulation work with available opportunities to solve the heat transfer issue by understanding fundamental knowledge. read less NOT USED (low confidence) M. Motamedi, A. Mehrvar, and M. Nikzad, “Statistical modelling and optimization of AL/CNT composite using response surface-desirability approach,” Computational Particle Mechanics. 2022. link Times cited: 1 NOT USED (low confidence) Y. Hu, P. Huang, and F. Wang, “Graphene distribution and structural integrity dependent irradiation resistance of graphene/tungsten composites,” Materials Today Communications. 2022. link Times cited: 4 NOT USED (low confidence) S. Zhao, Y. Zhang, Y. Zhang, W. Zhang, J. Yang, and S. Kitipornchai, “Buckling of functionally graded hydrogen-functionalized graphene reinforced beams based on machine learning-assisted micromechanics models,” European Journal of Mechanics - A/Solids. 2022. link Times cited: 14 NOT USED (low confidence) J. Shi et al., “Effects of Tearing Conditions on the Crack Propagation in a Monolayer Graphene Sheet,” International Journal of Molecular Sciences. 2022. link Times cited: 2 Abstract: The path of crack propagation in a graphene sheet is signifi… read moreAbstract: The path of crack propagation in a graphene sheet is significant for graphene patterning via the tearing approach. In this study, we evaluate the fracture properties of pre-cracked graphene during the tearing process, with consideration of the effects of the aspect ratio, loading speed, loading direction, and ambient temperatures on the crack propagation in the monolayer sheet. Some remarkable conclusions are drawn based on the molecular dynamic simulation results, i.e., a higher loading speed may result in a complicated path of crack propagation, and the propagation of an armchair crack may be accompanied by sp carbon links at high temperatures. The reason for this is that the stronger thermal vibration reduces the load stress difference near the crack tip and, therefore, the crack tip can pass through the sp link. A crack propagates more easily along the zigzag direction than along the armchair direction. The out-of-plane tearing is more suitable than the in-plane tearing for graphene patterning. The path of crack propagation can be adjusted by changing the loading direction, e.g., a rectangular graphene ribbon can be produced by oblique tearing. This new understanding will benefit the application of graphene patterning via the tearing approach. read less NOT USED (low confidence) G. Wang, G. Zhao, J. Song, and Q. Ding, “Study on tribological properties of TMDs-coated copper from the nanoscale,” Materials Today Communications. 2022. link Times cited: 5 NOT USED (low confidence) Y. Du, L.-J. Zhou, and J.-G. Guo, “Investigation on micro-mechanism of strain-induced and defect-regulated negative Poisson’s ratio of graphene,” Materials Chemistry and Physics. 2022. link Times cited: 4 NOT USED (low confidence) E. Wu, C. Schneider, R. Walz, and J. Park, “Adsorption of Hydrogen Isotopes on Graphene,” Nuclear Engineering and Technology. 2022. link Times cited: 1 NOT USED (low confidence) H.-Y. Xie, Z. Ma, H. Zhao, and L. Ren, “Atomic perspective of contact protection in graphene-coated high-entropy films,” Tribology International. 2022. link Times cited: 10 NOT USED (low confidence) O. Farzadian, M. Z. Dehaghani, K. Kostas, A. H. Mashhadzadeh, and C. Spitas, “A theoretical insight into phonon heat transport in graphene/biphenylene superlattice nanoribbons: a molecular dynamic study,” Nanotechnology. 2022. link Times cited: 9 Abstract: Manipulating the thermal conductivity of nanomaterials is an… read moreAbstract: Manipulating the thermal conductivity of nanomaterials is an efficacious approach to fabricate tailor-made nanodevices for thermoelectric applications. To this end, superlattice nanostructures can be used to achieve minimal thermal conductivity for the employed nanomaterials. Two-dimensional biphenylene is a recently-synthesized sp2-hybridized allotrope of carbon atoms that can be employed in superlattice nanostructures and therefore further investigation in this context is due. In this study, we first determined the thermal conductivity of biphenylene at 142.8 W mK−1 which is significantly lower than that of graphene. As a second step, we studied the effect of the superlattice period ( lp ) on thermal conductivities of the employed graphene/biphenylene superlattice nanoribbons, using molecular dynamics simulations. We calculated a minimum thermal conductivity of 105.5 W mK−1 at lp = 5.066 nm which indicates an achieved thermal conductivity reduction of approximately 97% and 26% when compared to pristine graphene and biphenylene, respectively. This superlattice period denotes the phonon coherent length at which the wave-like behavior of phonons starts prevailing over the particle-like behavior. Finally, the effects of temperature and temperature gradient on the thermal conductivity of superlattice were also investigated. read less NOT USED (low confidence) A. L. Nguyen, W. Liu, K. Khor, A. Nanetti, and S. Cheong, “The emergence of graphene research topics through interactions within and beyond,” Quantitative Science Studies. 2022. link Times cited: 1 Abstract: Scientific research is an essential stage of the innovation … read moreAbstract: Scientific research is an essential stage of the innovation process. However, it remains unclear how a scientific idea becomes applied knowledge and, after that, a commercial product. This paper describes a hypothesis of innovation based on the emergence of new research fields from more mature research fields after interactions between the latter. We focus on graphene, a rising field in materials science, as a case study. First, we used a coclustering method on titles and abstracts of graphene papers to organize them into four meaningful and robust topics (theory and experimental tests, synthesis and functionalization, sensors, and supercapacitors and electrocatalysts). We also demonstrated that they emerged in the order listed. We then tested all topics against the literature on nanotubes and batteries, and the possible parent fields of theory and experimental tests, as well as supercapacitors and electrocatalysts. We found incubation signatures for all topics in the nanotube papers collection and weaker incubation signatures for supercapacitors and electrocatalysts in the battery papers collection. Surprisingly, we found and confirmed that the 2004 breakthrough in graphene created a stir in both the nanotube and battery fields. Our findings open the door for a better understanding of how and why new research fields coalesce. read less NOT USED (low confidence) S. Nasiri, G. Yang, E. Spiecker, and Q. Li, “An Improved Approach to Manufacture Carbon Nanotube Reinforced Magnesium AZ91 Composites with Increased Strength and Ductility,” Metals. 2022. link Times cited: 3 Abstract: Multiwalled carbon nanotubes (MWCNTs) are decorated with Pt … read moreAbstract: Multiwalled carbon nanotubes (MWCNTs) are decorated with Pt nanoparticles by a “layer-by-layer” approach using poly (sodium 4-styrene sulfonate) (PSS) and poly (diallyl dimethylammonium chloride) (PDDA). Transmission electron microscopy (TEM) images and Energy Dispersive X-ray (EDX) analysis of the samples confirm Pt deposition on surfaces of CNTs. Dispersibility and dispersion stability of MWCNTs in the solvents are enhanced when MWCNTs are coated with Pt nanoparticles. Mg AZ91 composites reinforced with MWCNTs are then produced by a melt stirring process. Compression tests of the composites show that adding 0.05% wt Pt-coated MWCNTs in AZ91 improves the composite’s mechanical properties compared to the pure AZ91 and pristine MWCNT/AZ91. Fracture surface analysis of the composite using a scanning electron microscope (SEM) shows individual pulled out MWCNTs in the case of the Pt-coated MWCNT/AZ91 composites. This finding can be attributed to the uniform dispersion of Pt-coated MWCNTs in Mg due to the improved wettability of Pt-coated MWCNTs in Mg melts. The study of the pull-out behaviour of pristine and Pt-coated CNTs from an Mg matrix using molecular dynamics simulation supports this interpretation. read less NOT USED (low confidence) E. Minamitani, T. Shiga, M. Kashiwagi, and I. Obayashi, “Relationship between local coordinates and thermal conductivity in amorphous carbon,” Journal of Vacuum Science & Technology A. 2022. link Times cited: 3 Abstract: To determine the correlation between local structure and the… read moreAbstract: To determine the correlation between local structure and thermal conductivity of amorphous carbon, we investigated heat conduction in 216-atom systems with different densities (2.0–3.4 g/cm3) using the ab initio molecular dynamics approach. By applying the Allen–Feldman theory with interatomic force constants from ab initio calculations, we report a significant correlation between the thermal conductivity and the density. To clarify which structural characteristics in the high- and low-density cases determine the magnitude of thermal conductivity, we performed geometrical and topological analyses. Coordination number analysis and ring statistics revealed that the sp/sp2/sp3 bond ratios and topological characteristics correlate with density. We also demonstrated that these structural characteristics can be quantified using persistent homology analysis, providing a predictive model of thermal conductivity. read less NOT USED (low confidence) A. Materialia, F. Arca, J. P. Mendez, M. Ortiz, and M. P. Ariza, “Strain-tuning of transport gaps and semiconductor-to-conductor phase transition in twinned graphene,” Acta Materialia. 2022. link Times cited: 0 NOT USED (low confidence) Y. Xiang, X. Wang, H. Shi, X. Hu, C. Xu, and Q. Zhang, “Decipher the ultra-high strengthening and toughening efficiency of GNS-MgO/Mg layered composite with in-situ enhanced interface,” Carbon. 2022. link Times cited: 4 NOT USED (low confidence) B. Mousavi, A. Sadeghirad, and V. Lotfi, “A computational investigation of applicability of nonlinear fracture mechanics in nano-scale fracture of graphene,” Materials Today Communications. 2022. link Times cited: 4 NOT USED (low confidence) K. Cai, P. Wu, J. Shi, Z. Zhong, and Y. Zhang, “CNT-motor driven by competition between thermal fluctuation and REF,” International Journal of Mechanical Sciences. 2022. link Times cited: 4 NOT USED (low confidence) M. A. Rahman, C. Dionne, and A. Giri, “Pore Size Dictates Anisotropic Thermal Conductivity of Two-Dimensional Covalent Organic Frameworks with Adsorbed Gases.,” ACS applied materials & interfaces. 2022. link Times cited: 11 Abstract: Two-dimensional covalent organic frameworks (2D COFs) are a … read moreAbstract: Two-dimensional covalent organic frameworks (2D COFs) are a class of modular polymeric crystals with high porosities and large surface areas, which position them as ideal candidates for applications in gas storage and separation technologies. In this work, we study the influence of pore geometry on the anisotropic heat transfer mechanisms in 2D COFs through systematic atomistic simulations. More specifically, by studying COFs with varying pore sizes and gas densities, we demonstrate that the cross-plane thermal conductivity along the direction of the laminar pores can either be decreased due to solid-gas scattering (for COFs with relatively smaller pores that are ≲2 nm) or increased due to additional heat transfer pathways introduced by the gas adsorbates (for COFs with relatively larger pores). Our simulations on COF/methane systems reveal the intricate relationship among gas diffusivities, pore geometries, and solid-gas interactions dictating the modular thermal conductivities in these materials. Along with the understanding of the fundamental nature of gas diffusion and heat conduction in the porous framework crystals, our results can also help guide the design of efficient 2D polymeric crystals for applications with improved gas storage, catalysis, and separation capabilities. read less NOT USED (low confidence) Y. Li et al., “Symmetry Breaking and Anomalous Conductivity in a Double-Moiré Superlattice.,” Nano letters. 2022. link Times cited: 9 Abstract: In a two-dimensional moiré superlattice, the atomic reconstr… read moreAbstract: In a two-dimensional moiré superlattice, the atomic reconstruction of constituent layers could introduce significant modifications to the lattice symmetry and electronic structure at small twist angles. Here, we employ conductive atomic force microscopy to investigate a twisted trilayer graphene double-moiré superlattice. Two sets of moiré superlattices are observed. At neighboring domains of the large moiré, the current exhibits either 2- or 6-fold rotational symmetry, indicating delicate symmetry breaking beyond the rigid model. Moreover, an anomalous current appears at the "A-A" stacking site of the larger moiré, contradictory to previous observations on twisted bilayer graphene. Both behaviors can be understood by atomic reconstruction, and we also show that the measured current is dominated by the tip-graphene contact resistance that maps the local work function qualitatively. Our results reveal new insights of atomic reconstruction in novel moiré superlattices and opportunities for manipulating exotic quantum states on the basis of twisted van der Waals heterostructures. read less NOT USED (low confidence) Y. Zhou et al., “Unusual Deformation and Fracture in Gallium Telluride Multilayers,” The Journal of Physical Chemistry Letters. 2022. link Times cited: 8 Abstract: The deformation and fracture mechanism of two-dimensional (2… read moreAbstract: The deformation and fracture mechanism of two-dimensional (2D) materials are still unclear and not thoroughly investigated. Given this, mechanical properties and mechanisms are explored on example of gallium telluride (GaTe), a promising 2D semiconductor with an ultrahigh photoresponsivity and a high flexibility. Hereby, the mechanical properties of both substrate-supported and suspended GaTe multilayers were investigated through Berkovich-tip nanoindentation instead of the commonly used AFM-based nanoindentation method. An unusual concurrence of multiple pop-in and load-drop events in loading curve was observed. Theoretical calculations unveiled this concurrence originating from the interlayer-sliding mediated layers-by-layers fracture mechanism in GaTe multilayers. The van der Waals force dominated interlayer interactions between GaTe and substrates was revealed much stronger than that between GaTe interlayers, resulting in the easy sliding and fracture of multilayers within GaTe. This work introduces new insights into the deformation and fracture of GaTe and other 2D materials in flexible electronics applications. read less NOT USED (low confidence) B. Wang, Q. Cao, W. Shao, and Z. Cui, “Effect of vacancy defects on the heat transfer coefficient of partially stacked graphene sheets,” Journal of Materials Science. 2022. link Times cited: 3 NOT USED (low confidence) M. Müser, S. Sukhomlinov, and L. Pastewka, “Interatomic potentials: achievements and challenges,” Advances in Physics: X. 2022. link Times cited: 12 Abstract: ABSTRACT Interatomic potentials approximate the potential en… read moreAbstract: ABSTRACT Interatomic potentials approximate the potential energy of atoms as a function of their coordinates. Their main application is the effective simulation of many-atom systems. Here, we review empirical interatomic potentials designed to reproduce elastic properties, defect energies, bond breaking, bond formation, and even redox reactions. We discuss popular two-body potentials, embedded-atom models for metals, bond-order potentials for covalently bonded systems, polarizable potentials including charge-transfer approaches for ionic systems and quantum-Drude oscillator models mimicking higher-order and many-body dispersion. Particular emphasis is laid on the question what constraints ensue from the functional form of a potential, e.g., in what way Cauchy relations for elastic tensor elements can be violated and what this entails for the ratio of defect and cohesive energies, or why the ratio of boiling to melting temperature tends to be large for potentials describing metals but small for short-ranged pair potentials. The review is meant to be pedagogical rather than encyclopedic. This is why we highlight potentials with functional forms sufficiently simple to remain amenable to analytical treatments. Our main objective is to provide a stimulus for how existing approaches can be advanced or meaningfully combined to extent the scope of simulations based on empirical potentials. Graphical abstract read less NOT USED (low confidence) A. Delcorte, “A Microscopic View of Macromolecule Transfer in the Vacuum Using Gas and Bismuth Clusters,” The Journal of Physical Chemistry C. 2022. link Times cited: 6 NOT USED (low confidence) V. Varadharajan, S. Dyanatkar, and G. Beltrame, “Hierarchical Control of Smart Particle Swarms,” ArXiv. 2022. link Times cited: 3 Abstract: We present a method for the control of robot swarms using tw… read moreAbstract: We present a method for the control of robot swarms using two subsets of robots: a larger group of simple, oblivious robots (which we call the workers) that is governed by simple local attraction forces, and a smaller group (the guides) with sufficient mission knowledge to create and displace a desired worker formation by operating on the local forces of the workers. The guides coordinate to shape the workers like smart particles by changing their interaction parameters. We study the approach with a large scale experiment in a physics based simulator with up to 5000 robots forming three different patterns. Our experiments reveal that the approach scales well with increasing robot numbers, and presents little pattern distortion. We evaluate the approach on a physical swarm of robots that use visual inertial odometry to compute their relative positions and obtain results that are comparable with simulation. This work lays the foundation for designing and coordinating configurable smart particles, with applications in smart materials and nanomedicine. read less NOT USED (low confidence) B. Erbas, S. Yardim, and M. Kırca, “Mechanical properties of fullerene embedded silicon nanowires,” Archive of Applied Mechanics. 2022. link Times cited: 1 NOT USED (low confidence) L. Qiu, F. Li, N. Zhu, Y. Feng, X. Zhang, and X. Zhang, “Broad low-frequency phonon resonance for increased across-tube heat transport,” Physical Review B. 2022. link Times cited: 5 NOT USED (low confidence) F. Faraji, M. Neek‐Amal, E. Neyts, and F. Peeters, “Indentation of graphene nano-bubbles.,” Nanoscale. 2022. link Times cited: 0 Abstract: Molecular dynamics simulations are used to investigate the e… read moreAbstract: Molecular dynamics simulations are used to investigate the effect of an AFM tip when indenting graphene nano bubbles filled by a noble gas (i.e. He, Ne and Ar) up to the breaking point. The failure points resemble those of viral shells as described by the Föppl-von Kármán (FvK) dimensionless number defined in the context of elasticity theory of thin shells. At room temperature, He gas inside the bubbles is found to be in the liquid state while Ne and Ar atoms are in the solid state although the pressure inside the nano bubble is below the melting pressure of the bulk. The trapped gases are under higher hydrostatic pressure at low temperatures than at room temperature. read less NOT USED (low confidence) D. Lee et al., “Ultrahigh strength, modulus, and conductivity of graphitic fibers by macromolecular coalescence,” Science Advances. 2022. link Times cited: 26 Abstract: Theoretical considerations suggest that the strength of carb… read moreAbstract: Theoretical considerations suggest that the strength of carbon nanotube (CNT) fibers be exceptional; however, their mechanical performance values are much lower than the theoretical values. To achieve macroscopic fibers with ultrahigh performance, we developed a method to form multidimensional nanostructures by coalescence of individual nanotubes. The highly aligned wet-spun fibers of single- or double-walled nanotube bundles were graphitized to induce nanotube collapse and multi-inner walled structures. These advanced nanostructures formed a network of interconnected, close-packed graphitic domains. Their near-perfect alignment and high longitudinal crystallinity that increased the shear strength between CNTs while retaining notable flexibility. The resulting fibers have an exceptional combination of high tensile strength (6.57 GPa), modulus (629 GPa), thermal conductivity (482 W/m·K), and electrical conductivity (2.2 MS/m), thereby overcoming the limits associated with conventional synthetic fibers. read less NOT USED (low confidence) Y. Wang et al., “Stress-assisted design of stiffened graphene electrode structure toward compact energy storage,” Journal of Energy Chemistry. 2022. link Times cited: 6 NOT USED (low confidence) V. Ho, D. T. Ho, C. T. Nguyen, and S. Y. Kim, “Negative out-of-plane Poisson’s ratio of bilayer graphane,” Nanotechnology. 2022. link Times cited: 1 Abstract: With its excellent mechanical and thermal properties, bilaye… read moreAbstract: With its excellent mechanical and thermal properties, bilayer graphane is a promising material for realizing future nanoelectromechanical systems. In this study, we focus on the auxetic behavior of bilayer graphane under external loading along various directions through atomistic simulations. We numerically and theoretically reveal the mechanism of the auxeticity in terms of intrinsic interactions between carbon atoms by constructing bilayer graphane. Given that the origin of the auxeticity is intrinsic rather than extrinsic, the work provides a novel technique to control the dimensions of nanoscale bilayer graphane by simply changing the external conditions without the requirement of complex structural design of the material. read less NOT USED (low confidence) L. C. Felix and D. Galvão, “Guided fractures in graphene mechanical diode-like structures.,” Physical chemistry chemical physics : PCCP. 2022. link Times cited: 0 Abstract: The concept of a diode is usually applied to electronic and … read moreAbstract: The concept of a diode is usually applied to electronic and thermal devices but very rarely for mechanical ones. A recently proposed fracture rectification effect in polymer-based structures with triangular void defects has motivated us to test these ideas at the nanoscale using graphene membranes. Using fully-atomistic reactive molecular dynamics simulations we showed that robust rectification-like effects exist. The fracture can be 'guided' to more easily propagate along one specific direction than its opposite. We also observed that there is an optimal value for the spacing between each void for the rectification effect. read less NOT USED (low confidence) W.-J. Chen et al., “Asymmetrical carbon nanotubes exhibit opposing thermal rectification behaviors under different heat baths,” International Journal of Heat and Mass Transfer. 2022. link Times cited: 5 NOT USED (low confidence) H. Li and P. S. Branicio, “Ultralow friction of graphene-coated silica nanoparticle film,” Computational Materials Science. 2022. link Times cited: 4 NOT USED (low confidence) X. Lei, S. Shimizu, and J.-X. Shi, “The Theoretical Study of Kink Deformation in Graphite Based on Differential Geometric Method,” Nanomaterials. 2022. link Times cited: 3 Abstract: Kink deformation is often observed in materials with laminat… read moreAbstract: Kink deformation is often observed in materials with laminated layers. Graphite composed of stacked graphene layers has the unique laminated structure of carbon nanomaterials. In this study, we performed the interlayer deformation of graphite under compression using a simulation of molecular dynamics and proposed a differential geometrical method to evaluate the kink deformation. We employed “mean curvature” for the representativeness of the geometrical properties to explore the mechanism of kink deformation and the mechanical behaviors of graphite in nanoscale. The effect of the number of graphene layers and the lattice chirality of each graphene layer on kink deformation and stress–strain diagrams of compressed graphite are discussed in detail. The results showed that kink deformation occurred in compressed graphite when the strain was approximately equal to 0.02, and the potential energy of the compressed graphite proportionately increased with the increasing compressive strain. The proposed differential geometric method can not only be applied to kink deformation in nanoscale graphite, but could also be extended to solving and predicting interlayer deformation that occurs in micro- and macro-scale material structures with laminated layers. read less NOT USED (low confidence) S. Lahkar, B.-G. Jeong, X. Wang, K. Hemker, and K. Reddy, “Intrinsic strengthening and toughening in hexagonal boron nitride by ripples,” Acta Materialia. 2022. link Times cited: 4 NOT USED (low confidence) M. Surana, T. Ahmed, and N. Admal, “Interface mechanics of 2D materials on metal substrates,” Journal of the Mechanics and Physics of Solids. 2022. link Times cited: 1 NOT USED (low confidence) B. Yang, Y. Yang, L. Li, and P. Yang, “Study on thermal properties of triangular graphene with different boundary types,” Micro and Nanostructures. 2022. link Times cited: 1 NOT USED (low confidence) H. Wei, H. Z. J. Ting, Y. Gong, C. Lü, O. Glukhova, and H. Zhan, “Torsional Properties of Bundles with Randomly Packed Carbon Nanotubes,” Nanomaterials. 2022. link Times cited: 1 Abstract: Carbon nanotube (CNT) bundles/fibers possess promising appli… read moreAbstract: Carbon nanotube (CNT) bundles/fibers possess promising applications in broad fields, such as artificial muscles and flexible electronics, due to their excellent mechanical properties. The as-prepared CNT bundles contain complex structural features (e.g., different alignments and components), which makes it challenging to predict their mechanical performance. Through in silico studies, this work assessed the torsional performance of CNT bundles with randomly packed CNTs. It is found that CNT bundles with varying constituent CNTs in terms of chirality and diameter exhibit remarkably different torsional properties. Specifically, CNT bundles consisting of CNTs with a relatively large diameter ratio possess lower gravimetric energy density and elastic limit than their counterpart with a small diameter ratio. More importantly, CNT bundles with the same constituent CNTs but different packing morphologies can yield strong variation in their torsional properties, e.g., up to 30%, 16% and 19% difference in terms of gravimetric energy density, elastic limit and elastic constants, respectively. In addition, the separate fracture of the inner and outer walls of double-walled CNTs is found to suppress the gravimetric energy density and elastic limit of their corresponding bundles. These findings partially explain why the experimentally measured mechanical properties of CNT bundles vary from each other, which could benefit the design and fabrication of high-performance CNT bundles. read less NOT USED (low confidence) F. Sha’bani and S. Rash-Ahmadi, “Length scale effect on the buckling behavior of a graphene sheets using modified couple stress theory and molecular dynamics method,” Acta Mechanica. 2022. link Times cited: 2 NOT USED (low confidence) A. Giri, A. M. Evans, M. A. Rahman, A. McGaughey, and P. Hopkins, “Highly Negative Poisson’s Ratio in Thermally Conductive Covalent Organic Frameworks.,” ACS nano. 2022. link Times cited: 10 Abstract: The prospect of combining two-dimensional materials in verti… read moreAbstract: The prospect of combining two-dimensional materials in vertical stacks has created a new paradigm for materials scientists and engineers. Herein, we show that stacks of two-dimensional covalent organic frameworks are endowed with a host of unique physical properties that combine low densities, high thermal conductivities, and highly negative Poisson's ratios. Our systematic atomistic simulations demonstrate that the tunable mechanical and thermal properties arise from their singular layered architecture comprising strongly bonded light atoms and periodic laminar pores. For example, the negative Poisson's ratio arises from the weak van der Waals interactions between the two-dimensional layers along with the strong covalent bonds that act as hinges along the layers, which facilitate the twisting and swiveling motion of the phenyl rings relative to the tensile plane. The mechanical and thermal properties of two-dimensional covalent organic frameworks can be tailored through structural modularities such as control over the pore size and/or interlayer separation. We reveal that these materials mark a regime of materials design that combines low densities with high thermal conductivities arising from their nanoporous yet covalently interconnected structure. read less NOT USED (low confidence) M. Yang, Q. Sheng, L. Guo, H. Zhang, and G. Tang, “How Gas-Solid Interaction Matters in Graphene-Doped Silica Aerogels.,” Langmuir : the ACS journal of surfaces and colloids. 2022. link Times cited: 5 Abstract: It was interesting to experimentally find that the thermal i… read moreAbstract: It was interesting to experimentally find that the thermal insulation of silica aerogels was improved by doping graphene sheets with high heat conductivity. The underlying mechanism is investigated in the present work from the perspective of gas-solid interaction using a comprehensive analysis of molecular dynamics (MD) simulations, theoretical modeling, and experimental data. The MD-modeled small pores are demonstrated to effectively represent big pores in silica aerogels because of similar heat conduction physics, because it is found that adsorption does not contribute to gas heat conduction. Meanwhile, based on the experimentally measured density, the porous structures are schematically re-engineered using molecular modeling for the first time. The evaluated pore size distributions numerically present a consistency with available experimental data. Inspired by the visualization of the 3D pore structure, we proposed a graphene/silica/nitrogen model to evaluate the role of graphene in heat conduction: it can not only reduce effective gas collision (impede heat transport) but also enhance the gas-solid coupling effect. The former is dominant because of the high porosity, leading to an improvement in thermal insulation. The competition between them can be the reason for the "trade-off" phenomenon in the graphene doping effect in the available experiment. read less NOT USED (low confidence) S. Zhao, Y. Zhang, Y. Zhang, W. Zhang, J. Yang, and S. Kitipornchai, “Genetic programming-assisted micromechanical models of graphene origami-enabled metal metamaterials,” Acta Materialia. 2022. link Times cited: 28 NOT USED (low confidence) P. Gao et al., “Optimization of Reactive Force Field Simulation: Refactor, Parallelization, and Vectorization for Interactions,” IEEE Transactions on Parallel and Distributed Systems. 2022. link Times cited: 4 Abstract: Molecular dynamics (MD) simulations are playing an increasin… read moreAbstract: Molecular dynamics (MD) simulations are playing an increasingly important role in many areas ranging from chemical materials to biological molecules. With the continuing development of MD models, the potentials are getting larger and more complex. In this article, we focus on the reactive force field (ReaxFF) potential from LAMMPS to optimize the computation of interactions. We present our efforts on refactoring for neighbor list building, bond order computation, as well as valence angles and torsion angles computation. After redesigning these kernels, we develop a vectorized implementation for non-bonded interactions, which is nearly $100 \times$100× faster than the management processing element (MPE) on the Sunway TaihuLight supercomputer. Furthermore, we have implemented the three-body-list free torsion angles computation, and propose a line-locked software cache method to eliminate write conflicts in the torsion angle and valence angle interactions resulting in an order-of-magnitude speedup on a single Sunway TaihuLight node. In addition, we achieve a speedup of up to 3.5 compared to the KOKKOS package on an Intel Xeon Gold 6148 core. When executed on 1,024 processes, our implementation enables the simulation of 21,233,664 atoms on 66,560 cores with a performance of 0.032 ns/day and a weak scaling efficiency of 95.71 percent. read less NOT USED (low confidence) L. V. Sang, N. Sugimura, K. Khajeh, and H. Washizu, “Solid Lubricants of Combined Graphene and Iron Nanoparticles for Study of Friction and Stability.,” Langmuir : the ACS journal of surfaces and colloids. 2022. link Times cited: 1 Abstract: This study focuses on designing solid lubricant particles by… read moreAbstract: This study focuses on designing solid lubricant particles by combining graphene and iron nanoparticles (namely, graphene-iron (GI) particles) and carrying out studies for behaviors of their lubrication for the iron contact by molecular dynamics simulations. By the annealing process of melting and cooling iron, we can create the lubricant particle, where the iron nanoparticle tightly holds the graphene sheet. In the sliding friction investigations, it is found that the influences of orientation of the graphene sheets inside the contact, size and configuration of the GI particles, and lubrication with the bare iron nanoparticles on friction are strong at low pressure and very slight at high pressure. The GI particles provide stability of the friction coefficient over a wide range of pressure; however, it strongly increases with pressure in the lubrication behaviors by the bare iron particles due to the deformation of the particles. The iron contact in the presence of the GI particles can achieve the ultralow values of the friction coefficient from 0.009 to 0.042. The contact surfaces are not nearly damaged (slightly elastic deformation) with the pressure up to 2.0 GPa. From the comparisons between the results in this study and previous reports, the GI particles have better lubrication than graphene coated on a surface and well stabilize under pressure compared to the different lubricant nanoparticles. The main reason for this is due to the contributions of graphene, besides reduction of the contact area resulted from the configuration of the nanoparticle, which promotes sliding and sharing of the pressure, preventing collision between the lubricant particles. read less NOT USED (low confidence) R. Li et al., “Operando Formation of Van der Waals Heterostructures for Achieving Macroscale Superlubricity on Engineering Rough and Worn Surfaces,” Advanced Functional Materials. 2022. link Times cited: 26 Abstract: Macroscale superlubricity breakdown of lubricating materials… read moreAbstract: Macroscale superlubricity breakdown of lubricating materials caused by substrate surface roughening and mechanochemical modification poses great challenges for their practical tribological applications. Here, a facile way is reported to access robust macroscale superlubricity in a vacuum environment, via the operando formation of graphene/transition‐metal dichalcogenide (TMDC) heterostructures at wear‐induced rough surfaces. By trapping active amorphous carbon (a‐C) wear products between TMDC flakes, the sandwich structures readily transform into graphene/TMDC heterostructures during running‐in stage, based on shear‐induced confinement and load‐driven graphitization effects. Then they assemble into multipoint flake‐like tribofilms to achieve macroscale superlubricity at steady stage by reducing contact area, eliminating strong cross‐interface carbon–carbon interactions and polishing a‐C rough nascent surface. Atomistic simulations reveal the preferential formation of graphene/TMDC heterostructures during running‐in stage and demonstrate the superlubric sliding of TMDCs on the graphene. The findings are of importance to achieve robust superlubricity and provide a good strategy for the synthesis of other van der Waals heterostructures. read less NOT USED (low confidence) A. Aghajamali and A. Karton, “Superior performance of the machine-learning GAP force field for fullerene structures,” Structural Chemistry. 2022. link Times cited: 3 NOT USED (low confidence) S. Ababtin et al., “Single-wall carbon nanotube mechanical behavior using the modified embedded atom method with bond order (MEAM-BO),” Modelling and Simulation in Materials Science and Engineering. 2022. link Times cited: 1 Abstract: We report the capability of the modified embedded atom metho… read moreAbstract: We report the capability of the modified embedded atom method with bond order (MEAM-BO) potential to capture single-wall carbon nanotube (SWCNT) mechanical properties accurately by calculating the wavenumber of the radial breathing mode (RBM), elastic properties, and folding energy (ΔE), which are all associated with bond curvature. We find that the existing MEAM-BO potential gives results that correlate well with experimental and density functional theory (DFT) results with the exception of the folding energy. The MEAM-BO potential parameters are updated to produce a MEAM-BO* potential for the SWCNT system. Interestingly, including the SWCNT data base, improved the previous fit of the C-H binary system. Previous studies in the literature concluded that the CNTs diameter, d, was inversely proportional to the RBM wavenumber and folding energy. When comparing MEAM-BO*, MEAM-BO, REBO, and ReaxFF with DFT results, we found that MEAM-BO* gave the closest results to DFT for the RBM wavenumbers, folding energy, and SWCNT Young’s modulus, especially for small diameter SWCNTs. We conclude that MEAM-BO* captures SWCNT curvature effects and unsaturated hydrocarbons bond behavior. read less NOT USED (low confidence) K. de Almeida Barcelos and L. Alisaraie, “Microtubule-Inspired Functionalization of Carbon Nanotubes: A Biomimetic Carrier Design,” bioRxiv. 2022. link Times cited: 2 Abstract: We propose a bioinspired, non-covalent carbon nanotubes (CNT… read moreAbstract: We propose a bioinspired, non-covalent carbon nanotubes (CNTs) functionalization strategy to augment their bioavailability and alleviate their biotoxicity. For functionalization, select amphiphilic peptides from a cytoskeletal biopolymer, microtubule (MT), were used. The peptides are involved in the MT polymerization by maintaining the essential lateral interactions among the MT’s α- and β-tubulin subunits. They also participate in forming the MT-binding sites for hosting several MT-targeting antimitotics. Utilizing in silico methods, this study showed the peptides influenced CNT’s diffusivity and aqueous solubility. The hydrodynamic shield formed by the peptides from β-tubulin was more widespread on the CNT than the α-tubulin peptides’; however, the latter created a broader hydrophobic CNT coating than those from the β-tubulin. In particular, the peptides consisting of the H1-B2, H10, H1-B2, and the M-loop, demonstrated structural features that serve to augment CNTs’ water solubility and dispersibility. The performance of the peptide-functionalized CNTs as drug carriers was examined by studying seventeen antimitotics. The CNT-peptides structural composition was identified as a suitable carrier for phomopsin A, laulimalide, epothilone A, epothilone D, discodermolide, eribulin, and docetaxel. The peptides played dual roles displaying affinities to the antimitotics and the CNT; in particular, the peptides from the H1-B2 and H2-B3 loops of β-tubulin exhibited exceptional binding properties. Specific mutations on the wildtype peptides, including those from the α-tubulin M-loop and H2-B3, or the β-tubulin H1-B2, are proposed to refine their hydrophobicity, eliminate unfavorable inter-peptides electrostatic interactions or the spatial hindrance at certain regions, to enhance their conformational steadiness and exposure to the tube surface. A combination of the select amphiphilic peptides from both tubulin subunits is suggested to improve CNTs bioavailability and efficiency for carrying insoluble hydrophobic cargos. read less NOT USED (low confidence) M. Kański, S. Hrabar, A. V. van Duin, and Z. Postawa, “Development of a Charge-Implicit ReaxFF for C/H/O Systems,” The Journal of Physical Chemistry Letters. 2022. link Times cited: 5 Abstract: Modeling chemical reactions in condensed phases is difficult… read moreAbstract: Modeling chemical reactions in condensed phases is difficult. Interaction potentials (or force fields) like ReaxFF can perform this modeling with a high overall accuracy, but the disadvantage of ReaxFF is a low simulation speed arising from costly algorithms, in particular charge equilibration. Therefore, we reparametrized ReaxFF to incorporate Coulomb forces into other terms of the force field. Because of this change, our charge-implicit ReaxFF-CHO is >2 times faster than the original parametrization. Despite the lack of explicit electrostatic interactions, our potential can correctly model the reactions and densities of systems containing carbon, hydrogen, and oxygen atoms. We have used the new potential to simulate bombardment of trehalose by water clusters. It has been observed experimentally that these water projectiles can increase the sensitivity of secondary ion mass spectrometry by more than an order of magnitude, but no explanation for this phenomenon was given. Our simulations show that the increase in the intensity of the recorded signal coincides with the emission of trehalose–water complexes. read less NOT USED (low confidence) G. Jung, H. J. Myung, and S. Irle, “Artificial Neural Network Potentials for Mechanics and Fracture Dynamics of Materials.” 2022. link Times cited: 1 Abstract:
Atomistic understanding of mechanics and failure of materi… read moreAbstract:
Atomistic understanding of mechanics and failure of materials is the key for engineering and applications. Modeling accurately brittle failure with crack propagation in covalent crystals requires a quantum mechanics-based description of individual bond-breaking events for large system sizes. Machine Learned (ML) potentials have emerged to overcome the traditional, physics-based modeling tradeoff between accuracy and accessible time and length scales. Previous studies have shown successful applications of ML potentials for describing the structure and dynamics of molecular systems and amorphous or liquid phases of materials. However, their application to deformation and failure processes in materials is yet uncommon. In this study, we discuss apparent limitations of ML potentials to describe deformation and fracture under loadings and propose a way to generate and select training data for their employment in simulations of deformation and fracture of crystals. We applied the proposed approach to 2D crystal graphene, utilizing the density-functional tight-binding (DFTB) method for more efficient and extensive data generation in place of density functional theory (DFT). Then, we explore how the data selection affects the accuracy of the developed artificial neural network potential (NNP), indicating that only the errors in total energies and atomic forces are insufficient to judge the NNP’s reliability. Therefore, we evaluate and select NNPs based on their performance in describing physical properties, e.g., stress-strain curves and geometric deformation. In sharp contrast to popular reactive bond order potentials, our optimized NNP predicts straight crack propagation in graphene along both armchair and zigzag lattice directions, as well as higher fracture toughness of zigzag edge direction. Our study provides significant insight into crack propagation mechanisms at atomic scales and highlights strategies for NNP developments of broader materials. read less NOT USED (low confidence) Y. Ni, S. Qian, and Q. Tong, “Strain-Engineered Adhesion and Reversible Transfer Printing of Water Droplets and Nanoparticles.,” ACS applied materials & interfaces. 2022. link Times cited: 1 Abstract: Transfer printing has been playing a crucial role in the fab… read moreAbstract: Transfer printing has been playing a crucial role in the fabrication of various functional devices. In spite of the extensive progress in technology, challenges are remaining, in the aspects of accuracy, efficiency, and adaptivity. Here, we propose a reversible transfer printing technique of tailoring adhesion by selectively stretching the surfaces. Through molecular dynamics simulations, we demonstrate the transfer of nanoscale substances such as water droplets, colloids, and nanoparticles between two graphene surfaces with strains switched on and off. We reveal the mechanism of the dynamic behaviors by analyzing the energies and driving forces of the substances during the process of transfer. The work not only advances the fundamental understanding of adhesion but also can inspire applications in the design of next-generation electronic and biomedical devices. read less NOT USED (low confidence) M. Konnik, F. Panerai, and K. Stephani, “Influence of impurities and degradation on carbon fiber and amorphous carbon thermal conductivity,” AIAA SCITECH 2022 Forum. 2022. link Times cited: 0 NOT USED (low confidence) F. Monji, D. Desai, and C. Jian, “Toward the design of robust multilayer graphene: mechanistic understanding of the role played by interlayer interactions,” Journal of Materials Science. 2022. link Times cited: 1 NOT USED (low confidence) P. Jia, K. Huang, T. Sumigawa, T. Shimada, L. Guo, and T. Kitamura, “A unified atomic energy release rate criterion for nonlinear brittle fracture in graphene nanoribbons,” International Journal of Solids and Structures. 2022. link Times cited: 4 NOT USED (low confidence) Y. I. Jhon, I. K. Han, J. H. Lee, and Y. Min, “Microscopic understanding of exceptional orientation-dependent tensile and fracture responses of two-dimensional transition-metal carbides,” Applied Surface Science. 2022. link Times cited: 3 NOT USED (low confidence) M. Konnik, F. Panerai, and K. Stephani, “The role of impurities and degradation on the thermal conductivity of carbon fiber and amorphous carbon,” Carbon Trends. 2022. link Times cited: 1 NOT USED (low confidence) T. Panczyk, W. Płaziński, A. Brzyska, and P. Wolski, “Adsorption of Hyaluronan Saccharides on the Surface of a Single Walled Carbon Nanotube. A Computational Study,” Applied Surface Science. 2022. link Times cited: 1 NOT USED (low confidence) G. Jung, S. Irle, and B. Sumpter, “Dynamic Aspects of Graphene Deformation and Fracture from Approximate Density Functional Theory,” ChemRN: Materials Chemistry (Topic). 2022. link Times cited: 7 Abstract: Graphene is one of the most intriguing two-dimensional carbo… read moreAbstract: Graphene is one of the most intriguing two-dimensional carbon materials. Its mechanical strength and failure are key concerns for materials engineering and applications. Despite the success of fracture mechanics, the mechanism of how pristine materials fail remains an elusive problem. While many theoretical studies based on molecular dynamics using empirical forcefields have tried to address this question, atomic-scale mechanics are not clearly understood. Especially, a widely employed bond-breaking approach based on the critical bond length has not been rigorously tested. Here, utilizing molecular dynamics simulations with density functional based tight binding, we investigate how the failure of the material initiates. The Wiberg bond order (WBO) to estimate the change of chemical bonds shows a transition from sp2 (WBO ~ 1.33) to sp3 (WBO < 1.0) during the deformation under loadings. However, it reveals that a single threshold value for either the WBO or bond length is insufficient to decide material failure. Instead, collective behaviors of the local atomic group govern the fracture initiation of pristine graphene. Our study provides dynamic mechanical responses based on quantum mechanics, which have not been captured by empirical forcefields, opening opportunities to design properties by precisely coupling the mechanics and quantum mechanics. read less NOT USED (low confidence) J. Baimova, P. Polyakova, and S. Shcherbinin, “Effect of the Structure Morphology on the Mechanical Properties of Crumpled Graphene Fiber,” Fibers. 2021. link Times cited: 3 Abstract: Crumpled graphene fiber is a promising structure to be a gra… read moreAbstract: Crumpled graphene fiber is a promising structure to be a graphene precursor to enhance the production and mechanical properties of various carbon fibers. The primary goal of the present work is to study the crumpled graphene of different morphologies using molecular dynamics simulations to find the effect of the structural peculiarities on the mechanical properties, such as the tensile strength, elastic modulus, and deformation characteristics. Mono- and poly-disperse structures are considered under uniaxial tension along two different axes. As it is found, both structures are isotropic and stress–strain curves for tension along different directions are very similar. Young’s modulus of crumpled graphene is close, about 50 and 80 GPa; however, the strength of the polydisperse structure is bigger at the elastic regime. While a monodisperse structure can in-elastically deform until high tensile strength of 90 GPa, structure analysis showed that polydisperse crumpled graphene fiber pores appeared two times faster than the monodisperse ones. read less NOT USED (low confidence) Y. Cao, C. Zhang, Y. Liu, B.-S. Li, Z. Yu, and Y.-W. Zhang, “Irradiation-Induced Defects and Their Effects on the Electronic Structures in T-Carbon,” The Journal of Physical Chemistry C. 2021. link Times cited: 1 NOT USED (low confidence) G. Günay and U. Kemerli, “A NOVEL DESIGN OF PERISTALTIC CARBON NANO PUMP AND AN ANALYSIS OF HELIUM FLOW,” Materiali in tehnologije. 2021. link Times cited: 1 Abstract: A novel nano-scale pump that can transport atoms or small mo… read moreAbstract: A novel nano-scale pump that can transport atoms or small molecules with a peristaltic motion is designed. It is proven by molecular-dynamics simulations that the introduced nano-pump design works properly. The designed nano-pump consists of one main carbon nanotube named the flow tube and two rotors where multi-walled carbon nanotubes are attached. The pumping of helium atoms by the designed peristaltic carbon nano-pump is investigated by molecular-dynamics simulations. For varying rotor speeds and blade counts, time-averaged velocity, temperature, and pressure results of pumped helium atoms are calculated, and relationships between them are modeled as polynomial surfaces. The results showed that rotor frequency increases the velocity of helium linearly and the temperature and pressure of helium non-linearly. Furthermore, the blade count of the proposed mechanism does not substantially affect the velocity as per the previous studies in the literature. read less NOT USED (low confidence) O. Yenigun and M. Barisik, “Active Heat Transfer Enhancement by Interface-Localized Liquid Dielectrophoresis Using Interdigitated Electrodes,” MatSciRN: Computational Studies of Nanoscale Materials (Topic). 2021. link Times cited: 3 Abstract: We introduced an active heat transfer control between graphe… read moreAbstract: We introduced an active heat transfer control between graphene and water using interdigitated electrodes (IDEs). Oppositely charged co-planer electrodes embedded on a graphene surface created a non-uniform electric field. Resulted interface localized liquid dielectrophoresis (LDEP) perpendicular to surface enhanced the water/graphene coupling and decreased the interfacial thermal resistance (ITR) substantially. We correlated the theoretical calculations of average electric field strength near surface with the Kapitza values measured at the corresponding electrode configurations. We obtained a unified linear variation of Kapitza as a function of average electric strength independent of electrode size and charge. By increasing the electric field strength, we measured up to 96% decrease of Kapitza near electrodes. Since the IDEs generated electric field was only interface localized, it required lower electrode charges than any parallel plate capacitor systems. We showed that ITR remains dominant in heat transfer behavior for systems as big as 100nm such that interface localized electric field can at least double the heat removal by eliminating the ITR of graphene/water interface. By converting the hydrophobic few-layer graphene to super-hydrophilic condition with ultra-low Kapitza, current results are important for graphene-based materials considered for the solution of the thermal management problem of current and next generation micro/nano-electronics. read less NOT USED (low confidence) S. Zhao, Y. Zhang, Y. Zhang, J. Yang, and S. Kitipornchai, “Graphene Origami-Enabled Auxetic Metallic Metamaterials: An Atomistic Insight,” International Journal of Mechanical Sciences. 2021. link Times cited: 32 NOT USED (low confidence) Z. Hu, P. Zhang, W. Guo, Z. Zhang, and B. Yakobson, “Stress-dominated growth of two-dimensional materials on nonplanar substrates,” Journal of the Mechanics and Physics of Solids. 2021. link Times cited: 4 NOT USED (low confidence) Y. Yu, X. Zhang, S. Yin, L. Bai, and Z. Liu, “The sp2-sp3 transition and shear slipping dominating the compressive deformation of diamond-like carbon,” Journal of Non-Crystalline Solids. 2021. link Times cited: 8 NOT USED (low confidence) A. J. Lew and M. Buehler, “A deep learning augmented genetic algorithm approach to polycrystalline 2D material fracture discovery and design,” Applied Physics Reviews. 2021. link Times cited: 18 NOT USED (low confidence) M. Kianezhad, M. Youzi, M. Vaezi, and H. N. Pishkenari, “Rectilinear Motion of Carbon Nanotube on Gold Surface,” International Journal of Mechanical Sciences. 2021. link Times cited: 10 NOT USED (low confidence) D. Wu, H. Ding, Z.-Q. Fan, P.-Z. Jia, H.-Q. Xie, and X.-K. Chen, “High Interfacial Thermal Conductance across Heterogeneous GaN/graphene interface,” Applied Surface Science. 2021. link Times cited: 15 NOT USED (low confidence) G. Raos and B. Zappone, “Polymer Adhesion: Seeking New Solutions for an Old Problem,” Macromolecules. 2021. link Times cited: 38 Abstract: : Polymer adhesion is ubiquitous in both the natural world a… read moreAbstract: : Polymer adhesion is ubiquitous in both the natural world and human technology. It is also a complex multiscale phenomenon, such that the solution of adhesion problems requires a convergence of chemistry, physics, and engineering. In this Perspective, we provide an overview of some of the fundamental concepts that have emerged in the fi eld of polymer adhesion, discuss recent work, and identify challenges in three speci fi c areas: (a) theories and simulations, with an emphasis on problems involving chain scission; (b) experimental methods for measuring forces and characterizing interfaces at the molecular scale; and (c) strategies inspired by living organisms to generate underwater adhesion. read less NOT USED (low confidence) G. B. Kanegae and A. F. Fonseca, “Effective acetylene length dependence of the elastic properties of different kinds of graphynes,” Carbon Trends. 2021. link Times cited: 5 NOT USED (low confidence) P. Gao et al., “lMFF: Efficient and Scalable layered Materials Force Field on Heterogeneous Many-Core Processors,” SC21: International Conference for High Performance Computing, Networking, Storage and Analysis. 2021. link Times cited: 7 Abstract: LAMMPS is one of the most popular Molecular Dynamic (MD) pac… read moreAbstract: LAMMPS is one of the most popular Molecular Dynamic (MD) packages and is widely used in the field of physics, chemistry and materials simulation. Layered Materials Force Field (LMFF) is our expansion of the LAMMPS potential function based on the Tersoff potential and inter-layer potential (ILP) in LAMMPS. LMFF is designed to study layered materials such as graphene and boron hexanitride. It is universal and does not depend on any platform. We have also carried out a series of optimizations on LMFF and the optimization work is carried out on the new generation of Sunway supercomputer, called SWLMFF. Experiments show that our implementation is efficient, scalable and portable. When generic LMFF is ported to Intel Xeon Gold 6278C, $2\times$ performance improvement is achieved. For the optimized SWLMFF, the overall performance improvement is nearly $200-330\times$ compared to the original ILP and Tersoff potentials. And SWLMFF has good parallel efficiency of 95%-100% under weak scaling with 2.7 million atoms on a single process. The maximum atomic system simulated by SWLMFF is close to $2^{31}$ atoms. And nanosecond simulations in one day can be realized. read less NOT USED (low confidence) N. Gastellu, M. Kilgour, and L. Simine, “Electronic Conduction through Monolayer Amorphous Carbon Nanojunctions.,” The journal of physical chemistry letters. 2021. link Times cited: 2 Abstract: In molecular electronic conduction, exotic lattice morpholog… read moreAbstract: In molecular electronic conduction, exotic lattice morphologies often give rise to exotic behaviors. Among 2D systems, graphene is a notable example. Recently, a stable amorphous version of graphene called monolayer amorphous carbon (MAC) was synthesized. MAC poses a new set of questions regarding the effects of disorder on conduction. In this Letter, we perform an ensemble-level computational analysis of the coherent electronic transmission through MAC nanofragments in search of defining characteristics. Our analysis, relying on a semiempirical Hamiltonian (Pariser-Parr-Pople) and Landauer theory, showed that states near the Fermi energy (EF) in MAC inherit partial characteristics of analogous surface states in graphene nanofragments. Away from EF, current is carried by a set of delocalized states that transition into a subset of insulating interior states at the extreme portions of MAC's energy spectrum. Finally, we also found that quantum interference between frontier orbitals is a common feature among MAC nanofragments. read less NOT USED (low confidence) M. Shariati, B. Azizi, M. Hosseini, and M. Shishesaz, “On the calibration of size parameters related to non-classical continuum theories using molecular dynamics simulations,” International Journal of Engineering Science. 2021. link Times cited: 22 NOT USED (low confidence) C. Han, Z.-qian Chen, and B. Li, “Thermal rectification in three dimensional graphite nanocones,” International Journal of Heat and Mass Transfer. 2021. link Times cited: 3 NOT USED (low confidence) Y. Lin, K. Xu, X.-Z. Cao, Z. Zhang, and J. Wu, “Role of nanotube chirality on the mechanical characteristics of pillared graphene,” Mechanics of Materials. 2021. link Times cited: 12 NOT USED (low confidence) R. Li et al., “Toward high load-bearing, ambient robust and macroscale structural superlubricity through contact stress dispersion,” Chemical Engineering Journal. 2021. link Times cited: 13 NOT USED (low confidence) I. E. Golentus, “Long-range in-plane elastic displacement fields of double vacancies in graphene,” Physica E: Low-dimensional Systems and Nanostructures. 2021. link Times cited: 0 NOT USED (low confidence) Y. Chen, H. Qin, H. Liu, L. Shui, Y. Liu, and X. Chen, “Extended Deformable Tension-Shear Model for Graphene Layered Materials with Non-uniform Staggering,” Journal of the Mechanics and Physics of Solids. 2021. link Times cited: 4 NOT USED (low confidence) L. Qiu, F. Li, N. Zhu, Y. Feng, X. Zhang, and X. Zhang, “Elaborate manipulation on CNT intertube heat transport by using a polymer knob,” International Journal of Heat and Mass Transfer. 2021. link Times cited: 7 NOT USED (low confidence) C. Li, W. Tang, X. Tang, L. Yang, and L. Bai, “A Molecular Dynamics Study on the Synergistic Lubrication Mechanisms of Graphene/Water-based Lubricant Systems,” Tribology International. 2021. link Times cited: 26 NOT USED (low confidence) J. Li, Y. Peng, X. Tang, B. Liu, L. Bai, and K. Zhou, “Hydrogen-passivation modulation on the friction behavior of graphene with vacancy defects under strain engineering,” Applied Surface Science. 2021. link Times cited: 8 NOT USED (low confidence) N. V. Maksyuta, V. Vysotskii, S. Efimenko, Y. V. Martysh, D. N. Maksyuta, and A. Sabirov, “Study of Focusing Effects during the Channeling of Hydrogen Atoms in Non-Chiral Single-Layer Carbon Nanotubes,” Journal of Surface Investigation: X-ray, Synchrotron and Neutron Techniques. 2021. link Times cited: 0 NOT USED (low confidence) L. Shi et al., “Achieving high strength and ductility in copper matrix composites with graphene network,” Materials Science and Engineering: A. 2021. link Times cited: 18 NOT USED (low confidence) G. Ananthakrishnan et al., “Graphene-mediated stabilization of surface facets on metal substrates,” Journal of Applied Physics. 2021. link Times cited: 5 NOT USED (low confidence) D. de Camargo Branco and G. Cheng, “Employing Hybrid Lennard-Jones and Axilrod-Teller Potentials to Parametrize Force Fields for the Simulation of Materials’ Properties,” Materials. 2021. link Times cited: 3 Abstract: The development of novel materials has challenges besides th… read moreAbstract: The development of novel materials has challenges besides their synthesis. Materials such as novel MXenes are difficult to probe experimentally due to their reduced size and low stability under ambient conditions. Quantum mechanics and molecular dynamics simulations have been valuable options for material properties determination. However, computational materials scientists may still have difficulty finding specific force field models for their simulations. Force fields are usually hard to parametrize, and their parameters’ determination is computationally expensive. We show the Lennard-Jones (2-body interactions) combined with the Axilrod-Teller (3-body interactions) parametrization process’ applicability for metals and new classes of materials (MXenes). Because this parametrization process is simple and computationally inexpensive, it allows users to predict materials’ behaviors under close-to-ambient conditions in molecular dynamics, independent of pre-existing potential files. Using the process described in this work, we have made the Ti2C parameters set available for the first time in a peer-reviewed work. read less NOT USED (low confidence) Z. Ji et al., “Strain-Induced Nonlinear Frictional Behavior of Graphene Nanowall Films.,” ACS applied materials & interfaces. 2021. link Times cited: 2 Abstract: Graphene nanowall (GNW) films, a representation of three-dim… read moreAbstract: Graphene nanowall (GNW) films, a representation of three-dimensional (3D) carbon nanomaterial films, are emerging as promising candidates for applications in electric devices and composites, on account of their 3D structures and exceptional properties of graphene sheets. However, the frictional responses of GNW films, which exhibit significant influence on their performances, have seldom been reported. Herein, we reported a growth process of a GNW film by the chemical vapor deposition method and studied the frictional behavior of the GNW film for the first time. The results demonstrated the nonlinearity between the frictional force of the GNW film and normal load. Based on the structural evolution of the GNW film with normal load and frictional tests on precompressed GNW films, the influence of the strain property of the GNW film, namely, the strengthening effect, could be confirmed. The results of molecular dynamics simulations show that the bending force of GNWs in front of the tip plays a determinate role in the frictional force of the GNW film. Furthermore, the bending force is proportional to the bending contact area, which increases nonlinearly with the normal load due to the strengthening effect of the GNW film. The result suggests that the nonlinear increase of the bending contact area induced by the strengthening effect of the GNW film is the key factor that leads to its nonlinear frictional force. This study provides a novel insight into the frictional responses of GNW films, which would be beneficial for the design and application of electric devices and composites made of GNW and other 3D carbon nanomaterial films. read less NOT USED (low confidence) C. G. Bresnahan, G. Jenness, R. Kumar, and M. Shukla, “Introductory Roadmap to Current Reactive Force-Field Methodologies,” Practical Aspects of Computational Chemistry V. 2021. link Times cited: 0 NOT USED (low confidence) A. Agrawal and R. Mirzaeifar, “Computational investigation of deformation mechanisms at the atomistic scale of metallic glass-graphene composites (MGGCs),” Journal of Applied Physics. 2021. link Times cited: 1 NOT USED (low confidence) X. Zhou et al., “Influence of Onion-like Carbonaceous Particles on the Aggregation Process of Hydrocarbons,” ACS Omega. 2021. link Times cited: 2 Abstract: Molecular dynamics simulations are performed to characterize… read moreAbstract: Molecular dynamics simulations are performed to characterize the nucleation behavior of organic compounds in the gas phase. Six basic molecular species are considered—ethylene, propylene, toluene, styrene, ethylbenzene, and para-xylene—in interaction with onion-like carbon nanostructures that model soot nanoparticles (NPs) at room temperature. We identify a shell-to-island aggregation process during the physisorption of aromatic molecules on the soot surface: The molecules tend to first cover the NP in a shell, on top of which additional adsorbates form island-shaped aggregates. We present results for the binding energy, suggesting that the NPs lead to the formation of more stable molecular aggregates in comparison with the pure gas phase. Our findings describe a plausible microscopic mechanism for the active role of soot in the formation and growth of organic particulate matter. read less NOT USED (low confidence) X. Peng, P. Jiang, Y. Ouyang, S. Lu, W. Ren, and J. Chen, “Reducing Kapitza resistance between graphene/water interface via interfacial superlattice structure,” Nanotechnology. 2021. link Times cited: 17 Abstract: The control of thermal transport across solid/liquid interfa… read moreAbstract: The control of thermal transport across solid/liquid interface has attracted great interests for efficient thermal management in the integrated devices. Based on molecular dynamics simulations, we study the effect of interfacial superlattice structure on the Kapitza resistance between graphene/water interface. Compared to the original interface, introducing interfacial superlattice structure can result in an obvious reduction of Kapitza resistance by as large as 40%, exhibiting a decreasing trend of Kapitza resistance with the decrease of superlattice period. Surprisingly, by analyzing the structure of water block and atomic vibration characteristics on both sides of the interface, we find the interfacial superlattice structure has a minor effect on the water structure and overlap in the vibrational spectrum, suggesting that the improved interfacial heat transfer is not mainly originated from the liquid block. Instead, the spectral energy density analysis reveals that phonon scattering rate in the interfacial graphene layer is significantly enhanced after superlattice decoration, giving rise to the increased thermal resistance between the interfacial graphene layer and its nearest neighboring layer. As this thermal resistance is coupled to the Kapitza resistance due to the local nature of interfacial superlattice decoration, the enhanced thermal resistance in the solid segment indirectly reduces the Kapitza resistance between graphene/water interface, which is supported by the enhancement of the spectral interfacial thermal conductance upon superlattce decoration at microscopic level. Our study uncovers the physical mechanism for controlling heat transfer across solid/liquid interface via interfacial superlattice structure, which might provide valuable insights for designing efficient thermal interfaces. read less NOT USED (low confidence) D. Damasceno and C. R. Miranda, “The role of topological defects on the mechanical properties of single-walled carbon nanotubes,” Philosophical Magazine. 2021. link Times cited: 4 Abstract: ABSTRACT Carbon nanotubes (CNTs) are among the most employed… read moreAbstract: ABSTRACT Carbon nanotubes (CNTs) are among the most employed nanomaterials in developing new technologies. Their applicability requires a fundamental understanding of the chirality and defect effects on the mechanical properties. In this study, molecular dynamics (MD) simulations were performed to investigate the mechanical response of defective single-walled carbon nanotubes (SWCNTs) under tension loading. The Stones-Wales, monovacancy, and the divacancy reconstructions (585, 555777, and 555567777) defects were considered. In addition, we investigated the influence of the adaptive intermolecular reactive bond order (AIREBO) potential cut-off radii on the defect formation energy of SWCNTs. Our results reveal that the tensile strength properties are notably dependent on the chirality and defect configurations at strains over 8%. Energetically favourable defects have a high impact on the mechanical response of SWCNTs. A combination of certain defects may lead the control on the fracture pattern of the SWCNTs, which can significantly contribute to the designing of innovative nanostructures with tailored properties. read less NOT USED (low confidence) M. Lbadaoui-Darvas, G. Garberoglio, K. Karadima, M. Cordeiro, A. Nenes, and S. Takahama, “Molecular simulations of interfacial systems: challenges, applications and future perspectives,” Molecular Simulation. 2021. link Times cited: 12 Abstract: ABSTRACT We present a comprehensive review of methods and ap… read moreAbstract: ABSTRACT We present a comprehensive review of methods and applications of molecular simulations of interfacial systems. We give a detailed overview of the main techniques and major challenges in the following aspects of solid and fluid surfaces: adsorption at solid surfaces, interfacial transport and surface-to-bulk partitioning. We summarise methods to estimate macroscopic properties interfaces (adsorption isotherms, surface tension and contact angle) and ways to extract quantitative information about fluctuating liquid surfaces. We demonstrate the usage of these methods on recent applications from the fields of atmospheric science, material science and biophysics. The two main goals of this review are: (i) to provide guidance in practical questions, such as choosing software, force field, level of theory, system geometry, and finding the appropriate selective surface analysis methods based on the type of the interface and the nature of the physical problem to be studied; and (ii) to highlight domains where molecular simulations can bring about substantial advances in our understanding in important questions of applied science as a function of future method development and adaptation for applied fields. read less NOT USED (low confidence) D. Hua, Q. Zhou, W. Wang, S. Li, X. Liu, and H. Wang, “Atomic mechanism on the mechanical and tribological performance of amorphous/graphene nanolaminates,” Tribology International. 2021. link Times cited: 8 NOT USED (low confidence) G. Wang, G. Zhao, J. Song, and Q. Ding, “Study on the tribological properties of copper coated by graphene and h-BN from the atomic scale,” Applied Surface Science. 2021. link Times cited: 16 NOT USED (low confidence) H. Loulijat, “Numerical study of the formation of liquid layer at the liquid–solid interface near the graphene in nanofluid,” Materials Today: Proceedings. 2021. link Times cited: 0 NOT USED (low confidence) H. Xu et al., “Computationally Guided Design of Large-Diameter Carbon Nanotube Bundles for High-Strength Materials,” ACS Applied Nano Materials. 2021. link Times cited: 10 NOT USED (low confidence) J. Wang et al., “Thermoelectric Performance Enhanced by Destructive Quantum Interference in Nanoporous Carbon Nanotube Based Junctions,” physica status solidi (RRL) – Rapid Research Letters. 2021. link Times cited: 3 Abstract: Aided by density functional theory with nonequilibrium Green… read moreAbstract: Aided by density functional theory with nonequilibrium Green's functions simulations, the thermoelectric (TE) properties of nanoporous carbon nanotube junctions formed by covalently binding carbon nanotubes via benzene bridges with either meta‐ or para‐connections are investigated. The results show that the TE performances of meta‐connected nanoporous carbon nanotube junctions are significantly improved due to the influence of destructive quantum interference (DQI) effect. Moreover, the TE properties of meta‐connected carbon nanotube junctions can be further improved by substitution of nitrogen atom and gate voltage. The reason is that the quantum interference patterns can be transformed from DQI to constructive quantum interference (or Fano resonance). The theoretical analysis shows that the TE figure of merit (ZT) for meta‐connected carbon nanotube junctions at room temperature is close to 0.5 near the Fermi level, ≈20 times higher than that of the perfect carbon nanotube junction. These results reveal that quantum interference effect can indeed be used to enhance the TE performance of molecular junctions. read less NOT USED (low confidence) R. S. Ambekar et al., “Flexure resistant 3D printed zeolite-inspired structures,” Additive Manufacturing. 2021. link Times cited: 9 NOT USED (low confidence) A. Aghajamali and A. Karton, “Can force fields developed for carbon nanomaterials describe the isomerization energies of fullerenes,” Chemical Physics Letters. 2021. link Times cited: 8 NOT USED (low confidence) M. Haždijojić, M. Ćosić, and R. Rymzhanov, “Morphological Analysis of the Rainbow Patterns Created by Point Defects of Graphene,” The Journal of Physical Chemistry C. 2021. link Times cited: 4 NOT USED (low confidence) K. Cai, S. Sun, J. Shi, C. Zhang, and Y. Zhang, “Position effects of the graphene-origami actuators on the rotation of a CNT nanomotor.,” Physical chemistry chemical physics : PCCP. 2021. link Times cited: 3 Abstract: This study designs a carbon nanotube (CNT)-based rotary nano… read moreAbstract: This study designs a carbon nanotube (CNT)-based rotary nanomotor actuated by four graphene origami (G-ori) drivers with adjustable positions. When the drivers' tips have different contact states with the CNT rotor at a finite temperature, the rotor has different rotational states due to different interaction strength between the rotor and the tips. Using the molecular dynamics simulation approach, we study the effects of the drivers' position, such as the gaps between the rotor and the drivers' tips and their layout angles. Numerical results indicate that both the stable rotational frequency (SRF) and the rotational direction change with the layout angles. In an interval from -40° to -25°, the SRF increases monotonously. There also exists an angle interval in which the G-ori drivers fail to actuate the rotor's rotation. The gap offset leads to different SRF of the same rotor. Hence, one can design a rotary nanomotor with controllable rotation, which is critical for its applications in a nanomachine. read less NOT USED (low confidence) R. Villarreal et al., “Breakdown of Universal Scaling for Nanometer-Sized Bubbles in Graphene,” Nano Letters. 2021. link Times cited: 18 Abstract: We report the formation of nanobubbles on graphene with a ra… read moreAbstract: We report the formation of nanobubbles on graphene with a radius of the order of 1 nm, using ultralow energy implantation of noble gas ions (He, Ne, Ar) into graphene grown on a Pt(111) surface. We show that the universal scaling of the aspect ratio, which has previously been established for larger bubbles, breaks down when the bubble radius approaches 1 nm, resulting in much larger aspect ratios. Moreover, we observe that the bubble stability and aspect ratio depend on the substrate onto which the graphene is grown (bubbles are stable for Pt but not for Cu) and trapped element. We interpret these dependencies in terms of the atomic compressibility of the noble gas as well as of the adhesion energies between graphene, the substrate, and trapped atoms. read less NOT USED (low confidence) T. Kabengele and E. Johnson, “Theoretical modeling of structural superlubricity in rotated bilayer graphene, hexagonal boron nitride, molybdenum disulfide, and blue phosphorene.,” Nanoscale. 2021. link Times cited: 7 Abstract: The superior lubrication capabilities of two-dimensional cry… read moreAbstract: The superior lubrication capabilities of two-dimensional crystalline materials such as graphene, hexagonal boron nitride (h-BN), and molybdenum disulfide (MoS2) have been well known for many years. It is generally accepted that structural superlubricity in these materials is due to misalignment of the surfaces in contact, known as incommensurability. In this work, we present a detailed study of structural superlubricity in bilayer graphene, h-BN, MoS2, and the novel material blue phosphorene (b-P) using dispersion-corrected density-functional theory with periodic boundary conditions. Potential energy surfaces for interlayer sliding were computed for the standard (1 × 1) cell and three rotated, Moiré unit cells for each material. The energy barriers to form the rotated structures remain higher than the minimum-energy sliding barriers for the (1 × 1) cells. However, if the rotational barriers can be overcome, nearly barrierless interlayer sliding is observed in the rotated cells for all four materials. This is the first density-functional investigation of friction using rotated, Moiré cells, and the first prediction of structural superlubricty for b-P. read less NOT USED (low confidence) Y. Yang, M. Liu, S. Zhou, W. Ren, Q. Zhou, and W. Zhang, “Strengthening behaviour of continuous graphene network in metal matrix composites,” Carbon. 2021. link Times cited: 18 NOT USED (low confidence) Y. Zhao et al., “The strategy of repairing defective graphene by graphene patch via interlayer cross-linking,” Computational Materials Science. 2021. link Times cited: 1 NOT USED (low confidence) A. Shahrokh and M. M. S. Fakhrabadi, “Effects of copper nanoparticles on elastic and thermal properties of conductive polymer nanocomposites,” Mechanics of Materials. 2021. link Times cited: 10 NOT USED (low confidence) M. Ćosić, M. Hadžijojić, S. Petrović, and R. Rymzhanov, “Morphological study of the rainbow scattering of protons by graphene.,” Chaos. 2021. link Times cited: 3 Abstract: We have studied metamorphoses of the angular rainbow pattern… read moreAbstract: We have studied metamorphoses of the angular rainbow pattern generated by classical rainbow scattering of protons by graphene. To analyze the rainbow pattern, a morphological method was developed. It focuses on the shape of the rainbow pattern rather than on the exact position of rainbow lines or the particle count. It comprises elements of the catastrophe theory, which provides a local model of the rainbow pattern and the reduced potential and an index theory of algebraic topology that allows the evolution of the rainbow pattern to be linked with bifurcations of critical points of the reduced potential. The obtained insight is summarized into five principles that allow an experimentalist to sketch a qualitatively correct rainbow pattern in the impact parameter plane and the distribution of the reduced potential critical points, just by observing the evolution of the angular rainbows. The morphological method should be applicable for the analysis of all structurally stable patterns in nature. read less NOT USED (low confidence) Y. Chen, H. Qin, Y. Liu, Q. Pei, and Y.-W. Zhang, “Modeling and Analysis of the Geometry‐Dependent Mechanical and Thermal Properties of Coiled Carbon Nanotubes,” physica status solidi (RRL) – Rapid Research Letters. 2021. link Times cited: 4 Abstract: Coiled carbon nanotubes (CNTs) have attracted much attention… read moreAbstract: Coiled carbon nanotubes (CNTs) have attracted much attention thanks to their unique geometrical structure along with outstanding mechanical and thermal properties. However, the relationship between the geometrical parameters and mechanical and thermal properties of coiled CNTs remains largely unexplored. Herein, coiled CNTs are constructed with various geometries by phase‐field crystal (PFC) modeling and their mechanical and thermal properties are investigated by molecular dynamics (MD) simulations. It is found that the effect of geometrical parameters of coiled CNTs on the Young's modulus can be well captured by analytical formulas derived from the mechanical spring tube model. These extensive MD simulations show that the Young's modulus of coiled CNTs increases with an increase in coil pitch l and CNT radius r, but decreases with an increase in coil radius R. Furthermore, using the nonequilibrium MD (NEMD) method, it is found that the thermal conductivity of coiled CNTs decreases with an increase in coil radius R, but increases slightly with an increase of coil pitch l and CNT radius r. Valuable insights into the mechanical and thermal properties of coiled CNTs are provided and the findings here may serve as useful guidelines for the design of coiled CNTs for device applications. read less NOT USED (low confidence) A. Thompson et al., “LAMMPS - A flexible simulation tool for particle-based materials modeling at the atomic, meso, and continuum scales,” Computer Physics Communications. 2021. link Times cited: 2377 NOT USED (low confidence) S. Ajori, S. Haghighi, and R. Ansari, “Molecular dynamics study on the effect of polymer physisorption on the thermal conductivity of cross-linked functionalized carbon nanotubes,” Proceedings of the Institution of Mechanical Engineers, Part C: Journal of Mechanical Engineering Science. 2021. link Times cited: 1 Abstract: In this paper, an investigation into the thermal conductivit… read moreAbstract: In this paper, an investigation into the thermal conductivity of cross-linked functionalized carbon nanotubes under physical adsorption of polyethylene (PE) chains (cfCNTs/PE) is performed using molecular dynamics (MD) simulations. To have a comprehensive study, the covalently attached functional groups with two types of distribution patterns, namely mapped and wrapped configurations, are used. The cfCNT/PE shows a smaller thermal conductivity than that of pure one. Also, the results demonstrate that the thermal conductivity of cfCNTs reduces by the physisorption of PE chains. By rising the weight percentage of physisorbed PE, the thermal conductivity of cfCNT/PE reduces more. Based on the results, for the constant weight percentage of non-covalent PE chains, the thermal conductivity increases as the number of cross-linked PE chains augments. read less NOT USED (low confidence) L. Yang, Y. Huang, K. Liu, Z. Wu, and Q. Zhou, “Dislocation-Induced Energy Dissipation in a Tunable Trilayer Graphene Resonator,” The Journal of Physical Chemistry C. 2021. link Times cited: 1 Abstract: In crystalline materials, the creation and modulation of dis… read moreAbstract: In crystalline materials, the creation and modulation of dislocations are often associated with plastic deformation and energy dissipation. Here we report a study on the energy dissipation of a trilayer graphene ribbon resonator. The vibration of the ribbon generates cyclic mechanical loading to the graphene ribbon, during which mechanical energy is dissipated as heat. Measuring the quality factor of the graphene resonator provides a way to evaluate the energy dissipation. The graphene ribbon is integrated with silicon micro actuators, allowing its in‐plane tension to be finely tuned. As we gradually increased the tension, we observed, in addition to the well‐known resonance frequency increase, a large change in the energy dissipation. We propose that the dominating energy dissipation mechanism shifts over three regions. With small applied tension, the graphene is in elastic region, and the major energy dissipation is through graphene edge folding; as the tension increases, dislocations start to develop in the sample to gradually dominate the energy dissipation; finally, at large enough tension, graphene layers become decoupled and start to slide and cause friction, which induces the more severe energy dissipation. The generation and modulation of dislocations are modeled by molecular dynamics calculation and a method to count the energy loss is proposed and compared to the experiment. read less NOT USED (low confidence) B. Katz, L. Krainov, and V. Crespi, “Shape Entropy of a Reconfigurable Ising Surface.,” Physical review letters. 2021. link Times cited: 0 Abstract: Disclinations in a 2D sheet create regions of Gaussian curva… read moreAbstract: Disclinations in a 2D sheet create regions of Gaussian curvature whose inversion produces a reconfigurable surface with many distinct metastable shapes, as shown by molecular dynamics of a disclinated graphene monolayer. This material has a near-Gaussian "density of shapes" and an effectively antiferromagnetic interaction between adjacent cones. A∼10 nm patch has hundreds of distinct metastable shapes with tunable stability and topography on the size scale of biomolecules. As every conical disclination provides an Ising-like degree of freedom, we call this technique "Isigami." read less NOT USED (low confidence) X. Ruan, J. Shi, X. Wang, W. Wang, X. Fan, and F. Zhou, “Robust Superlubricity and Moiré Lattice’s Size Dependence on Friction between Graphdiyne Layers.,” ACS applied materials & interfaces. 2021. link Times cited: 8 Abstract: Structural superlubricity is a fascinating physical phenomen… read moreAbstract: Structural superlubricity is a fascinating physical phenomenon that plays a significant role in many scientific and technological fields. Here, we report the robust superlubricating state achieved on the interface of relatively rotated graphdiyne (GDY) bilayers; such an interface with ultralow friction is formed at nearly arbitrary rotation angles and sustained at temperatures up to 300 K. We also identified the reverse correlation between the friction coefficient and size of the Moiré lattice formed on the surface of the incommensurate stacked GDY bilayers, particularly in a small size range. Our investigations show that the ultralow friction and the reduction of the friction coefficient with the increase in size of the Moiré lattice are closely related to the interfacial energetics and charge density as well as the atomic arrangement. Our findings enable the development of a new solid lubricant with novel superlubricating properties, which facilitate precise modulation of the friction at the interface between two incommensurate contacting crystalline surfaces. read less NOT USED (low confidence) J. Dong, L. Zhang, B. Wu, F. Ding, and Y. Liu, “Theoretical Study of Chemical Vapor Deposition Synthesis of Graphene and Beyond: Challenges and Perspectives.,” The journal of physical chemistry letters. 2021. link Times cited: 15 Abstract: Two-dimensional (2D) materials have attracted great attentio… read moreAbstract: Two-dimensional (2D) materials have attracted great attention in recent years because of their unique dimensionality and related properties. Chemical vapor deposition (CVD), a crucial technique for thin-film epitaxial growth, has become the most promising method of synthesizing 2D materials. Different from traditional thin-film growth, where strong chemical bonds are involved in both thin films and substrates, the interaction in 2D materials and substrates involves the van der Waals force and is highly anisotropic, and therefore, traditional thin-film growth theories cannot be applied to 2D material CVD synthesis. During the last 15 years, extensive theoretical studies were devoted to the CVD synthesis of 2D materials. This Perspective attempts to present a theoretical framework for 2D material CVD synthesis as well as the challenges and opportunities in exploring CVD mechanisms. We hope that this Perspective can provide an in-depth understanding of 2D material CVD synthesis and can further stimulate 2D material synthesis. read less NOT USED (low confidence) S. Abramov, V. Roganov, V. Osipov, and G. Matveev, “Implementation of the LAMMPS package using T-system with an Open Architecture,” Informatics and Automation. 2021. link Times cited: 0 Abstract: Supercomputer applications are usually implemented in the C,… read moreAbstract: Supercomputer applications are usually implemented in the C, C++, and Fortran programming languages using different versions of the Message Passing Interface library. The "T-system" project (OpenTS) studies the issues of automatic dynamic parallelization of programs. In practical terms, the implementation of applications in a mixed (hybrid) style is relevant, when one part of the application is written in the paradigm of automatic dynamic parallelization of programs and does not use any primitives of the MPI library, and the other part of it is written using the Message Passing Interface library. In this case, the library is used, which is a part of the T-system and is called DMPI (Dynamic Message Passing Interface). In this way, it is necessary to evaluate the effectiveness of the MPI implementation available in the T-system. The purpose of this work is to examine the effectiveness of DMPI implementation in the T-system. In a classic MPI application, 0% of the code is implemented using automatic dynamic parallelization of programs and 100% of the code is implemented in the form of a regular Message Passing Interface program. For comparative analysis, at the beginning the code is executed on the standard Message Passing Interface, for which it was originally written, and then it is executed using the DMPI library taken from the developed T-system. Сomparing the effectiveness of the approaches, the performance losses and the prospects for using a hybrid programming style are evaluated. As a result of the conducted experimental studies for different types of computational problems, it was possible to make sure that the efficiency losses are negligible. This allowed to formulate the direction of further work on the T-system and the most promising options for building hybrid applications. Thus, this article presents the results of the comparative tests of LAMMPS application using OpenMPI and using OpenTS DMPI. The test results confirm the effectiveness of the DMPI implementation in the OpenTS parallel programming environment read less NOT USED (low confidence) Y. Zeng, Q. Zhang, Y. Wang, J. Jiang, H. Xing, and X. Li, “Toughening and Crack Healing Mechanisms in Nanotwinned Diamond Composites with Various Polytypes.,” Physical review letters. 2021. link Times cited: 6 Abstract: As an emerging ceramic material, recently synthesized nanotw… read moreAbstract: As an emerging ceramic material, recently synthesized nanotwinned diamond composites with various polytypes embedded in nanoscale twins exhibit unprecedented fracture toughness without sacrificing hardness. However, the toughening and crack healing mechanisms at the atomic scale and the associated crack propagation process of nanotwinned diamond composites remain mysterious. Here, we perform large-scale atomistic simulations of crack propagation in nanotwinned diamond composites to explore the underlying toughening and crack healing mechanisms in nanotwinned diamond composites. Our simulation results show that nanotwinned diamond composites have a higher fracture energy than single-crystalline and nanotwinned diamonds, which originates from multiple toughening mechanisms, including twin boundary and phase boundary impeding crack propagation, crack deflection and zigzag paths in nanotwins and sinuous paths in polytypes, and the formation of disordered atom clusters. More remarkably, our simulations reproduce more detailed crack propagation processes at the atomic scale, which is inaccessible by experiments. Moreover, our simulations reveal that crack healing occurs due to the rebonding of atoms on fracture surfaces during unloading and that the extent of crack healing is associated with whether the crack surfaces are clean. Our current study provides mechanistic insights into a fundamental understanding of toughening and crack healing mechanisms in nanotwinned diamond composites. read less NOT USED (low confidence) Y. Yang, M. Liu, S. Zhou, W. Ren, Q. Zhou, and S. Lan, “Breaking through the strength-ductility trade-off in graphene reinforced Ti6Al4V composites,” Journal of Alloys and Compounds. 2021. link Times cited: 22 NOT USED (low confidence) S. Luo, A. Ademiloye, Z.-tian Wu, and Y. Zhang, “Molecular hierarchical release using hydrogenated graphene origami under electric field,” Materials Science in Semiconductor Processing. 2021. link Times cited: 1 NOT USED (low confidence) R. Ishraaq, M. Rashid, and S. Nahid, “A novel theoretical model for predicting the optimum number of layers of multiwall carbon nanotube for reinforcing iron and molecular dynamics investigation of the failure mechanism of multi-grained matrix,” Computational Materials Science. 2021. link Times cited: 3 NOT USED (low confidence) C.-C. Chiang, J. Breslin, S. Weeks, and Z. Meng, “Dynamic Mechanical Behaviors of Nacre-Inspired Graphene-Polymer Nanocomposites Depending on Internal Nanostructures.,” Extreme Mechanics Letters. 2021. link Times cited: 2 NOT USED (low confidence) S. Korobeynikov, V. V. Alyokhin, and A. Babichev, “Advanced nonlinear buckling analysis of a compressed single layer graphene sheet using the molecular mechanics method,” International Journal of Mechanical Sciences. 2021. link Times cited: 4 NOT USED (low confidence) B. Mortazavi, M. Silani, E. Podryabinkin, T. Rabczuk, X. Zhuang, and A. Shapeev, “First‐Principles Multiscale Modeling of Mechanical Properties in Graphene/Borophene Heterostructures Empowered by Machine‐Learning Interatomic Potentials,” Advanced Materials. 2021. link Times cited: 121 Abstract: Density functional theory calculations are robust tools to e… read moreAbstract: Density functional theory calculations are robust tools to explore the mechanical properties of pristine structures at their ground state but become exceedingly expensive for large systems at finite temperatures. Classical molecular dynamics (CMD) simulations offer the possibility to study larger systems at elevated temperatures, but they require accurate interatomic potentials. Herein the authors propose the concept of first‐principles multiscale modeling of mechanical properties, where ab initio level of accuracy is hierarchically bridged to explore the mechanical/failure response of macroscopic systems. It is demonstrated that machine‐learning interatomic potentials (MLIPs) fitted to ab initio datasets play a pivotal role in achieving this goal. To practically illustrate this novel possibility, the mechanical/failure response of graphene/borophene coplanar heterostructures is examined. It is shown that MLIPs conveniently outperform popular CMD models for graphene and borophene and they can evaluate the mechanical properties of pristine and heterostructure phases at room temperature. Based on the information provided by the MLIP‐based CMD, continuum models of heterostructures using the finite element method can be constructed. The study highlights that MLIPs were the missing block for conducting first‐principles multiscale modeling, and their employment empowers a straightforward route to bridge ab initio level accuracy and flexibility to explore the mechanical/failure response of nanostructures at continuum scale. read less NOT USED (low confidence) Y. Nie, H. Zhan, L. Kou, and Y. T. Gu, “Atomistic Insights on the Rheological Property of Polycaprolactone Composites with the Addition of Graphene,” Advanced Materials Technologies. 2021. link Times cited: 3 Abstract: To facilitate the biomedical applications of biocomposites, … read moreAbstract: To facilitate the biomedical applications of biocomposites, researchers have used different types of fillers to enhance their mechanical properties. However, the addition of fillers not only changes the mechanical performance of the biocomposites, but also affects their printability, that is, their rheological properties. With the aid of atomistic simulations, this work investigates the influence of graphene size and aggregation on the rheological properties of polycaprolactone (PCL) composites. For the same weight ratio, increasing the graphene size causes the viscosity of the PCL composite to increase until a threshold edge length equal to PCL's average radius of gyration. After this threshold value, the viscosity decreases with increasing edge length. The PCL composite with multilayered graphene exhibits a lower viscosity compared with its counterpart with monolayer graphene. Specifically, the addition of graphene is shown to augment the shear‐thinning effect. The findings in this work provide a fundamental understanding of the rheological property of PCL composites with the addition of 2D nanofillers, which shed light on the ink design for bioprinting. read less NOT USED (low confidence) A. Kazemi, Z. E. Nataj, Y. Abdi, and M. A. Abdol, “Tuning wettability and surface order of MWCNTs by functionalization for water desalination,” Desalination. 2021. link Times cited: 6 NOT USED (low confidence) S. K. Achar, L. Zhang, and J. Johnson, “Efficiently Trained Deep Learning Potential for Graphane,” The Journal of Physical Chemistry C. 2021. link Times cited: 12 NOT USED (low confidence) A. Giri and P. Hopkins, “Heat Transfer Mechanisms and Tunable Thermal Conductivity Anisotropy in Two-Dimensional Covalent Organic Frameworks with Adsorbed Gases.,” Nano letters. 2021. link Times cited: 20 Abstract: Two-dimensional covalent organic frameworks (2D COFs) are a … read moreAbstract: Two-dimensional covalent organic frameworks (2D COFs) are a novel class of materials that are ideal for gas storage and separation technologies due to their high porosities and large surface areas. In this work we study the heat transfer mechanisms in 2D COFs with the addition of gas adsorbates, demonstrating the remarkably tunable anisotropic response of the phonon thermal conductivity in 2D COFs during gas adsorption. More specifically, our results from atomistic simulations on COF-5/methane systems show that, as the gas density increases, the cross-plane thermal conductivity along the direction of the laminar pores increases, whereas the in-plane thermal conductivity along the 2D sheets is monotonically decreased. We show that a large portion of heat is conducted along the laminar pore channels by the gas molecules colliding with the solid framework and is directly related to the gas diffusivities. read less NOT USED (low confidence) F. Thiemann, P. Rowe, A. Zen, E. A. Müller, and A. Michaelides, “Defect-Dependent Corrugation in Graphene.,” Nano letters. 2021. link Times cited: 20 Abstract: Graphene's intrinsically corrugated and wrinkled topolo… read moreAbstract: Graphene's intrinsically corrugated and wrinkled topology fundamentally influences its electronic, mechanical, and chemical properties. Experimental techniques allow the manipulation of pristine graphene and the controlled production of defects which allows one to control the atomic out-of-plane fluctuations and thus tune graphene's properties. Here, we perform large scale machine learning-driven molecular dynamics simulations to understand the impact of defects on the structure of graphene. We find that defects cause significantly higher corrugation leading to a strongly wrinkled surface. The magnitude of this structural transformation strongly depends on the defect concentration and specific type of defect. Analyzing the atomic neighborhood of the defects reveals that the extent of these morphological changes depends on the preferred geometrical orientation and the interactions between defects. While our work highlights that defects can strongly affect graphene's morphology, it also emphasizes the differences between distinct types by linking the global structure to the local environment of the defects. read less NOT USED (low confidence) G. Manolis, P. Dineva, T. Rangelov, and D. Sfyris, “Mechanical models and numerical simulations in nanomechanics: A review across the scales,” Engineering Analysis with Boundary Elements. 2021. link Times cited: 17 NOT USED (low confidence) S. Isbill, A. Shields, D. J. Mattei-Lopez, R. Kapsimalis, and J. Niedziela, “Reviewing computational studies of defect formation and behaviors in carbon fiber structural units,” Computational Materials Science. 2021. link Times cited: 3 NOT USED (low confidence) H. Zhan, J. Shang, C. Lü, and Y. T. Gu, “Tensile properties of functionalized carbon nanothreads,” Nano Materials Science. 2021. link Times cited: 4 NOT USED (low confidence) B. Javvaji, R. Zhang, X. Zhuang, and H. S. Park, “Flexoelectric electricity generation by crumpling graphene,” Journal of Applied Physics. 2021. link Times cited: 6 Abstract: We utilize atomistic simulations that account for point char… read moreAbstract: We utilize atomistic simulations that account for point charges and dipoles to demonstrate that flexoelectricity, which arises from strain gradients, can be exploited to generate electricity from crumpled graphene sheets. Indentation of a circular graphene sheet generates localized developable (d)-cones, for which we verify the core radius and azimuthal angle with established theoretical models. We determine the voltage that can be generated based on the resulting electrostatic fields and compare the voltage generation to previous theoretical predictions that are scaled down to the nanoscale. In doing so, we find that the voltage generated from crumpling graphene exceeds, by about an order of magnitude, the expected voltage generation, indicating the benefit of exploiting the large strain gradients that are possible at the nanoscale. Finally, we demonstrate that crumpling may be a superior mechanism of flexoelectric energy generation as compared to bending of two-dimensional nanomaterials. read less NOT USED (low confidence) C. Shen, H. Qiu, and W. Guo, “Ultrahigh hydrogen and nitrogen selectivity achieved by the nanoporous graphene with a precise nanopore,” Carbon. 2021. link Times cited: 2 NOT USED (low confidence) A. Trentino et al., “Atomic-Level Structural Engineering of Graphene on a Mesoscopic Scale,” Nano Letters. 2021. link Times cited: 22 Abstract: Structural engineering is the first step toward changing pro… read moreAbstract: Structural engineering is the first step toward changing properties of materials. While this can be at relative ease done for bulk materials, for example, using ion irradiation, similar engineering of 2D materials and other low-dimensional structures remains a challenge. The difficulties range from the preparation of clean and uniform samples to the sensitivity of these structures to the overwhelming task of sample-wide characterization of the subjected modifications at the atomic scale. Here, we overcome these issues using a near ultrahigh vacuum system comprised of an aberration-corrected scanning transmission electron microscope and setups for sample cleaning and manipulation, which are combined with automated atomic-resolution imaging of large sample areas and a convolutional neural network approach for image analysis. This allows us to create and fully characterize atomically clean free-standing graphene with a controlled defect distribution, thus providing the important first step toward atomically tailored two-dimensional materials. read less NOT USED (low confidence) M. Biedermann, D. Diddens, and A. Heuer, “Connecting the quantum and classical mechanics simulation world: Applications of reactive step molecular dynamics simulations.,” The Journal of chemical physics. 2021. link Times cited: 3 Abstract: This article presents the application of the reactive step m… read moreAbstract: This article presents the application of the reactive step molecular dynamics simulation method [M. Biedermann, D. Diddens, and A. Heuer, J. Chem. Theory Comput. 17, 1074 (2021)] toward two different atomistic, chemically reactive systems. During reactive steps, transitions from reactant to product molecules are modeled according to physically correct transition probabilities based on quantum chemical information about the reactions such as molecular reaction rates via instant exchange of the employed force field and a subsequent, short relaxation of the structure. In the first application, we study the follow-up reactions of singly reduced ethylene carbonate (EC) radicals in EC solution, first, via extensive ab initio molecular dynamics simulations and, second, with the reactive step algorithm. A direct comparison of both simulation methods shows excellent agreement. Then, we employ the reactive step algorithm to simulate the enolate formation of 2-methylcyclopropanone with the base lithium diisopropylamine. Thereby, we can demonstrate that the reactive step algorithm is also capable of capturing effects from kinetic vs thermodynamic control of chemical reactions during simulation. read less NOT USED (low confidence) J. Hossain and B. H. Kim, “Scale Effect on Simple Liquid Transport through a Nanoporous Graphene Membrane.,” Langmuir : the ACS journal of surfaces and colloids. 2021. link Times cited: 15 Abstract: The transport mechanism of a simple liquid through nanoporou… read moreAbstract: The transport mechanism of a simple liquid through nanoporous graphene membranes (NPGMs) with pores of various diameters has been explored by utilizing nonequilibrium molecular dynamics (NEMD) simulation. The flow is initiated using a pressure-driven flow mechanism that moves the specular reflection wall at a constant velocity. Both the local density peak near the membrane and the pressure drop are dependent on the pore diameter. For accurate calculation of the velocity profile inside the nanopore, we implemented three boundary approaches and local nanoscale variants to see the effect of these factors on the nature of the nanoscale flow. We found an optimized definition of the pore boundary, which minimizes the deviation between MD results and slip-viscosity-modified Sampson's prediction for nanopores of various diameters. Additionally, we observed that with decreasing pore size, the pore center velocity increases, as does the slip velocity, which we attributed to van der Waals interaction between the liquid and wall atoms inside the nanopore. However, the effects of slip velocity, interfacial viscosity, and pore boundary decay exponentially with increasing pore diameter because of the dominance of van der Waals repulsive forces at the molecular level. read less NOT USED (low confidence) L. C. Felix et al., “Mechanical properties of 3D-printed pentadiamond,” Journal of Physics D: Applied Physics. 2021. link Times cited: 3 Abstract: In this work, we combined fully atomistic molecular dynamics… read moreAbstract: In this work, we combined fully atomistic molecular dynamics and finite elements simulations with mechanical testings to investigate the mechanical behavior of atomic and 3D-printed models of pentadiamond. Pentadiamond is a recently proposed new carbon allotrope, which is composed of a covalent network of pentagonal rings. Our results showed that the stress–strain (SS) behavior is almost scale-independent. The SS curves of the 3D-printed structures exhibit three characteristic regions. For low-strain values, this first region presents a non-linear behavior close to zero, followed by a well-defined linear behavior. The second regime is a quasi-plastic one and the third one is densification followed by structural failures (fracture). Young’s modulus values decrease from 520 to 486 MPa. The deformation mechanism is bending-dominated and different from the layer-by-layer deformation mechanism observed for other 3D-printed structures. They exhibit good energy absorption capabilities (3.5 MJ kg−1), with some structures even outperforming epoxy Kevlar and TRIP-steel. The structures show better absorption potential than the well-known porous architectures such as honeycomb, schwarzites, and tubulanes and occupy the same region of woven structures in the Ashby chart. read less NOT USED (low confidence) P. Z. Hanakata, A. Plummer, and D. Nelson, “Anomalous Thermal Expansion in Ising-like Puckered Sheets.,” Physical review letters. 2021. link Times cited: 3 Abstract: Motivated by efforts to create thin nanoscale metamaterials … read moreAbstract: Motivated by efforts to create thin nanoscale metamaterials and understand atomically thin binary monolayers, we study the finite temperature statistical mechanics of arrays of bistable buckled dilations embedded in free-standing two-dimensional crystalline membranes that are allowed to fluctuate in three dimensions. The buckled nodes behave like discrete, but highly compressible, Ising spins, leading to a phase transition at T_{c} with singularities in the staggered "magnetization," susceptibility, and specific heat, studied via molecular dynamics simulations. Unlike conventional Ising models, we observe a striking divergence and sign change of the coefficient of thermal expansion near T_{c} caused by the coupling of flexural phonons to the buckled spin texture. We argue that a phenomenological model coupling Ising degrees of freedom to the flexural phonons in a thin elastic sheet can explain this unusual response. read less NOT USED (low confidence) P. Wojtoń, P. Wolski, K. Wolinski, and T. Panczyk, “Protonation of Cytosine-Rich Telomeric DNA Fragments by Carboxylated Carbon Nanotubes: Insights from Computational Studies.,” The journal of physical chemistry. B. 2021. link Times cited: 2 Abstract: In this work, we studied, using computational methods, the p… read moreAbstract: In this work, we studied, using computational methods, the protonation reactions of telomeric DNA fragments being due to interaction with carboxylated carbon nanotubes. The applied computational methodology is divided into two stages. (i) Using classical molecular dynamics, we generated states in which carboxyl groups are brought to the vicinity of nitrogen atoms within the cytosine rings belonging to the DNA duplex. (ii) From these states, we selected two systems for systematic quantum chemical studies aimed at the analysis of proton-transfer reactions between the carboxyl groups and nitrogen atoms within the cytosine rings. Results of molecular dynamics calculations led to the conclusion that sidewall-functionalized carbon nanotubes deliver carboxyl groups slightly more effectively than the on-tip-functionalized ones. The latter can provide carboxyl groups in various arrangements and more diverse quality of approach of carboxyl groups to the cytosines; however, the differences between various arrangements of carboxyl groups are still not big. It was generally observed that narrow nanotubes can access the cytosine pocket easier than wider ones. Quantum chemical calculations led however to the conclusion that a direct proton transfer from the carboxyl group to the nitrogen atom within the cytosine ring is impossible under normal conditions. Precisely, we detected either very high activation barrier for the proton-transfer reaction or instability of the reaction product, i.e., its spontaneous decomposition toward reaction substrates. read less NOT USED (low confidence) K. Cai, S. Sun, J. Shi, and Q. Qin, “Carbon-nanotube Nanomotor Driven by Graphene Origami,” Physical review applied. 2021. link Times cited: 4 NOT USED (low confidence) C. Sun, R. Zhou, Z. Zhao, and B. Bai, “Extending the Classical Continuum Theory to Describe Water Flow through Two-Dimensional Nanopores.,” Langmuir : the ACS journal of surfaces and colloids. 2021. link Times cited: 9 Abstract: Water flow through two-dimensional nanopores has attracted s… read moreAbstract: Water flow through two-dimensional nanopores has attracted significant attention owing to the promising water purification technology based on atomically thick membranes. However, the theoretical description of water flow in nanopores based on the classical continuum theory is very challenging owing to the pronounced entrance/exit effects. Here, we extend the classical Hagen-Poiseuille equation for describing the relationship between flow rate and pressure loss in laminar tube flow to two-dimensional nanopores. A totally theoretical model is established by appropriately considering the velocity slip on pore surfaces both in the friction pressure loss and entrance/exit pressure loss. Based on molecular dynamics simulations of water flow through graphene nanopores, it is shown that the model can not only well predict the overall flow rate but also give a good estimation of the velocity profiles. As the pore radius and length increase, the model can reduce to the equations applicable to the fluid flow in infinitely/finitely long nanotubes, thin orifices, and macroscale tubes, showing an accurate prediction of the existing experimental and simulation data of the water flow through nanotubes and nanopores in the literature. Namely, the presented model is a unified model that can uniformly describe the fluid flow from nanoscales to macroscales by modifying the classical continuum theory. read less NOT USED (low confidence) Y. Zeng, Y.-X. Feng, L.-M. Tang, and K. Chen, “Effect of out-of-plane strain on the phonon structures and anharmonicity of twisted multilayer graphene,” Applied Physics Letters. 2021. link Times cited: 34 Abstract: Twisted bilayer and multilayer two-dimensional materials lin… read moreAbstract: Twisted bilayer and multilayer two-dimensional materials linked by van der Waals interactions exhibit various unique physical properties. The phonon properties of such systems are of great importance, but have not been explored in detail. In this work, we use a hybrid neural-network potential to systematically investigate the evolution of the phonon structure of twisted multilayer graphene under out-of-plane strain. With increasing out-of-plane strain, the evolution of the phonon structure of the moire superlattice exhibits different behavior from that of AA and AB stacked multilayer graphene. Meanwhile, with twisting of the interlayer, a higher Gruneisen parameter and a lower phonon group velocity can be obtained. A possible method is revealed by which phonon anharmonic scattering in stacked multilayer graphene could be enhanced by varying the twist angle in combination with out-of-plane strain. Our work shows that the application of out-of-plane strain can serve as an effective way to amplify the effect of twist angle on phonon structures of twisted multilayer two-dimensional systems, with potential application to thermoelectric and thermal logical devices. read less NOT USED (low confidence) K. Skrobas, K. Stefanska-Skrobas, S. Stelmakh, S. Gierlotka, and B. Palosz, “Surface free energy of diamond nanocrystals - a molecular dynamics study of its size dependence.,” Physical chemistry chemical physics : PCCP. 2021. link Times cited: 4 Abstract: The dependency of the surface free energy (SFE) of diamond n… read moreAbstract: The dependency of the surface free energy (SFE) of diamond nanocrystals on particle size was studied by means of molecular dynamics (MD) and DFT simulations. It was demonstrated how to avoid the ambiguities in calculating the surface area of very small crystallites by expressing the particle size in terms of the number of atoms which we called the number of atoms convention (NAC) rather than in units of length. The NAC method was applied to a set of models terminated with either (100) or (111) crystal faces. The MD simulations were done for two widely used potentials, i.e. Tersoff and AIREBO. Both potentials show appreciable changes in surface free energy with decreasing crystal size but in opposite directions. In the limit of an infinite crystal both tested potentials give the energy of the (100) surface to be more than two times higher than that of the (111) surface. Also the absolute figures calculated from the AIREBO potential are twice larger than those from the Tersoff potential. DFT simulations of the selected small particles confirmed the MD calculations based on the AIREBO results for the (111) surface but for the (100) surface the values were considerably smaller. read less NOT USED (low confidence) T. Li et al., “Non-retraction rebound of the impacting nano-droplets,” Journal of Molecular Liquids. 2021. link Times cited: 8 NOT USED (low confidence) A. J. Lew, C.-H. Yu, Y.-C. Hsu, and M. Buehler, “Deep learning model to predict fracture mechanisms of graphene,” npj 2D Materials and Applications. 2021. link Times cited: 38 NOT USED (low confidence) M. J. Tolladay, F. Scarpa, and N. Allan, “Interatomic forces breaking carbon-carbon bonds,” Carbon. 2021. link Times cited: 5 NOT USED (low confidence) Y.-C. Wang, Y. Zhu, and H. Wu, “Formation and topological structure of three-dimensional disordered graphene networks.,” Physical chemistry chemical physics : PCCP. 2021. link Times cited: 7 Abstract: Disordered graphene networks (DGNs) can be regarded as the t… read moreAbstract: Disordered graphene networks (DGNs) can be regarded as the three-dimensional (3D) assembly of graphene-like fragments at the nanoscale, in which some intrinsic topological features are usually hidden in these formless fragments without clear understanding. Although some high-resolution structural patterns have been observed in pyrolytic carbons and flash graphene experimentally, it is still hard to characterize the topology and texture of DGNs considering continuous 3D connectivity. Toward this end, starting from the annealing process, we herein performed molecular dynamics simulations to investigate the formation and topological structure of DGNs. Three typical stages are found during the formation of DGNs, that is, the formation of polyaromatic fragments, formation of a disordered framework, and further graphitization. The topology of the obtained DGNs was then investigated, including topological defects, stacking behavior, and global curvature. Several typical in-plane and out-of-plane topological defects are found to connect the 3D network of graphene-like layers. The computed X-ray diffraction and angular defects demonstrate that a high-density DGN tends to form a randomly stacked structure with more connections, while a low-density DGN exhibits more bowl-shaped layers and a less distorted curvature. At low annealing temperatures, the local curvature of DGNs is highly distorted, and the structure seems to lack graphitization compared to high-temperature ones. read less NOT USED (low confidence) D. Chen and L. Shao, “Using irradiation-induced defects as pinning sites to minimize self-alignment in twisted bilayer graphene,” Applied Physics Letters. 2021. link Times cited: 4 Abstract: Preparing bi-layer graphene under a magic twisting angle of … read moreAbstract: Preparing bi-layer graphene under a magic twisting angle of ∼1.1° has been challenging due to its strong tendency for self-alignment. We propose a method to pin graphene layers and minimize their self-rotation when positioned close to each other. The feasibility is demonstrated by the present study using molecular dynamics simulations. C60 clusters are used to bombard two individual graphene layers, creating damage on both layers. When two irradiated layers are moving closer to each other, defects from irradiation damaged zones can interact with each other, hence acting as pinning sites to immobilize graphene and minimize rotation or gliding. Dangling bonds from defective regions of each plane induce the formation of sp bonds. Upon sliding, the bond is strong enough to induce the formation of one-dimensional carbon single chain, acting as a thread to constrain the relative movements. read less NOT USED (low confidence) S. Ajori, S. H. Boroushak, R. Hassani, and R. Ansari, “A molecular dynamics study on the buckling behavior of x-graphyne based single- and multi-walled nanotubes,” Computational Materials Science. 2021. link Times cited: 7 NOT USED (low confidence) H. Zhan et al., “Carbon nanothreads enable remarkable enhancement in the thermal conductivity of polyethylene.,” Nanoscale. 2021. link Times cited: 6 Abstract: Polymer nanocomposites with high thermal conductivity have b… read moreAbstract: Polymer nanocomposites with high thermal conductivity have been increasingly sought after in the electronic industry. Based on molecular dynamics simulations, this work assesses the thermal transport in polyethylene (PE) nanocomposites with the presence of a new one-dimensional nanofiller-a carbon nanothread (NTH). It is found that the axial thermal conductivity of PE nanocomposites increases linearly with the content of regularly aligned NTH fillers, while the aggregated pattern suppresses the enhancement effect. This phenomenon is explained by a stronger filler-filler interaction that reduces the intrinsic thermal conductivity of the NTH. Results show that the randomly dispersed NTHs can hardly promote heat transfer because effective heat transfer channels are lacking. Strikingly, surface functionalization has an adverse effect on the thermal conductivity due to the presence of additional voids. The presence of voids answers a long-standing open question that functionalization of the heat conductive filler only slightly improves the thermal conductivity of the polymer composite. Additionally, the transverse thermal conductivity degrades in the presence of the NTH and exhibits no clear correlation with the filler content or the distribution pattern. Overall, this study provides an in-depth understanding of the heat transfer within the polymer nanocomposites, which opens up possibilities for the preparation of highly conductive polymers. read less NOT USED (low confidence) E. Penev, N. Marzari, and B. Yakobson, “Theoretical Prediction of Two-Dimensional Materials, Behavior, and Properties.,” ACS nano. 2021. link Times cited: 23 Abstract: Predictive modeling of two-dimensional (2D) materials is at … read moreAbstract: Predictive modeling of two-dimensional (2D) materials is at the crossroad of two current rapidly growing interests: 2D materials per se, massively sought after and explored in experimental laboratories, and materials theoretical-computational models in general, flourishing on a fertile mix of condensed-matter physics and chemistry with advancing computational technology. Here the general methods and specific techniques of modeling are briefly overviewed, along with a somewhat philosophical assessment of what "prediction" is, followed by selected practical examples for 2D materials, from structures and properties, to device functionalities and synthetic routes for their making. We conclude with a brief sketch-outlook of future developments. read less NOT USED (low confidence) R. Zhao, H. Yin, L. Wang, and Q. Yue, “Multiple stable dynamic responses based on interlayer and edge coupling effect in carbon nanotube transmission system,” Computational Materials Science. 2021. link Times cited: 2 NOT USED (low confidence) J. Bian and L. Nicola, “On the lubrication of rough copper surfaces with graphene,” Tribology International. 2021. link Times cited: 12 NOT USED (low confidence) D. Hedman, T. Rothe, G. Johansson, F. Sandin, J. Larsson, and Y. Miyamoto, “Impact of training and validation data on the performance of neural network potentials: A case study on carbon using the CA-9 dataset.” 2021. link Times cited: 3 NOT USED (low confidence) F. Meng et al., “Negative Poisson’s ratio in graphene Miura origami,” Mechanics of Materials. 2021. link Times cited: 10 NOT USED (low confidence) C. Cabrillo et al., “Formation of one-dimensional quantum crystals of molecular deuterium inside carbon nanotubes,” Carbon. 2021. link Times cited: 3 NOT USED (low confidence) Z. Xiong, T. Zhang, and X. Li, “Analytical Models for Predicting the Nonlinear Stress–Strain Relationships and Behaviors of Two-Dimensional Carbon Materials,” Journal of Applied Mechanics. 2021. link Times cited: 1 Abstract:
Due to having a single atom layer, two-dimensional (2D) ma… read moreAbstract:
Due to having a single atom layer, two-dimensional (2D) materials represented by graphene monolayers exhibit unique and excellent mechanical properties, such as ultrahigh moduli and strengths. A large number of experiments and atomistic simulations have demonstrated nonlinear stress–strain responses. However, there is no theoretical model that analytically describes the relationships between nonlinear mechanical properties and interatomic interaction parameters of 2D materials. Here, we developed a nonlinear stick-spiral model for four typical 2D materials (including graphene, γ-graphyne, β-graphyne, and hexagonal boron nitride) based on a molecular mechanics model. By using the perturbation method, we derived a series of analytical expressions for nonlinear stress–strain relationships and elastic constants of these 2D materials under uniaxial tension along the zigzag and armchair directions. Our analytic models indicated that both Young’s moduli and Poisson’s ratios of these 2D materials are isotropic and dominate the linear elastic deformation, while their third-order moduli are orientation-dependent and essentially characterize the nonlinear stress–strain responses. The nonlinear stress–strain relationships, elastic constants, and atomic behaviors (such as bond elongation and bond angle variation during deformation) predicted from our analytical models are in good agreement with those from atomistic simulations and previous experiments. Our analytical models further demonstrated that the mechanical properties and behaviors of 2D materials are linked with their bonding and atomic structures (from a quantitative perspective) and are mainly determined by stiffnesses for bond stretching, angle variation, and bond lengths. Our current study provides an effective and accurate analytical approach for investigating the nonlinear behaviors of 2D materials. read less NOT USED (low confidence) Y. Magnin, F. Rondepierre, W. Cui, D. Dunstan, and A. San-Miguel, “Collapse phase diagram of carbon nanotubes with arbitrary number of walls. Collapse modes and macroscopic analog,” Carbon. 2021. link Times cited: 14 NOT USED (low confidence) S. Zhang, F. Wang, and P. Huang, “Enhanced Hall-Petch strengthening in graphene/Cu nanocomposites,” Journal of Materials Science & Technology. 2021. link Times cited: 24 NOT USED (low confidence) A. M. Evans et al., “Thermally conductive ultra-low-k dielectric layers based on two-dimensional covalent organic frameworks,” Nature Materials. 2021. link Times cited: 102 NOT USED (low confidence) H. Wei et al., “Impacts from the stacking morphology on the tensile performance of double-walled carbon nanotube bundles,” Carbon. 2021. link Times cited: 5 NOT USED (low confidence) S. Wang et al., “Achieving anti-sintering of supported platinum nanoparticles using a thermal management strategy,” Science China Materials. 2021. link Times cited: 1 NOT USED (low confidence) H. Qin, G. Zhang, L. Qin, Y. Zhang, Y. Liu, and Q. Pei, “Temperature and Defect Effects on the Mechanical Properties of Pentadiamond,” Acta Materialia. 2021. link Times cited: 2 Abstract: Pentadiamond is a newly predicted 3D carbon allotrope by fir… read moreAbstract: Pentadiamond is a newly predicted 3D carbon allotrope by first-principles calculations. Using molecular dynamics simulations, we show that pentadiamond can keep structure stable at high temperatures up to 1100 K, but its fracture strength and fracture strain are very sensitive to temperature. As the temperature increases from 100 K to 900 K, the fracture strength and fracture strain decreases by 68.4% and 69.1%, respectively. We also find that the mono-vacancy and di-vacancy related to C2 position lead to stronger reduction in the fracture strength and fracture strain than the atomic vacancies at other positions. To be surprising, the mono-vacancy at C2position has stronger effect than the di-vacancy at C2-C3positions. Besides, we find that hydrogen functionalization has strong effect on the mechanical properties of pentadiamond. As the H-coverage increases from 0.0 to 1.0, the fracture strength and fracture strain drop by 75.7% and 76.6%, respectively. read less NOT USED (low confidence) L. M. Sandonas, A. R. Méndez, R. Gutierrez, G. Cuniberti, and V. Mujica, “Nanoscale Phononic Analog of the Ranque-Hilsch Vortex Tube,” Physical review applied. 2021. link Times cited: 1 Abstract: Thermal management is a current global challenge that must b… read moreAbstract: Thermal management is a current global challenge that must be addressed exhaustively. We propose the design of a nanoscale phononic analog of the Ranque-Hilsch vortex tube in which heat flowing at a given temperature is split into two different streams going to the two ends of the device, inducing a temperature asymmetry. Our nanoscale prototype consists of two carbon nanotubes (capped and open) connected by molecular chains. The results show that the structural asymmetry in the contact regions is the key factor for producing the flux asymmetry and, hence, the induced temperature-bias effect. The effect can be controlled by tuning the thermal-equilibration temperature, the number of chains, and the chain length. Deposition on a substrate adds another variable to the manipulation of the flux asymmetry but the effect vanishes at very large substrate temperatures. Our study yields insights into the thermal management in nanoscale materials, especially the crucial issue of whether the thermal asymmetry can survive phonon scattering over relatively long distances, and thus provides a starting point for the design of a nanoscale phononic analog of the Ranque-Hilsch vortex tube. read less NOT USED (low confidence) M. Li, L. Che, F. Li, Z. Guan, and Z. Kang, “Non-uniform self-folding of impure graphene,” International Journal of Mechanical Sciences. 2021. link Times cited: 4 NOT USED (low confidence) L. G. P. Martins et al., “Hard, transparent, sp3-containing 2D phase formed from few-layer graphene under compression,” Carbon. 2021. link Times cited: 25 NOT USED (low confidence) Z. Huo, Y. Chen, Z. Guo, and T. Chang, “Energy dissipation mechanism of commensurate graphene layers,” Science China Technological Sciences. 2021. link Times cited: 5 NOT USED (low confidence) J. Li, Y. Peng, X. Tang, Q. Xu, and L. Bai, “Effect of strain engineering on superlubricity in a double-walled carbon nanotube.,” Physical chemistry chemical physics : PCCP. 2021. link Times cited: 4 Abstract: Double-walled carbon nanotubes (DWCNTs) have received a grea… read moreAbstract: Double-walled carbon nanotubes (DWCNTs) have received a great deal of attention due to their great potential in the field of superlubricity. However, this superlubricity is susceptible to failure in practical applications due to the introduction of various defects. Here, a novel method based on strain engineering is employed for achieving superlubricity in the DWCNT using molecular dynamics simulations. The DWCNT exhibits a superlow friction force when an inner tube slides against a stretched outer tube even with a low content of defects. However, strain engineering shows its limitation on superlubricity in the case of a large magnitude of strain or a high content of point defects. The mechanism of superlubricity in the DWCNT could be explained by the analysis of the energy barrier. read less NOT USED (low confidence) A. Priyadarsini and B. Mallik, “Effects of Doped N, B, P, and S Atoms on Graphene toward Oxygen Evolution Reactions,” ACS Omega. 2021. link Times cited: 11 Abstract: Molecular oxygen and hydrogen can be obtained from the water… read moreAbstract: Molecular oxygen and hydrogen can be obtained from the water-splitting process through the electrolysis technique. However, harnessing energy is very challenging in this way due to the involvement of the 4e– reaction pathway, which is associated with a substantial amount of reaction barrier. After the report of the first N-doped graphene acting as an oxygen reduction reaction catalyst, the scientific community set out on exploring more reliable doping materials, better material engineering techniques, and developing computational models to explain the interfacial reactions. In this study, we modeled the graphene surface with four different nonmetal doping atoms N, B, P, and S individually by replacing a carbon atom from one of the graphitic positions. We report the mechanism of the complete catalytic cycle for each of the doped surfaces by the doping atom. The energy barriers for individual steps were explored using the biased first-principles molecular dynamics simulations to overcome the high reaction barrier. We explain the active sites and provide a comparison between the activation energy obtained by the application of two computational methods. Observing the rate-determining step, that is, oxo–oxo bond formation, S-doped graphene is the most effective. In contrast, N-doped graphene seems to be the least useful for oxygen evolution catalysis compared to the undoped graphene surface. B-doped graphene and P-doped graphene have an equivalent impact on the catalytic cycle. read less NOT USED (low confidence) K. Hasheminejad, A. Montazeri, and H. Hasheminejad, “Tailoring adhesion characteristics of poly(L-lactic acid)/graphene nanocomposites by end-grafted polymer chains: An atomic-level study,” European Polymer Journal. 2021. link Times cited: 3 NOT USED (low confidence) A. Agrawal and R. Mirzaeifar, “Copper-graphene composites; developing the MEAM potential and investigating their mechanical properties,” Computational Materials Science. 2021. link Times cited: 9 NOT USED (low confidence) M. Nikfar, E. Taati, and M. Asghari, “On the theoretical and molecular dynamic methods for natural frequencies of multilayer graphene nanosheets incorporating nonlocality and interlayer shear effects,” Mechanics of Advanced Materials and Structures. 2021. link Times cited: 4 Abstract: In this paper, a multiplate nonlocal shear model and molecul… read moreAbstract: In this paper, a multiplate nonlocal shear model and molecular dynamic simulations are presented to investigate the effects of interlayer shear and nonlocality on the natural frequencies of multilayer graphene sheets (MLGSs). From one aspect in the optimal design of such structures, the interaction between graphene layers, which can significantly vary the static and dynamic behavior due to lack of solidity of layers stack, should be considered. On the other hand, it is requied that the nonlocality phenomenon which has an effective role in the mechanical analysis of nanostructures is taken into account. To this aim, the equation of motion along with corresponding boundary conditions is derived by using the Kirchhoff plate model and nonlocal continuum theory to capture these effects. For a case study, the free vibration problem of simply supported MLGSs is studied by presenting the closed-form Navier’s solution of natural frequencies and carrying out Molecular dynamics (MD) simulations to estimate the value of nonlocal parameter. Finally, the influences of interlayer shear modulus, number of layers, foundation stiffness, and nonlocal parameter on the natural frequencies of such MLGSs are examined in detail. Findings show that natural frequencies including nonlocality effect become smaller than ones of the classical continuum theory and also have good agreements with MD simulations. Moreover, it is seen that the sensitivity of natural frequency to the nonlocal parameter becomes more significant when the number of layers or interlayer shear modulus increases as well as the aspect ratio or width of sheets decreases. read less NOT USED (low confidence) D. M. Purohit and A. Deoghare, “Computational Analysis of the Effect of Boron and Nitrogen Dopants on the Mechanical Properties of Graphene with Single Vacancy Defects,” Lecture Notes in Mechanical Engineering. 2021. link Times cited: 0 NOT USED (low confidence) Y. Du, J. Zhou, P. Ying, and J. Zhang, “Effects of cell defects on the mechanical and thermal properties of carbon honeycombs,” Computational Materials Science. 2021. link Times cited: 5 NOT USED (low confidence) O. Yenigun and M. Barisik, “Local Heat Transfer Control using Liquid Dielectrophoresis at Graphene/Water Interfaces,” International Journal of Heat and Mass Transfer. 2021. link Times cited: 4 NOT USED (low confidence) L. Cui, G. Wei, Z. Li, and X. Du, “Thermal Transport in Graphene Nanomesh: Unraveling the Role of Brillouin Zone Folding, Phonon Localization and Phonon Confinement,” International Journal of Heat and Mass Transfer. 2021. link Times cited: 13 NOT USED (low confidence) C. Cho et al., “Strain-resilient electrical functionality in thin-film metal electrodes using two-dimensional interlayers,” Nature electronics. 2021. link Times cited: 45 NOT USED (low confidence) A. Chaurasia, R. S. Mulik, and A. Parashar, “Polymer-based nanocomposites for impact loading: A review,” Mechanics of Advanced Materials and Structures. 2021. link Times cited: 15 Abstract: The aim of this article is to review the solution and challe… read moreAbstract: The aim of this article is to review the solution and challenges associated with high strain rate behavior of nanocomposites. Nanoclay, carbon nanotube, graphene, and inorganic nanofillers are most commonly used for developing nanocomposites with superior dynamical properties against high strain rate loading. Higher specific properties, thermal stability and large number of design variables makes nanofillers a potential candidate to replace conventional fibers in many applications that includes nanocomposites for space structures, defense vehicles and automobiles. Despite the many advantages associated with nanocomposites, their applications are still limited, due to inadequate knowledge of failure mechanism under different types of loading scenarios that includes static and dynamic behavior. In the present article, a comprehensive review of characterizing techniques used with nanocomposites is presented in conjunction with failure governing mechanism of organic as well as inorganic nanofillers reinforced nanocomposites. read less NOT USED (low confidence) H. Koh, S. Chiashi, J. Shiomi, and S. Maruyama, “Heat diffusion-related damping process in a highly precise coarse-grained model for nonlinear motion of SWCNT,” Scientific Reports. 2021. link Times cited: 3 NOT USED (low confidence) X. Zhang and A. Beyer, “Mechanics of free-standing inorganic and molecular 2D materials.,” Nanoscale. 2021. link Times cited: 14 Abstract: The discovery of graphene has triggered a great interest in … read moreAbstract: The discovery of graphene has triggered a great interest in inorganic as well as molecular two-dimensional (2D) materials. In this review, we summarize recent progress in the mechanical characterization of free-standing 2D materials, such as graphene, hexagonal boron nitride (hBN), transition metal-dichalcogenides, MXenes, black phosphor, carbon nanomembranes (CNMs), 2D polymers, 2D metal organic frameworks (MOFs) and covalent organic frameworks (COFs). Elastic, fracture, bending and interfacial properties of these materials have been determined using a variety of experimental techniques including atomic force microscopy based nanoindentation, in situ tensile/fracture testing, bulge testing, Raman spectroscopy, Brillouin light scattering and buckling-based metrology. Additionally, we address recent advances of 2D materials in a variety of mechanical applications, including resonators, microphones and nanoelectromechanical sensors. With the emphasis on progress and challenges in the mechanical characterization of inorganic and molecular 2D materials, we expect a continuous growth of interest and more systematic experimental work on the mechanics of such ultrathin nanomaterials. read less NOT USED (low confidence) Z. Huo, Y. Chen, Z. Guo, and T. Chang, “Energy dissipation mechanism of commensurate graphene layers,” Science China Technological Sciences. 2021. link Times cited: 0 NOT USED (low confidence) C. M. Shumeyko, X. Ge, C. Klingshirn, L. Salamanca-Riba, and D. Cole, “Tunable mechanical behavior of graphene nanoribbon-metal composites fabricated through an electrocharge-assisted process,” Materials Science and Engineering A-structural Materials Properties Microstructure and Processing. 2021. link Times cited: 3 NOT USED (low confidence) J. Comtet et al., “Anomalous interfacial dynamics of single proton charges in binary aqueous solutions,” Science Advances. 2021. link Times cited: 8 Abstract: Single-molecule localization microscopy reveals a marked inf… read moreAbstract: Single-molecule localization microscopy reveals a marked influence of solvation on interfacial proton charge dynamics. read less NOT USED (low confidence) W. Toh, E. Y. Ang, T. Ng, R. Lin, and Z. Liu, “An investigation on the effects of nanoplastic particles on nanoporous graphene membrane desalination,” Desalination. 2020. link Times cited: 6 NOT USED (low confidence) J.-Q. Zhu, X. Liu, X. Zhou, and Q. Yang, “Strengthening effect of graphene-edge dislocation interaction in graphene reinforced copper matrix composites,” Computational Materials Science. 2020. link Times cited: 11 NOT USED (low confidence) R. Arjun, B. Raghavan, and T. Gupta, “Role of pore geometry in gas separation using nanoporous graphene – A study in contrast between equilibrium and non-equilibrium cases,” Chemical Physics Letters. 2020. link Times cited: 2 NOT USED (low confidence) A. Capasso, F. Muñoz-Rojas, B. Gupta, N. Motta, and E. Placidi, “Double grain boundary configurations on graphite surfaces,” Carbon. 2020. link Times cited: 1 NOT USED (low confidence) K. Xia, H. Zhan, X. Zhang, and Z. Li, “Graphdiyne family-tunable solution to shock resistance,” Materials Research Express. 2020. link Times cited: 4 Abstract: The excellent mechanical properties of Graphdiyne (GDY) fami… read moreAbstract: The excellent mechanical properties of Graphdiyne (GDY) family has enabled it as an appealing candidate in the field of impact protection. In this in silico study, Monolayer GDY nanosheets of different morphology including GDY, GY-3, GY-4, GY-5 and GY-6 are assessed under hypervelocity impacts (from 1 to 6 km s−1). Tracking the deformation mechanisms under impacts as well as the Probability density function based on atomic Von Mises stress distribution, the length of acetylenic chain clearly alters ductile behavior as well as the energy dissipation/delocalization rate of GDY family during the impact. Results also suggest the penetration energy is not only determined by the energy delocalization rate but also sensitive to impact velocity for nanosheet with various acetylenic chain length. GY-5 with a much lower energy delocalization rate presents a close penetration energy comparing with GDY at a low impact at ∼2.0 km s−1, its superior ductility granted by long acetylenic chain not only dissipates kinetic energy of projectile via deformation, but also extends time for acceleration during the contact with projectile. Considering the impact resist performance of GDY family in terms of Specific penetration energy, GY-5 with the perfect balance between material density, ductility and Young’s modulus makes it the superior anti-ballistic material for impact velocity at <5 km s−1. For impact velocity >5 km s−1, it induces severer local deformation, and leaves no time for a well-developed distributed pattern as observed in a lower impact velocity scenario. As such, extensive elastic deformation of the nanosheet is not captured under impact, nanosheets with shorter acetylenic chains and hence greater material strength demonstrates superior impact resist. This study provides a fundamental understanding of the deformation and penetration mechanisms of monolayer GDY nanosheets under impact, which is crucial in order to facilitate their emerging applications for impact protection. read less NOT USED (low confidence) H. Washizu and H. Washizu, “界面の分子シミュレーションの基礎,” Journal of The Adhesion Society of Japan. 2020. link Times cited: 0 NOT USED (low confidence) S. Zhao, Y. Zhang, J. Yang, and S. Kitipornchai, “Improving interfacial shear strength between graphene sheets by strain-induced wrinkles,” Carbon. 2020. link Times cited: 35 NOT USED (low confidence) Z. Meng, Z. Wu, J. Carrete, and Z. Wang, “Twisted bilayer graphene as a linear nanoactuator,” Physical Review B. 2020. link Times cited: 3 NOT USED (low confidence) L. Wang, K. Cai, J. Shi, and Q. Qin, “Self-assembly of nano-scroll/nano-helix from a diamondene nanoribbon with one passivated surface,” Applied Surface Science. 2020. link Times cited: 3 NOT USED (low confidence) T. C. O’Connor and M. Robbins, “Molecular models for creep in oriented polyethylene fibers.,” The Journal of chemical physics. 2020. link Times cited: 3 Abstract: Highly oriented and crystalline polyetheylene (PE) fibers ha… read moreAbstract: Highly oriented and crystalline polyetheylene (PE) fibers have a large failure stress under rapid tensile loading but exhibit significant creep at much smaller stresses that limits applications. A possible mechanism is slip of chains due to stress-enhanced, thermally activated nucleation of dislocations at chain ends in crystalline regions. Molecular dynamics simulations are used to parameterize a Frenkel-Kontorova model that provides analytic expressions for the limiting stress and activation energy for dislocation nucleation as a function of stress. Results from four commonly used hydrocarbon potentials are compared to show that the qualitative behavior is robust and estimate quantitative uncertainties. In all cases, the results can be described by an Eyring model with values of the zero-stress activation energy Ea 0≈1.5 eV and activation volume V* ≈ 45 Å3 that are consistent with the experimental results for increasingly crystalline materials. The limiting yield stress is ∼8 GPa. These results suggest that activated dislocation nucleation at chain ends is an important mechanism for creep in highly oriented PE fibers. read less NOT USED (low confidence) J. Chen and C. Yang, “Effects of grain dimensions and edge states on the thermal conductivity of graphene ribbons,” Diamond and Related Materials. 2020. link Times cited: 3 NOT USED (low confidence) B. Yang, D. Li, H. Yang, J. Wang, and P. Yang, “Thermal conductivity enhancement of defective graphene nanoribbons,” International Communications in Heat and Mass Transfer. 2020. link Times cited: 8 NOT USED (low confidence) S. P. Patil, V. Parale, H. H. Park, and B. Markert, “Mechanical modeling and simulation of aerogels: A review,” Ceramics International. 2020. link Times cited: 23 NOT USED (low confidence) V. Gervilla, M. Zarshenas, D. Sangiovanni, and K. Sarakinos, “Anomalous versus Normal Room-Temperature Diffusion of Metal Adatoms on Graphene,” The Journal of Physical Chemistry Letters. 2020. link Times cited: 10 Abstract: Fabrication of high-performance heterostructure devices requ… read moreAbstract: Fabrication of high-performance heterostructure devices requires fundamental understanding of the diffusion dynamics of metal species on 2D materials. Here, we investigate the room-temperature diffusion of Ag, Au, Cu, Pd, Pt, and Ru adatoms on graphene using ab initio and classical molecular dynamics simulations. We find that Ag, Au, Cu, and Pd follow Lévy walks, in which adatoms move continuously within ∼1–4 nm2 domains during ∼0.04 ns timeframes, and they occasionally perform ∼2–4 nm flights across multiple surface adsorption sites. This anomalous diffusion pattern is associated with a flat (<50 meV) potential energy landscape (PEL), which renders surface vibrations important for adatom migration. The latter is not the case for Pt and Ru, which encounter a significantly rougher PEL (>100 meV) and, hence, migrate via conventional random walks. Thus, adatom anomalous diffusion is a potentially important aspect for modeling growth of metal films and nanostructures on 2D materials. read less NOT USED (low confidence) J. Karnes, T. Weisgraber, J. Oakdale, M. Mettry, M. Shusteff, and J. Biener, “On the Network Topology of Crosslinked Acrylate Photopolymers: A Molecular Dynamics Case Study.,” The journal of physical chemistry. B. 2020. link Times cited: 15 Abstract: A reactive molecular dynamics approach is used to simulate c… read moreAbstract: A reactive molecular dynamics approach is used to simulate crosslinking of acrylate polymer networks. By employing the same force field and reactive scheme and studying three representative multifunctional acrylate monomers we isolate the importance of the nonreactive moieties within these model monomers. Analyses of reactive trajectories benchmark the estimated gel points, cyclomatic character, and spatially-resolved crosslinking tendencies of the acrylates as a function of conversion. These insights into the similarities and differences of the polymerization and resulting networks suggest molecular mechanics as a useful tool in the rational design of photopolymerization resins. read less NOT USED (low confidence) N. Wei, Y. Chen, Y. Zhang, J.-C. Zheng, J. Zhao, and Y. Mai, “Crease-induced targeted cutting and folding of graphene origami,” Carbon. 2020. link Times cited: 7 NOT USED (low confidence) S. Kumar, T. Mishra, and A. Mahata, “Manipulation of mechanical properties of monolayer molybdenum disulfide: Kirigami and hetero-structure based approach,” Materials Chemistry and Physics. 2020. link Times cited: 4 NOT USED (low confidence) F. Li, H. Li, M. Li, and Z. Kang, “Mechanics of folding of nanorings,” Mechanics of Materials. 2020. link Times cited: 2 NOT USED (low confidence) Y. Liu et al., “Bulk nanolaminated graphene (reduced graphene oxide)–aluminum composite tolerant of radiation damage,” Acta Materialia. 2020. link Times cited: 27 NOT USED (low confidence) R. Babicheva et al., “Characterization of two carbon allotropes, cyclicgraphene and graphenylene, as semi-permeable materials for membranes,” Materials Science and Engineering B-advanced Functional Solid-state Materials. 2020. link Times cited: 17 NOT USED (low confidence) L. Li, R. Sun, Y. Zhang, S. Kitipornchai, and J. Yang, “Mechanical behaviours of graphene reinforced copper matrix nanocomposites containing defects,” Computational Materials Science. 2020. link Times cited: 9 NOT USED (low confidence) H. Qin, Y. Yan, H. Liu, J. Liu, Y.-W. Zhang, and Y. Liu, “Modified Timoshenko beam model for bending behaviors of layered materials and structures,” Extreme Mechanics Letters. 2020. link Times cited: 10 NOT USED (low confidence) M. Liu, X. Ye, Y. Bai, R. Zhang, F. Wei, and X. Li, “Multi-scale analysis of the interaction in ultra-long carbon nanotubes and bundles,” Journal of The Mechanics and Physics of Solids. 2020. link Times cited: 13 NOT USED (low confidence) P. Chen, Y. Li, J. Peng, F. Gao, and Z. Li, “An inspired nanoscale system to evaluate interfacial behavior of layered structures,” Computational Materials Science. 2020. link Times cited: 3 NOT USED (low confidence) T. C. Sagar, V. Chinthapenta, and M. Horstemeyer, “Effect of defect guided out-of-plane deformations on the mechanical properties of graphene,” Fullerenes, Nanotubes and Carbon Nanostructures. 2020. link Times cited: 5 Abstract: In this paper, nanoscale mechanical properties and failure b… read moreAbstract: In this paper, nanoscale mechanical properties and failure behavior of graphene with Stone-Wales defect concentration were investigated using molecular dynamics simulations with the latest ReaxFFC-2013 potential that can accurately capture bond breakages of graphitic compounds. The choice of interatomic potential plays an essential role in capturing the deformation mechanism accurately. Stable configuration of two-dimensional graphene experiences out-of-plane deformation leading to ripples and wrinkles in graphene. It is observed that the mechanical properties such as Young’s modulus, ultimate tensile strength, and the fracture strain are dependent on the out-of-plane deformation, temperature, defect concentration, defect orientation, defect layout and loading configuration. It is observed that the post transient phase non-homogenous ripples and wrinkles influence the mechanical properties at low and high defect concentrations, respectively. read less NOT USED (low confidence) S. Zhang and S. X. Hu, “Species Separation and Hydrogen Streaming upon Shock Release from Polystyrene under Inertial Confinement Fusion Conditions.,” Physical review letters. 2020. link Times cited: 8 Abstract: Shock release from inertial confinement fusion (ICF) shells … read moreAbstract: Shock release from inertial confinement fusion (ICF) shells poses a great challenge to single-fluid hydrodynamic equations, especially for describing materials composed of different ion species. This has been evidenced by a recent experiment [Haberberger et al., Phys. Rev. Lett. 123, 235001 (2019)PRLTAO0031-900710.1103/PhysRevLett.123.235001], in which low-density plasmas (10^{19} to 10^{20} cm^{-3}) are measured to move far ahead of what radiation-hydrodynamic simulations predict. To understand such experimental observations, we have performed large-scale nonequilibrium molecular-dynamics simulations of shock release in polystyrene (CH) at experimental conditions. These simulations revealed that upon shock releasing from the back surface of a CH foil, hydrogen can stream out of the bulk of the foil due to its mass being lighter than carbon. This released hydrogen, exhibiting a much broader velocity distribution than carbon, forms low-density plasmas moving in nearly constant velocities ahead of the in-flight shell, which is in quantitative agreement with the experimental measurements. Such kinetic effect of species separation is currently missing in single-fluid radiation-hydrodynamics codes for ICF simulations. read less NOT USED (low confidence) P. R. Patel, S. Sharma, and S. Tiwari, “A molecular dynamics investigation for predicting the effect of various parameters on the mechanical properties of carbon nanotube–reinforced aluminum nanocomposites,” Journal of Molecular Modeling. 2020. link Times cited: 4 NOT USED (low confidence) M. Dewapriya, R. Rajapakse, and W. Dias, “Characterizing fracture stress of defective graphene samples using shallow and deep artificial neural networks,” Carbon. 2020. link Times cited: 27 NOT USED (low confidence) C. E. Athanasiou et al., “High toughness carbon-nanotube-reinforced ceramics via ion-beam engineering of interfaces,” Carbon. 2020. link Times cited: 17 NOT USED (low confidence) Z. Wei, W. Ju, K. Bi, J. Yang, and Y. Chen, “Significant enhancement of thermal boundary conductance in graphite/Al interface by ion intercalation,” International Journal of Heat and Mass Transfer. 2020. link Times cited: 11 NOT USED (low confidence) W. Ouyang, H. Qin, M. Urbakh, and O. Hod, “Controllable Thermal Conductivity in Twisted Homogeneous Interfaces of Graphene and Hexagonal Boron Nitride,” Nano Letters. 2020. link Times cited: 41 Abstract: Thermal conductivity of homogeneous twisted stacks of graphi… read moreAbstract: Thermal conductivity of homogeneous twisted stacks of graphite is found to strongly depend on the misfit angle. The underlying mechanism relies on the angle dependence of phonon–phonon couplings across the twisted interface. Excellent agreement between the calculated thermal conductivity of narrow graphitic stacks and corresponding experimental results indicates the validity of the predictions. This is attributed to the accuracy of interlayer interaction descriptions obtained by the dedicated registry-dependent interlayer potential used. Similar results for h-BN stacks indicate overall higher conductivity and reduced misfit angle variation. This opens the way for the design of tunable heterogeneous junctions with controllable heat-transport properties ranging from substrate-isolation to efficient heat evacuation. read less NOT USED (low confidence) S. Carr, S. Fang, and E. Kaxiras, “Electronic-structure methods for twisted moiré layers,” Nature Reviews Materials. 2020. link Times cited: 133 NOT USED (low confidence) R. Brandolt and R. Paupitz, “Theoretical study of collision dynamics of fullerenes on graphenylene and porous graphene membranes.,” Journal of molecular graphics & modelling. 2020. link Times cited: 3 NOT USED (low confidence) E. Wagemann, S. Misra, S. Das, and S. Mitra, “Quantifying water friction in misaligned graphene channels under Ångström confinements.,” ACS applied materials & interfaces. 2020. link Times cited: 8 Abstract: Two-dimensional (2D) materials, such as graphene (GE), hold … read moreAbstract: Two-dimensional (2D) materials, such as graphene (GE), hold great potential to be employed as the fundamental building blocks of novel nanofluidic devices for a wide range of applications. Recent advances in experimental techniques are materializing such prospects by enabling the assembly of 2D-materials-based fluidic channels with heights as small as few Ångströms. Here, we conduct molecular dynamics simulations to probe the effect of the relative misalignment between the walls of GE fluidic channel with Ångströms height on the resistance to water transport through the channel. Two types of misalignments are studied, namely translational and rotational misalignments. Our results show that the relative misalignment of the GE lattices can lead to substantial reduction in the friction between water and the channel walls. Moreover, a dependence of the friction on the degree of misalignment and flow direction is found for the cases with translational misalignment. In contrast, the resistance exerted by the channels with rotational misalignment is found to be independent of the rotation angle (θ) for 0◦ < θ < 60◦, but always lower than the perfectly aligned case. We associate such lowering of the resistance to water transport to the corrugation and the anisotropy in the corresponding potential energy landscape associated with each degree of misalignment. The findings, therefore, point to an unprecedented possibility of significantly enhancing the water transport in Ångströms-height GE channels by engineering the misalignments of the GE channel walls. read less NOT USED (low confidence) I. Evazzade, I. Lobzenko, O. Golubev, and E. Korznikova, “Two-phase tension of a carbon nanotube.” 2020. link Times cited: 3 Abstract: Heterostructures consisting of new two-dimensional nanomater… read moreAbstract: Heterostructures consisting of new two-dimensional nanomaterials may possess non-trivial physical and mechanical properties, promising for many applications. It is interesting that in some cases it... read less NOT USED (low confidence) A. Nemati, H. N. Pishkenari, A. Meghdari, and S. Ge, “Influence of Vacancies and Grain Boundaries on the Diffusive Motion of Surface Rolling Molecules,” Journal of Physical Chemistry C. 2020. link Times cited: 7 Abstract: Molecular machines and surface rolling molecules show great … read moreAbstract: Molecular machines and surface rolling molecules show great potential to accomplish different tasks in several fields, such as bottom-up assembly and nano-manipulation. Many researchers have invest... read less NOT USED (low confidence) E. Oliveira and D. S. Galvao, “Schwarzites to schwarzynes: A new class of superdeformable materials,” MRS Advances. 2020. link Times cited: 2 Abstract: In this work, we have investigated the structural and mechan… read moreAbstract: In this work, we have investigated the structural and mechanical properties of a new class of soft and superelastic materials, called schwarzynes. These materials are obtained by inserting sp carbon atoms (acetylenic groups) into the schwarzite framework. Using fully atomistic molecular dynamics simulations with the AIREBO force field, our results show that schwarzynes are stable materials up to high temperatures (1000K). Schwarzynes exhibit a very wide elastic regime, some of them up to 70% strain without structural fractures. Our preliminary results show that the elastic properties can be easily engineered by tuning the number of acetylenic groups and the crystallographic directions where they are inserted. read less NOT USED (low confidence) G. Zhou, B. Nebgen, N. Lubbers, W. Malone, A. Niklasson, and S. Tretiak, “GPU-Accelerated Semi-Empirical Born Oppenheimer Molecular Dynamics using PyTorch.,” Journal of chemical theory and computation. 2020. link Times cited: 13 Abstract: A new open-source high-performance implementation of Born Op… read moreAbstract: A new open-source high-performance implementation of Born Oppenheimer Molecular Dynamics based on semi-empirical quantum mechanics models using PyTorch called PYSEQM is presented. PYSEQM was designed to provide researchers in computational chemistry with an open-source, efficient, scalable, and stable quantum-based molecular dynamics engine. In particular, PYSEQM enables computation on modern GPU hardware, and, through the use of automatic differentiation, supplies interfaces for model parameterization with machine learning techniques to perform multi-objective training and prediction. The implemented semi-empirical quantum mechanical methods (MNDO, AM1, PM3) are described. Additional algorithms include a recursive Fermi-operator expansion scheme (SP2) and Extended Lagrangian Born-Oppenheimer molecular dynamics allowing for rapid simulations. Finally, benchmark testing on the nanostar dendrimer and series of polyethylene molecules provide a baseline of code efficiency, time cost, and scaling and stability of energy conservation that verify that PYSEQM provides fast and accurate computations. read less NOT USED (low confidence) B. Song, K. Cai, J. Shi, and Q. Qin, “Rotation-induced axial oscillation of a composite nanoconvertor at low temperature,” Journal of Vibration and Control. 2020. link Times cited: 1 Abstract: We propose a model of a nanostructure which can transform an… read moreAbstract: We propose a model of a nanostructure which can transform an input rotation into an output oscillation. In the model, the rotor has two identical internally hydrogenated deformable parts. The mechanism is that the rotation-induced centrifugal force and van der Waals force drive the recoverable deformation of the hydrogenated deformable parts, which gives rise to the axial translation of the free end of the rotor. Once the two hydrogenated deformable parts deform periodically, the free end of the rotor oscillates periodically in the axial direction. Molecular dynamics simulations are conducted to reveal the dynamic response of the system at low temperature. Four main types of deformation and the first three orders of vibration responses of the hydrogenated deformable parts are analyzed. Synchronous breathing vibration of the two hydrogenated deformable parts produces ideal oscillation with large amplitude. Asynchronous axial vibration of the hydrogenated deformable parts reduces the oscillation amplitude or produces beat vibration. The way to control the amplitude of the axial oscillation/vibration is given. read less NOT USED (low confidence) S. V. Erohin, L. Chernozatonskii, and P. Sorokin, “On the Edge of Bilayered Graphene: Unexpected Atomic Geometry and Specific Electronic Properties.,” The journal of physical chemistry letters. 2020. link Times cited: 4 Abstract: The tendency of bilayered graphene edges to connect with eac… read moreAbstract: The tendency of bilayered graphene edges to connect with each other allows to create hollow sp2-hybridized material with specific electronic properties. However, unknown geometry of the formed edges hinders the further investigation. Here we show that closed bigraphene edge can be represented as connection of generally misoriented graphene domains with topological defects and further described by grain boundary theory. Energy dependence of closed edges of commensurate twisted bilayered graphene is derived for any twist angle and edge orientation. Our findings allow to predict what particular edge types appear in the bilayered graphene holes and explain the structure of the connected bilayered graphene edges which are often observed in the experiment. read less NOT USED (low confidence) Y. Zeng, D. Wu, X.-H. Cao, Y.-X. Feng, L. Tang, and K. Chen, “Significantly enhanced thermoelectric performance of molecular junctions by the twist angle dependent phonon interference effect,” Journal of Materials Chemistry. 2020. link Times cited: 24 Abstract: Suppressing phonon thermal conductance is one of the most im… read moreAbstract: Suppressing phonon thermal conductance is one of the most important ways to improve the thermoelectric efficiency. In the present work, we theoretically analyze the phonon transport properties in the intermediately coupled molecular junction. We show that the twist angle can serve as an independent degree of freedom to manipulate phonon interference and then more precisely regulate the thermal conductance of molecular junctions. Moreover, the phonon mode-resolved calculation indicates that the conduction of in-plane phonon modes is strongly blocked, and only the out-of-plane phonon modes can be transported through the molecular junction. This makes it possible to further suppress the phonon thermal conductance with the twist angle and then significantly improve the thermoelectric figure-of-merit of intermediately coupled molecular junctions. This result suggests a more convenient way to manipulate heat transport, which has potential applications in phononic and thermoelectric molecular devices. read less NOT USED (low confidence) S. P. Patil, P. Shendye, and B. Markert, “Molecular Investigation of Mechanical Properties and Fracture Behavior of Graphene Aerogel.,” The journal of physical chemistry. B. 2020. link Times cited: 19 Abstract: An unusual combination of ultralight-weight and outstanding … read moreAbstract: An unusual combination of ultralight-weight and outstanding mechanical properties of graphene aerogel made it popular for a wide range of applications in the fields of material science, energy and technology. In the present work, the mechanical properties and fracture behavior of graphene aerogels, which are highly brittle in nature, are investigated using molecular dynamics (MD) simulations. In tensile tests, elastic modulus and tensile strength exhibit a power-law dependence on the density with their exponents predicted to be 2.95±0.05 and 1.61±0.04, respectively, which are in an excellent agreement with the reported works in the literature. In the compression simulations, Lennard-Jones contribution in the AIREBO potential is vital to predicting early densification. Moreover, in the compression loading-unloading simulations, as the density decreases, the dissipation energy increases. At the onset of the crack propagation, as the crack length to height ratio increases, the fracture strength decreased. However, for a considered range of the ratios, the fracture toughness values were nearly constant for all densities. Furthermore, the fracture toughness shows a power-law dependence on the density, with the exponent estimated to be 1.41±0.04. The outcome of this work is a vital step in the in-depth understanding of nanomechanics while designing advanced, highly porous materials. read less NOT USED (low confidence) B. Mortazavi, E. Podryabinkin, S. Roche, T. Rabczuk, X. Zhuang, and A. Shapeev, “Machine-learning interatomic potentials enable first-principles multiscale modeling of lattice thermal conductivity in graphene/borophene heterostructures,” Materials Horizons. 2020. link Times cited: 81 Abstract: We highlight that machine-learning interatomic potentials tr… read moreAbstract: We highlight that machine-learning interatomic potentials trained over short AIMD trajectories enable first-principles multiscale modeling, bridging DFT level accuracy to the continuum level and empowering the study of complex/novel nanostructures. read less NOT USED (low confidence) N. Dasgupta, D. Yilmaz, and A. V. van Duin, “Simulations of the Biodegradation of Citrate Based Polymers for Artificial Scaffolds Using Accelerated Reactive Molecular Dynamics.,” The journal of physical chemistry. B. 2020. link Times cited: 11 Abstract: In this study, we investigate the reactivity and mechanical … read moreAbstract: In this study, we investigate the reactivity and mechanical properties of poly(1,6-hexanediol-co-Citric acid) via ReaxFF molecular dynamics simulations. We implement an accelerated scheme within the ReaxFF framework to study the hydrolysis reaction of the polymer which is provided with sufficient amount of energy known as the restrain energy after a suitable pre-transition state configuration is obtained to overcome the activation energy barrier and the desired product is obtained. The validity of the ReaxFF force field is established by comparing the ReaxFF energy barriers of ester and ether hydrolysis with benchmark DFT values in literature. We perform chemical and mechanical degradation of polymer chain bundles at 300 K. We find that ester hydrolyzes faster than ether due to lower activation energy barrier of the reaction. The selectivity of the bond-boost scheme has been demonstrated by lowering the boost parameters of the accelerated simulation which almost stops the ether hydrolysis. Mechanical degradation of pre-hydrolyzed and intermittent hydrolyzed polymer bundles is performed along the longitudinal direction at two different strain rates. We find that the tensile modulus of the polymers are increases with increase in strain rates which shows that polymers show a strain dependent behavior. The tensile modulus of the Polyester-ether is higher than Polyester but reaches yield-stress faster than Polyester. This makes Polyester more ductile than Polyester-ether. read less NOT USED (low confidence) J. Li, C. Tian, Y. Zhang, H. Zhou, G. Hu, and R. Xia, “Structure-property relation of nanoporous graphene membranes,” Carbon. 2020. link Times cited: 13 NOT USED (low confidence) M. Li, X. Li, L. Che, F. Li, and Z. Kang, “Non-uniform global-buckling and local-folding in thin film of stretchable electronics,” International Journal of Mechanical Sciences. 2020. link Times cited: 11 NOT USED (low confidence) Y. Wang and L. Huang, “Flexural modes of graphene resonators derived from the reactive empirical bond-order potential,” Physical Review B. 2020. link Times cited: 2 Abstract: Flexural modes play an important role in mechanical, thermal… read moreAbstract: Flexural modes play an important role in mechanical, thermal, and electronic properties of two-dimensional materials. Graphene nanoelectromechanical systems have been found in wide applications and have attracted huge attention recently, where the molecular dynamics (MD) simulation has been an essential route for the investigation of the mechanical responses of the system. In this paper, based on the expressions and parameters of the reactive empirical bond-order potential for the carbon-carbon atomic interactions implemented in Large-scale Atomic/Molecular Massively Parallel Simulator, the linearized part of the force for each atom along the $z$ direction has been obtained, yielding the stiffness matrix of the graphene lattice. By diagonalizing the stiffness matrix, the flexural modes and their corresponding frequencies can be obtained. The results have been validated with MD simulations in circular and square graphene resonators with different sizes. Since the stiffness matrix for graphene resonators with arbitrary shapes can be obtained readily from our results, we expect broad applications where eigenfrequencies and flexural modes are needed in the analysis for the nanoscale resonators. read less NOT USED (low confidence) B. Mortazavi et al., “Efficient machine-learning based interatomic potentialsfor exploring thermal conductivity in two-dimensional materials,” Journal of Physics: Materials. 2020. link Times cited: 39 Abstract: It is well-known that the calculation of thermal conductivit… read moreAbstract: It is well-known that the calculation of thermal conductivity using classical molecular dynamics (MD) simulations strongly depends on the choice of the appropriate interatomic potentials. As proven for the case of graphene, while most of the available interatomic potentials estimate the structural and elastic constants with high accuracy, when employed to predict the lattice thermal conductivity they however lead to a variation of predictions by one order of magnitude. Here we present our results on using machine-learning interatomic potentials (MLIPs) passively fitted to computationally inexpensive ab-initio molecular dynamics trajectories without any tuning or optimizing of hyperparameters. These first-attempt potentials could reproduce the phononic properties of different two-dimensional (2D) materials obtained using density functional theory (DFT) simulations. To illustrate the efficiency of the trained MLIPs, we consider polyaniline C3N nanosheets. C3N monolayer was selected because the classical MD and different first-principles results contradict each other, resulting in a scientific dilemma. It is shown that the predicted thermal conductivity of 418 ± 20 W mK−1 for C3N monolayer by the non-equilibrium MD simulations on the basis of a first-attempt MLIP evidences an improved accuracy when compared with the commonly employed MD models. Moreover, MLIP-based prediction can be considered as a solution to the debated reports in the literature. This study highlights that passively fitted MLIPs can be effectively employed as versatile and efficient tools to obtain accurate estimations of thermal conductivities of complex materials using classical MD simulations. In response to remarkable growth of 2D materials family, the devised modeling methodology could play a fundamental role to predict the thermal conductivity. read less NOT USED (low confidence) W. Zhao and F. Duan, “Friction properties of carbon nanoparticles (nanodiamond and nanoscroll) confined between DLC and a-SiO2 surfaces,” Tribology International. 2020. link Times cited: 21 NOT USED (low confidence) F. Shuang and K. Aifantis, “Relating the strength of graphene/metal composites to the graphene orientation and position,” Scripta Materialia. 2020. link Times cited: 38 NOT USED (low confidence) I. Shepelev, A. Chetverikov, S. Dmitriev, and E. Korznikova, “Shock waves in graphene and boron nitride,” Computational Materials Science. 2020. link Times cited: 30 NOT USED (low confidence) S. N. Jafari, Y. Hakimi, and S. Rouhi, “Molecular dynamics investigation of the mechanical properties of two different graphyne allotropes: α-graphyne and α2-graphyne,” Physica E: Low-dimensional Systems and Nanostructures. 2020. link Times cited: 15 NOT USED (low confidence) J. Han, “The transition from an inverse pseudo Hall-Petch to a pseudo Hall-Petch behavior in nanocrystalline graphene,” Carbon. 2020. link Times cited: 7 NOT USED (low confidence) F. Ojaghnezhad and H. Shodja, “Mechanics of carbon-coated silicon nanowire via second strain gradient theory,” European Journal of Mechanics A-solids. 2020. link Times cited: 6 NOT USED (low confidence) Y. Tsai and C.-L. Kuo, “Effect of Structural Disorders on the Li Storage Capacity of Graphene Nanomaterials: A First-Principles Study.,” ACS applied materials & interfaces. 2020. link Times cited: 5 Abstract: We employed first-principles calculations to investigate the… read moreAbstract: We employed first-principles calculations to investigate the effect of structural disorder on the Li storage capacity of graphene nanomaterials. Our calculations first revealed that the Li storage capacity of graphene monolayer does not necessarily increase with the size of C vacancy created but is largely determined by the local geometry of the defect sites. Our electronic structure analysis further revealed that the enhanced Li storage capacity by the C vacancy defect is mainly attributed to the increased number of unoccupied electronic density of states lying near the Fermi level, which can be substantially increased by raising the number of bond rotations within the vacancy sites. Furthermore, it was also found that the Li storage capacity of graphene can be effectively enhanced by increasing the degree of local ring-disorder without the presence of any vacancy defect. The amorphous graphene structure was shown to possess a relatively higher Li storage capacity as compared to pristine graphene primarily owing to the presence of many non-hexagonal rings randomly distributed in the graphene lattice. These non-hexagonal rings can create many electron-deficient regions on the graphene surface to effectively accommodate more electrons from Li, thereby substantially enhancing the Li storage capacity of graphene nanomaterials. read less NOT USED (low confidence) H. Wang et al., “Frank-van der Merwe Growth in Bilayer Graphene,” Matter. 2020. link Times cited: 23 Abstract: Bilayer graphene has attracted interest for its unique prope… read moreAbstract: Bilayer graphene has attracted interest for its unique properties, including interesting electrical behavior when one layer is slightly rotated relative to the other. However, the quality of large-area bilayer graphene is often limited by the layer-plus-island growth mode in which islands of thicker graphene present as unavoidable impurities. Here, we report the observation of the layer-by-layer, Frank-van der Merwe (FM) growth mode in bilayer graphene where multilayer impurities are suppressed. Instead of the conventional surface adhesive energy, it is found that interface adhesive energy is possible to be tuned with an oxidative pretreatment. The FM-grown bilayer graphene is of AB-stacking or with small-twisting-angle (θ = 0-5°), which is more mechanically robust compared to monolayer graphene, facilitating a free-standing wet transfer technology. read less NOT USED (low confidence) A. Volkov and A. H. Banna, “Mesoscopic computational model of covalent cross-links and mechanisms of load transfer in cross-linked carbon nanotube films with continuous networks of bundles,” Computational Materials Science. 2020. link Times cited: 4 NOT USED (low confidence) B. Faria, C. Guarda, N. Silvestre, and J. Lopes, “CNT-reinforced iron and titanium nanocomposites: Strength and deformation mechanisms,” Composites Part B-engineering. 2020. link Times cited: 23 NOT USED (low confidence) M. Chen, B. Wu, L.-C. Zhou, Y. Zhu, and H. Wu, “Micromechanical properties of pyrolytic carbon with interlayer crosslink,” Carbon. 2020. link Times cited: 15 NOT USED (low confidence) H. A. A. Salihi, M. Fayad, M. Slepchenkov, and V. Shunaev, “Nanoscale oscillator on the base of single-walled carbon nanotube with internal fullerenes C36 and C80,” Saratov Fall Meeting. 2020. link Times cited: 1 Abstract: In this paper we developed the model of GHz- and THz-waves d… read moreAbstract: In this paper we developed the model of GHz- and THz-waves detector on the base of single-walled carbon nanotube functionalized with trimer of fullerene C60 and free fullerenes C36 and C80. It was discovered the amplitude of internal fullerenes’ oscillation depends on temperature and strength of electromagnetic wave. It was found the parameters of incident wave when fullerene C36 and C80 reach wall of carbon nanotube at the distance of 1.7 Å that is not sufficient to form covalent bonds. At such regime fullerenes accept charge from carbon nanotube that leads to change of system’s IV-curve. Discovered phenomena can be the basis for design of nanodetector. read less NOT USED (low confidence) H. Cao and J.-W. Jiang, “Carbon rings as building blocks for single-walled carbon nanotubes,” Nano Futures. 2020. link Times cited: 0 Abstract: Single-walled carbon nanotubes (SWCNTs) are usually synthesi… read moreAbstract: Single-walled carbon nanotubes (SWCNTs) are usually synthesized by the chemical vapor deposition method, in which the resultant SWCNT’s chirality and diameter are sensitive to the catalyst and the experimental conditions. To gain effective control over the geometry of SWCNTs, we propose to grow SWCNTs by stacking carbon rings in a layer-by-layer mode, taking advantage of the high reactivity of carbon rings revealed in the very recent experiment (Kaiser et al 2019 Science 365, 1299–1301). More specifically, we examine possible structures for the stacking of carbon rings along the out-of-plane direction or the linking of carbon rings within the in-plane direction based on the cohesive energy calculation. We illustrate that carbon rings can be used as building blocks to construct SWCNTs of well defined zigzag chirality and with precise diameters predetermined by the size of the carbon ring. By linking carbon rings into the chain configuration, we also find a particular type of chain that can sustain a superhigh tensile strain of 0.68 benefiting from its specific inter-ring configuration. The present work brings a fresh way to grow SWCNTs of well defined geometry and demonstrates possible applications of the recently synthesized carbon rings. read less NOT USED (low confidence) Y. Lin, W. Jiang, Q. Qin, and S.-M. Liao, “A map between excitation magnitude and critical stable temperature for screwing oscillators built on double-walled nanotubes,” Physica E-low-dimensional Systems & Nanostructures. 2020. link Times cited: 4 NOT USED (low confidence) H. N. Pishkenari and A. Golzari, “A temperature-calibrated continuum model for vibrational analysis of the fullerene family using molecular dynamics simulations,” Applied Mathematical Modelling. 2020. link Times cited: 5 NOT USED (low confidence) C. Androulidakis, E. Koukaras, G. Paterakis, G. Trakakis, and C. Galiotis, “Tunable macroscale structural superlubricity in two-layer graphene via strain engineering,” Nature Communications. 2020. link Times cited: 71 NOT USED (low confidence) C. M. Miliante et al., “Unveiling the Origin of the Giant Barocaloric Effect in Natural Rubber,” Macromolecules. 2020. link Times cited: 15 Abstract: The barocaloric effect (BCE) is characterized as thermal res… read moreAbstract: The barocaloric effect (BCE) is characterized as thermal responses (variations of temperature or entropy) in a material resulting from compression. Several materials exhibit a BCE suitable for deve... read less NOT USED (low confidence) H. Li and W. K. Kim, “A comparison study between the Lennard-Jones and DRIP potentials for friction of graphene layers,” Computational Materials Science. 2020. link Times cited: 4 NOT USED (low confidence) F. Zhu, Z. Guo, and T. Chang, “Nanoscale continuous cyclic motion driven by a stable thermal field,” Applied Materials Today. 2020. link Times cited: 8 NOT USED (low confidence) R. Ishraaq, S. Nahid, S. Chhetri, O. Gautam, and A. Afsar, “A molecular dynamics investigation for predicting the optimum fiber radius and the effect of various parameters on the mechanical properties of carbon nanotube reinforced iron composite,” Computational Materials Science. 2020. link Times cited: 6 NOT USED (low confidence) F. Arca, J. P. Mendez, M. Ortiz, and M. P. Ariza, “Spontaneous twinning as an accommodation mechanism in monolayer graphene,” European Journal of Mechanics A-solids. 2020. link Times cited: 4 NOT USED (low confidence) S. Dong, Y. Xia, R. Huang, and J. Zhao, “Modulating mechanical anisotropy of two-dimensional materials by controlling their defects,” Carbon. 2020. link Times cited: 10 NOT USED (low confidence) B. Faria, N. Silvestre, C. E. S. Bernardes, and J. Lopes, “Towards the development of nanosprings from confined carbyne chains,” Physica E-low-dimensional Systems & Nanostructures. 2020. link Times cited: 7 NOT USED (low confidence) Y. Wang and C. Wang, “Self-assembly of graphene sheets actuated by surface topological defects: Toward the fabrication of novel nanostructures and drug delivery devices,” Applied Surface Science. 2020. link Times cited: 8 NOT USED (low confidence) S. Mukherjee, R. Alicandri, and C. V. Singh, “Strength of graphene with curvilinear grain boundaries,” Carbon. 2020. link Times cited: 10 NOT USED (low confidence) J. Chen, B. Liu, and X. Gao, “Thermal properties of graphene-based polymer composite materials: A molecular dynamics study,” Results in physics. 2020. link Times cited: 22 NOT USED (low confidence) M. Slepchenkov and D. S. Shmygin, “Electron-energy properties of pillared graphene modified with potassium,” BiOS. 2020. link Times cited: 0 Abstract: This work is devoted to solving the problem of reducing the … read moreAbstract: This work is devoted to solving the problem of reducing the work function of a pillared graphene structures. A computational experiment was performed. The purpose was to study various structures of pillared graphene, the cavities of which are filled with potassium. The stability of structures was estimated from the energy of formation, the work function – from the Fermi energy. It was found, that work function decreases with an increase of potassium mass fraction – decrease by 1 eV was reached at 10% mass fraction of potassium and decreasing by 2-2.6 eV has been established at the maximal mass fraction of potassium. read less NOT USED (low confidence) Z. Dou et al., “Molecular dynamics simulation of bimodal atomic force microscopy.,” Ultramicroscopy. 2020. link Times cited: 5 NOT USED (low confidence) P. Restuccia, M. Ferrario, and M. Righi, “Quantum Mechanics/Molecular Mechanics (QM/MM) applied to tribology: Real-time monitoring of tribochemical reactions of water at graphene edges,” Computational Materials Science. 2020. link Times cited: 11 NOT USED (low confidence) R. Fang, W. Wang, L. Guo, K. Zhang, X. Zhang, and H. Li, “Atomic insight into the solidification of Cu melt confined in graphene nanoslits,” Journal of Crystal Growth. 2020. link Times cited: 10 NOT USED (low confidence) Z. Zhao, Z. Zhang, and W. Guo, “A family of all sp2-bonded carbon allotropes of topological semimetals with strain-robust nodal-lines,” Journal of Materials Chemistry C. 2020. link Times cited: 14 Abstract: We report on a family of all-sp2 carbon allotropes construct… read moreAbstract: We report on a family of all-sp2 carbon allotropes constructed by interconnected screw dislocations with complementary chiralities through atomistic calculations. The carbon allotropes have lattice periodicities defined by the interspacing among screw dislocations and are shown to withstand an elastic stretch of over 90% along the direction of the dislocation axis. A subset of these allotropes exhibit interesting unclosed, topological nodal-lines near the Fermi level, while the other subset with a higher symmetry are topological semimetals with a nodal-loop at the Fermi level. Moreover, the topological semimetallicity in these allotropes is robust to an elastic stretch of up to 75% due to their unique symmetry, in contrast to a common view that a tensile strain tunes a topological material into a trivial semiconductor. Of relevance is that these allotropes are notably more stable than most of previously reported allotropes and likely to exist in specimens of detonation soot according to simulated X-ray diffraction patterns, suggesting the possibility of their experimental realizations. Our strategy for constructing functional 3D materials based on Riemann surfaces is by no means limited to carbon but applicable to other chemical elements and blends, notably P, B, BN and MoS2. read less NOT USED (low confidence) F. Rahmani, S. Nouranian, and Y. Chiew, “3D Graphene as an Unconventional Support Material for Ionic Liquid Membranes: Computational Insights into Gas Separations,” Industrial & Engineering Chemistry Research. 2020. link Times cited: 9 Abstract: Three-dimensional graphene (3DGr) is explored as an unconven… read moreAbstract: Three-dimensional graphene (3DGr) is explored as an unconventional support material for supported ionic liquid membranes (SILMs) in gas separations. Herein, molecular dynamics/grand canonical Monte... read less NOT USED (low confidence) A. Vashisth, M. Kowalik, J. Gerringer, C. M. Ashraf, A. V. van Duin, and M. J. Green, “ReaxFF Simulations of Laser-Induced Graphene (LIG) Formation for Multifunctional Polymer Nanocomposites.” 2020. link Times cited: 64 Abstract: Irradiation of polymer films by a CO2 infrared laser under a… read moreAbstract: Irradiation of polymer films by a CO2 infrared laser under ambient conditions converts the polymer into porous graphene or laser-induced graphene (LIG). Here, we simulate the formation of LIG from ... read less NOT USED (low confidence) S. Chowdhury, S. Sockalingam, and J. R. J. GILLESPIE, “Inter-molecular interactions in ultrahigh molecular weight polyethylene single crystals,” Computational Materials Science. 2020. link Times cited: 2 NOT USED (low confidence) A. Rege and S. P. Patil, “On the Molecular to Continuum Modeling of Fiber‐Reinforced Composites,” Advanced Theory and Simulations. 2020. link Times cited: 5 Abstract: A multiscale approach to model fiber‐reinforced composites, … read moreAbstract: A multiscale approach to model fiber‐reinforced composites, those that are characterized by an isotropic orientation of fibers, is presented. To this end, a bottom‐up approach is used to formulate a hierarchical model. The primary basis for the mesoscopic description revolves around the assumption that the composite network consists of fibers resting on foundations of the native material matrix. Molecular dynamics (MD) simulations of such fibers on foundations are performed, and crucial material parameters, such as the stiffness of the particle matrix and Young's modulus of the fibers are evaluated. Subsequently, a micro‐mechanical constitutive model is formulated, wherein fiber‐reinforced composites are characterized by a homogeneous distribution and an isotropic orientation of fibers. The fibers are modeled as beams undergoing bending and stretching while resting on Winkler‐type of elastic foundations. The 3D macroscopic network behavior is finally presented. As an example, the particle matrix used is a silica aerogel and the fibers are modeled as double‐walled carbon nanotubes. In the proposed modeling approach, MD simulations are shown to provide a physical estimation of the micro‐mechanical model parameters. read less NOT USED (low confidence) X. Lv, C. Guan, Z. Han, and C. Chen, “Interfacial wetting mechanisms of Al liquid on cathode carbon blocks of aluminum reduction cell for developing wettable cathode materials,” Journal of Molecular Liquids. 2020. link Times cited: 9 NOT USED (low confidence) A. I. Klyavlina, L. Rysaeva, and R. Murzaev, “Dislocation dipole in graphene at finite temperatures,” Journal of Physics: Conference Series. 2020. link Times cited: 2 Abstract: In the present work, the evolution of defect structure of gr… read moreAbstract: In the present work, the evolution of defect structure of graphene with dislocation dipole of three types in thermal equilibrium is studied by molecular dynamics simulations. The presence of defects can considerably reduce the temperature at which graphene remains stable in thermal equilibrium. It is found, that at elevated temperatures, there is a movement of dislocations in a dipole with arm equal to 7 Å, so that a new dipole with the arm 3 Åis formed with the further transformation to the Stone-Wales defect. This reveals that dipole arm is less than annihilation distance for dislocation dipole. Again, the Stone–Wales defect at elevated temperatures disappears as a result of the rotation of the C–C bond. The obtained results will allow describing the dynamics of defects in graphene in thermal equilibrium, which can be helpful to analytically describe dislocation dynamics in graphene. read less NOT USED (low confidence) W. Fan and J. Chen, “Two-state diffusive mobility of slow and fast transport of water in narrow nanochannels.,” Physical review. E. 2020. link Times cited: 4 Abstract: Transport of water in narrow nanochannels as a single-file c… read moreAbstract: Transport of water in narrow nanochannels as a single-file chain is involved in various biological activities and nanofluidic applications. However, although the consistent dipole orientation of the water molecules is intensively studied, its effect upon the transport behavior is still unknown. In this Rapid Communication, we find two states of slow and fast transport coexist in the single-file water in the presence of channel defects that break the collective dipole orientation. A low diffusive mobility is found for the dipole orientation inconsistent configurations while mobility approximately two times higher is found for the consistent ones. The two-state diffusion process relies on the different hydrogen bond connections, which possess overlapped structures, enabling a spontaneous transition. The slow state is insensitive to the increased defect number while the fast state is reduced accordingly. The two states exhibit different lifetime and temperature dependences that demonstrate a possibility for manipulation. Our result implies the possibility of two-state diffusion process of water in nanofluid phenomena due to the common presence of defects in nanochannels. read less NOT USED (low confidence) D. Liu, “Investigation on thermal conductivity of graphene/Si heterostructure with different defect ratios and sizes,” Physics Letters A. 2020. link Times cited: 5 NOT USED (low confidence) J. Leng, Y. Hu, and T. Chang, “Nanoscale directional motion by angustotaxis.,” Nanoscale. 2019. link Times cited: 5 Abstract: Directing motion of a nanoscale object on solid surfaces, in… read moreAbstract: Directing motion of a nanoscale object on solid surfaces, in particular in an intrinsic way, is crucial for many aspects of nanotechnology applications. Here we report a novel intrinsic mechanism for nanoscale directional motion, termed angustotaxis, where a wide single walled carbon nanotube in a tapered channel drives itself toward the narrower end of the channel. The underlying physics of angustotaxis is attributed to the lower system potential when the nanotube is at a narrower region of the channel due to the increased contact area between the nanotube and the channel. Angustotaxis could lead to promising routes not only for nanoscale energy conversion from van der Waals potential to mechanical work, but also for mass transport like surface cleaning. read less NOT USED (low confidence) D. Nakar et al., “Few-Wall Carbon Nanotube Coils.,” Nano letters. 2019. link Times cited: 11 Abstract: While various electronic components based on carbon nanotube… read moreAbstract: While various electronic components based on carbon nanotubes (CNTs) have already been demonstrated, the realization of miniature electromagnetic coils based on CNTs remains a challenge. Coils made of single-wall CNTs with accessible ends for contacting have been recently demonstrated, but were found unsuitable to act as electromagnetic coils due to electrical shorting between their turns. Coils made of a few-wall CNT could in principle allow an insulated flow of current, and thus be potential candidates for realizing CNT-based electromagnetic coils. However, no such CNT structure has been produced so far. Here, we demonstrate the formation of few-wall CNT coils and characterize their structural, optical, vibrational, and electrical properties using experimental and computational tools. The coils are made of CNTs with 2, 3, or 4 walls. They have accessible ends for electrical contacts and low defect densities. The coil diameters are on the order of one micron, like those of single-wall CNT coils, despite the higher rigidity of few-wall CNTs. Coils with as many as 163 turns were found, with their turns organized in a rippled raft configuration. These coils are promising candidates for a variety of miniature devices based on electromagnetic coils, such as electromagnets, inductors, transformers, and motors. Being chirally and enantiomerically pure few-wall CNT bundles, they are also ideal for fundamental studies of inter-wall coupling and superconductivity in CNTs. read less NOT USED (low confidence) X. Wu and Q. Han, “Directional Gradientless Thermoexcited Rotating System Based on Carbon Nanotubes and Graphene,” Journal of Nanomaterials. 2019. link Times cited: 3 Abstract: The simple and practicable intrinsic driving mechanism is of… read moreAbstract: The simple and practicable intrinsic driving mechanism is of great significance for the design and development of nanoscale devices. This paper proposes a nanosystem that can achieve directional gradientless thermoexcited rotation at a relatively high temperature field (such as 300 K). In the case of a constant temperature field, the difference in atomic van der Waals (VDW) potentials in different regions of the rotor can be achieved by an asymmetric design of the structure, which provides torque for the rotation of the rotor. We studied the rotation and driving mechanism of the designed system through molecular dynamics (MD) simulation and discussed the influence of the chiral combination of carbon nanotubes, the chirality of graphene substrate, the length of graphene substrate, and the system temperature on rotation. At the same time, this paper also makes a qualitative analysis of the feasibility of the designed system from the perspective of molecular mechanics combined with energy. This research provides a new idea of nanoscale driving rotation, which has guiding significance for the design and application of related nanodevices in the future. read less NOT USED (low confidence) B. Zheng and G. X. Gu, “Tuning the graphene mechanical anisotropy via defect engineering,” Carbon. 2019. link Times cited: 35 NOT USED (low confidence) S. Lin, Z. Cai, Y. Wang, L. Zhao, and C. Zhai, “Tailored morphology and highly enhanced phonon transport in polymer fibers: a multiscale computational framework,” npj Computational Materials. 2019. link Times cited: 21 NOT USED (low confidence) C. de Tomas et al., “Transferability in interatomic potentials for carbon,” Carbon. 2019. link Times cited: 48 NOT USED (low confidence) Q. Liu, J. Huang, and B. Xu, “Evaporation-driven crumpling and assembling of two-dimensional (2D) materials: A rotational spring – mechanical slider model,” Journal of The Mechanics and Physics of Solids. 2019. link Times cited: 22 NOT USED (low confidence) N. Wei, S. Li, Y. Zhang, J. Chen, Y. Chen, and J. Zhao, “Thermal rectification of graphene on substrates with inhomogeneous stiffness,” Carbon. 2019. link Times cited: 17 NOT USED (low confidence) M. Dewapriya and S. Meguid, “Comprehensive molecular dynamics studies of the ballistic resistance of multilayer graphene-polymer composite,” Computational Materials Science. 2019. link Times cited: 29 NOT USED (low confidence) C. Sun, X. Zheng, and B. Bai, “Hydrogen purification using nanoporous graphene membranes and its economic analysis,” Chemical Engineering Science. 2019. link Times cited: 16 NOT USED (low confidence) A. Wei, S. Lahkar, X. Li, S.-Y. Li, and H. Ye, “Multilayer Graphene-Based Thermal Rectifier with Interlayer Gradient Functionalization.,” ACS applied materials & interfaces. 2019. link Times cited: 15 Abstract: As a counterpart of electrical and optical diodes with asymm… read moreAbstract: As a counterpart of electrical and optical diodes with asymmetric transmission properties, the nanoscale thermal rectifier has attracted huge attention. Graphene has been expected as the most promising candidate for the design and fabrication of high-performance thermal rectifiers. However, most reported graphene-based thermal rectification has been achieved only within the plane of the graphene layer, and the efficiency is heavily limited by the lateral size, restricting the potential applications. In this paper, we propose a design of multilayer graphene-based thermal rectifier (MGTR) with interlayer gradient functionalization. A unique thermal rectification along the vertical direction without lateral size limitation is demonstrated by molecular dynamics simulations. The heat flux prefers to transport from a fully hydrogenated graphene layer to a pristine graphene layer. The analysis of phonon density of states reveals that the mismatch between dominant frequency domains plays a crucial role in the vertical thermal rectification phenomenon. The impacts of temperature and strain on the rectification efficiency are systematically investigated, and we verify the interlayer welding process as an effective approach to eliminate the degradation induced by out-of-plane compression. In addition, compared with uniform hydrogenation at average H-coverage, an anomalous enhancement of in-plane thermal conductivity of multilayer graphene with interlayer gradient hydrogenation is observed. The proposed MGTR has great potential in designing devices for heat management and logic control. read less NOT USED (low confidence) B. Rennekamp, F. Kutzki, A. Obarska-Kosińska, C. Zapp, and F. Gräter, “Hybrid Kinetic Monte Carlo / Molecular Dynamics Simulations of Bond Scissions in Proteins.,” Journal of chemical theory and computation. 2019. link Times cited: 6 Abstract: Proteins are exposed to various mechanical loads that can le… read moreAbstract: Proteins are exposed to various mechanical loads that can lead to covalent bond scissions even before macroscopic failure occurs. Knowledge of these molecular breakages is important to understand mechanical properties of the protein. In regular Molecular Dynamics (MD) simulations covalent bonds are predefined and reactions cannot occur. Existing approaches that tackle this limitation either rely on computationally expensive quantum calculations (e.g. QM/MM) or complex bond order formalism in force fields (e.g. ReaxFF). To circumvent these limitations, we present a new reactive Kinetic Monte Carlo / Molecular Dynamics (KIMMDY) scheme. Here, bond rupture rates are calculated based on the interatomic distances in the MD simulation and then used as an input for a Kinetic Monte Carlo step. This easily scalable hybrid approach drastically increases the accessible timescales. Using this new technique, we investigate bond ruptures in a multi-million atom system of tensed collagen, a structural protein found in skin, bones and tendons. We show a clear concentration of bond scissions near chemical crosslinks in collagen. We also examine subsequent dynamic relaxation steps. Our method exhibits only a minor slowdown compared to classical MD and is straightforwardly applicable to other complex (bio)materials under load and related chemistries. read less NOT USED (low confidence) C. Ye et al., “Design and Fabrication of Silk Templated Electronic Yarns and Applications in Multifunctional Textiles,” Matter. 2019. link Times cited: 79 NOT USED (low confidence) B. Deng, R. Xu, X. Wang, L.-cong An, K. Zhao, and G. Cheng, “Roll to roll manufacturing of fast charging, mechanically robust 0D/2D nanolayered Si-graphene anode with well-interfaced and defect engineered structures,” Energy Storage Materials. 2019. link Times cited: 25 NOT USED (low confidence) S. Haghighi, R. Ansari, and S. Ajori, “Interfacial properties of 3D metallic carbon nanostructures (T6 and T14)-reinforced polymer nanocomposites: A molecular dynamics study.,” Journal of molecular graphics & modelling. 2019. link Times cited: 12 NOT USED (low confidence) H. Li and P. S. Branicio, “Ultra-low friction of graphene/C60/graphene coatings for realistic rough surfaces,” Carbon. 2019. link Times cited: 13 NOT USED (low confidence) Z. Zheng, H. Zhan, Y. Nie, X. Xu, and Y. T. Gu, “Role of Nitrogen on the Mechanical Properties of the Novel Carbon Nitride Nanothreads,” The Journal of Physical Chemistry C. 2019. link Times cited: 7 Abstract: Carbon nanothread (C-NTH) is a new ultrathin one-dimensional… read moreAbstract: Carbon nanothread (C-NTH) is a new ultrathin one-dimensional sp3 carbon nanostructure, which exhibits promising applications in novel carbon nanofibers and nanocomposites. Recently, researchers have successfully developed a new alternative structure - ultrathin carbon nitride nanothread (CN-NTH). In this work, we investigate the mechanical properties of CN-NTHs through large-scale molecular dynamics simulations. Comparing with their C-NTH counterparts, CN-NTHs are found to exhibit a higher tensile and bending stiffness. In particular, because of the bond redistribution, the CN-NTHs in the polymer I group and tube (3,0) group are found to possess a higher failure strain than their C-NTH counterparts. However, the CN-NTH in the polytwistane group has a smaller failure strain compared with the pristine C-NTH. According to the atomic configurations, the presence of nitrogen atoms always leads to stress/strain concentrations for the nanothreads under tensile deformation. This study provides a comprehensive understanding of the mechanical properties of CN-NTHs, which should shed light on their potential applications such as fibers or reinforcements for nanocomposites. read less NOT USED (low confidence) A. Nemati, H. N. Pishkenari, A. Meghdari, and S. Ge, “Controlling the Diffusive Motion of Fullerene-Wheeled Nanocars Utilizing a Hybrid Substrate,” The Journal of Physical Chemistry C. 2019. link Times cited: 14 Abstract: In the previous years, a few types of nanocars have been bui… read moreAbstract: In the previous years, a few types of nanocars have been built with the promising potential to transport other molecules, to provide bottom-up assembly, or to perform other mechanical tasks. In this study, we propose a method to convert the diffusive displacement of nanocars to a guided motion in a desired path by adding some impurity atoms in the substrate. We investigated the motion of C60 as well as the nanotruck and the nanocar on a flat gold substrate containing silver contamination and conversely a silver substrate containing gold contamination at the different temperatures. The results showed that silver impurity on the gold substrate act as a repellent obstacle in the path of C60 making it unable to enter the silver region even at high temperatures, although at 600 K and higher temperatures, it was finally able to enter the silver segment. Nevertheless, a big enough silver impurity proved to be an impenetrable barrier for the nanocar and the nanotruck even at 600 K. The study of motion on the silv... read less NOT USED (low confidence) J. Zhang, “Cycloparaphenylene crystals: Packed carbon nanorings for energy absorption and thermal insulation,” Computational Materials Science. 2019. link Times cited: 6 NOT USED (low confidence) N. A. Mehta and D. Levin, “Multiscale modeling of damaged surface topology in a hypersonic boundary.,” The Journal of chemical physics. 2019. link Times cited: 7 Abstract: In this work, we used molecular dynamics (MD) to perform tra… read moreAbstract: In this work, we used molecular dynamics (MD) to perform trajectory simulations of ice-like argon and amorphous silica aggregates on atomically smooth highly ordered pyrolytic graphite (HOPG) and a comparatively rougher quartz surface. It was found that at all incidence velocities, the quartz surface was stickier than the HOPG surface. The sticking probabilities and elastic moduli obtained from MD were then used to model surface evolution at a micron length scale using kinetic Monte Carlo (kMC) simulations. Rules were derived to control the number of sites available for the process execution in kMC to accurately model erosion of HOPG by atomic oxygen (AO) attack and ice-nucleation on surfaces. It was observed that the effect of defects was to increase the material erosion rate, while that of aggregate nucleation was to lower it. Similarly, simulations were performed to study the effects of AO attack and N2 adsorption-desorption on surface evolution and it was found that N2 adsorption-desorption limits the surface available for erosion by AO attack. read less NOT USED (low confidence) X. Shi and X. He, “Influence of Defects on the Mechanical Performances of Super Carbon Nanotube,” IOP Conference Series: Materials Science and Engineering. 2019. link Times cited: 0 Abstract: Although nanotechnology processes greatly in recent years, d… read moreAbstract: Although nanotechnology processes greatly in recent years, defects are still unavoidable in the production of CNTs and relevant structures, which remarkably reduce their theoretical high-performance. In this study, the influence of defects on the mechanical and fracture performances of SCNT, a CNT-based honeycomb structure, are investigated via molecular dynamics simulations. Defects are revealed to reduce the bearing capacities of SCNTs and the reducing degree significantly relies on both the defect position and the SCNT structure. Defects also modify the cracking path of SCNTs and slow down the fracture propagation, especially for zigzag SCNT. Essentially, defects bring force concentration near the defective area, resulting in the local early fracture. Yet the force concentration degrees of the armchair and zigzag SCNTs are affected by different mechanisms. The force concentration degree of armchair SCNT is displacement-controlled, but that of zigzag SCNT is determined by the force redistribution. The underlying reason for controlling the influence of defect is found to be the force transfer mode of the armchair and zigzag SCNT. With the fact that defects widely exit in the CNT-based networks, this investigation could provide valuable information for the practical applications of CNT-based structures. read less NOT USED (low confidence) R. Sun, L. Li, C. Feng, S. Kitipornchai, and J. Yang, “Tensile property enhancement of defective graphene/epoxy nanocomposite by hydrogen functionalization,” Composite Structures. 2019. link Times cited: 43 NOT USED (low confidence) R. Li, B. Liu, and F. Gao, “Molecular dynamics study of the material property changes induced by accumulated point defects in graphite,” Nuclear Instruments and Methods in Physics Research Section B: Beam Interactions with Materials and Atoms. 2019. link Times cited: 3 NOT USED (low confidence) Z. Zhao, Y. Hang, Z.-xia Zhang, and W. Guo, “Topological hybrid nodal-loop semimetal in a carbon allotrope constructed by interconnected Riemann surfaces,” Physical Review B. 2019. link Times cited: 15 NOT USED (low confidence) G. Wang et al., “Bending of Multilayer van der Waals Materials.,” Physical review letters. 2019. link Times cited: 98 Abstract: Out-of-plane deformation patterns, such as buckling, wrinkli… read moreAbstract: Out-of-plane deformation patterns, such as buckling, wrinkling, scrolling, and folding, formed by multilayer van der Waals materials have recently seen a surge of interest. One crucial parameter governing these deformations is bending rigidity, on which significant controversy still exists despite extensive research for more than a decade. Here, we report direct measurements of bending rigidity of multilayer graphene, molybdenum disulfide (MoS_{2}), and hexagonal boron nitride (hBN) based on pressurized bubbles. By controlling the sample thickness and bubbling deflection, we observe platelike responses of the multilayers and extract both their Young's modulus and bending rigidity following a nonlinear plate theory. The measured Young's moduli show good agreement with those reported in the literature (E_{graphene}>E_{hBN}>E_{MoS_{2}}), but the bending rigidity follows an opposite trend, D_{graphene}read less NOT USED (low confidence) Z. Milne, J. Schall, T. Jacobs, J. A. Harrison, and R. Carpick, “Covalent Bonding and Atomic-Level Plasticity Increase Adhesion in Silicon-Diamond Nanocontacts.,” ACS applied materials & interfaces. 2019. link Times cited: 17 Abstract: Nanoindentation and sliding experiments using single-crystal… read moreAbstract: Nanoindentation and sliding experiments using single-crystal silicon atomic force microscope probes in contact with diamond substrates in vacuum were carried out in situ with a transmission electron microscope (TEM). After sliding, the experimentally-measured works of adhesion were significantly larger than values estimated for pure van der Waals (vdW) interactions. Furthermore, the works of adhesion increased with both the normal stress and speed during the sliding, indicating that applied stress played a central role in the reactivity of the interface. Complementary molecular dynamics (MD) simulations were used to lend insight into the atomic-level processes that occur during these experiments. Simulations using crystalline silicon tips with varying degrees of roughness and diamond substrates with different amounts of hydrogen termination demonstrated two relevant phenomena. First, covalent bonds formed across the interface, where the number of bonds formed was affected by the hydrogen termination of the substrate, the tip roughness tip, the applied stress, and the stochastic nature of bond formation. Second, for initially rough tips, the sliding motion and the associated application of shear stress produced an increase in irreversible atomic-scale plasticity that tended to smoothen the tips' surfaces, which resulted in a concomitant increase in adhesion. In contrast, for initially smooth tips, sliding roughening some of these tips. In the limit of low applied stress, the experimentally-determined works of adhesion match the intrinsic (van der Waals) work of adhesion for an atomically-smooth silicon-diamond interface obtained from MD simulations. The results provide mechanistic interpretations of sliding-induced changes in interfacial adhesion and may help inform applications involving adhesive interfaces that are subject to applied shear forces and displacements. read less NOT USED (low confidence) K. Wang, C. Qu, J. Wang, W. Ouyang, M. Ma, and Q. Zheng, “Strain Engineering Modulates Graphene Interlayer Friction by Moiré Patterns Evolution.,” ACS applied materials & interfaces. 2019. link Times cited: 46 Abstract: The sliding friction of a graphene flake atop strained graph… read moreAbstract: The sliding friction of a graphene flake atop strained graphene substrates is studied using molecular dynamics simulation. We demonstrate that in this superlubric system friction can be reduced non-monotonically by applying strain, which differs from previously reported results on various 2D materials. The critical strain needed for significant reduction in friction decreases drastically when flake size increases. For a 250 nm flake, a 0.1% biaxial strain could lead to a more than 2-order-of-magnitude reduction. The underlying mechanism is revealed to be the evolution of Moiré patterns. The area of the Moiré pattern relative to the flake size plays a central role in determining friction in strain engineering and other scenarios of superlubricity as well. This result suggests that strain engineering could be particularly efficient for friction modification with large contacts. read less NOT USED (low confidence) A. Mohammed, H. Sehitoglu, and R. Rateick, “Interface graphitization of carbon-carbon composites by nanoindentation,” Carbon. 2019. link Times cited: 15 NOT USED (low confidence) Y. Ma, G. Wang, Y. Chen, L. Liu, and Z. Zhang, “A Mock Gas Molecules Model for Accurately Simulating Pressure Load at Micro- and Nanoscales,” Journal of Applied Mechanics. 2019. link Times cited: 2 Abstract: At micro- and nanoscales, the gas pressure load is generally… read moreAbstract: At micro- and nanoscales, the gas pressure load is generally simulated by the thermal motion of gas molecules. However, the pressure load can hardly be produced or controlled accurately, because the effects of the wall thickness and the atomic weight of the gas molecules are not taken into account. In this paper, we propose a universal gas molecules model for simulating the pressure load accurately at micro- and nanoscales, named mock gas molecules model. Six scale-independent parameters are established in this model, thus the model is applicable at both micro- and nanoscales. To present the validity and accuracy of the model, the proposed model is applied into the coarse-grained molecular dynamics simulation of graphene blister, and the simulation results agree well with experimental observations from the graphene blister test, indicating that the model can produce and control the pressure load accurately. Furthermore, the model can be easily implemented into many simulators for problems about the solid–gas interaction, especially for membrane gas systems. read less NOT USED (low confidence) C. U. Gonzalez-Valle, L. E. Paniagua-Guerra, and B. Ramos-Alvarado, “Implications of the Interface Modeling Approach on the Heat Transfer across Graphite–Water Interfaces,” The Journal of Physical Chemistry C. 2019. link Times cited: 17 Abstract: In this investigation, the thermal transport across graphite… read moreAbstract: In this investigation, the thermal transport across graphite–water interfaces was studied by means of nonequilibrium classical molecular dynamics (NEMD) simulations. The main focus of this work was the assessment of the interface modeling approach of the nonbonded interactions, where empirical models optimized for predicting an experimental wetting condition were compared against interface models derived from multibody electronic structure methods. To understand the mechanisms involved in the interfacial heat transfer, spectral heat flux mapping and phonon dynamics (spectral energy density) analyses were implemented to query the vibrational composition of interfacial heat transfer. Aside from the NEMD formulation, a modified acoustic mismatch model including interfacial interactions was utilized. The results obtained from this investigation are twofold. (i) The minimum of the adsorption energy curve (binding energy) can be used to fully describe the wetting response of an atomically dense surface, such as... read less NOT USED (low confidence) M. R. Vazirisereshk, S. A. Sumaiya, A. Martini, and M. Baykara, “Measurement of electrical contact resistance at nanoscale gold-graphite interfaces,” Applied Physics Letters. 2019. link Times cited: 8 Abstract: An approach to measuring electrical contact resistance as a … read moreAbstract: An approach to measuring electrical contact resistance as a direct function of the true contact size at the nanoscale is presented. The approach involves conductive atomic force microscopy (C-AFM) measurements performed on a sample system comprising atomically flat interfaces (up to several hundreds of nanometers in lateral size) formed between gold islands and a highly oriented pyrolytic graphite (HOPG) substrate. The method overcomes issues associated with traditional C-AFM such that conduction can be correlated with a measurable true, conductive contact area. Proof-of-principle experiments performed on gold islands of varying size point toward an increasing contribution of the island-HOPG junction to the measured total resistance with decreasing island size. Atomistic simulations complement and elucidate experimental results, revealing the maximum island size below which the electrical contact resistance at the island-HOPG junction can be feasibly extracted from the measured total resistance. read less NOT USED (low confidence) P. Z. Hanakata, E. D. Cubuk, D. Campbell, and H. S. Park, “Erratum: Accelerated Search and Design of Stretchable Graphene Kirigami Using Machine Learning [Phys. Rev. Lett. 121, 255304 (2018)].,” Physical review letters. 2019. link Times cited: 2 Abstract: This corrects the article DOI: 10.1103/PhysRevLett.121.25530… read moreAbstract: This corrects the article DOI: 10.1103/PhysRevLett.121.255304. read less NOT USED (low confidence) K. Sharma, K. K. Kammara, and R. Kumar, “Study of mechanical response of CNT-polyethylene nanocomposite using molecular dynamics approach,” 31ST INTERNATIONAL SYMPOSIUM ON RAREFIED GAS DYNAMICS: RGD31. 2019. link Times cited: 1 Abstract: This study aims to gain an understanding of the mechanical r… read moreAbstract: This study aims to gain an understanding of the mechanical response of nanocomposite systems at a molecular level and uses a carbon nanotube (CNT) and polyethylene (PE) nanocomposite as its example. The CNT and PE systems are modeled using molecular dynamics (MD) method and validated for small strain values. Tensile loading behavior of the nanocomposite is documented at various CNT mass fractions. The Young’s moduli of the several CNT mass fraction samples are evaluated at 2% to 4% strain and compared among them. The results from the nanocomposites, as compared to the mixing rule predictions, show a negligible gain in the tensile strength while reducing the ultimate strength of the nanocomposite.This study aims to gain an understanding of the mechanical response of nanocomposite systems at a molecular level and uses a carbon nanotube (CNT) and polyethylene (PE) nanocomposite as its example. The CNT and PE systems are modeled using molecular dynamics (MD) method and validated for small strain values. Tensile loading behavior of the nanocomposite is documented at various CNT mass fractions. The Young’s moduli of the several CNT mass fraction samples are evaluated at 2% to 4% strain and compared among them. The results from the nanocomposites, as compared to the mixing rule predictions, show a negligible gain in the tensile strength while reducing the ultimate strength of the nanocomposite. read less NOT USED (low confidence) B. Mcguigan, H. Johnson, and P. Pochet, “Coupling point defects and potential energy surface exploration,” Computational Materials Science. 2019. link Times cited: 1 NOT USED (low confidence) L. Rysaeva, J. Baimova, S. Dmitriev, D. Lisovenko, V. Gorodtsov, and A. Rudskoy, “Elastic properties of diamond-like phases based on carbon nanotubes,” Diamond and Related Materials. 2019. link Times cited: 23 NOT USED (low confidence) K. Xia, H. Zhan, A. Ji, J. Shao, Y. T. Gu, and Z. Li, “Graphynes: an alternative lightweight solution for shock protection,” Beilstein Journal of Nanotechnology. 2019. link Times cited: 6 Abstract: The excellent mechanical properties of graphyne (GY) have ma… read moreAbstract: The excellent mechanical properties of graphyne (GY) have made it an appealing candidate in the field of impact protection. We assessed the deformation mechanisms of monolayer GY nanosheets of different morphologies, including α-GY, β-GY, γ-GY and 6612-GY, under supersonic-velocity impacts (from 1 to 6 km/s) based on in silico studies. Generally, cracks initiate at the geometry center and the nanosheet experiences significant out-of-plane deformation before the propagation of cracks. Tracking the atomic von Mises stress distribution, it is found that its cumulative density function has a strong correlation with the magnitude of the Young’s modulus of the GYs. For nanosheets with a higher Young’s modulus, it tends to transfer momentum at a faster rate. Thus, a better energy dissipation or delocalization is expected during impact. This study provides a fundamental understanding of the deformation and penetration mechanisms of monolayer GY nanosheets under impact, which is crucial in order to facilitate their emerging applications for impact protection. read less NOT USED (low confidence) R. R. Santhapuram, S. E. Muller, and A. Nair, “Nanoscale bending properties of bio-inspired Ni-graphene nanocomposites,” Composite Structures. 2019. link Times cited: 21 NOT USED (low confidence) R. Sun, L. Li, S. Zhao, C. Feng, S. Kitipornchai, and J. Yang, “Temperature-dependent mechanical properties of defective graphene reinforced polymer nanocomposite,” Mechanics of Advanced Materials and Structures. 2019. link Times cited: 17 Abstract: This article presents an atomistic study on the mechanical b… read moreAbstract: This article presents an atomistic study on the mechanical behaviors of polymer nanocomposite reinforced with defective graphene using molecular dynamics simulations, with a particular focus on the influences of temperature change and atom vacancy defect. Numerical results show that the tensile and compressive properties of the nanocomposite behave differently as temperature changes and are more significantly affected by defect type, size, and location at high temperatures. The Halpin–Tsai model is then modified based on the present results to enable the effects of temperature and graphene defects to be taken into account in determining the Young’s modulus of graphene-reinforced nanocomposites read less NOT USED (low confidence) S. Thamaraikannan, M. R. Sunny, and S. C. Pradhan, “Chirality dependent mechanical properties of carbon nano-structures,” Materials Research Express. 2019. link Times cited: 5 Abstract: Carbon networked one dimensional and two dimensional nano-st… read moreAbstract: Carbon networked one dimensional and two dimensional nano-structures of Carbon Nanotube (CNT) and Graphene have been analyzed for inherent mechanical properties with help of soft experiment (Molecular Dynamics). The hexagonal networked carbon structures are defined theoretically by the parameter called Chiral angle. The changes in the angle shows significant changes in material and geometrical properties. Initially we chose a CNT with a particular chiral index and generated CNTs with various topologies and same diameter by changes in chiral indices. Graphene structure having chiral indices similar to those of the CNT structures have also been considered. The uniaxial tensile tests have been performed on all the structures using Molecular Dynamics (MD) simulations. The dependency of ultimate stress, ultimate strain, Young’s modulus, fracture stress, fracture strain and Poisson’s ratio on chirality of the structures has been investigated. The MD simulations have been carried out using AIREBO potential with the cut-off function parameters 1.42 Å and 2.46 Å to avoid any non-physical behavior. read less NOT USED (low confidence) K. B. Shingare and S. I. Kundalwal, “Static and dynamic response of graphene nanocomposite plates with flexoelectric effect,” Mechanics of Materials. 2019. link Times cited: 44 NOT USED (low confidence) H. Xu and T. Dumitricǎ, “Role of inter-tube corrugation in the dynamic sliding friction of concentric carbon nanotubes: Implications for nanomechanical oscillator devices,” Extreme Mechanics Letters. 2019. link Times cited: 5 NOT USED (low confidence) Z. Zhang, Y. Hong, B. Hou, Z. Zhang, M. Negahban, and J. Zhang, “Accelerated discoveries of mechanical properties of graphene using machine learning and high-throughput computation,” Carbon. 2019. link Times cited: 60 NOT USED (low confidence) K. Nomura et al., “Force-driven reversible liquid–gas phase transition mediated by elastic nanosponges,” Nature Communications. 2019. link Times cited: 36 NOT USED (low confidence) S. Nakarmi, T. Sohail, and S. Roy, “An investigation of flaw-size independence of cohesive traction-separation law at the nanoscale: A molecular dynamics study,” Engineering Fracture Mechanics. 2019. link Times cited: 3 NOT USED (low confidence) S. Matera, W. Schneider, A. Heyden, and A. Savara, “Progress in Accurate Chemical Kinetic Modeling, Simulations, and Parameter Estimation for Heterogeneous Catalysis,” ACS Catalysis. 2019. link Times cited: 115 Abstract: Chemical kinetic modeling in heterogeneous catalysis is adva… read moreAbstract: Chemical kinetic modeling in heterogeneous catalysis is advancing in its ability to provide qualitatively or even quantitatively accurate prediction of real-world behavior because of new advances in the physical and chemical representations of catalytic systems, estimation of relevant kinetic parameters, and capabilities in kinetic modeling. This Perspective describes current trends and future areas of advancement in chemical kinetic modeling, simulation, and parameter estimation: ranging from elementary step calculations to multiscale modeling to the role of advanced statistical methods for incorporating uncertainties in predictions. Multiple new or growing methodologies are covered, examples are provided, and forward-looking topics for advancement are noted. read less NOT USED (low confidence) A. Khorsandi-Langol and S. M. Hashemianzadeh, “Distinct Understanding of Constant-Volume/Variable-Pressure Experimental Method on CO2 Capture Using Graphtriyne Membrane through an Atomistic Approach,” The Journal of Physical Chemistry C. 2019. link Times cited: 3 Abstract: In this research, the nonequilibrium thermodynamics of the g… read moreAbstract: In this research, the nonequilibrium thermodynamics of the gas permeation process based on the constant-volume/variable-pressure experimental method was explored with the novel algorithm using atomistic simulation. The hybrid force field and the in-house FORTRAN code were used in the proposed algorithm and the pressure was considered through the exerted spring force within the NVT ensemble. The graphtriyne layers were utilized as a porous membrane for the investigation of N2 and CO2 permeation. Two parameters of free tendency and channel cross-sectional area (CCSA) were introduced to analyze the result of the simulation. The result of the simulation revealed that the effect of the CCSA on N2 permeation decreases as the number of graphtriyne layers increases, whereas the CO2 permeation through the membrane is independent of the CCSA. Also, there is a distinct permeation behavior for CO2 and N2 so that first CO2 is trapped within the graphtriyne layers and then permeation is started. In contrast, trapping o... read less NOT USED (low confidence) A. Obliger, P.-L. Valdenaire, F. Ulm, R. Pellenq, and J.-M. Leyssale, “Methane Diffusion in a Flexible Kerogen Matrix.,” The journal of physical chemistry. B. 2019. link Times cited: 27 Abstract: It has been recognized that the microporosity of shale organ… read moreAbstract: It has been recognized that the microporosity of shale organic matter, especially that of kerogen, strongly affects the hydrocarbon recovery process from unconventional reservoirs. So far, the numerical studies on hydrocarbon transport through the microporous phase of kerogen have neglected the effect of poromechanics, that is, the adsorption-induced deformations, by considering kerogen as a frozen, nondeformable, matrix. Here, we use molecular dynamics simulations to investigate methane diffusion in an immature (i.e., with high H/C ratio) kerogen matrix, while explicitly accounting for adsorption-induced swelling and internal matricial motions, covering both phonons and nonperiodic internal deformations. However, in the usual frozen matrix approximation, diffusivity decreases with increasing fluid loading, as evidenced by a loss of free volume, accounting for adsorption-induced swelling that gives rise to an increase in free volume and, hence, in diffusivity. The obtained trend is further rationalized using a Fujita-Kishimoto free volume theory initially developed in the context of diffusion in swelling polymers. We also quantify the enhancing effect of the matrix internal motions (i.e., at fixed volume) and show that it roughly gives an order of magnitude increase in diffusivity with respect to a frozen matrix, thanks to fluctuations in the pore connectivity. We eventually discuss the possible implications of this work to explain the productivity slowdown of hydrocarbon recovery from shale immature reservoirs. read less NOT USED (low confidence) Z. Zhang, H. Zhang, J. Chai, L. Zhao, and Z. Li, “Reactive molecular dynamics simulation of oil shale combustion using the ReaxFF reactive force field,” Energy Sources, Part A: Recovery, Utilization, and Environmental Effects. 2019. link Times cited: 8 Abstract: ABSTRACT Oil shale is a kind of complex carbonaceous materia… read moreAbstract: ABSTRACT Oil shale is a kind of complex carbonaceous material which is an important energy source for electricity production. Reactive molecular dynamics (RMD) simulation is a useful tool to examine the chemical reactions occurring in complex processes, providing a realistic structural representation and an applicable reactive force field (ReaxFF). The molecular dynamics (MD) simulations and Reaxff were employed to investigate the chemical mechanisms and products distribution in the process of oil shale combustion. The combustion process was explored by dividing it into three stages: the process of kerogen oxidation was primarily initialized by the cleavages of weak bonds in stage I; in stage II, kerogen structure was devolatilized to form char particles, then char and most of shale oil combusted; the small molecules (gases and a small of shale oil) generated water and carbon dioxide by O2 molecules, O and OH radicals attacking in stage III. The purpose of the present study was deeply understanding the combustion mechanism and conversion reactions associated with sulfur and nitrogen species of oil shale kerogen during this period by investigating the bond breaking, characteristic products distribution, and typical reaction pathways. read less NOT USED (low confidence) H. Zhang, S. Hu, H. Wang, Y. Chen, H. Wang, and Y. Ni, “Thermal transport in three-dimensional carbon honeycombs,” Chinese Journal of Physics. 2019. link Times cited: 4 NOT USED (low confidence) C. Nguyen and A. Beskok, “Charged nanoporous graphene membranes for water desalination.,” Physical chemistry chemical physics : PCCP. 2019. link Times cited: 26 Abstract: Water desalination using positively and negatively charged s… read moreAbstract: Water desalination using positively and negatively charged single-layer nanoporous graphene membranes are investigated using molecular dynamics (MD) simulations. Pressure-driven flows are induced by the motion of specular reflection boundaries with a constant speed, resulting in a prescribed volumetric flow rate. Simulations are performed for 14.40 Å hydraulic pore diameter membrane with four different electric charges distributed on the pore edges. Salt rejection efficiencies and the resulting pressure drops are compared with the previously obtained base-line case of 9.9 Å diameter pristine nanoporous graphene membrane, which exhibits 100% salt rejection with 35.02 MPa pressure drop at the same flow rate. Among the positively charged cases, q = 9e shows 100% and 98% rejection for Na+ and Cl- ions respectively, with 35% lower pressure drop than the reference. For negatively charged pores, optimum rejection efficiencies of 94% and 93% are obtained for Na+ and Cl- ions for the q = -6e case, which requires 60.6% less pressure drop than the reference. The results indicate the high potential of using charged nanoporous graphene membranes in reverse osmosis (RO) desalination systems with enhanced performance. read less NOT USED (low confidence) N. V. Maksyuta, V. Vysotskii, S. Efimenko, A. Sabirov, G. Filippov, and I. V. Lysova, “Evolution of the Spatial Distribution of Hydrogen Atoms Channeling along Non-Chiral Carbon Nanotubes,” Journal of Surface Investigation: X-ray, Synchrotron and Neutron Techniques. 2019. link Times cited: 1 NOT USED (low confidence) S. Rahman, J. Song, and C.-D. Yeo, “Computational study on surface energy of amorphous DLC with respect to hybridization state of carbon and potential functions,” Diamond and Related Materials. 2019. link Times cited: 12 NOT USED (low confidence) W. Ge, Q. Chang, C. Li, and J. Wang, “Multiscale structures in particle–fluid systems: Characterization, modeling, and simulation,” Chemical Engineering Science. 2019. link Times cited: 76 NOT USED (low confidence) W. Yafei, C. Wang, and H. Tan, “Intrinsic edge warping of graphene nanoribbon boost molecular directional motion: Toward the novel nanodevices,” Physics Letters A. 2019. link Times cited: 5 NOT USED (low confidence) M. Tuna and M. Kırca, “Unification of Eringen’s nonlocal parameter through an optimization-based approach,” Mechanics of Advanced Materials and Structures. 2019. link Times cited: 21 Abstract: An evolutionary optimization approach is presented to provid… read moreAbstract: An evolutionary optimization approach is presented to provide unified material properties through focusing on sample problems of one-dimensional (1D) atomic chains and armchair SWCNTs. Optimum values are calculated by matching the buckling loads and natural frequencies obtained from the atomistic simulations and Eringen’s nonlocal theory based finite element models for bars and beams. Sufficiently accurate results regardless of dimensions, mechanical problems, and boundary conditions of aforementioned types of structures are provided, and the feasibility of the integral form of nonlocal theory along with the inadequate character of local theory in the existence of long range interactions are clearly presented. read less NOT USED (low confidence) X. Li, A. Wang, and K.-R. Lee, “Role of unsaturated hydrocarbon lubricant on the friction behavior of amorphous carbon films from reactive molecular dynamics study,” Computational Materials Science. 2019. link Times cited: 12 NOT USED (low confidence) J. Silveira and A. Muniz, “Chain- and chainmail-like nanostructures from carbon nanotube rings,” Computational Materials Science. 2019. link Times cited: 3 NOT USED (low confidence) H. Zou, W. Jiang, L. Chen, Q. Qin, and Y. Lin, “The origin of self-excited oscillation of double-walled carbon nanotubes,” Materials Research Express. 2019. link Times cited: 4 Abstract: The mechanism of self-excited oscillation of the inner tube … read moreAbstract: The mechanism of self-excited oscillation of the inner tube in a double-walled carbon nanotube (DWCNT) is investigated with the aid of the molecular dynamics (MD) simulation. In the simulation, the outer tube is fixed, and the inner tube is free in terms of axial displacement and rotation. The MD results indicate that a van der Walls (vdW) energy barrier to axial oscillation exists in both commensurate and incommensurate DWCNTs, and this vdW energy barrier can be broken through at sufficient high temperatures or with sufficiently large rotational excitations. The max amplitude of axial oscillation of the inner tube can reach larger than half distance of the difference between the length of the inner and outer tubes when the temperature exceeds around 10 ∼ 100 K for the incommensurate tubes and around 500 ∼ 700 K for the commensurate tubes. Above the critical temperature, the rotational excitation cannot increase the axial oscillation amplitude of the inner tube, but below the critical temperature, a sufficiently large rotational excitation can trigger an axial oscillation with large amplitude for incommensurate DWCNTs. Our findings are therefore helpful to both the understanding of oscillation mechanism and the design of nano-devices at ultralow temperature. read less NOT USED (low confidence) B. Yang, D. Li, L. Qi, T. Li, and P. Yang, “Thermal properties of triangle nitrogen-doped graphene nanoribbons,” Physics Letters A. 2019. link Times cited: 18 NOT USED (low confidence) C.-T. Chen and G. X. Gu, “Effect of Constituent Materials on Composite Performance: Exploring Design Strategies via Machine Learning,” Advanced Theory and Simulations. 2019. link Times cited: 41 Abstract: Nature assembles a range of biological composites with remar… read moreAbstract: Nature assembles a range of biological composites with remarkable mechanical properties despite being composed of relatively weak polymeric and ceramic components. However, the architectures of biomaterials cannot be considered as optimal designs for engineering applications since biomaterials are constantly evolving for multiple functions beyond carrying external loading. Here, it is aimed to develop an intelligent approach to design superior composites from scratch—starting from constituent materials. A systematic computational investigation of the effect of constituent materials (assumed to be perfectly brittle) on the behavior of composites using an integrated approach combining finite element method, molecular dynamics, and machine learning (ML) is reported. It is demonstrated that instead of using brute‐force methods, machine learning is a much more efficient approach and can generate optimal designs with similar performance to those obtained from an exhaustive search. Furthermore, it is shown that the toughening and strengthening mechanism observed in composites at the continuum‐scale by combining stiff and soft constituents is valid for nanomaterials as well. Results show that high‐performing designs of graphene nanocomposites can be generated using our ML approach. This novel ML‐based design framework can be applied to other material systems to study a variety of structure–property relationships over several length‐scales. read less NOT USED (low confidence) N. Song, Z. Gao, Y. Zhang, and X. Li, “B4C nanoskeleton enabled, flexible lithium-sulfur batteries,” Nano Energy. 2019. link Times cited: 78 NOT USED (low confidence) A. Shomali and M. Mahnama, “Effect of recovery process on the efficiency of nano-diamond synthesis by shock compression,” Computational Materials Science. 2019. link Times cited: 2 NOT USED (low confidence) H. O. Al-Misbahi, D. Faux, L. Tang, and M. Abulkhair, “Visualizing molecular phonons using eigenvectors with smallest eigenvalues of the atomic trajectories,” Computational Materials Science. 2019. link Times cited: 1 NOT USED (low confidence) D. Zhang, P. Yi, L. Peng, X. Lai, and J. Pu, “Amorphous carbon films doped with silver and chromium to achieve ultra-low interfacial electrical resistance and long-term durability in the application of proton exchange membrane fuel cells,” Carbon. 2019. link Times cited: 49 NOT USED (low confidence) Y. Yang, K. Cai, J. Shi, and Y. Xie, “Nanotextures from orthogonal graphene ribbons: Thermal stability evaluation,” Carbon. 2019. link Times cited: 15 NOT USED (low confidence) A. S. Sinitsa, I. Lebedeva, A. Popov, and A. Knizhnik, “Corrigendum to ‘Long triple carbon chains formation by heat treatment of graphene nanoribbon: Molecular dynamics study with revised Brenner potential’ [Carbon 140 (2018) 543–556],” Carbon. 2019. link Times cited: 2 NOT USED (low confidence) X. Meng et al., “A theoretical analysis on self-collapsing of nanotubes,” International Journal of Solids and Structures. 2019. link Times cited: 9 NOT USED (low confidence) Y. Li, S. Lahkar, Q. Wei, P. Qiao, and H. Ye, “Strength nature of two-dimensional woven nanofabrics under biaxial tension,” International Journal of Damage Mechanics. 2019. link Times cited: 1 Abstract: Woven nanostructures have been acknowledged as a platform fo… read moreAbstract: Woven nanostructures have been acknowledged as a platform for solar cells, supercapacitors, and sensors, making them especially of interest in the fields of materials sciences, nanotechnology, and renewable energy. By employing molecular dynamics simulations, the mechanical properties of two-dimensional woven nanofabrics under biaxial tension are evaluated. Two-dimensional woven nanostructures composed of graphene and graphyne nanoribbons are examined. Dynamic failure process of both graphene woven nanofabric and graphyne woven nanofabric with the same woven unit cell initiates at the edge of interlaced ribbons accompanied by the formation of cracks near the crossover location of yarns. Further stress analysis reveals that such failure mode is attributed to the compression between two overlaced ribbons and consequently their deformation under biaxial tension, which is sensitive to the lattice structure of nanoribbon as well as the density of yarns in fabric. Systemic comparisons between nanofabrics with different yarn width and interval show that the strength of nanofabric can be effectively controlled by tuning the space interval between nanoribbons. For nanofabrics with fixed large gap spacing, the strength of fabric does not change with the ribbon width, while the strength of nanofabric with small gap spacing decreases anomalously with the increase in yarn density. Such fabric strength dependency on gap spacing is the result of the stress concentration caused by the interlace compression. The outcomes of simulation suggest that the compacted arrangement of yarns in carbon woven nanofabric structures should be avoided to achieve high strength performance. read less NOT USED (low confidence) Y. Gao, X. Zhang, D. Tang, and M. Hu, “Unexpected anisotropy of (14,14,14)-Graphyne: A comprehensive study on the thermal transport properties of graphyne based nanomaterials,” Carbon. 2019. link Times cited: 18 NOT USED (low confidence) Y. Wang, J. Lei, and Z. Liu, “Molecular dynamics study on the anisotropic Poisson’s ratio of the graphene,” Diamond and Related Materials. 2019. link Times cited: 12 NOT USED (low confidence) C. Zhang, C. Lu, L. Pei, J. Li, R. Wang, and K. Tieu, “The negative Poisson’s ratio and strengthening mechanism of nanolayered graphene/Cu composites,” Carbon. 2019. link Times cited: 53 NOT USED (low confidence) H. Jin, H. Duan, and J. Shi, “Reversing rotation of a nanomotor by introducing a braking BNC nanotube,” Computational Materials Science. 2019. link Times cited: 7 NOT USED (low confidence) Y. Wang, C. Wang, Y. Zhang, and H. Tan, “Graphene kirigami as reinforcement and interfacial bonding effect for toughness and strength of silicon-based nanocomposites,” Computational Materials Science. 2019. link Times cited: 3 NOT USED (low confidence) H. Aktulga, C. Knight, P. K. Coffman, K. A. O’Hearn, T.-R. Shan, and W. Jiang, “Optimizing the performance of reactive molecular dynamics simulations for many-core architectures,” The International Journal of High Performance Computing Applications. 2019. link Times cited: 6 Abstract: Reactive molecular dynamics simulations are computationally … read moreAbstract: Reactive molecular dynamics simulations are computationally demanding. Reaching spatial and temporal scales where interesting scientific phenomena can be observed requires efficient and scalable implementations on modern hardware. In this article, we focus on optimizing the performance of the widely used LAMMPS/ReaxC package for many-core architectures. As hybrid parallelism allows better leverage of the increasing on-node parallelism, we adopt thread parallelism in the construction of bonded and nonbonded lists and in the computation of complex ReaxFF interactions. To mitigate the I/O overheads due to large volumes of trajectory data produced and to save users the burden of post-processing, we also develop a novel in situ tool for molecular species analysis. We analyze the performance of the resulting ReaxC-OMP package on two different architectures: (i) Mira, an IBM Blue Gene/Q system and (ii) Cori-II, a Cray XC-40 sytem with Knights Landing processors. For Pentaerythritol tetranitrate (PETN) systems of sizes ranging from 32 thousand to 16.6 million particles, we observe speedups in the range of 1.5–4.5×. We observe sustained performance improvements for up to 262,144 cores (1,048,576 processes) of Mira and a weak scaling efficiency of 91.5% in large simulations containing 16.6 million particles. The in situ molecular species analysis tool incurs only insignificant overheads across various system sizes and runs configurations. read less NOT USED (low confidence) M. Bonnin, C. Falvo, F. Calvo, T. Pino, and P. Parneix, “Simulating the structural diversity of carbon clusters across the planar-to-fullerene transition,” Physical Review A. 2019. link Times cited: 9 Abstract: Together with the second generation REBO reactive potential,… read moreAbstract: Together with the second generation REBO reactive potential, replica-exchange molecular dynamics simulations coupled with systematic quenching were used to generate a broad set of isomers for neutral C$_n$ clusters with $n=24$, 42, and 60. All the minima were sorted in energy and analyzed using order parameters to monitor the evolution of their structural and chemical properties. The structural diversity measured by the fluctuations in these various indicators is found to increase significantly with energy, the number of carbon rings, especially 6-membered, exhibiting a monotonic decrease in favor of low-coordinated chains and branched structures. A systematic statistical analysis between the various parameters indicates that energetic stability is mainly driven by the amount of sp$^2$ hybridization, more than any geometrical parameter. The astrophysical relevance of these results is discussed in the light of the recent detection of C$_{60}$ and C$_{60}^+$ fullerenes in the interstellar medium. read less NOT USED (low confidence) W. Wang, J. Shen, and Q. C. He, “Microscale superlubricity of graphite under various twist angles,” Physical Review B. 2019. link Times cited: 19 Abstract: The relative rotation and translation of graphene and graphi… read moreAbstract: The relative rotation and translation of graphene and graphite layers lead to remarkable physical and mechanical phenomena. One such phenomenon for graphite corresponds to the ultralow static and dynamic friction between incommensurate graphene layers, referred to as superlubricity. Even though many studies have been dedicated to this promising phenomenon in recent years, an experimental characterization and a quantitative determination of the effect of relative twist angles on microscale superlubricity are still lacking. The present paper investigates the superlubric properties of microscale graphite under different twist angels by shearing graphite with respect to a substrate. Experimentally, it is surprisingly found that the superlubricity of microscale graphite is almost invariant within a wide range of bicrystal twist angles $({6}^{\ensuremath{\circ}}\ensuremath{\le}\ensuremath{\theta}\ensuremath{\le}{59}^{\ensuremath{\circ}})$. This result is confirmed by carrying out molecular dynamics simulations. Further, the influences of twist angles and normal load on the incommensurate-to-commensurate transition are revealed. The estimated critical transition angle is less than 0.1 \ifmmode^\circ\else\textdegree\fi{}. These results allow a better understanding of mesoscopic scale superlubricity and extend its application field. read less NOT USED (low confidence) J. Liu et al., “Vacancy-controlled friction on 2D materials: Roughness, flexibility, and chemical reactions,” Carbon. 2019. link Times cited: 27 NOT USED (low confidence) B. Liu and K. Zhou, “Recent progress on graphene-analogous 2D nanomaterials: Properties, modeling and applications,” Progress in Materials Science. 2019. link Times cited: 208 NOT USED (low confidence) N. C. Briggs et al., “A roadmap for electronic grade 2D materials,” 2D Materials. 2019. link Times cited: 180 Abstract: Since their modern debut in 2004, 2-dimensional (2D) materia… read moreAbstract: Since their modern debut in 2004, 2-dimensional (2D) materials continue to exhibit scientific and industrial promise, providing a broad materials platform for scientific investigation, and development of nano- and atomic-scale devices. A significant focus of the last decade’s research in this field has been 2D semiconductors, whose electronic properties can be tuned through manipulation of dimensionality, substrate engineering, strain, and doping (Mak et al 2010 Phys. Rev. Lett. 105 136805; Zhang et al 2017 Sci. Rep. 7 16938; Conley et al 2013 Nano Lett. 13 3626–30; Li et al 2016 Adv. Mater. 28 8240–7; Rhodes et al 2017 Nano Lett. 17 1616–22; Gong et al 2014 Nano Lett. 14 442–9; Suh et al 2014 Nano Lett. 14 6976–82; Yoshida et al 2015 Sci. Rep. 5 14808). Molybdenum disulfide (MoS2) and tungsten diselenide (WSe2) have dominated recent interest for potential integration in electronic technologies, due to their intrinsic and tunable properties, atomic-scale thicknesses, and relative ease of stacking to create new and custom structures. However, to go ‘beyond the bench’, advances in large-scale, 2D layer synthesis and engineering must lead to ‘exfoliation-quality’ 2D layers at the wafer scale. This roadmap aims to address this grand challenge by identifying key technology drivers where 2D layers can have an impact, and to discuss synthesis and layer engineering for the realization of electronic-grade, 2D materials. We focus on three fundamental areas of research that must be heavily pursued in both experiment and computation to achieve high-quality materials for electronic and optoelectronic applications. read less NOT USED (low confidence) A. Wei, Y. Li, W. Ren, and W. Ye, “An interlayer/intralayer coupling mechanism for the thermal characteristics of polycrystalline few-layer graphene,” Applied Physics Letters. 2019. link Times cited: 5 Abstract: In this paper, the dependence of thermal conductivities of p… read moreAbstract: In this paper, the dependence of thermal conductivities of polycrystalline few-layer graphene (PFG) on the layer number and in-plane strain is systematically studied using the reverse non-equilibrium molecular dynamics method. The thermal conductivities are shown to decrease with the increased layer number, but the dependency on the layer number is anomalously less than what has been observed in single-crystalline few-layer graphene. Through a detailed analysis of the in-plane and out-of-plane phonon density of states, it is found that such a weak dependence can be explained by an interlayer/intralayer coupling mechanism, which is sensitive to the presence of grain boundaries. It is also found that this coupling mechanism can also be greatly influenced by in-plane tension, which indicates that thermal conductivities of PFG can be manipulated using in-plane tensile strains in addition to grain boundaries. The present study provides fundamental understanding and valuable guidelines for the design of graphene based flexible devices for efficient thermal management.In this paper, the dependence of thermal conductivities of polycrystalline few-layer graphene (PFG) on the layer number and in-plane strain is systematically studied using the reverse non-equilibrium molecular dynamics method. The thermal conductivities are shown to decrease with the increased layer number, but the dependency on the layer number is anomalously less than what has been observed in single-crystalline few-layer graphene. Through a detailed analysis of the in-plane and out-of-plane phonon density of states, it is found that such a weak dependence can be explained by an interlayer/intralayer coupling mechanism, which is sensitive to the presence of grain boundaries. It is also found that this coupling mechanism can also be greatly influenced by in-plane tension, which indicates that thermal conductivities of PFG can be manipulated using in-plane tensile strains in addition to grain boundaries. The present study provides fundamental understanding and valuable guidelines for the design of graphen... read less NOT USED (low confidence) A. Sharifian, M. Baghani, J. Wu, G. Odegard, and M. Baniassadi, “Insight into Geometry-Controlled Mechanical Properties of Spiral Carbon-Based Nanostructures,” The Journal of Physical Chemistry C. 2019. link Times cited: 18 Abstract: The spiral structures of carbon-based materials such as coil… read moreAbstract: The spiral structures of carbon-based materials such as coiled carbon nanotube (CCNT) and graphene helicoid have attracted great attention for use in electrical and mechanical nanodevices. There are a couple of main reasons for this attitude such as striking properties and behavioral diversity with regard to the ever-increasing need for miniaturization of devices. In this research, using atomistic simulations, the effects of geometric parameters (e.g., cross-sectional shape, pitch angle, inner diameter, and outer diameter) on the mechanical properties of CCNT are studied. Interestingly, the results show that the mechanical properties (e.g., Young’s modulus, stretchability, etc.) have a heavy reliance on CCNTs’ geometric parameters. The stretching of the CCNT increases with the raising inner radius. Geometric changes affect the various stages that the CCNTs encounter during tensile and compression tests. The different mechanical behavior of various types of CCNTs leads to their diverse applications. Thus, ... read less NOT USED (low confidence) N. A. Mehta, A. Rayabharam, and D. Levin, “Correction: Simulations of surface evolution due to particulate-surface interaction,” AIAA Scitech 2019 Forum. 2019. link Times cited: 0 NOT USED (low confidence) S. Wang, C. Wang, Z. Peng, and S. Chen, “Moving Behavior of Nanodroplets on Wedge-Shaped Functional Surfaces,” The Journal of Physical Chemistry C. 2019. link Times cited: 17 Abstract: Surface functionalization has important application prospect… read moreAbstract: Surface functionalization has important application prospects in many aspects, for example, anti-drag, anti-pollution, anti-icing, self-cleaning, reversible adhesion, water collection, and so forth. Recently, a new technique of functional surface was proposed, in which a droplet can be activated to move from the narrow end of a wedge-shaped hydrophilic region imbedded in a hydrophobic surface to the wide end. Systematic molecular dynamics (MD) simulations and theoretical analysis are carried out in this paper in order to understand the motion mechanism, and more systematic designs for advanced functional surfaces are further proposed. It is found that the potential energy of the droplet decreases continuously as a function of distance when the droplet moves from the narrow end of the wedge-shaped track to the wide end and the corresponding potential energy achieves the minimum when the droplet completely enters the hydrophilic region. Effects of the wedge angle of hydrophilic area and the size of the drop... read less NOT USED (low confidence) B. Zhang, X. Liao, Y.-N. Chen, H. Xiao, Y. Ni, and X. Chen, “Rapid Programmable Nanodroplet Motion on a Strain-Gradient Surface.,” Langmuir : the ACS journal of surfaces and colloids. 2019. link Times cited: 11 Abstract: When a nanodroplet is placed on a lattice surface, an inhomo… read moreAbstract: When a nanodroplet is placed on a lattice surface, an inhomogeneous surface strain field perturbs the balance of van der Waals force between the nanodroplet and surface, thus providing a net driving force for nanodroplet motion. Using molecular dynamics and theoretical analysis, we study the effect of strain gradient on modulating the movement of a nanodroplet. Both modeling and simulation show that the driving force is opposite to the direction of strain gradient, with a magnitude that is proportional to the strain gradient as well as nanodroplet size. Two representative surfaces, graphene and copper (111) plane, are exemplified to demonstrate the controllable motion of the nanodroplet. When the substrate undergoes various types of reversible deformations, multiple motion modes of nanodroplets can be feasibly achieved, including acceleration, deceleration, and turning, becoming a facile strategy to manipulate nanodroplets along a designed two-dimensional pathway. read less NOT USED (low confidence) E. Iakovlev, P. Zhilyaev, and I. Akhatov, “Obtaining the state of matter inside graphene nanobubble from its shape,” Journal of Physics: Conference Series. 2019. link Times cited: 4 Abstract: Graphene nanobubble (GN) is a system consisting of the subst… read moreAbstract: Graphene nanobubble (GN) is a system consisting of the substrate, the graphene sheet and the substance trapped between them. Radius of GN regulates the pressure inside the bubble and for small GN with radius of several nanometers extreme pressures up to 1 GPa due to the van der Waals interaction can be observed. Therefore trapped substances inside GN can exist in a number of different states of matter. In this study we theoretically establish the connection between the shape of GN and the state of the trapped material inside. Both atomistic and continuum models are used to describe mechanical and thermodynamic properties of GN. Atomistic approach is applied to calculate the elastic constants and the adhesion energies. These parameters are used as inputs for the following analyses in terms of continuum media. read less NOT USED (low confidence) A. Stepanov, “Manybody effects at low-energy ions channeling in carbon nanotubes,” Journal of Physics: Conference Series. 2019. link Times cited: 0 Abstract: The molecular dynamics method has been used to consider many… read moreAbstract: The molecular dynamics method has been used to consider manybody interactions at the channeling of the ion in a carbon nanotube, and the importance of their accounting has been shown. The effect of the wall elastic perturbation of a nanotube on a channeled particle is studied. It was confirmed that when ion with perturbation of the wall of the carbon nanotube interaction is taken into account, the ion energy loss is reduced by a factor of 1.5-3. It is shown that as the temperature of the nanotube decreases, the effect of ion interaction with wall perturbation acquires a more determinate character. Within the framework of the considered model, electronic stopping power on the electronic subsystem of a carbon nanotube is small compared to energy losses of an ion in elastic collisions on atoms of a nanotube wall. read less NOT USED (low confidence) F. Vuković, J.-M. Leyssale, P. Aurel, and N. Marks, “Evolution of Threshold Displacement Energy in Irradiated Graphite,” Physical Review Applied. 2018. link Times cited: 14 Abstract: HAL is a multi-disciplinary open access archive for the depo… read moreAbstract: HAL is a multi-disciplinary open access archive for the deposit and dissemination of scientific research documents, whether they are published or not. The documents may come from teaching and research institutions in France or abroad, or from public or private research centers. L’archive ouverte pluridisciplinaire HAL, est destinée au dépôt et à la diffusion de documents scientifiques de niveau recherche, publiés ou non, émanant des établissements d’enseignement et de recherche français ou étrangers, des laboratoires publics ou privés. Evolution of Threshold Displacement Energy with Dose Studied by Molecular Dynamics Simulations on Irradiated Graphite Models Filip Vukovic, Nigel A Marks, Philippe Aurel, Jean Marc Leyssale read less NOT USED (low confidence) A. Giri, J. Tomko, J. Gaskins, and P. Hopkins, “Large tunability in the mechanical and thermal properties of carbon nanotube-fullerene hierarchical monoliths.,” Nanoscale. 2018. link Times cited: 6 Abstract: Carbon based materials have attracted much attention as buil… read moreAbstract: Carbon based materials have attracted much attention as building blocks in technologically relevant nanocomposites due to their unique chemical and physical properties. Here, we propose a new class of hierarchical carbon based nano-truss structures consisting of fullerene joints attached with carbon nanotubes as the truss forming a three-dimensional network. Atomistic molecular dynamics simulations allow us to systematically demonstrate the ability to simultaneously control the mechanical and thermal properties of these structures, elucidating their unique physical properties. Specifically, we perform uniaxial tensile and compressive loading to show that by controlling the length of the carbon nanotube trusses, the mechanical properties can be tuned over a large range. Furthermore, we utilize the Green-Kubo method under the equilibrium molecular dynamics simulations framework to show that the thermal conductivities of these structures can be manipulated by varying the densities of the overall structures. This work provides a computational framework guiding future research on the manipulation of the fundamental physical properties in these organic-based hierarchical structures composed of carbon nanotubes and fullerenes as building blocks. read less NOT USED (low confidence) F. Liu et al., “Understanding the mechanical properties and deformation behavior of 3-D graphene-carbon nanotube structures,” Materials & Design. 2018. link Times cited: 16 NOT USED (low confidence) Y. Feng, J. Zhu, and D. Tang, “Dependence of carbon nanotube array-silicon interface thermal conductance on array arrangement and filling fraction,” Applied Thermal Engineering. 2018. link Times cited: 6 NOT USED (low confidence) P. Demingos and A. Muniz, “Carbon nanothreads from polycyclic aromatic hydrocarbon molecules,” Carbon. 2018. link Times cited: 21 NOT USED (low confidence) S. Hemadi, S. Habibi, and P. Malekzadeh, “Physically consistent nonlocal kernels for predicting vibrational characteristics of single walled carbon nanotubes,” Materials Today Communications. 2018. link Times cited: 7 NOT USED (low confidence) X. Li, A. Wang, and K.-R. Lee, “Tribo‐Induced Structural Transformation and Lubricant Dissociation at Amorphous Carbon–Alpha Olefin Interface,” Advanced Theory and Simulations. 2018. link Times cited: 20 Abstract: Amorphous carbon (a‐C) combined with a fluid lubricant is ca… read moreAbstract: Amorphous carbon (a‐C) combined with a fluid lubricant is capable of providing an ultra‐low friction state and thus achieving long lifetime and reliable operation. However, the understanding of the atomistic process occurring at the sliding friction interfaces, especially the interfacial structure transformation and lubricant dissociation at different contact states, is still not well understood. Here, using reactive molecular dynamics simulation, the friction behavior of a self‐mated a‐C system composited with different alpha olefins (AOs) as lubricants is comparatively investigated, and the results present that due to the co‐existence of tribo‐induced thermal and shearing effects, AOs exhibit different physicochemical behaviors at the a‐C–a‐C interface compared to that at the a‐C surface. Although introducing AOs into a self‐mated a‐C system reduces the friction coefficient, its efficiency strongly relies on the AO variety and contact pressure. The pressure‐driven dissociation of AOs passivates the friction interface, resulting in the evolution of the primary friction mechanism from hydrodynamic lubrication to interfacial passivation that is not accessible by experimental characterization. The corresponding scission sites of different AOs are demonstrated, which enriches the fundamental understanding on sliding friction behavior and offers a comprehensive design criterion for lubricants (viscosity, chain length, and bond saturated states) and a‐C to achieve nearly frictionless sliding interface. read less NOT USED (low confidence) J. Baimova, I. Evazzade, L. Kalyakin, S. Dmitriev, and K. Zhou, “Dehydrogenation of graphane by external driving,” IOP Conference Series: Materials Science and Engineering. 2018. link Times cited: 0 Abstract: The dehydrogenation of graphane due to external harmonic dri… read moreAbstract: The dehydrogenation of graphane due to external harmonic driving is studied by molecular dynamics simulation. It is found that the dehydrogenation can be initiated by harmonic driving of carbon atoms with as small amplitude as 0.02 Å, if the driving frequency is somewhat above the small-amplitude vibration frequency of the C-H bond. Thus, a novel mechanism for the dehydrogenation of graphane is reported. read less NOT USED (low confidence) M. Li, H. Li, F. Li, and Z. Kang, “Adhesion of Partially and Fully Collapsed Nanotubes,” Journal of Applied Mechanics. 2018. link Times cited: 6 Abstract: The competition between the structural rigidity and the van … read moreAbstract: The competition between the structural rigidity and the van der Waals interactions may lead to collapsing of aligned nanotubes, and the resulting changes of both configurations and properties promise the applications of nanotubes in nano-composites and nano-electronics. In this paper, a finite-deformation model is applied to study the adhesion of parallel multiwall nanotubes with both partial and full collapsing, in which the noncontact adhesion energy is analytically determined. The analytical solutions of both configurations and energies of collapsed nanotubes are consistent with the molecular dynamics (MD) results, demonstrating the effectiveness of the finite-deformation model. To study the critical conditions of generating the partially and fully collapsed multiwall nanotubes, our analytical model gives the predictions for both the geometry- and energy-related critical diameters, which are helpful for the stability analysis and design of nanotube-based nano-devices. read less NOT USED (low confidence) M. Motamedi and A. Esfandiarpour, “Effect of Center Crack on Mechanical Properties of Graphene,” Journal of Nano Research. 2018. link Times cited: 2 Abstract: Graphene is a thin sheet with special properties and complic… read moreAbstract: Graphene is a thin sheet with special properties and complicated mechanical behavior. It’s important to study graphene experimentally and theoretically. Stone–Wales defects, cracks and atom vacancy are popular defects in carbon allotropes especially in graphene. In this paper, effect of center cracks on graphene was discussed. At first, mechanical properties of non-defected graphene sheet was obtained using molecular dynamics simulation. Comparing result with theoretical and experimental studies showing good agreements and proofing the results. Then, 8 different cracks were considered in center of graphene sheets. Stress-strain curves of defected graphene sheets with different tension strain rates were plotted. The results showed that increasing crack length lead to decreasing Young’s modulus of graphene from 870GPa to 670GPa. Also, fracture occurred in less tensile strain. In the following, structural molecular mechanics method was used to simulate cracked graphene sheets. The results showed good agreement between two methods. read less NOT USED (low confidence) X. Liu, J. Gao, G. Zhang, and Y.-W. Zhang, “Design of phosphorene/graphene heterojunctions for high and tunable interfacial thermal conductance.,” Nanoscale. 2018. link Times cited: 31 Abstract: Using density functional theory calculations and molecular d… read moreAbstract: Using density functional theory calculations and molecular dynamics simulations, we systematically explore various possible atomic structures of phosphorene/graphene in-plane heterojunctions and their effects on interfacial thermal conductance (ITC). Unlike the remarkable orientation-dependence of thermal conductivity in pure phosphorene, the ITC is much less orientation-dependent. In addition, the ITC is found to be high, comparable to those of graphene-MoS2 in-plane heterojunctions and chemically-bonded graphene-metal heterojunctions. Moreover, the ITC of armchair heterojunctions abnormally increases with tensile strain, while the zigzag heterojunctions simply follow the normal trend. To gain an in-depth understanding of these interesting observations, we further analyze the atomic topology and phonon vibrational spectrum and examine the nonlinear interfacial coupling in the heat transport, ITC anisotropy, and temperature effect on the ITC. Our findings suggest that phonon anharmonicity plays a critical role in the thermal transport behavior of two-dimensional in-plane heterojunctions. read less NOT USED (low confidence) W. Qiu, J. Shi, Z. Cao, J. Zhang, and N. Wei, “A two-class rotation transmission nanobearing driven by gigahertz rotary nanomotor,” Computational Materials Science. 2018. link Times cited: 10 NOT USED (low confidence) P. Chen, S. Lv, Y. Li, J. Peng, C. Wu, and Y. Yang, “A nanoscale rolling actuator system driven by strain gradient fields,” Computational Materials Science. 2018. link Times cited: 11 NOT USED (low confidence) J. Shi, Y. Li, A. Wang, and K. Cai, “Rotational behavior of a nanoring protected by argon,” Computational Materials Science. 2018. link Times cited: 9 NOT USED (low confidence) Y. Wang, H. Xu, G. Drozdov, and T. Dumitricǎ, “Mesoscopic friction and network morphology control the mechanics and processing of carbon nanotube yarns,” Carbon. 2018. link Times cited: 19 NOT USED (low confidence) M. Veit, S. K. Jain, S. Bonakala, I. Rudra, D. Hohl, and G. Csányi, “Equation of State of Fluid Methane from First Principles with Machine Learning Potentials.,” Journal of chemical theory and computation. 2018. link Times cited: 39 Abstract: The predictive simulation of molecular liquids requires pote… read moreAbstract: The predictive simulation of molecular liquids requires potential energy surface (PES) models that are not only accurate but also computationally efficient enough to handle the large systems and long time scales required for reliable prediction of macroscopic properties. We present a new approach to the systematic approximation of the first-principles PES of molecular liquids using the GAP (Gaussian Approximation Potential) framework. The approach allows us to create potentials at several different levels of accuracy in reproducing the true PES and thus to determine the level of quantum chemistry that is necessary to accurately predict macroscopic properties. We test the approach by building a series of many-body potentials for liquid methane (CH4), which is difficult to model from first principles because its behavior is dominated by weak dispersion interactions with a significant many-body component. The increasing accuracy of the potentials in predicting the bulk density correlates with their fidelity to the true PES, whereas the trend with the empirical potentials tested is surprisingly the opposite. We conclude that an accurate, consistent prediction of its bulk density across wide ranges of temperature and pressure requires not only many-body dispersion but also quantum nuclear effects to be modeled accurately. read less NOT USED (low confidence) X. C. Tang et al., “Strengthening effects of encapsulating graphene in SiC particle-reinforced Al-matrix composites,” Computational Materials Science. 2018. link Times cited: 25 NOT USED (low confidence) B. Morris, M. Becton, and X. Wang, “Mechanical abnormality in graphene-based lamellar superstructures,” Carbon. 2018. link Times cited: 14 NOT USED (low confidence) H. Sun et al., “Theory of thin-film-mediated exfoliation of van der Waals bonded layered materials,” Physical Review Materials. 2018. link Times cited: 11 NOT USED (low confidence) B. Javvaji, P. Budarapu, M. Paggi, X. Zhuang, and T. Rabczuk, “Fracture Properties of Graphene‐Coated Silicon for Photovoltaics,” Advanced Theory and Simulations. 2018. link Times cited: 14 Abstract: The possibility of replacing the conductive gridline deposit… read moreAbstract: The possibility of replacing the conductive gridline deposited on solar cells by highly electrically conductive graphene is opening new perspectives for the future generation of photovoltaics. Besides enhanced electric performance, graphene can also have a role in the resistance of silicon against cracking. Here, the influence of depositing graphene on the silicon surface, on the fracture properties of silicon, is investigated. To pin‐point the influence of graphene, fracture properties estimated from molecular dynamics simulations of three different cases in uniaxial tension are compared. In the first case, the fracture properties of silicon alone are estimated in relation to different initial defect sizes. Second, the same simulations are repeated by depositing graphene on the silicon surface. Atomic interactions in the composite structure are modeled using the combined adaptive inter‐molecular reactive empirical bond order (AIREBO) and Tersoff potential functions. Improvement of about 780% in the Young's modulus of silicon is achieved after coating with graphene. Furthermore, to study the influence of realistic initial defects in graphene, a third set of simulations is considered by repeating the previous tests but with initial cracks through graphene and silicon. Predictions show that graphene can be highly beneficial in strengthening and repairing micro‐cracked silicon to decrease electrical power losses caused by cracks. read less NOT USED (low confidence) X.-K. Chen, J. Liu, Z.-X. Xie, Y. Zhang, Y.-xiang Deng, and K. Chen, “A local resonance mechanism for thermal rectification in pristine/branched graphene nanoribbon junctions,” Applied Physics Letters. 2018. link Times cited: 67 Abstract: Using non-equilibrium molecular dynamics simulations, we inv… read moreAbstract: Using non-equilibrium molecular dynamics simulations, we investigate thermal rectification (TR) in pristine/branched graphene nanoribbon (GNR) junctions. The results indicate that the TR ratio of such junctions can reach 470% under small temperature bias, which has distinct superiority over asymmetric GNR and many other junctions. Moreover, the TR ratio decreases rapidly as the applied temperature bias increases. It seems to be against common sense that the TR ratio generally increases with temperature bias. Phonon spectra analyses reveal that the observed phenomena stem from the local resonance of longitudinal phonons in branched GNR region under negative temperature bias. Furthermore, the influence of ambient temperature, system length, branch number, and defect density is studied to obtain the optimum conditions for TR. This work extends local resonance mechanism to GNR for thermal signal manipulation.Using non-equilibrium molecular dynamics simulations, we investigate thermal rectification (TR) in pristine/branched graphene nanoribbon (GNR) junctions. The results indicate that the TR ratio of such junctions can reach 470% under small temperature bias, which has distinct superiority over asymmetric GNR and many other junctions. Moreover, the TR ratio decreases rapidly as the applied temperature bias increases. It seems to be against common sense that the TR ratio generally increases with temperature bias. Phonon spectra analyses reveal that the observed phenomena stem from the local resonance of longitudinal phonons in branched GNR region under negative temperature bias. Furthermore, the influence of ambient temperature, system length, branch number, and defect density is studied to obtain the optimum conditions for TR. This work extends local resonance mechanism to GNR for thermal signal manipulation. read less NOT USED (low confidence) A. Vakis et al., “Modeling and simulation in tribology across scales: An overview,” Tribology International. 2018. link Times cited: 351 NOT USED (low confidence) S. Nakarmi, V. Unnikrishnan, V. Varshney, and A. Roy, “Computer-aided design of three terminal (3T-) zig-zag SWCNT junctions and nanotube architectures,” Composites Science and Technology. 2018. link Times cited: 2 NOT USED (low confidence) S. E. Muller, R. R. Santhapuram, and A. Nair, “Failure mechanisms in pre-cracked Ni-graphene nanocomposites,” Computational Materials Science. 2018. link Times cited: 19 NOT USED (low confidence) J. Harrison, J. Schall, S. Maskey, P. Mikulski, M. T. Knippenberg, and B. Morrow, “Review of force fields and intermolecular potentials used in atomistic computational materials research,” Applied Physics Reviews. 2018. link Times cited: 99 Abstract: Molecular simulation is a powerful computational tool for a … read moreAbstract: Molecular simulation is a powerful computational tool for a broad range of applications including the examination of materials properties and accelerating drug discovery. At the heart of molecular simulation is the analytic potential energy function. These functions span the range of complexity from very simple functions used to model generic phenomena to complex functions designed to model chemical reactions. The complexity of the mathematical function impacts the computational speed and is typically linked to the accuracy of the results obtained from simulations that utilize the function. One approach to improving accuracy is to simply add more parameters and additional complexity to the analytic function. This approach is typically used in non-reactive force fields where the functional form is not derived from quantum mechanical principles. The form of other types of potentials, such as the bond-order potentials, is based on quantum mechanics and has led to varying levels of accuracy and transferability. When selecting a potential energy function for use in molecular simulations, the accuracy, transferability, and computational speed must all be considered. In this focused review, some of the more commonly used potential energy functions for molecular simulations are reviewed with an eye toward presenting their general forms, strengths, and weaknesses.Molecular simulation is a powerful computational tool for a broad range of applications including the examination of materials properties and accelerating drug discovery. At the heart of molecular simulation is the analytic potential energy function. These functions span the range of complexity from very simple functions used to model generic phenomena to complex functions designed to model chemical reactions. The complexity of the mathematical function impacts the computational speed and is typically linked to the accuracy of the results obtained from simulations that utilize the function. One approach to improving accuracy is to simply add more parameters and additional complexity to the analytic function. This approach is typically used in non-reactive force fields where the functional form is not derived from quantum mechanical principles. The form of other types of potentials, such as the bond-order potentials, is based on quantum mechanics and has led to varying levels of accuracy and transferabilit... read less NOT USED (low confidence) J. Wu et al., “Nature-inspired entwined coiled carbon mechanical metamaterials: molecular dynamics simulations.,” Nanoscale. 2018. link Times cited: 32 Abstract: Entwining-induced robust natural biosystems show superior me… read moreAbstract: Entwining-induced robust natural biosystems show superior mechanical performances over their counterparts. However, the role played by topological entwinement in the mechanical properties of artificial nanohelixes remains unknown. Here, the tensile characteristics of nano-entwined carbon nanocoil (ECNC) metamaterials are explored by atomistic simulations. The simulation results show that ECNCs exhibit heterogeneous pre-stress distribution along the spiral surfaces. The predicted stretching stress-strain responses correlate with the topological nano-entwining and dimensionality. Topological analysis reveals that the collective stretching of the bond and bond angle on the inner hexagon edge of the coils characterizes both early and final elastic extensions, whereas the intermediate elasticity is exclusively attributed to the inner-edged hexagon-angular deformation. The ECNCs impart pronounced tensile stiffnesses to the native structures, surprisingly with a maximum of over 13-fold higher stiffness for one triple-helix, beyond the scalability of mechanical springs in parallel, originating from the nano-entwining mechanism and increase in bulkiness. However, the reinforcement in strengths is restricted by the elastic strain limits that are degraded in ECNCs owing to the steric hindrance effect. All metastructures show superelongation-at-break due to a successive break-vs.-arrest process. Upon plastic deformation, the localized reduction in the radii of ECNCs leads to the formation of carbyne-based networks. read less NOT USED (low confidence) P. Z. Hanakata, E. D. Cubuk, D. Campbell, and H. S. Park, “Accelerated Search and Design of Stretchable Graphene Kirigami Using Machine Learning.,” Physical review letters. 2018. link Times cited: 90 Abstract: Making kirigami-inspired cuts into a sheet has been shown to… read moreAbstract: Making kirigami-inspired cuts into a sheet has been shown to be an effective way of designing stretchable materials with metamorphic properties where the 2D shape can transform into complex 3D shapes. However, finding the optimal solutions is not straightforward as the number of possible cutting patterns grows exponentially with system size. Here, we report on how machine learning (ML) can be used to approximate the target properties, such as yield stress and yield strain, as a function of cutting pattern. Our approach enables the rapid discovery of kirigami designs that yield extreme stretchability as verified by molecular dynamics (MD) simulations. We find that convolutional neural networks, commonly used for classification in vision tasks, can be applied for regression to achieve an accuracy close to the precision of the MD simulations. This approach can then be used to search for optimal designs that maximize elastic stretchability with only 1000 training samples in a large design space of ∼4×10^{6} candidate designs. This example demonstrates the power and potential of ML in finding optimal kirigami designs at a fraction of iterations that would be required of a purely MD or experiment-based approach, where no prior knowledge of the governing physics is known or available. read less NOT USED (low confidence) Q. Zhang, Y. Zhao, X. Ma, Y. Zhao, and X. Pang, “Study on bonding mechanism of graphene on silicon substrate,” Modern Physics Letters B. 2018. link Times cited: 1 Abstract: The study of bonding mechanism is important for the applicat… read moreAbstract: The study of bonding mechanism is important for the application of graphene in micro-electro-mechanical system (MEMS). Using molecular dynamics (MD) simulation, the adhesion behavior of graphene on silicon substrate was observed, by applying a constant vertical upward exfoliation velocity to graphene. The effects of silicon substrate size, graphene layer number and exfoliation velocity on adhesion properties of graphene were studied. The minimum velocity to exfoliate monolayer graphene was 4.3 Å/ps, and the maximum adhesive force was 25.04 nN. For two-layer graphene, velocity was applied on the top layer, 5.2 Å/ps and 12 Å/ps were the critical velocities: when the velocity was no more than 5.2 Å/ps, the top layer cannot be exfoliated; as the velocity was in the range of 5.2–12 Å/ps, the second layer was driven upward together with the top layer, because of interlayer interaction between graphene layers; when the velocity increased greater than 12 Å/ps, the top layer graphene was broken through the bonding forces of substrate and the second layer, and exfoliated alone. It can be concluded that the velocity to exfoliate graphene was extremely high, and the adhesion energy was 299.81 mJ/m2 and 323.41 mJ/m2 for exfoliating monolayer and two-layer graphene respectively, thus the adhesive strength between graphene and silicon was very strong. read less NOT USED (low confidence) M. Chen, A. Muniz, and D. Maroudas, “Formation and Mechanical Behavior of Nanocomposite Superstructures from Interlayer Bonding in Twisted Bilayer Graphene.,” ACS applied materials & interfaces. 2018. link Times cited: 31 Abstract: We report a comprehensive study on the design of two-dimensi… read moreAbstract: We report a comprehensive study on the design of two-dimensional graphene-diamond nanocomposite superstructures formed through interlayer covalent bonding of twisted bilayer graphene with commensurate bilayers. The interlayer bonding is induced by patterned hydrogenation that leads to the formation of superlattices of two-dimensional nanodiamond domains embedded between the two graphene layers. We generalize a rigorous algorithm for the formation of all possible classes of these superstructures: the structural parameters employed to design such carbon nanocomposites include the commensurate bilayer's twist angle, the stacking type of the nanodomains where the interlayer bonds are formed, the interlayer bond pattern, and the interlayer C-C bond density that is proportional to the concentration of sp3-hybridized interlayer-bonded C atoms. We also analyze systematically the mechanical behavior of these nanocomposite superstructures on the basis of molecular-dynamics simulations of uniaxial tensile straining tests according to a reliable interatomic bond-order potential. We identify a range of structural parameters over which the fracture of these superstructures is ductile, mediated by void formation, growth, and coalescence, contrary to the typical brittle fracture of graphene. We introduce a ductility metric as an order parameter for the brittle-to-ductile transition, demonstrate its direct dependence on the fraction of sp3-hybridized interlayer-bonded C atoms, and show that increasing the fraction of interlayer-bonded C atoms beyond a critical level in certain classes of these superstructures induces their ductile mechanical response. read less NOT USED (low confidence) H. Xu, J. Al-Ghalith, and T. Dumitricǎ, “Smooth sliding and superlubricity in the nanofriction of collapsed carbon nanotubes,” Carbon. 2018. link Times cited: 26 NOT USED (low confidence) Y. Liu et al., “Solder-free electrical Joule welding of macroscopic graphene assemblies,” Materials Today Nano. 2018. link Times cited: 22 NOT USED (low confidence) Y. Ma, Z. Zhang, J. Chen, K. Sääskilahti, S. Volz, and J. Chen, “Ordered water layers by interfacial charge decoration leading to an ultra-low Kapitza resistance between graphene and water,” Carbon. 2018. link Times cited: 67 NOT USED (low confidence) E. Hacopian et al., “Toughening Graphene by Integrating Carbon Nanotubes.,” ACS nano. 2018. link Times cited: 48 Abstract: Perfect graphene is believed to be one of the strongest mate… read moreAbstract: Perfect graphene is believed to be one of the strongest materials, yet its resistance to fracture is much less impressive. The modest fracture toughness is thought to be related to the general brittle nature in the fracture process of graphene and its two-dimensional (2D) analogous. The brittleness also makes it extremely difficult to assess mechanical properties of 2D materials. The introduction of carbon nanotubes (CNTs) into bulk materials has proven to be a widely accepted method for toughening and strengthening materials. To date, such toughening effect of CNTs on 2D materials is largely unknown. A unique material, rebar graphene, has been synthesized that consists of CNTs embedded in graphene. In this study, by implementing a "dry" transfer technique, the freely suspended rebar graphene was systematically tested under uniaxial tension mode inside a scanning electron microscope. Our combined experiments and molecular dynamics simulations confirm that the embedded CNTs divert and bridge the propagating crack and provide a toughening mechanism for the material. Our work identifies a promising extrinsic toughening strategy for 2D materials and provides mechanistic insights into the fracture process of graphene hybrid material. read less NOT USED (low confidence) Q. Liu and B. Xu, “Two- and three-dimensional self-folding of free-standing graphene by liquid evaporation.,” Soft matter. 2018. link Times cited: 12 Abstract: Two-dimensional (2-D) atomically thin graphene has exhibited… read moreAbstract: Two-dimensional (2-D) atomically thin graphene has exhibited overwhelming excellent properties over its bulk counterpart graphite, yet the broad applications and explorations of its unprecedented properties require a diversity of its geometric morphologies, beyond its inherently planar structures. In this study, we present a self-folding approach for converting 2-D planar free-standing graphene to 2-D and 3-D folded structures through the evaporation of its liquid solutions. This approach involves competition between the surface energy of the liquid, and the deformation energy and van der Waals energy of graphene. An energy-based theoretical model is developed to describe the self-folding process during liquid evaporation by incorporating both graphene dimensions and surface wettability. The critical elastocapillary length by liquid evaporation is extracted and exemplified by investigating three typical graphene geometries with rectangular, circular and triangular shapes. After the complete evaporation of the liquid, the critical self-folding length of graphene that can enable a stable folded pattern by van der Waals energy is also obtained. In parallel, full-scale molecular dynamics (MD) simulations are performed to monitor the evolution of deformation energies and folded patterns with liquid evaporation. The simulation results demonstrate the formation of 2-D folded racket-like and 3-D folded cone-like patterns and show remarkable agreement with theoretical predictions in both energy variations and folded patterns. This work offers quantitative guidance for controlling the self-folding of graphene and other 2-D materials into complex structures by liquid evaporation. read less NOT USED (low confidence) W. Deng, L. Li, Y. Hu, X. Wang, and X. B. Li, “Thermoelastic damping of graphene nanobeams by considering the size effects of nanostructure and heat conduction,” Journal of Thermal Stresses. 2018. link Times cited: 44 Abstract: Thermoelastic damping of nanobeams by considering the size e… read moreAbstract: Thermoelastic damping of nanobeams by considering the size effects of nanostructure and heat conduction is studied herein. The size effect of nanostructure is investigated based on Euler–Bernoulli beam assumptions in the framework of nonlocal strain gradient elasticity, and the size dependence of heat conduction is taken into account by incorporating phase-lagging and nonlocal effects. Closed-form solutions of thermoelastic damping and quality factor characterized by thermoelastic coupling are derived. Graphene nanoribbon is chosen as a nanobeam. The effects of relaxation time, aspect ratio, elastic modulus, thermal expansion, and thermal conductivity on quality factor of graphene nanobeams are discussed in detail. read less NOT USED (low confidence) H. G. Kalashami, M. Neek‐Amal, and F. Peeters, “Slippage dynamics of confined water in graphene oxide capillaries,” Physical Review Materials. 2018. link Times cited: 5 NOT USED (low confidence) S. Hu et al., “Randomness-Induced Phonon Localization in Graphene Heat Conduction.,” The journal of physical chemistry letters. 2018. link Times cited: 90 Abstract: Through nonequilibrium molecular dynamics simulations, we re… read moreAbstract: Through nonequilibrium molecular dynamics simulations, we report the direct numerical evidence of the coherent phonons participating in thermal transport at room temperature in graphene phononic crystal (GPnC) structure and evaluate their contribution to thermal conductivity based on the two-phonon model. With decreasing period length in GPnC, the transition from the incoherent to coherent phonon transport is clearly observed. When a random perturbation to the positions of holes is introduced in a graphene sheet, the phonon wave-packet simulation reveals the presence of notable localization of coherent phonons, leading to the significant reduction of thermal conductivity and suppressed length dependence. Finally, the effects of period length and temperature on the coherent phonon contribution to thermal conductivity are also discussed. Our work establishes a deep understanding of the coherent phonons transport behavior in periodic phononic structures, which provides effective guidance for engineering thermal transport based on a new path via phonon localization. read less NOT USED (low confidence) J.-X. Shi, K. Ohmura, M. Shimoda, and X. Lei, “A consistent methodology for optimal shape design of graphene sheets to maximize their fundamental frequencies considering topological defects,” Journal of the Mechanics and Physics of Solids. 2018. link Times cited: 9 NOT USED (low confidence) S. M. Rahimian-Koloor, S. M. Hashemianzadeh, and M. Shokrieh, “Effect of CNT structural defects on the mechanical properties of CNT/Epoxy nanocomposite,” Physica B: Condensed Matter. 2018. link Times cited: 31 NOT USED (low confidence) B. Faria, C. Guarda, N. Silvestre, J. Lopes, and D. Galhofo, “Strength and failure mechanisms of cnt-reinforced copper nanocomposite,” Composites Part B: Engineering. 2018. link Times cited: 40 NOT USED (low confidence) J. Wu, H. Zhao, J. Liu, Z. Zhang, F. Ning, and Y. Liu, “Nanotube-chirality-controlled tensile characteristics in coiled carbon metastructures,” Carbon. 2018. link Times cited: 34 NOT USED (low confidence) Y. Ma et al., “Extended Hencky solution for the blister test of nanomembrane,” Extreme Mechanics Letters. 2018. link Times cited: 17 NOT USED (low confidence) G. Jung and M. Buehler, “Multiscale Mechanics of Triply Periodic Minimal Surfaces of Three-Dimensional Graphene Foams.,” Nano letters. 2018. link Times cited: 58 Abstract: The mechanics of triply periodic minimal surfaces (TPMSs) wi… read moreAbstract: The mechanics of triply periodic minimal surfaces (TPMSs) with three-dimensional (3D) graphene foams are systematically studied to understand the effects of structure and size on the mechanical properties, for example, elasticity, strength, and fracture. The design of lightweight open-shell porous solid materials with TPMSs has shown excellent and tunable load-bearing properties. However, fracture properties and their relations with surface topologies are largely unknown. Utilizing reactive molecular dynamics simulations, here we investigate the elastic and fracture properties of three different surface topologies with 3D graphene foams: P (primitive), D (diamond), and G (gyroid), called Schwarzites. Models with different lattice sizes are utilized to derive power laws, which can connect the properties along different sizes to shed light on the multiscale mechanics of TPMSs. Our study provides a systematic understanding of the relation between TPMS topologies and their mechanical properties, including failure mechanisms of graphene foams, opening opportunities to explore designable structures with tailored properties. read less NOT USED (low confidence) S. Wang, C. Wang, Z. Peng, and S. Chen, “A new technique for nanoparticle transport and its application in a novel nano-sieve,” Scientific Reports. 2018. link Times cited: 8 NOT USED (low confidence) A. Nobakht, S. Shin, and J. Wang, “Asymmetric Thermal Transport by Adjusting Structural Defects,” 2018 Joint Thermophysics and Heat Transfer Conference. 2018. link Times cited: 0 NOT USED (low confidence) Y. Wei and R. Yang, “Nanomechanics of graphene,” National Science Review. 2018. link Times cited: 70 Abstract: The super-high strength of single-layer graphene has attract… read moreAbstract: The super-high strength of single-layer graphene has attracted great interest. In practice, defects resulting from thermodynamics or introduced by fabrication, naturally or artificially, play a pivotal role in the mechanical behaviors of graphene. More importantly, high strength is just one aspect of the magnificent mechanical properties of graphene: its atomic-thin geometry not only leads to ultra-low bending rigidity, but also brings in many other unique properties of graphene in terms of mechanics in contrast to other carbon allotropes, including fullerenes and carbon nanotubes. The out-of-plane deformation is of a ‘soft’ nature, which gives rise to rich morphology and is crucial for morphology control. In this review article, we aim to summarize current theoretical advances in describing the mechanics of defects in graphene and the theory to capture the out-of-plane deformation. The structure–mechanical property relationship in graphene, in terms of its elasticity, strength, bending and wrinkling, with or without the influence of imperfections, is presented. read less NOT USED (low confidence) D. Yi et al., “What Drives Metal-Surface Step Bunching in Graphene Chemical Vapor Deposition?,” Physical review letters. 2018. link Times cited: 35 Abstract: Compressive strain relaxation of a chemical vapor deposition… read moreAbstract: Compressive strain relaxation of a chemical vapor deposition (CVD) grown graphene overlayer has been considered to be the main driving force behind metal surface step bunching (SB) in CVD graphene growth. Here, by combining theoretical studies with experimental observations, we prove that the SB can occur even in the absence of a compressive strain, is enabled by the rapid diffusion of metal adatoms beneath the graphene and is driven by the release of the bending energy of the graphene overlayer in the vicinity of steps. Based on this new understanding, we explain a number of experimental observations such as the temperature dependence of SB, and how SB depends on the thickness of the graphene film. This study also shows that SB is a general phenomenon that can occur in all substrates covered by films of two-dimensional (2D) materials. read less NOT USED (low confidence) S. K. Jalali, “Does vibration amplitude influence the evaluation of nonlocal small scale parameter of single layered graphene sheets?,” Mechanics of Advanced Materials and Structures. 2018. link Times cited: 6 Abstract: ABSTRACT This study aims to evaluate the nonlocal small scal… read moreAbstract: ABSTRACT This study aims to evaluate the nonlocal small scale parameter for large amplitude vibration of single layered graphene sheets (SLGSs) comparing nonlinear resonant frequencies obtained via nonlocal continuum and molecular dynamics (MD) simulations. Nonlinear governing equations of motion are numerically solved employing the pseudo-spectral method to obtain the frequency response. Results reveal that the calibrated small scale parameter decreases when the vibration amplitude increases. Also, from MD simulations it is seen that for all length sizes after an ultimate vibration amplitude around 31% length size, the graphene sheets start to fracture. read less NOT USED (low confidence) J. Guo et al., “Investigation of thermal property of triangle vacancy nitrogen-doping graphene nanoribbons,” Composite Interfaces. 2018. link Times cited: 9 Abstract: ABSTRACT Under different ratios of nitrogen atoms at 200 ~ 6… read moreAbstract: ABSTRACT Under different ratios of nitrogen atoms at 200 ~ 600K temperature range, we study thermal conductivity and heat rectification of NTGNs (Nitrogen-doping beside Triangle vacancy Graphene Nanoribbons) by using reverse non-equilibrium molecular dynamics simulation. The graphene nanoribbons are armchair graphene nanoribbons (AGNRs), and the length and width are 19.3nm and 3.7nm respectively. We find that thermal conductivity increases more than 30 when nitrogen atoms first replace 12 carbon atoms beside vacancy defect. Then as the proportion of nitrogen atoms increases from 0.85% to 7.2%, the thermal conductivity gradually decreases. Besides, the thermal conductivity of NTGNs becomes more and more insensitive to temperature with the increase of concentration of nitrogen atoms. In addition, we find that heat flow from left (L) to right (R) flows easily and the thermal rectification has a rising trend with the increase in the scale of nitrogen atoms at different temperatures. Moreover, phonon power spectra of the atoms are calculated to explain thermal rectification phenomenon. These findings will make a greater contribution to the design of heat transfer controlling and thermal rectifier. read less NOT USED (low confidence) Q. Xiong, Z. Sha, Q. Pei, T. Kitamura, and Z.-huan Li, “Thermal damage and ablation behavior of graphene induced by ultrafast laser irradiation,” Journal of Thermal Stresses. 2018. link Times cited: 7 Abstract: Ultrafast laser-induced damage and ablation of graphene is t… read moreAbstract: Ultrafast laser-induced damage and ablation of graphene is the one of the most critical parts of precise nanopatterning of graphene by using laser ablation. In this article, we have studied the local damage and ablation behavior of monolayer graphene irradiated by femtosecond single pulse laser using molecular dynamics simulation. A theoretical model of phonon-dominated absorption of laser energy is proposed to describe the interaction between graphene and femtosecond single pulse laser. The simulation results based on this model are quantitatively consistent with experimental and theoretical ones. Furthermore, the effects of laser fluences on the atomic ablation behavior and nanogroove generation are investigated. The results show that the relationship between depth of the induced ablation and laser fluence follows a logarithmic function instead of a simple linear relationship. These results will be useful in providing guidance in femtosecond laser processing of graphene. read less NOT USED (low confidence) A. Y. Nobakht et al., “Thermal rectification via asymmetric structural defects in graphene,” Carbon. 2018. link Times cited: 33 NOT USED (low confidence) Y. Sun, L. Chen, L. Cui, Y. Zhang, and X. Du, “Molecular dynamics simulation of the effect of oxygen-containing functional groups on the thermal conductivity of reduced graphene oxide,” Computational Materials Science. 2018. link Times cited: 26 NOT USED (low confidence) G. Kupgan, L. Abbott, K. E. Hart, and C. Colina, “Modeling Amorphous Microporous Polymers for CO2 Capture and Separations.,” Chemical reviews. 2018. link Times cited: 181 Abstract: This review concentrates on the advances of atomistic molecu… read moreAbstract: This review concentrates on the advances of atomistic molecular simulations to design and evaluate amorphous microporous polymeric materials for CO2 capture and separations. A description of atomistic molecular simulations is provided, including simulation techniques, structural generation approaches, relaxation and equilibration methodologies, and considerations needed for validation of simulated samples. The review provides general guidelines and a comprehensive update of the recent literature (since 2007) to promote the acceleration of the discovery and screening of amorphous microporous polymers for CO2 capture and separation processes. read less NOT USED (low confidence) D. Lin et al., “Shock engineering the additive manufactured graphene-metal nanocomposite with high density nanotwins and dislocations for ultra-stable mechanical properties,” Acta Materialia. 2018. link Times cited: 69 NOT USED (low confidence) A. Torres-Knoop, I. Kryven, V. Schamboeck, and P. Iedema, “Modeling the free-radical polymerization of hexanediol diacrylate (HDDA): a molecular dynamics and graph theory approach.,” Soft matter. 2018. link Times cited: 32 Abstract: In the printing, coating and ink industries, photocurable sy… read moreAbstract: In the printing, coating and ink industries, photocurable systems are becoming increasingly popular and multi-functional acrylates are one of the most commonly used monomers due to their high reactivity (fast curing). In this paper, we use molecular dynamics and graph theory tools to investigate the thermo-mechanical properties and topology of hexanediol diacrylate (HDDA) polymer networks. The gel point was determined as the point where a giant component was formed. For the conditions of our simulations, we found the gel point to be around 0.18 bond conversion. A detailed analysis of the network topology showed, unexpectedly, that the flexibility of the HDDA molecules plays an important role in increasing the conversion of double bonds, while delaying the gel point. This is due to a back-biting type of reaction mechanism that promotes the formation of small cycles. The glass transition temperature for several degrees of curing was obtained from the change in the thermal expansion coefficient. For a bond conversion close to experimental values we obtained a glass transition temperature around 400 K. For the same bond conversion we estimate a Young's modulus of 3 GPa. Both of these values are in good agreement with experiments. read less NOT USED (low confidence) Z. Zhou, Y. Li, J. Fan, D. Rong, G. Sui, and C. Xu, “Exact vibration analysis of a double-nanobeam-systems embedded in an elastic medium by a Hamiltonian-based method,” Physica E-low-dimensional Systems & Nanostructures. 2018. link Times cited: 16 NOT USED (low confidence) J. Zhang, “Effects of cell irregularity on the thermal conductivity of carbon honeycombs,” Carbon. 2018. link Times cited: 16 NOT USED (low confidence) S. M. Rahimian-Koloor, H. Moshrefzadeh-Sani, S. M. Hashemianzadeh, and M. Shokrieh, “The effective stiffness of an embedded graphene in a polymeric matrix,” Current Applied Physics. 2018. link Times cited: 23 NOT USED (low confidence) C. Zhang, A. Akbarzadeh, W. Kang, J. Wang, and A. Mirabolghasemi, “Nano-architected metamaterials: Carbon nanotube-based nanotrusses,” Carbon. 2018. link Times cited: 28 NOT USED (low confidence) J. Yeo et al., “Multiscale modeling of keratin, collagen, elastin and related human diseases: Perspectives from atomistic to coarse-grained molecular dynamics simulations.,” Extreme Mechanics Letters. 2018. link Times cited: 30 NOT USED (low confidence) X. Zhao et al., “Breaking the Current‐Retention Dilemma in Cation‐Based Resistive Switching Devices Utilizing Graphene with Controlled Defects,” Advanced Materials. 2018. link Times cited: 179 Abstract: Cation‐based resistive switching (RS) devices, dominated by … read moreAbstract: Cation‐based resistive switching (RS) devices, dominated by conductive filaments (CF) formation/dissolution, are widely considered for the ultrahigh density nonvolatile memory application. However, the current‐retention dilemma that the CF stability deteriorates greatly with decreasing compliance current makes it hard to decrease operating current for memory application and increase driving current for selector application. By centralizing/decentralizing the CF distribution, this current‐retention dilemma of cation‐based RS devices is broken for the first time. Utilizing the graphene impermeability, the cation injecting path to the RS layer can be well modulated by structure‐defective graphene, leading to control of the CF quantity and size. By graphene defect engineering, a low operating current (≈1 µA) memory and a high driving current (≈1 mA) selector are successfully realized in the same material system. Based on systematically materials analysis, the diameter of CF, modulated by graphene defect size, is the major factor for CF stability. Breakthrough in addressing the current‐retention dilemma will instruct the future implementation of high‐density 3D integration of RS memory immune to crosstalk issues. read less NOT USED (low confidence) J. Lei and Z. Liu, “The structural and mechanical properties of graphene aerogels based on Schwarz-surface-like graphene models,” Carbon. 2018. link Times cited: 28 NOT USED (low confidence) H. Dong, Z. Wang, T. C. O’Connor, A. Azoug, M. Robbins, and T. Nguyen, “Micromechanical models for the stiffness and strength of UHMWPE macrofibrils,” Journal of the Mechanics and Physics of Solids. 2018. link Times cited: 15 NOT USED (low confidence) M. Liao, Q. To, C. Léonard, and V. monchiet, “Non-parametric wall model and methods of identifying boundary conditions for moments in gas flow equations,” Physics of Fluids. 2018. link Times cited: 10 Abstract: In this paper, we use Molecular Dynamics (MD) simulation met… read moreAbstract: In this paper, we use Molecular Dynamics (MD) simulation method to study gas-wall boundary conditions. Discrete scattering information of gas molecules at the wall surface are obtained from collision simulations. The collision data can be used to identify the accommodation coefficients for parametric wall models such as Maxwell, Cercignani-Lampis scattering kernels. Since these scattering kernels are based on a limited number of accommodation coefficients, we adopt non-parametric statistical methods to construct the kernel to overcome these issues. Different from parametric kernels, the non-parametric kernels require no parameter (i.e accommodation coefficients) and no predefined distribution. We also propose approaches to derive directly the Navier friction and Kapitza thermal resistance coefficients as well as other interface coefficients associated to moment equations from the non-parametric kernels. The methods are applied successfully to systems composed of CH 4 or CO 2 and graphite, which are of interest to the petroleum industry. read less NOT USED (low confidence) M. Tschopp, B. Rinderspacher, S. Nouranian, M. Baskes, S. Gwaltney, and M. Horstemeyer, “Quantifying Parameter Sensitivity and Uncertainty for Interatomic Potential Design: Application to Saturated Hydrocarbons,” ASCE-ASME Journal of Risk and Uncertainty in Engineering Systems, Part B: Mechanical Engineering. 2018. link Times cited: 8 NOT USED (low confidence) J. Goclon, T. Panczyk, and K. Winkler, “Investigation of the interfacial properties of polyurethane/carbon nanotube hybrid composites: A molecular dynamics study,” Applied Surface Science. 2018. link Times cited: 18 NOT USED (low confidence) R. A. Bernal, P. Chen, J. Schall, J. Harrison, Y. Jeng, and R. Carpick, “Influence of chemical bonding on the variability of diamond-like carbon nanoscale adhesion,” Carbon. 2018. link Times cited: 37 NOT USED (low confidence) K. Cai, J. Shi, J.-zhou Yu, and Q. Qin, “Dynamic behavior of a rotary nanomotor in argon environments,” Scientific Reports. 2018. link Times cited: 13 NOT USED (low confidence) H. Zhang and T. Chang, “Edge orientation dependent nanoscale friction.,” Nanoscale. 2018. link Times cited: 22 Abstract: Nanoscale friction is generally found to be a function of th… read moreAbstract: Nanoscale friction is generally found to be a function of the contact area. However, little is known whether and how it is dependent on the contact area shape. In this study, based on molecular dynamics (MD) simulations about a rectangular graphene flake sliding on a diamond-supported graphene substrate, we show that the friction between the flake and the substrate is significantly dependent on the flake edge oriented perpendicular to the sliding direction, but less dependent on the edge along the sliding direction. As a result, the friction between the flake and the substrate is closely related to the aspect ratio of the flake. We propose a novel nanoscale friction formula for the translational motion of a rectangular slider. The simulation data fit the formula well and the effect of the aspect ratio on nanoscale friction can thus be efficiently captured. We discuss also the origin of the edge orientation dependent nanoscale friction. The present findings provide not only a preliminary evaluation of the contact area shape dependent nanoscale friction, but also a quite important guide for modeling the friction properties of nanodevices based on two-dimensional (2D) materials. read less NOT USED (low confidence) A. Raj, A. Mokhalingam, and S. Gupta, “Instabilities in carbon nanocone stacks,” Carbon. 2018. link Times cited: 4 NOT USED (low confidence) J. Huang and Q. Han, “Strain effects on rotational property in nanoscale rotation system,” Scientific Reports. 2018. link Times cited: 9 NOT USED (low confidence) B. Deng et al., “Wrinkle-Free Single-Crystal Graphene Wafer Grown on Strain-Engineered Substrates.,” ACS nano. 2017. link Times cited: 154 Abstract: Wrinkles are ubiquitous for graphene films grown on various … read moreAbstract: Wrinkles are ubiquitous for graphene films grown on various substrates by chemical vapor deposition at high temperature due to the strain induced by thermal mismatch between the graphene and substrates, which greatly degrades the extraordinary properties of graphene. Here we show that the wrinkle formation of graphene grown on Cu substrates is strongly dependent on the crystallographic orientations. Wrinkle-free single-crystal graphene was grown on a wafer-scale twin-boundary-free single-crystal Cu(111) thin film fabricated on sapphire substrate through strain engineering. The wrinkle-free feature of graphene originated from the relatively small thermal expansion of the Cu(111) thin film substrate and the relatively strong interfacial coupling between Cu(111) and graphene, based on the strain analyses as well as molecular dynamics simulations. Moreover, we demonstrated the transfer of an ultraflat graphene film onto target substrates from the reusable single-crystal Cu(111)/sapphire growth substrate. The wrinkle-free graphene shows enhanced electrical mobility compared to graphene with wrinkles. read less NOT USED (low confidence) T. Burczynski, A. Mrózek, and W. Kuś, “COMPUTATIONAL INTELLIGENT DESIGN OF 2D NANOSTRUCTURES BASED ON CARBON.” 2017. link Times cited: 0 Abstract: The paper describes an application of the hybrid intelligent… read moreAbstract: The paper describes an application of the hybrid intelligent algorithm to optimal searching for new, stable atomic arrangements of 2D graphene-like carbon lattices. The proposed approach combines the parallel evolutionary algorithm and the conjugated-gradient optimization technique. The main goal is to find stable arrangements of carbon atoms under certain imposed conditions such as density, shape and size of the unit cell and also predefined mechanical properties. The nanostructure is considered a discrete atomic model and interactions between atoms are modeled using the AIREBO potential, especially developed for carbon. The parallel approach is used in computations. Validation of the obtained results and examples of new models of the new grapheme-like materials are presented. read less NOT USED (low confidence) X. Shi, X. He, L. Wang, and L. Sun, “Hierarchical-structure induced adjustable deformation of super carbon nanotubes with radial shrinkage up to 66%,” Carbon. 2017. link Times cited: 9 NOT USED (low confidence) X. Liu et al., “Toward the multiscale nature of stress corrosion cracking,” Nuclear Engineering and Technology. 2017. link Times cited: 18 NOT USED (low confidence) A. Sarode, Z. Ahmed, P. Basarkar, A. Bhargav, and D. Banerjee, “A molecular dynamics approach of the role of carbon nanotube diameter on thermal interfacial resistance through vibrational mismatch analysis,” International Journal of Thermal Sciences. 2017. link Times cited: 10 NOT USED (low confidence) M. Maździarz, A. Mrózek, W. Kuś, and T. Burczynski, “First-principles study of new X-graphene and Y-graphene polymorphs generated by the two stage strategy,” Materials Chemistry and Physics. 2017. link Times cited: 14 NOT USED (low confidence) C. Androulidakis, E. Koukaras, M. G. P. Carbone, M. Hadjinicolaou, and C. Galiotis, “Wrinkling formation in simply-supported graphenes under tension and compression loadings.,” Nanoscale. 2017. link Times cited: 24 Abstract: Wrinkles in supported graphenes can be formed either by unia… read moreAbstract: Wrinkles in supported graphenes can be formed either by uniaxial compression or uniaxial tension beyond a certain critical load depending on the mode of loading. In the first case, the wrinkling direction is normal to the compression axis whereas in tension, wrinkles of the same pattern are formed parallel to the loading direction due to Poisson's (lateral) contraction. Herein we show by direct AFM observations that in simply-supported graphenes such instabilities appear as periodic wrinkles over existing stochastic undulations caused by the underlying-substrate-roughness. The critical strain for the generation of these wrinkles in both tension and compression is less than 1% which particularly for the former is far lower than the predicted tensile strain to fracture of suspended graphene estimated at ∼30%. Based on these findings, a constitutive model that provides the critical tensile strain for induced buckling in the lateral direction is proposed that depends only on the graphene-support interaction and not on the nature of the substrate. Understanding the wrinkling failure of graphenes under strain is of paramount importance as it leads to new threshold limits beyond which the physical-mechanical properties of graphene are impaired. read less NOT USED (low confidence) M. Wood and A. Thompson, “Extending the accuracy of the SNAP interatomic potential form.,” The Journal of chemical physics. 2017. link Times cited: 130 Abstract: The Spectral Neighbor Analysis Potential (SNAP) is a classic… read moreAbstract: The Spectral Neighbor Analysis Potential (SNAP) is a classical interatomic potential that expresses the energy of each atom as a linear function of selected bispectrum components of the neighbor atoms. An extension of the SNAP form is proposed that includes quadratic terms in the bispectrum components. The extension is shown to provide a large increase in accuracy relative to the linear form, while incurring only a modest increase in computational cost. The mathematical structure of the quadratic SNAP form is similar to the embedded atom method (EAM), with the SNAP bispectrum components serving as counterparts to the two-body density functions in EAM. The effectiveness of the new form is demonstrated using an extensive set of training data for tantalum structures. Similar to artificial neural network potentials, the quadratic SNAP form requires substantially more training data in order to prevent overfitting. The quality of this new potential form is measured through a robust cross-validation analysis. read less NOT USED (low confidence) Z. Yao, C. Liu, and H. Lv, “The structure and interaction mechanisms of C10H16@(13, 0)SWCNT under high pressure,” International Journal of Modern Physics B. 2017. link Times cited: 2 Abstract: The high-pressure deformation and polymerization of peapod s… read moreAbstract: The high-pressure deformation and polymerization of peapod structure (C10H16 filled into (13, 0) single-walled carbon nanotube) is studied by using density function theory. The guest–host interaction mechanism under pressure is analyzed by combining the van der Waals (vdW) potential with the electron localization function (ELF). Our studies show that the cross-section of the filled single-walled carbon nanotube changes from a circle into an ellipse shape, and then into a walnut shape with the transition pressures of 3 GPa and 10 GPa, respectively. The intertubular bonding of adjacent tubes occurs at 17 GPa, 30 GPa, 32 GPa, 82 GPa and 152 GPa. The attractive and repulsive guest–host interactions are exhibited for the pressures lower and higher than 10 GPa, respectively. Except for the ambient pressure structure, six stable high pressure structures, which can hold their structures when the pressure is released, are identified by combining the systematic binding energy with geometry optimization. read less NOT USED (low confidence) X.-K. Chen, J. Liu, D. Du, and K. Chen, “Anomalous thermal conductance of graphyne under lower temperature,” Journal of Physics: Condensed Matter. 2017. link Times cited: 7 Abstract: The thermal transport properties of graphyne are investigate… read moreAbstract: The thermal transport properties of graphyne are investigated via equilibrium molecular dynamics (EMD) simulations and non-equilibrium Green’s function (NEGF) method. It is found that the room-temperature thermal conductivity of graphyne is 93% lower than that of graphene with a similar size and decreases steeply with increasing the number of acetylenic linkages, which agrees with the results obtained by NEGF method qualitatively. Lattice dynamics calculations reveal that these phenomena can be attributed to the reduction of both phonon group velocities and phonon lifetimes in graphyne at low-frequency region. However, when the temperature is less than 30 K, the thermal conductance of graphyne exceeds that of graphene. Moreover, the anomalous thermal conductance behavior is not sensitive to the system lateral size. The underlying mechanisms for such phenomena are elaborated by the normal mode analysis. read less NOT USED (low confidence) K. Duan, L. Li, Y. Hu, and X. Wang, “Damping characteristic of Ni-coated carbon nanotube/copper composite,” Materials & Design. 2017. link Times cited: 30 NOT USED (low confidence) E. Barani, E. Korznikova, A. Chetverikov, K. Zhou, and S. Dmitriev, “Gap discrete breathers in strained boron nitride,” Physics Letters A. 2017. link Times cited: 42 NOT USED (low confidence) H. Lu et al., “Enhanced thermal conductivity of free-standing 3D hierarchical carbon nanotube-graphene hybrid paper,” Composites Part A-applied Science and Manufacturing. 2017. link Times cited: 63 NOT USED (low confidence) B. R. H. de Aquino, M. Neek‐Amal, and M. Milošević, “Unconventional two-dimensional vibrations of a decorated carbon nanotube under electric field: linking actuation to advanced sensing ability,” Scientific Reports. 2017. link Times cited: 1 NOT USED (low confidence) A. Weerasinghe, A. Ramasubramaniam, and D. Maroudas, “Thermal conductivity of electron-irradiated graphene,” Applied Physics Letters. 2017. link Times cited: 8 Abstract: We report results of a systematic analysis of thermal transp… read moreAbstract: We report results of a systematic analysis of thermal transport in electron-irradiated, including irradiation-induced amorphous, graphene sheets based on nonequilibrium molecular-dynamics simulations. We focus on the dependence of the thermal conductivity, k, of the irradiated graphene sheets on the inserted irradiation defect density, c, as well as the extent of defect passivation with hydrogen atoms. While the thermal conductivity of irradiated graphene decreases precipitously from that of pristine graphene, k0, upon introducing a low vacancy concentration, c < 1%, in the graphene lattice, further reduction of the thermal conductivity with the increasing vacancy concentration exhibits a weaker dependence on c until the amorphization threshold. Beyond the onset of amorphization, the dependence of thermal conductivity on the vacancy concentration becomes significantly weaker, and k practically reaches a plateau value. Throughout the range of c and at all hydrogenation levels examined, the correlation k = ... read less NOT USED (low confidence) J. Shi, K. Cai, L. Liu, and Q. Qin, “Self-assembly of a parallelogram black phosphorus ribbon into a nanotube,” Scientific Reports. 2017. link Times cited: 12 NOT USED (low confidence) T. Maaravi, I. Leven, I. Azuri, L. Kronik, and O. Hod, “Interlayer Potential for Homogeneous Graphene and Hexagonal Boron Nitride Systems: Reparametrization for Many-Body Dispersion Effects,” Journal of Physical Chemistry C. 2017. link Times cited: 55 Abstract: A new parametrization of the anisotropic interlayer potentia… read moreAbstract: A new parametrization of the anisotropic interlayer potential for hexagonal boron nitride (h-BN ILP) is presented. The force-field is benchmarked against density functional theory calculations of several dimer systems within the Heyd-Scuseria-Ernzerhof hybrid density functional approximation, corrected for many-body dispersion effects. The latter, more advanced method for treating dispersion, is known to produce binding energies nearly twice as small as those obtained with pairwise correction schemes, used for an earlier ILP parametrization. The new parametrization yields good agreement with the reference calculations to within ∼1 and ∼0.5 meV/atom for binding and sliding energies, respectively. For completeness, we present a complementary parameter set for homogeneous graphitic systems. Together with our previously suggested ILP parametrization for the heterogeneous graphene/h-BN junction, this provides a powerful tool for consistent simulation of the structural, mechanical, tribological, and heat transp... read less NOT USED (low confidence) Y. Wang and V. Crespi, “NanoVelcro: Theory of Guided Folding in Atomically Thin Sheets with Regions of Complementary Doping.,” Nano letters. 2017. link Times cited: 7 Abstract: Folding has been commonly observed in two-dimensional materi… read moreAbstract: Folding has been commonly observed in two-dimensional materials such as graphene and monolayer transition metal dichalcogenides. Although interlayer coupling stabilizes these folds, it provides no control over the placement of the fold, let alone the final folded shape. Lacking nanoscale "fingers" to externally guide folding, control requires interactions engineered into the sheets that guide them toward a desired final folded structure. Here we provide a theoretical framework for a general methodology toward this end: atomically thin 2D sheets are doped with patterns of complementary n-type and p-type regions whose preferential adhesion favors folding into desired shapes. The two-colorable theorem in flat-foldable origami ensures that arbitrary folding patterns are in principle accessible to this method. This complementary doping method can be combined with nanoscale crumpling (by, for example, passage of 2D sheets through holes) to obtain not only control over fold placements but also the ability to distinguish between degenerate folded states, thus attaining nontrivial shapes inaccessible to sequential folding. read less NOT USED (low confidence) Y. Zhang, Q. Liu, and B. Xu, “Liquid-assisted, etching-free, mechanical peeling of 2D materials,” Extreme Mechanics Letters. 2017. link Times cited: 22 NOT USED (low confidence) M. Kim and S. Im, “A plate model for multilayer graphene sheets and its finite element implementation via corotational formulation,” Computer Methods in Applied Mechanics and Engineering. 2017. link Times cited: 6 NOT USED (low confidence) J. Baimova, R. Murzaev, and A. Rudskoy, “Discrete breathers in graphane in thermal equilibrium,” Physics Letters A. 2017. link Times cited: 21 NOT USED (low confidence) G. Jung, J. Yeo, Z. Tian, Z. Qin, and M. Buehler, “Unusually low and density-insensitive thermal conductivity of three-dimensional gyroid graphene.,” Nanoscale. 2017. link Times cited: 34 Abstract: Graphene has excellent mechanical, thermal and electrical pr… read moreAbstract: Graphene has excellent mechanical, thermal and electrical properties. However, there are limitations in utilizing monolayers of graphene for mechanical engineering applications due to its atomic thickness and lack of bending rigidity. Synthesizing graphene aerogels or foams is one approach to utilize graphene in three-dimensional bulk forms. Recently, graphene with a gyroidal geometry has been proposed. A gyroid is a triply periodic minimal surface that allows graphene sheets to form a three-dimensional structure. Its light weight and high mechanical strength suggests that the graphene that constitutes this geometry can synergistically contribute to the mechanics of the bulk material. However, it is not clear whether gyroid graphene can preserve the high thermal conductivity of pristine graphene sheets. Here, we investigate the thermal conductivities of gyroid graphene with different porosities by using full-atom molecular dynamics simulations. In contrast to its excellent mechanical properties, we find that the thermal conductivity of gyroid graphene is more than 300 times lower than that of pristine graphene, with a bulk density of only about one-third of that of graphene. We derive a scaling law showing that the thermal conductivity does not vary much with different bulk densities, which contrasts the behavior of conventional porous materials. Our analysis shows that the poor thermal conductivity of gyroid graphene can be attributed to defects and curvatures of graphene, which increase with the density, resulting in the reduction of a phonon mean free path by phonon scattering. Our study shows that three-dimensional porous graphene has potential that may be utilized in designing new lightweight structural materials with low and density-insensitive thermal properties and superior mechanical strength. read less NOT USED (low confidence) Y. Zhang, Q. Pei, Y. Cheng, Y. Zhang, and X. Zhang, “Thermal conductivity of penta-graphene: The role of chemical functionalization,” Computational Materials Science. 2017. link Times cited: 29 NOT USED (low confidence) Z. Meng, A. Singh, X. Qin, and S. Keten, “Reduced ballistic limit velocity of graphene membranes due to cone wave reflection,” Extreme Mechanics Letters. 2017. link Times cited: 38 NOT USED (low confidence) H. Huang, X. Tang, F. Chen, J. Liu, and D. Chen, “Role of graphene layers on the radiation resistance of copper–graphene nanocomposite: Inhibiting the expansion of thermal spike,” Journal of Nuclear Materials. 2017. link Times cited: 23 NOT USED (low confidence) B. Javvaji, B. M. Shenoy, D. Mahapatra, A. Ravikumar, G. Hegde, and M. Rizwan, “Stable configurations of graphene on silicon,” Applied Surface Science. 2017. link Times cited: 10 NOT USED (low confidence) Y. Wang and V. Crespi, “Theory of Finite-Length Grain Boundaries of Controlled Misfit Angle in Two-Dimensional Materials.,” Nano letters. 2017. link Times cited: 16 Abstract: Grain boundaries in two-dimensional crystals are usually tho… read moreAbstract: Grain boundaries in two-dimensional crystals are usually thought to separate distinct crystallites and as such they must either form closed loops or terminate at the boundary of a sample. However, when an atomically thin two-dimensional crystal grows on a substrate of nonzero Gaussian curvature, it can develop finite-length grain boundaries that terminate abruptly within a monocrystalline domain. We show that by properly designing the substrate topography, these grain boundaries can be placed at desired locations and at specified misfit angles, as the thermodynamic ground state of a two-dimensional (2D) system bound to a substrate. Compared against the hypothetical competition of growing defectless 2D materials on a Gaussian-curved substrate with consequential fold development or detachment from the substrate, the nucleation and formation of finite-length grain boundaries can be made energetically favorably given sufficient substrate adhesion on the order of tens of meV/Å2 for typical 2D materials. New properties specific to certain grain boundary geometries, including magnetism and metallicity, can thus be engineered into 2D crystals through topographic design of their substrates. read less NOT USED (low confidence) D. Aussems, K. M. Bal, T. Morgan, M. V. D. Sanden, and E. Neyts, “Atomistic simulations of graphite etching at realistic time scales† †Electronic supplementary information (ESI) available. See DOI: 10.1039/c7sc02763j Click here for additional data file.,” Chemical Science. 2017. link Times cited: 5 Abstract: We demonstrate that long time-scale events in atomistic ion-… read moreAbstract: We demonstrate that long time-scale events in atomistic ion-surface bombardment simulations can be essential and need to be accounted for. read less NOT USED (low confidence) B. Farbos et al., “A time-dependent atomistic reconstruction of severe irradiation damage and associated property changes in nuclear graphite,” Carbon. 2017. link Times cited: 17 NOT USED (low confidence) W. Yan et al., “CNT-graphene heterostructures: First-principle study of electrical and thermal conductions,” 2017 18th International Conference on Electronic Packaging Technology (ICEPT). 2017. link Times cited: 2 Abstract: Heterostructures of carbon nanotube on graphene, CNT-graphen… read moreAbstract: Heterostructures of carbon nanotube on graphene, CNT-graphene, with two graphene layers connected by a CNT normal to the graphene planes, are investigated using first-principle calculations, leading to computed density of states (DOS) and electron transmission spectra. Based on these results, the structure consisting of graphene and a (4,4) CNT is determined to be metallic while that of graphene and (8,0) CNT semiconducting. Multiple peaks are observed in the transmission spectrum of both heterostructures, which depend on the width of graphene. Further, it is found that the heterostructures are three-dimensional thermal conductors, although the resistance is higher than that of pure graphene or CNT. These results lay the foundation for further studies of CNT-graphene as a potential all-carbon interconnect building block. read less NOT USED (low confidence) J. Shi, L. Liu, K. Cai, and Q. Qin, “Conditions for escape of a rotor in a rotary nanobearing from short triple-wall nanotubes,” Scientific Reports. 2017. link Times cited: 5 NOT USED (low confidence) L. G. P. Martins et al., “Raman evidence for pressure-induced formation of diamondene,” Nature Communications. 2017. link Times cited: 119 NOT USED (low confidence) Q. Luo, W. Jiang, and Q. Qin, “Possibility of Improving Oscillation Performance of Double-Walled Nanotube Oscillators via Tuning Vacancy Defects,” Journal of Nano Research. 2017. link Times cited: 5 Abstract: The oscillatory behaviors of an oscillator made from double-… read moreAbstract: The oscillatory behaviors of an oscillator made from double-walled carbon nanotubes (DWCNTs) with vacancy defects were systematically investigated via molecular dynamics simulation method. We found that the vacancy defects change the off-axial rocking motion and the van der Waals potential, resulting in more energy dissipation. Unlike the case in the C60–nanotube oscillators (Song, et al., Phys. Lett. A. 373 2009, 1058-1061) that one vacancy can make the oscillators more stable, our study showed that the vacancies cannot improve the performance of DWCNT-based oscillators no matter where vacancy defects are located. read less NOT USED (low confidence) M. Bigdeli and M. Fasano, “Thermal transmittance in graphene based networks for polymer matrix composites,” International Journal of Thermal Sciences. 2017. link Times cited: 26 NOT USED (low confidence) A. Stepanov and G. Filippov, “Channeling of low energy atomic particles in carbon nanotubes with heterojunctions,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2017. link Times cited: 7 NOT USED (low confidence) K. Grabowski, P. Zbyrad, T. Uhl, W. Staszewski, and P. Paćko, “Multiscale electro-mechanical modeling of carbon nanotube composites,” Computational Materials Science. 2017. link Times cited: 36 NOT USED (low confidence) Z. Lei, D.-S. Yang, Y. Zhang, and P. Cui, “Constructions of coal and char molecular models based on the molecular simulation technology,” Journal of Fuel Chemistry and Technology. 2017. link Times cited: 15 NOT USED (low confidence) D. Hu et al., “Strong graphene-interlayered carbon nanotube films with high thermal conductivity,” Carbon. 2017. link Times cited: 49 NOT USED (low confidence) L. Yi, T. Chang, X.-Q. Feng, Y. Zhang, J. Wang, and B. Huang, “Giant energy absorption capacity of graphene-based carbon honeycombs,” Carbon. 2017. link Times cited: 37 NOT USED (low confidence) L. Wang, Y. Li, X. Zhou, T. Li, and H. Li, “The coalescence of heterogeneous liquid metal on nano substrate,” Chemical Physics. 2017. link Times cited: 1 NOT USED (low confidence) H. Ghorbanfekr-Kalashami, K. S. Vasu, R. Nair, F. Peeters, M. Neek‐Amal, and M. Neek‐Amal, “Dependence of the shape of graphene nanobubbles on trapped substance,” Nature Communications. 2017. link Times cited: 63 NOT USED (low confidence) S. Bagheri, A. Shameli, M. Darvishi, and G. Fakhrpour, “Molecular investigation of water adsorption on graphene and graphyne surfaces,” Physica E-low-dimensional Systems & Nanostructures. 2017. link Times cited: 8 NOT USED (low confidence) M. Li et al., “A Prenecking Strategy Makes Stretched Membranes With Clamped Ends Wrinkle-Free,” Journal of Applied Mechanics. 2017. link Times cited: 6 NOT USED (low confidence) P. Parneix, A. Gamboa, C. Falvo, M. Bonnin, T. Pino, and F. Calvo, “Dehydrogenation effects on the stability of aromatic units in polycyclic aromatic hydrocarbons in the interstellar medium: A computational study at finite temperature,” Molecular Astrophysics. 2017. link Times cited: 9 NOT USED (low confidence) F. Meng, C. Chen, and J. Song, “Lattice trapping and crack decohesion in graphene,” Carbon. 2017. link Times cited: 31 NOT USED (low confidence) V. Mitrofanov, M. Slepchenkov, G. Zhang, and O. Glukhova, “Hybrid carbon nanotube-graphene monolayer films: Regularities of structure, electronic and optical properties,” Carbon. 2017. link Times cited: 22 NOT USED (low confidence) S. Suresh et al., “Protecting Silicon Film Anodes in Lithium-Ion Batteries Using an Atomically Thin Graphene Drape.,” ACS nano. 2017. link Times cited: 100 Abstract: Silicon (Si) shows promise as an anode material in lithium-i… read moreAbstract: Silicon (Si) shows promise as an anode material in lithium-ion batteries due to its very high specific capacity. However, Si is highly brittle, and in an effort to prevent Si from fracturing, the research community has migrated from the use of Si films to Si nanoparticle based electrodes. However, such a strategy significantly reduces volumetric energy density due to the porosity of Si nanoparticle electrodes. Here we show that contrary to conventional wisdom, Si films can be stabilized by two strategies: (a) anchoring the Si films to a carbon nanotube macrofilm (CNM) current collector and (b) draping the films with a graphene monolayer. After electrochemical cycling, the graphene-coated Si films on CNM resembled a tough mud-cracked surface in which the graphene capping layer suppresses delamination and stabilizes the solid electrolyte interface. The graphene-draped Si films on CNM exhibit long cycle life (>1000 charge/discharge steps) with an average specific capacity of ∼806 mAh g-1. The volumetric capacity averaged over 1000 cycles of charge/discharge is ∼2821 mAh cm-3, which is 2 to 5 times higher than what is reported in the literature for Si nanoparticle based electrodes. The graphene-draped Si anode could also be successfully cycled against commercial cathodes in a full-cell configuration. read less NOT USED (low confidence) E. Y. Ang, T. Ng, J. Yeo, R. Lin, and K. Geethalakshmi, “Nanoscale Fluid Mechanics Working Principles of Transverse Flow Carbon Nanotube Membrane for Enhanced Desalination,” International Journal of Applied Mechanics. 2017. link Times cited: 13 Abstract: This work introduces the transverse flow carbon nanotube (CN… read moreAbstract: This work introduces the transverse flow carbon nanotube (CNT) membrane, a novel membrane configuration designed to separate salt from water efficiently. The transverse flow CNT membrane uses transverse flow across horizontally stacked CNT, with neighboring CNT separated by a critical slit size. Through molecular dynamics (MD) simulation, the nano-fluidics interactions involved in the separation of salt from water using the transverse flow CNT membrane is studied. The simulation shows that this new membrane offers superior desalination performance, with permeability more than two times that of atom-thick graphene slit membrane, and orders of magnitude higher than conventional membranes. The effects of the nano-channels formed by the transverse flow CNT membrane on the behavior of water molecules and salt ions in a desalination system are studied in further detail with thermodynamic free energy computations, oxygen density mapping and hydrogen bond network studies. This simple but effective design offers an alternative solution for the practical use of CNT for efficient desalination. read less NOT USED (low confidence) X. Zhang, S. Zhao, Y. Wang, and J. Xue, “Additivity of kinetic and potential energy contributions in modification of graphene supported on SiO2,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2017. link Times cited: 2 NOT USED (low confidence) K. Cai, J.-zhou Yu, J. Shi, and Q. Qin, “Robust rotation of rotor in a thermally driven nanomotor,” Scientific Reports. 2017. link Times cited: 22 NOT USED (low confidence) A. Azizi and S. Ebrahimi, “Uniaxial-Strain Effects in the Paclitaxel Drug Molecule Adsorption on Nitrogen-Doped Graphene,” International Journal of Nanoscience. 2017. link Times cited: 2 Abstract: It has been recently investigated [A. Azizi and S. Ebrahimi,… read moreAbstract: It has been recently investigated [A. Azizi and S. Ebrahimi, Nano 9, 1450088 (2004).] the Paclitaxel (PTX) anticancer drug molecule adsorption on nitrogen doped graphene (NG). However, the surface strain effect on adsorption is not considered in the literature. In this study, using molecular dynamics (MD) simulation, we show that the PTX molecule adsorption can be tuned by exploiting the rippling effect of the strained NG. The dependence of the nitrogen concentration in the presence of ripples on the surface, arising due to thermal fluctuations, is examined. We have also considered the connection between the average distance of PTX from NG surface and the maximum induced deformation on the surface structure. It is demonstrated that the average distance of PTX from NG is increased with increasing the strain until a critical value is reached, and then it has remained almost constant. To this end, the dependence of the degree of ripple-type distortion of the surface on the PTX adsorption is investigated. read less NOT USED (low confidence) J. Zhang and C. Wang, “Buckling of Carbon Honeycombs: A New Mechanism for Molecular Mass Transportation,” Journal of Physical Chemistry C. 2017. link Times cited: 23 Abstract: Buckling of carbon honeycombs (CHCs) under uniaxial compress… read moreAbstract: Buckling of carbon honeycombs (CHCs) under uniaxial compression is studied based on molecular dynamics simulations. The uniaxial load applied to CHCs finally induces the local buckling associated with the biaxial compression state. This phenomenon originates from the residual stress in the CHCs due to the edge effect of component graphene nanoribbons. Under such a biaxial stress state, CHCs are found to exhibit two topographically different buckling modes when subjected to the uniaxial compression in the armchair and zigzag directions, respectively. In particular, the nonlocal effect originating from van der Waals interactions greatly reduces the ability of CHCs to resist structural instability and leads to early onset of CHC buckling. The buckling of CHCs is expected to be instrumental in the future applications of CHC structures. As an example, we show that an effective transportation of molecular mass enabled by the local buckling of CHCs is promising for the future CHC-based gas storage. In particular... read less NOT USED (low confidence) P. Wolski, K. Nieszporek, and T. Panczyk, “Pegylated and folic acid functionalized carbon nanotubes as pH controlled carriers of doxorubicin. Molecular dynamics analysis of the stability and drug release mechanism.,” Physical chemistry chemical physics : PCCP. 2017. link Times cited: 30 Abstract: This work deals with an analysis of the covalent functionali… read moreAbstract: This work deals with an analysis of the covalent functionalization of a carbon nanotube using polyethylene glycol chains terminated by folic acid fragments. The analysis is focused on theoretical predictions, using molecular dynamics simulations, of the properties of such constructs as pH controlled carriers of the anticancer drug doxorubicin. The analyzed systems are expected to hold the doxorubicin in the inner cavity of the carbon nanotube at neutral pH and unload the drug at slightly acidic pH. This property comes from incorporation into the nanotube of some dye molecules (p-phenylenediamine or neutral red) which undergo protonation at slightly acidic pH. We found that both dyes lead to the formation of a stable, co-absorbed phase of a doxorubicin-dye mixture inside the nanotube at physiological pH. At acidic pH we observed a spontaneous release of dyes from the nanotube, leading finally to the state with only doxorubicin encapsulated in the nanotube interior. Thus, the analyzed constructs can be considered as carriers of doxorubicin that are selective to tumor microenvironments (which exhibit reduced pH due to hypoxia and overexpression of folate receptors). However, we also found that the release of doxorubicin from the nanotube at acidic pH is kinetically blocked, at least in the case of the system sizes studied here. Thus, we also discussed some possible ways of reducing the activation barriers against doxorubicin release at acidic pH. read less NOT USED (low confidence) R. Murzaev, D. Bachurin, E. Korznikova, and S. Dmitriev, “Localized vibrational modes in diamond,” Physics Letters A. 2017. link Times cited: 47 NOT USED (low confidence) X. Wu, H. Zhao, D. Yan, and J. Pei, “Doping of graphene using ion beam irradiation and the atomic mechanism,” Computational Materials Science. 2017. link Times cited: 18 NOT USED (low confidence) Z. Zhang, A. Kutana, Y. Yang, N. V. Krainyukova, E. Penev, and B. Yakobson, “Nanomechanics of carbon honeycomb cellular structures,” Carbon. 2017. link Times cited: 58 NOT USED (low confidence) Y. Li, A. Wei, and D. Datta, “Thermal characteristics of graphene nanoribbons endorsed by surface functionalization,” Carbon. 2017. link Times cited: 32 NOT USED (low confidence) J. Silveira and A. Muniz, “First-principles calculation of the mechanical properties of diamond nanothreads,” Carbon. 2017. link Times cited: 38 NOT USED (low confidence) Y. He et al., “Tensile mechanical properties of nano-layered copper/graphene composite,” Physica E-low-dimensional Systems & Nanostructures. 2017. link Times cited: 33 NOT USED (low confidence) S. Goel, S. Chavoshi, and A. Murphy, “Molecular dynamics simulation (MDS) to study nanoscale machining processes.” 2017. link Times cited: 2 Abstract: 1 Molecular dynamics simulation (MDS) to study nanoscale cut… read moreAbstract: 1 Molecular dynamics simulation (MDS) to study nanoscale cutting processes Saurav Goel1*, Saeed Zare Chavoshi2 and Adrian Murphy3 1Precision Engineering Institute, School of Aerospace, Transport and Manufacturing, Cranfield University, Cranfield, Bedfordshire, MK430AL, UK 2Mechanical Engineering Department, Imperial College London, London, SW7 2AZ, UK 3School of Mechanical and Aerospace Engineering, Queen’s University, Belfast, BT9 5AH, UK *Corresponding author Tel.: +44 1234754132, Email address: sgoel.diamond@gmail.com read less NOT USED (low confidence) J. Larentzos and B. Rice, “Transferable Reactive Force Fields: Extensions of ReaxFF-lg to Nitromethane.,” The journal of physical chemistry. A. 2017. link Times cited: 15 Abstract: Transferable ReaxFF-lg models of nitromethane that predict a… read moreAbstract: Transferable ReaxFF-lg models of nitromethane that predict a variety of material properties over a wide range of thermodynamic states are obtained by screening a library of ∼6600 potentials that were previously optimized through the Multiple Objective Evolutionary Strategies (MOES) approach using a training set that included information for other energetic materials composed of carbon, hydrogen, nitrogen, and oxygen. Models that best match experimental nitromethane lattice constants at 4.2 K and 1 atm are evaluated for transferability to high-pressure states at room temperature and are shown to better predict various liquid- and solid-phase structural, thermodynamic, and transport properties as compared to the existing ReaxFF and ReaxFF-lg parametrizations. Although demonstrated for an energetic material, the library of ReaxFF-lg models is supplied to the scientific community to enable new research explorations of complex reactive phenomena in a variety of materials research applications. read less NOT USED (low confidence) M. An et al., “Generalized Two-Temperature Model for Coupled Phonons in Nanosized Graphene.,” Nano letters. 2017. link Times cited: 62 Abstract: The design of graphene-based composite with high thermal con… read moreAbstract: The design of graphene-based composite with high thermal conductivity requires a comprehensive understanding of phonon coupling in nanosized graphene. We extended the two-temperature model to coupled groups of phonons. The study give new physical quantities, the phonon-phonon coupling factor and length, to characterize the couplings quantitatively. Besides, our proposed coupling length has an obvious dependence on system size. Our studies can not only observe the nonequilibrium between different groups of phonons but explain theoretically the thermal resistance inside nanosized graphene. read less NOT USED (low confidence) M. Mainitz, C. Anders, and H. Urbassek, “Impact of energetic cosmic-ray ions on astrophysical ice grains,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2017. link Times cited: 3 NOT USED (low confidence) S. Liu et al., “Robust microscale superlubricity under high contact pressure enabled by graphene-coated microsphere,” Nature Communications. 2017. link Times cited: 245 NOT USED (low confidence) B. Rai and Pradip, “Modeling self-assembly of surfactants at interfaces,” Current opinion in chemical engineering. 2017. link Times cited: 11 NOT USED (low confidence) Z. Gao, H. Cai, J. Shi, L. Liu, Z. Chen, and Y. Wang, “Effect of hydrogenation and curvature of rotor on the rotation transmission of a curved nanobearing,” Computational Materials Science. 2017. link Times cited: 6 NOT USED (low confidence) F. Pan, Y. Chen, Y. Liu, and Z. Guo, “Out-of-plane bending of carbon nanotube films,” International Journal of Solids and Structures. 2017. link Times cited: 11 NOT USED (low confidence) F. Peymanirad, S. Singh, H. Ghorbanfekr-Kalashami, K. Novoselov, F. M. Peeters, and M. Neek‐Amal, “Thermal activated rotation of graphene flake on graphene,” 2D Materials. 2017. link Times cited: 16 Abstract: The self rotation of a graphene flake over graphite is contr… read moreAbstract: The self rotation of a graphene flake over graphite is controlled by the size, initial misalignment and temperature. Using both ab initio calculations and molecular dynamics simulations, we investigate annealing effects on the self rotation of a graphene flake on a graphene substrate. The energy barriers for rotation and drift of a graphene flake over graphene is found to be smaller than 25 meV/atom which is comparable to thermal energy. We found that small flakes (of about ∼4 nm) are more sensitive to temperature and initial misorientation angles than larger one (beyond 10 nm). The initial stacking configuration of the flake is found to be important for its dynamics and time evolution of misalignment. Large flakes, which are initially in the AA- or AB-stacking state with small misorientation angle, rotate and end up in the AB-stacking configuration. However small flakes can they stay in an incommensurate state specially when the initial misorientation angle is larger than 2∘. Our results are in agreement with recent experiments. read less NOT USED (low confidence) D. Harrison, E. Welchman, and T. Thonhauser, “H4-alkanes: A new class of hydrogen storage material?,” International Journal of Hydrogen Energy. 2017. link Times cited: 6 NOT USED (low confidence) L. Tao, S. T. Sreenivasan, and R. Shahsavari, “Interlaced, Nanostructured Interface with Graphene Buffer Layer Reduces Thermal Boundary Resistance in Nano/Microelectronic Systems.,” ACS applied materials & interfaces. 2017. link Times cited: 22 Abstract: Improving heat transfer in hybrid nano/microelectronic syste… read moreAbstract: Improving heat transfer in hybrid nano/microelectronic systems is a challenge, mainly due to the high thermal boundary resistance (TBR) across the interface. Herein, we focus on gallium nitride (GaN)/diamond interface-as a model system with various high power, high temperature, and optoelectronic applications-and perform extensive reverse nonequilibrium molecular dynamics simulations, decoding the interplay between the pillar length, size, shape, hierarchy, density, arrangement, system size, and the interfacial heat transfer mechanisms to substantially reduce TBR in GaN-on-diamond devices. We found that changing the conventional planar interface to nanoengineered, interlaced architecture with optimal geometry results in >80% reduction in TBR. Moreover, introduction of conformal graphene buffer layer further reduces the TBR by ∼33%. Our findings demonstrate that the enhanced generation of intermediate frequency phonons activates the dominant group velocities, resulting in reduced TBR. This work has important implications on experimental studies, opening up a new space for engineering hybrid nano/microelectronics. read less NOT USED (low confidence) L. Koziol, L. Fried, and N. Goldman, “Using Force Matching To Determine Reactive Force Fields for Water under Extreme Thermodynamic Conditions.,” Journal of chemical theory and computation. 2017. link Times cited: 24 Abstract: We present a method for the creation of classical force fiel… read moreAbstract: We present a method for the creation of classical force fields for water under dissociative thermodynamic conditions by force matching to molecular dynamics trajectories from Kohn-Sham density functional theory (DFT). We apply our method to liquid water under dissociative conditions, where molecular lifetimes are less than 1 ps, and superionic water, where hydrogen ions diffuse at liquid-like rates through an oxygen lattice. We find that, in general, our new models are capable of accurately reproducing the structural and dynamic properties computed from DFT, as well as the molecular concentrations and lifetimes. Overall, our force-matching approach presents a relatively simple way to create classical reactive force fields for a single thermodynamic state point that largely retains the accuracy of DFT while having the potential to access experimental time and length scales. read less NOT USED (low confidence) J. Zhang, T. Ragab, and C. Basaran, “Influence of vacancy defects on the damage mechanics of graphene nanoribbons,” International Journal of Damage Mechanics. 2017. link Times cited: 31 Abstract: Using molecular dynamics simulations, graphene nanoribbons w… read moreAbstract: Using molecular dynamics simulations, graphene nanoribbons with armchair chirality were subjected to displacement-controlled uniaxial tension until complete fracture at 300 K in order to understand their damage mechanics. Graphene nanoribbons with and without a vacancy defect were simulated to compare the effect of the defect on the fracture behavior. Simulations were performed for graphene nanoribbons with lengths ranging from 2.5 to 15 nm. The stress–strain curve of each case is reported, and the influence of defect on the material properties is discussed. For each sample, damage mechanics types were observed and discussed. Results show a negligible effect of the single vacancy defect on the ultimate strength of the graphene nanoribbon. However, having a single vacancy defect does influence the failure strain, as well as the damage mechanics past the ultimate stress point. read less NOT USED (low confidence) N. Karkalos and A. Markopoulos, “Modeling Nano-Metric Manufacturing Processes with Molecular Dynamics Method: A Review,” Current Nanoscience. 2016. link Times cited: 9 NOT USED (low confidence) A. Pak and G. Hwang, “Molecular Insights into the Complex Relationship between Capacitance and Pore Morphology in Nanoporous Carbon-based Supercapacitors.,” ACS applied materials & interfaces. 2016. link Times cited: 19 Abstract: Electrochemical double layer capacitors, or supercapacitors,… read moreAbstract: Electrochemical double layer capacitors, or supercapacitors, are high-power energy storage devices that consist of large surface area electrodes (filled with electrolyte) to accommodate ion packing in accordance with classical electric double layer (EDL) theory. Nanoporous carbons (NPCs) have recently emerged as a class of electrode materials with the potential to dramatically improve the capacitance of these devices by leveraging ion confinement. However, the molecular mechanisms underlying such enhancements are a clear departure from EDL theory and remain an open question. In this paper, we present the concept of ion reorganization kinetics during charge/discharge cycles, especially within highly confining subnanometer pores, which necessarily dictates the capacitance. Our molecular dynamics voltammetric simulations of ionic liquid immersed in NPC electrodes (of varying pore size distributions) demonstrate that the most efficient ion migration, and thereby largest capacitance, is facilitated by nonuniformity of shape (e.g., from cylindrical to slitlike) along nanopore channels. On the basis of this understanding, we propose that a new structural descriptor, coined as the pore shape factor, can provide a new avenue for materials optimization. These findings also present a framework to understand and evaluate ion migration kinetics within charged nanoporous materials. read less NOT USED (low confidence) W.-L. Lv, M. Winters, G. Weinberg, and A. Henry, “Understanding Divergent Thermal Conductivity in Single Polythiophene Chains Using Green-Kubo Modal Analysis and Sonification.,” The journal of physical chemistry. A. 2016. link Times cited: 8 Abstract: We used molecular dynamics simulations and the Green-Kubo mo… read moreAbstract: We used molecular dynamics simulations and the Green-Kubo modal analysis (GKMA) method as well as sonification to study the modal contributions to thermal conductivity in individual polythiophene chains. The simulations suggest that it is possible to achieve divergent thermal conductivity in individual polythiophene chains of certain lengths, with periodic boundary conditions. Application of the GKMA method further allowed for exact pinpointing of the modes responsible for the anomalous behavior. The analysis showed that transverse vibrations in the plane of the aromatic rings at low frequencies ∼0.05 THz are primarily responsible for the divergence. Within the integration time, one mode in particular exhibits a thermal conductivity contribution greater than 100 W m-1 K-1. Further investigation showed that the divergence arises from persistent correlation between the three lowest frequency modes on chains that have exact multiples of 30 unit cells in length. Sonification of the mode heat fluxes revealed regions where the heat flux amplitude yields a somewhat sinusoidal envelope with a long period similar to the relaxation time. This characteristic in the divergent mode heat fluxes gives rise to the overall thermal conductivity divergence, which strongly supports earlier hypotheses that attribute the divergence to correlated phonon-phonon scattering/interactions as opposed to a lack of scattering/interaction among modes (e.g., infinite relaxation time/ballistic transport). read less NOT USED (low confidence) I. Leven, R. Guerra, A. Vanossi, E. Tosatti, and O. Hod, “Multiwalled nanotube faceting unravelled.,” Nature nanotechnology. 2016. link Times cited: 43 NOT USED (low confidence) J. Xu and B. Zheng, “Highly effective energy dissipation system based on one-dimensionally arrayed short single-walled carbon nanotubes,” Extreme Mechanics Letters. 2016. link Times cited: 9 NOT USED (low confidence) S. Sadeghzadeh and N. Rezapour, “A study of thermal conductivity in graphene diodes and transistors with intrinsic defects and subjected to metal impurities,” Superlattices and Microstructures. 2016. link Times cited: 13 NOT USED (low confidence) E. Y. Ang, T. Ng, J. Yeo, Z. Liu, and K. Geethalakshmi, “Free-standing graphene slit membrane for enhanced desalination,” Carbon. 2016. link Times cited: 45 NOT USED (low confidence) J. Shi, H. Yin, J.-zhou Yu, L. Liu, and K. Cai, “Configuration transition between graphene and nanoscroll using kinetic energy injecting method,” Computational Materials Science. 2016. link Times cited: 8 NOT USED (low confidence) S. Volz, “Relevant Semiempirical Potentials for Phonon Properties.” 2016. link Times cited: 1 NOT USED (low confidence) A. Korchuganov, K. Zolnikov, D. Kryzhevich, and S. Psakhie, “Peculiarities of molecular hydrogen behavior in palladium nanopores of different morphology.” 2016. link Times cited: 0 Abstract: The features of molecular hydrogen adsorption in slit, cylin… read moreAbstract: The features of molecular hydrogen adsorption in slit, cylindrical and spherical palladium nanopores were studied. Calculations were carried out in the framework of molecular dynamics method. Reduction of the nanopore size leads to decrease of the gas density in the adsorbed layer. It has been found that several adsorbed layers can be formed in palladium nanopores. This behavior is caused by sufficiently strong and long-range nature of the interaction between hydrogen molecules and the palladium nanopore wall. The molecule density in the adsorbed layers decreases with decreasing pore size. A comparison of the distribution of the gas density in the cross section of palladium and carbon nanopores of different morphology was made. read less NOT USED (low confidence) Y. Fu, T. Ragab, and C. Basaran, “The effect of Stone-Wales defects on the mechanical behavior of graphene nano-ribbons,” Computational Materials Science. 2016. link Times cited: 41 NOT USED (low confidence) K. Cai, J. Luo, Y. Ling, J. Wan, and Q. Qin, “Effects of size and surface on the auxetic behaviour of monolayer graphene kirigami,” Scientific Reports. 2016. link Times cited: 31 NOT USED (low confidence) J. Liu, X. Tang, F. Chen, H. Huang, H. Li, and D. Chen, “Molecular dynamics of adhesion force of single-walled carbon nanotubes,” Diamond and Related Materials. 2016. link Times cited: 4 NOT USED (low confidence) J. Zhang, “Lattice mismatch induced curved configurations of hybrid boron nitride–carbon nanotubes,” Physica E-low-dimensional Systems & Nanostructures. 2016. link Times cited: 7 NOT USED (low confidence) T. Vo and B. H. Kim, “Transport Phenomena of Water in Molecular Fluidic Channels,” Scientific Reports. 2016. link Times cited: 72 NOT USED (low confidence) J. Gruber, A. Lang, J. Griggs, M. Taheri, G. Tucker, and M. Barsoum, “Evidence for Bulk Ripplocations in Layered Solids,” Scientific Reports. 2016. link Times cited: 74 NOT USED (low confidence) H. Farokhi, M. Païdoussis, and A. Misra, “A new nonlinear model for analyzing the behaviour of carbon nanotube-based resonators,” Journal of Sound and Vibration. 2016. link Times cited: 32 NOT USED (low confidence) P. Tredak, W. Rudnicki, and J. Majewski, “Efficient implementation of the many-body Reactive Bond Order (REBO) potential on GPU,” J. Comput. Phys. 2016. link Times cited: 4 NOT USED (low confidence) H. N. Pishkenari and P. G. Ghanbari, “Vibrational properties of C60: A comparison among different inter-atomic potentials,” Computational Materials Science. 2016. link Times cited: 11 NOT USED (low confidence) S. R. Das et al., “3D nanostructured inkjet printed graphene via UV-pulsed laser irradiation enables paper-based electronics and electrochemical devices.,” Nanoscale. 2016. link Times cited: 80 Abstract: Emerging research on printed and flexible graphene-based ele… read moreAbstract: Emerging research on printed and flexible graphene-based electronics is beginning to show tremendous promise for a wide variety of fields including wearable sensors and thin film transistors. However, post-print annealing/reduction processes that are necessary to increase the electrical conductivity of the printed graphene degrade sensitive substrates (e.g., paper) and are whole substrate processes that are unable to selectively anneal/reduce only the printed graphene-leaving sensitive device components exposed to damaging heat or chemicals. Herein a pulsed laser process is introduced that can selectively irradiate inkjet printed reduced graphene oxide (RGO) and subsequently improve the electrical conductivity (Rsheet∼0.7 kΩ□(-1)) of printed graphene above previously published reports. Furthermore, the laser process is capable of developing 3D petal-like graphene nanostructures from 2D planar printed graphene. These visible morphological changes display favorable electrochemical sensing characteristics-ferricyanide cyclic voltammetry with a redox peak separation (ΔEp) ≈ 0.7 V as well as hydrogen peroxide (H2O2) amperometry with a sensitivity of 3.32 μA mM(-1) and a response time of <5 s. Thus this work paves the way for not only paper-based electronics with graphene circuits, it enables the creation of low-cost and disposable graphene-based electrochemical electrodes for myriad applications including sensors, biosensors, fuel cells, and theranostic devices. read less NOT USED (low confidence) S. Wang, Y. Si, J. Yuan, B.-cheng Yang, and H. Chen, “Tunable thermal transport and mechanical properties of graphyne heterojunctions.,” Physical chemistry chemical physics : PCCP. 2016. link Times cited: 46 Abstract: By employing molecular dynamics simulations, a family of gra… read moreAbstract: By employing molecular dynamics simulations, a family of graphyne heterojunctions (GYHJs) made by two different graphynes (GYs) have been designed and prepared. The dependence of tunable properties of GYHJs, such as thermal conductivity, mechanical properties, interfacial thermal resistance and rectification, on the composition and type of GYHJs is determined. Upon changing the composition of a GYHJ, one can keep a constant value of its fracture strength (and/or Young's modulus), while tuning its thermal conductivity. The thermal conductivities of GYHJs in the zigzag direction are larger than those in the armchair direction, indicating GYHJs are anisotropic. By decreasing the percentage of γ-GY, the thermal conductivities of GYHJs γ-GY/6,6,12-GY/γ-GY and γ-GY/14-GY/γ-GY decrease linearly in the armchair direction, whereas they undergo three stages (first decrease, then keep a constant value, and finally increase) in the zigzag direction. Regarding the mechanical response, by increasing the percentage of the graphyne in the GYHJ which possesses smaller Young's modulus, the Young's modulus of the GYHJ decreases. These findings would provide significant insights into the potential applications of graphyne-family materials in nanodevices. read less NOT USED (low confidence) J. Hua, Y. Liu, and Y. Hou, “Study on irradiation repair of graphene with a crack,” International Journal of Computational Materials Science and Engineering. 2016. link Times cited: 3 Abstract: Due to the restrictions in graphene manufacturing process, t… read moreAbstract: Due to the restrictions in graphene manufacturing process, the presence of defects in graphene structures is almost inevitable and these defects can affect its excellent mechanical properties. In this paper, we study the reparation of cracked graphene by C ion irradiation. Molecular dynamics (MD) simulations are carried out to study the performance of graphene with a pre-crack which is irradiated by C ions. First, the reparation mechanism of defect graphene is investigated. The tensile properties of pristine graphene and graphene with a crack are simulated and compared for the cases of irradiation and without irradiation. The simulation results demonstrate that the irradiation can be used to repair the crack in graphene and can improve its mechanical properties. It means that the reparation of defective graphene with irradiation is feasible. The influences of the ion dose and ion energy on the irradiation reparation are analyzed. We found that both ion dose and ion energy have important influences on the ... read less NOT USED (low confidence) Z. Yao, C. Liu, H. Lv, and B. Liu, “Stable double helical iodine chains inside single-walled carbon nanotubes,” Physics Letters A. 2016. link Times cited: 2 NOT USED (low confidence) J. P. Mendez and M. P. Ariza, “Harmonic model of graphene based on a tight binding interatomic potential,” Journal of The Mechanics and Physics of Solids. 2016. link Times cited: 6 NOT USED (low confidence) A. Tabarraei, X. Wang, and D. Jia, “Effects of hydrogen adsorption on the fracture properties of graphene,” Computational Materials Science. 2016. link Times cited: 30 NOT USED (low confidence) S. Debroy, V. P. K. Miriyala, K. V. Sekhar, S. G. Acharyya, and A. Acharyya, “Self healing nature of bilayer graphene,” Superlattices and Microstructures. 2016. link Times cited: 7 NOT USED (low confidence) M. Dewapriya and R. Rajapakse, “Development of a homogenous nonlinear spring model characterizing the interfacial adhesion properties of graphene with surface defects,” Composites Part B-engineering. 2016. link Times cited: 16 NOT USED (low confidence) I. E. Awad and L. Ladani, “Multiscale Modeling of Novel Carbon Nanotube/Copper-Composite Material Used in Microelectronics,” Journal of Multiscale Modelling. 2016. link Times cited: 1 Abstract: Current carrying capacity is one of the elements that hinder… read moreAbstract: Current carrying capacity is one of the elements that hinders further miniaturization of Copper (Cu) interconnects. Therefore, there is a need to propose new materials with higher ampacity (current carrying capacity) that have the potential to replace Cu. Experimental observations have shown that Carbon Nanotube (CNT)/Cu-composite material has a hundredfold ampacity of Cu, which makes it a good candidate to replace Cu. However, sufficient information about the mechanical behavior of the novel CNT/Cu-composite is not available. In the current paper, the CNT/Cu-composite is utilized to construct Through Silicon Via (TSV). The mechanical behavior, specifically the fatigue life, of the CNT/Cu–TSV is evaluated by applying a multiscale modeling approach. Molecular Dynamics (MD) simulations are conducted to evaluate the tensile strength and the coefficient of thermal expansion of CNTs. MD simulation is also used to determine the interface behavior between CNTs and Cu. MD simulation results are integrated into Fi... read less NOT USED (low confidence) M. M. Islam, G. Kolesov, T. Verstraelen, E. Kaxiras, and A. V. van Duin, “eReaxFF: A Pseudoclassical Treatment of Explicit Electrons within Reactive Force Field Simulations.,” Journal of chemical theory and computation. 2016. link Times cited: 70 Abstract: We present a computational tool, eReaxFF, for simulating exp… read moreAbstract: We present a computational tool, eReaxFF, for simulating explicit electrons within the framework of the standard ReaxFF reactive force field method. We treat electrons explicitly in a pseudoclassical manner that enables simulation several orders of magnitude faster than quantum chemistry (QC) methods, while retaining the ReaxFF transferability. We delineate here the fundamental concepts of the eReaxFF method and the integration of the Atom-condensed Kohn-Sham DFT approximated to second order (ACKS2) charge calculation scheme into the eReaxFF. We trained our force field to capture electron affinities (EA) of various species. As a proof-of-principle, we performed a set of molecular dynamics (MD) simulations with an explicit electron model for representative hydrocarbon radicals. We establish a good qualitative agreement of EAs of various species with experimental data, and MD simulations with eReaxFF agree well with the corresponding Ehrenfest dynamics simulations. The standard ReaxFF parameters available in the literature are transferrable to the eReaxFF method. The computationally economic eReaxFF method will be a useful tool for studying large-scale chemical and physical systems with explicit electrons as an alternative to computationally demanding QC methods. read less NOT USED (low confidence) N. Onofrio, D. Guzman, and A. Strachan, “Atomistic simulations of electrochemical metallization cells: mechanisms of ultra-fast resistance switching in nanoscale devices.,” Nanoscale. 2016. link Times cited: 13 Abstract: We describe a new method that enables reactive molecular dyn… read moreAbstract: We describe a new method that enables reactive molecular dynamics (MD) simulations of electrochemical processes and apply it to study electrochemical metallization cells (ECMs). The model, called EChemDID, extends the charge equilibration method to capture the effect of external electrochemical potential on partial atomic charges and describes its equilibration over connected metallic structures, on-the-fly, during the MD simulation. We use EChemDID to simulate resistance switching in nanoscale ECMs; these devices consist of an electroactive metal separated from an inactive electrode by an insulator and can be reversibly switched to a low-resistance state by the electrochemical formation of a conducting filament between electrodes. Our structures use Cu as the active electrode and SiO2 as the dielectric and have dimensions at the foreseen limit of scalability of the technology, with a dielectric thickness of approximately 1 nm. We explore the effect of device geometry on switching timescales and find that nanowires with an electroactive shell, where ions migrate towards a smaller inactive electrode core, result in faster switching than planar devices. We observe significant device-to-device variability in switching timescales and intermittent switching for these nanoscale devices. To characterize the evolution in the electronic structure of the dielectric as dissolved metallic ions switch the device, we perform density functional theory calculations on structures obtained from an EChemDID MD simulation. These results confirm the appearance of states around the Fermi energy as the metallic filament bridges the electrodes and show that the metallic ions and not defects in the dielectric contribute to the majority of those states. read less NOT USED (low confidence) L. Bai, N. Srikanth, H. Wu, F. Liu, B. Liu, and K. Zhou, “Effect of environmental hydrogen atoms on the tribological behaviors of diamond-like carbon films,” Tribology International. 2016. link Times cited: 34 NOT USED (low confidence) X. Long, B. Li, L. Wang, J. Huang, J. Zhu, and S. Luo, “Shock response of Cu/graphene nanolayered composites,” Carbon. 2016. link Times cited: 78 NOT USED (low confidence) W. Kuś, A. Mrózek, and T. Burczynski, “Memetic Optimization of Graphene-Like Materials on Intel PHI Coprocessor,” International Conference on Artificial Intelligence and Soft Computing. 2016. link Times cited: 4 NOT USED (low confidence) H. Rafii-Tabar, E. Ghavanloo, and S. A. Fazelzadeh, “Nonlocal continuum-based modeling of mechanical characteristics of nanoscopic structures,” Physics Reports. 2016. link Times cited: 142 NOT USED (low confidence) K. Cai, J.-zhou Yu, J. Shi, and Q. Qin, “A method for measuring rotation of a thermal carbon nanomotor using centrifugal effect,” Scientific Reports. 2016. link Times cited: 15 NOT USED (low confidence) S. Ekesan, D. Y. Lin, and J. Herzfeld, “Magnetism and Bond Order in Diatomic Molecules Described by Semiclassical Electrons.,” The journal of physical chemistry. B. 2016. link Times cited: 6 Abstract: The past decade has seen the first attempts at quantifying a… read moreAbstract: The past decade has seen the first attempts at quantifying a semiclassical description of electrons in molecules. The challenge in this endeavor is to find potentials for electron interactions that adequately capture quantum effects. As has been the case for density functionals, the challenge is particularly great for the effects that follow from the requirement for wave function antisymmetry. Here we extend our empirical inquiry into effective potentials, from prior work on the monatomic atoms and ions of nonmetals, to diatomic molecules and ions formed by these elements. Newly adjusted and trained for the longer distances relevant to diatomics, pairwise potentials are able to fit the bond orders and magnetic properties of homonuclear species. These potentials are then found to do an excellent job of predicting the magnetism of heteronuclear species. In these molecules the predicted distribution of electrons also correctly reflects increasing ionic character with increasing difference in the electronegativities of the participating atoms. The distinctive features of the current potential are discussed, along with issues calling for further improvements. read less NOT USED (low confidence) L. Kırkayak, “Strain rate effects on compressive behavior of covalently bonded CNT networks,” Physica E-low-dimensional Systems & Nanostructures. 2016. link Times cited: 6 NOT USED (low confidence) C. Li, J. Huang, and Z. Li, “A Relation for Nanodroplet Diffusion on Smooth Surfaces,” Scientific Reports. 2016. link Times cited: 16 NOT USED (low confidence) X. Zhang, W.-X. Zhou, X.-K. Chen, Y.-Y. Liu, and K. Chen, “Significant decrease in thermal conductivity of multi-walled carbon nanotube induced by inter-wall van der Waals interactions,” Physics Letters A. 2016. link Times cited: 29 NOT USED (low confidence) Xiaoxiang 晓翔 Yu 余 et al., “How Does van der Waals Confinement Enhance Phonon Transport?,” Chinese Physics Letters. 2016. link Times cited: 10 Abstract: We study the mechanism of van der Waals (vdW) interactions o… read moreAbstract: We study the mechanism of van der Waals (vdW) interactions on phonon transport in atomic scale, which would boost developments in heat management and energy conversion. Commonly, the vdW interactions are regarded as a hindrance in phonon transport. Here we propose that the vdW confinement can enhance phonon transport. Through molecular dynamics simulations, it is realized that the vdW confinement is able to make more than two-fold enhancement on thermal conductivity of both polyethylene single chain and graphene nanoribbon. The quantitative analyses of morphology, local vdW potential energy and dynamical properties are carried out to reveal the underlying physical mechanism. It is found that the confined vdW potential barriers reduce the atomic thermal displacement magnitudes, leading to less phonon scattering and facilitating thermal transport. Our study offers a new strategy to modulate the phonon transport. read less NOT USED (low confidence) K. Cai, J.-zhou Yu, J. Wan, H. Yin, J. Shi, and Q. Qin, “Configuration jumps of rotor in a nanomotor from carbon nanostructures,” Carbon. 2016. link Times cited: 44 NOT USED (low confidence) M. Kırca and A. To, “Mechanics of CNT Network Materials.” 2016. link Times cited: 2 NOT USED (low confidence) Z. Ye, P. Egberts, G. H. Han, A. T. C. Johnson, R. Carpick, and A. Martini, “Load-Dependent Friction Hysteresis on Graphene.,” ACS nano. 2016. link Times cited: 62 Abstract: Nanoscale friction often exhibits hysteresis when load is in… read moreAbstract: Nanoscale friction often exhibits hysteresis when load is increased (loading) and then decreased (unloading) and is manifested as larger friction measured during unloading compared to loading for a given load. In this work, the origins of load-dependent friction hysteresis were explored through atomic force microscopy (AFM) experiments of a silicon tip sliding on chemical vapor deposited graphene in air, and molecular dynamics simulations of a model AFM tip on graphene, mimicking both vacuum and humid air environmental conditions. It was found that only simulations with water at the tip-graphene contact reproduced the experimentally observed hysteresis. The mechanisms underlying this friction hysteresis were then investigated in the simulations by varying the graphene-water interaction strength. The size of the water-graphene interface exhibited hysteresis trends consistent with the friction, while measures of other previously proposed mechanisms, such as out-of-plane deformation of the graphene film and irreversible reorganization of the water molecules at the shearing interface, were less correlated to the friction hysteresis. The relationship between the size of the sliding interface and friction observed in the simulations was explained in terms of the varying contact angles in front of and behind the sliding tip, which were larger during loading than unloading. read less NOT USED (low confidence) Z. Ozturk, C. Baykasoğlu, and M. Kırca, “Sandwiched graphene-fullerene composite: A novel 3-D nanostructured material for hydrogen storage,” International Journal of Hydrogen Energy. 2016. link Times cited: 71 NOT USED (low confidence) Y. Gao, Q. Liu, and B. Xu, “Lattice Mismatch Dominant Yet Mechanically Tunable Thermal Conductivity in Bilayer Heterostructures.,” ACS nano. 2016. link Times cited: 56 Abstract: Heterostructures that are assembled by interfacing two-dimen… read moreAbstract: Heterostructures that are assembled by interfacing two-dimensional (2D) materials offer a unique platform for the emerging devices with unprecedented functions. The attractive functions in heterostructures that are usually absent and beyond the single layer 2D materials are largely affected by the inherent lattice mismatch between layers. Using nonequilibrium molecular dynamics simulations, we show that the phonon thermal transport in the graphene-MoS2 bilayer heterostructure is reduced by the lattice mismatch, and the reduction can be mitigated well by an external tension, weakening the effect of inherent mismatch-induced strain on thermal conductivity. Mechanical analysis in each layered component indicates that the external tension will alleviate the lattice mismatch-induced deformation. The phonon spectra are also softened by the applied tension with a significant shift of frequency from high to low modes. A universal theory is proposed to quantitatively predict the role of the lattice mismatch in thermal conductivity of various bilayer heterostructures and shows good agreement with simulations. read less NOT USED (low confidence) M. Kański, B. Garrison, and Z. Postawa, “Effect of Oxygen Chemistry in Sputtering of Polymers.,” The journal of physical chemistry letters. 2016. link Times cited: 7 Abstract: Molecular dynamics computer simulations are used to model ki… read moreAbstract: Molecular dynamics computer simulations are used to model kiloelectronvolt cluster bombardment of pure hydrocarbon [polyethylene (PE) and polystyrene (PS)] and oxygen-containing [paraformaldehyde (PFA) and polylactic acid (PLA)] polymers by 20 keV C60 projectiles at a 45° impact angle to investigate the chemical effect of oxygen in the substrate material on the sputtering process. The simulations demonstrate that the presence of oxygen enhances the formation of small molecules such as carbon monoxide, carbon dioxide, water, and various molecules containing C═O double bonds. The explanation for the enhanced small molecule formation is the stability of carbon and oxygen multiple bonds relative to multiple bonds with only carbon atoms. This chemistry is reflected in the fraction of the ejected material that has a mass not higher than 104 amu. For PFA and PLA, the fraction is approximately 90% of the total mass, whereas for PE and PS, it is less than half. read less NOT USED (low confidence) S. Ma, M. Zhang, L. Sun, and K. W. Zhang, “High-temperature behavior of monolayer graphyne and graphdiyne,” Carbon. 2016. link Times cited: 24 NOT USED (low confidence) Z. Gao, H. Cai, J. Wan, and K. Cai, “Energy absorption induced oscillation of a rotating curved carbon nanotube in a nano bearing,” Computational Materials Science. 2016. link Times cited: 4 NOT USED (low confidence) G. Rajasekaran, R. Kumar, and A. Parashar, “Tersoff potential with improved accuracy for simulating graphene in molecular dynamics environment,” Materials Research Express. 2016. link Times cited: 71 Abstract: Graphene is an elementary unit for various carbon based nano… read moreAbstract: Graphene is an elementary unit for various carbon based nanostructures. The recent technological developments have made it possible to manufacture hybrid and sandwich structures with graphene. In order to model these nanostructures in atomistic scale, a compatible interatomic potential is required to successfully model these nanostructures. In this article, an interatomic potential with modified cut-off function for Tersoff potential was proposed to avoid overestimation and also to predict the realistic mechanical behavior of single sheet of graphene. In order to validate the modified form of cut-off function for Tersoff potential, simulations were performed with different set of temperatures and strain rates, and results were made to compare with available experimental data and molecular dynamics simulation results obtained with the help of other empirical interatomic potentials. read less NOT USED (low confidence) T. Senftle et al., “The ReaxFF reactive force-field: development, applications and future directions.” 2016. link Times cited: 1212 NOT USED (low confidence) N. Liu, J. Hong, R. Pidaparti, and X. Wang, “Fracture patterns and the energy release rate of phosphorene.,” Nanoscale. 2016. link Times cited: 44 Abstract: Phosphorene, also known as monolayer black phosphorus, has b… read moreAbstract: Phosphorene, also known as monolayer black phosphorus, has been enjoying popularity in electronic devices due to its superior electrical properties. However, it's relatively low Young's modulus, low fracture strength and susceptibility to structural failure have limited its application in mechanical devices. Therefore, in order to design more mechanically reliable devices that utilize phosphorene, it is necessary to explore the fracture patterns and energy release rate of phosphorene. In this study, molecular dynamics simulations are performed to investigate phosphorene's fracture mechanism. The results indicate that fracture under uniaxial tension along the armchair direction is attributed to a break in the interlayer bond angles, while failure in the zigzag direction is triggered by the break in both intra-layer angles and bonds. Furthermore, we developed a modified Griffith criterion to analyze the energy release rate of phosphorene and its dependence on the strain rates and orientations of cracks. Simulation results indicate that phosphorene's energy release rate remains almost unchanged in the armchair direction while it fluctuates intensively in the zigzag direction. Additionally, the strain rate was found to play a negligible role in the energy release rate. The geometrical factor α in the Griffith's criterion is almost constant when the crack orientation is smaller than 45 degree, regardless of the crack orientation and loading direction. Overall, these findings provide helpful insights into the mechanical properties and failure behavior of phosphorene. read less NOT USED (low confidence) N. Artrith and A. Urban, “An implementation of artificial neural-network potentials for atomistic materials simulations: Performance for TiO2,” Computational Materials Science. 2016. link Times cited: 350 NOT USED (low confidence) H. Yin, K. Cai, J. Wan, Z. Gao, and Z. Chen, “Dynamic response of a carbon nanotube-based rotary nano device with different carbon-hydrogen bonding layout,” Applied Surface Science. 2016. link Times cited: 10 NOT USED (low confidence) H. Wu and X. Liu, “Tuning electromechanics of dynamic ripple pattern in graphene monolayer,” Carbon. 2016. link Times cited: 10 NOT USED (low confidence) X. Zhang, Y. Gao, Y. Chen, and M. Hu, “Robustly Engineering Thermal Conductivity of Bilayer Graphene by Interlayer Bonding,” Scientific Reports. 2016. link Times cited: 28 NOT USED (low confidence) I. Giordanelli, N. Pose, M. Mendoza, and H. Herrmann, “Conformal Invariance of Graphene Sheets,” Scientific Reports. 2016. link Times cited: 19 NOT USED (low confidence) W. Wu, L. Zhang, S. Liu, H. Ren, X. Zhou, and H. Li, “Liquid-Liquid Phase Transition in Nanoconfined Silicon Carbide.,” Journal of the American Chemical Society. 2016. link Times cited: 24 Abstract: We report theoretical evidence of a liquid-liquid phase tran… read moreAbstract: We report theoretical evidence of a liquid-liquid phase transition (LLPT) in liquid silicon carbide under nanoslit confinement. The LLPT is characterized by layering transitions induced by confinement and pressure, accompanying the rapid change in density. During the layering transition, the proportional distribution of tetracoordinated and pentacoordinated structures exhibits remarkable change. The tricoordinated structures lead to the microphase separation between silicon (with the dominant tricoordinated, tetracoordinated, and pentacoordinated structures) and carbon (with the dominant tricoordinated structures) in the layer close to the walls. A strong layer separation between silicon atoms and carbon atoms is induced by strong wall-liquid forces. Importantly, the pressure confinement phase diagram with negative slopes for LLPT lines indicates that, under high pressure, the LLPT is mainly confinement-induced, but under low pressure, it becomes dominantly pressure-induced. read less NOT USED (low confidence) H. Kumar, L. Dong, and V. Shenoy, “Limits of Coherency and Strain Transfer in Flexible 2D van der Waals Heterostructures: Formation of Strain Solitons and Interlayer Debonding,” Scientific Reports. 2016. link Times cited: 53 NOT USED (low confidence) A. Markevich et al., “Electron beam controlled covalent attachment of small organic molecules to graphene.,” Nanoscale. 2016. link Times cited: 27 Abstract: The electron beam induced functionalization of graphene thro… read moreAbstract: The electron beam induced functionalization of graphene through the formation of covalent bonds between free radicals of polyaromatic molecules and C=C bonds of pristine graphene surface has been explored using first principles calculations and high-resolution transmission electron microscopy. We show that the energetically strongest attachment of the radicals occurs along the armchair direction in graphene to carbon atoms residing in different graphene sub-lattices. The radicals tend to assume vertical position on graphene substrate irrespective of direction of the bonding and the initial configuration. The "standing up" molecules, covalently anchored to graphene, exhibit two types of oscillatory motion--bending and twisting--caused by the presence of acoustic phonons in graphene and dispersion attraction to the substrate. The theoretically derived mechanisms are confirmed by near atomic resolution imaging of individual perchlorocoronene (C24Cl12) molecules on graphene. Our results facilitate the understanding of controlled functionalization of graphene employing electron irradiation as well as mechanisms of attachment of impurities via the processing of graphene nanoelectronic devices by electron beam lithography. read less NOT USED (low confidence) A. Shekhawat and R. Ritchie, “Toughness and strength of nanocrystalline graphene,” Nature Communications. 2016. link Times cited: 160 NOT USED (low confidence) Y. Chen, Y. Ma, S. Wang, Y. Zhou, and H. Liu, “The morphology of graphene on a non-developable concave substrate,” Applied Physics Letters. 2016. link Times cited: 16 Abstract: The performances of graphene sheet in micro- and nano-electr… read moreAbstract: The performances of graphene sheet in micro- and nano-electronics and devices are significantly affected by its morphology, which depends on the surface features of the supporting substrate. The substrates with non-developable concave surface are widely used with graphene sheet in applications but rarely studied. Therefore, a theoretical model is established based on the energy analysis to explain the adhesion mechanisms and predict the morphology of the graphene sheet on a non-developable concave surface. Four different morphologies of the graphene sheet are revealed, and the critical conditions are established to predict which morphology the graphene/substrate system belongs to. For the monolayer graphene sheets much larger than the concave of substrate, the final equilibrium morphology is dominated by the half cone angle of the concave. The graphene sheet conforms completely to the SiO2 substrate if the half cone angle is less than 27.5° and spans over the concave if the angel is larger than 27.5°. For... read less NOT USED (low confidence) D. B. Brommer, T. Giesa, D. I. Spivak, and M. Buehler, “Categorical prototyping: incorporating molecular mechanisms into 3D printing,” Nanotechnology. 2016. link Times cited: 8 Abstract: We apply the mathematical framework of category theory to ar… read moreAbstract: We apply the mathematical framework of category theory to articulate the precise relation between the structure and mechanics of a nanoscale system in a macroscopic domain. We maintain the chosen molecular mechanical properties from the nanoscale to the continuum scale. Therein we demonstrate a procedure to ‘protoype a model’, as category theory enables us to maintain certain information across disparate fields of study, distinct scales, or physical realizations. This process fits naturally with prototyping, as a prototype is not a complete product but rather a reduction to test a subset of properties. To illustrate this point, we use large-scale multi-material printing to examine the scaling of the elastic modulus of 2D carbon allotropes at the macroscale and validate our printed model using experimental testing. The resulting hand-held materials can be examined more readily, and yield insights beyond those available in the original digital representations. We demonstrate this concept by twisting the material, a test beyond the scope of the original model. The method developed can be extended to other methods of additive manufacturing. read less NOT USED (low confidence) A. Zaretski et al., “Metallic Nanoislands on Graphene as Highly Sensitive Transducers of Mechanical, Biological, and Optical Signals,” Nano Letters. 2016. link Times cited: 61 Abstract: This article describes an effect based on the wetting transp… read moreAbstract: This article describes an effect based on the wetting transparency of graphene; the morphology of a metallic film (≤20 nm) when deposited on graphene by evaporation depends strongly on the identity of the substrate supporting the graphene. This control permits the formation of a range of geometries, such as tightly packed nanospheres, nanocrystals, and island-like formations with controllable gaps down to 3 nm. These graphene-supported structures can be transferred to any surface and function as ultrasensitive mechanical signal transducers with high sensitivity and range (at least 4 orders of magnitude of strain) for applications in structural health monitoring, electronic skin, measurement of the contractions of cardiomyocytes, and substrates for surface-enhanced Raman scattering (SERS, including on the tips of optical fibers). These composite films can thus be treated as a platform technology for multimodal sensing. Moreover, they are low profile, mechanically robust, semitransparent and have the potential for reproducible manufacturing over large areas. read less NOT USED (low confidence) K. Cai, J. Wan, Q. Qin, and J. Shi, “Quantitative control of a rotary carbon nanotube motor under temperature stimulus,” Nanotechnology. 2016. link Times cited: 40 Abstract: Since a double-walled carbon nanotube (DWCNT)-based rotary m… read moreAbstract: Since a double-walled carbon nanotube (DWCNT)-based rotary motor driven by a uniform temperature field was proposed in 2014, how to control quantitatively the rotation of the rotor is still an open question. In this work, we present a mathematical relationship between the rotor’s speed and interaction energy. Essentially, the increment of interaction energy between the rotor and the stator(s) determines the rotor’s rotational speed, whereas the type of radial deviation of an end carbon atom on the stator determines the rotational direction. The rotational speed of the rotor can be specified by adjusting temperature and radial deviation of an end carbon atom on the stator. It is promising for designing a controllable temperature-driven rotary motor based on DWCNTs with length of few nanometers only. read less NOT USED (low confidence) Y. Wang and Z. Xu, “Water Intercalation for Seamless, Electrically Insulating, and Thermally Transparent Interfaces.,” ACS applied materials & interfaces. 2016. link Times cited: 26 Abstract: The interface between functional nanostructures and host sub… read moreAbstract: The interface between functional nanostructures and host substrates is of pivotal importance in the design of their nanoelectronic applications because it conveys energy and information between the device and environment. We report here an interface-engineering approach to establish a seamless, electrically insulating, while thermally transparent interface between graphene and metal substrates by introducing water intercalation. Molecular dynamics simulations and first-principles calculations are performed to demonstrate this concept of design, showing that the presence of the interfacial water layer helps to unfold wrinkles formed in the graphene membrane, insulate the electronic coupling between graphene and the substrate, and elevate the interfacial thermal conductance. The findings here lay the ground for a new class of nanoelectronic setups through interface engineering, which could lead to significant improvement in the performance of nanodevices, such as the field-effect transistors. read less NOT USED (low confidence) R. Kumar and A. Parashar, “Atomistic modeling of BN nanofillers for mechanical and thermal properties: a review.,” Nanoscale. 2016. link Times cited: 69 Abstract: Due to their exceptional mechanical properties, thermal cond… read moreAbstract: Due to their exceptional mechanical properties, thermal conductivity and a wide band gap (5-6 eV), boron nitride nanotubes and nanosheets have promising applications in the field of engineering and biomedical science. Accurate modeling of failure or fracture in a nanomaterial inherently involves coupling of atomic domains of cracks and voids as well as a deformation mechanism originating from grain boundaries. This review highlights the recent progress made in the atomistic modeling of boron nitride nanofillers. Continuous improvements in computational power have made it possible to study the structural properties of these nanofillers at the atomistic scale. read less NOT USED (low confidence) G. Rajasekaran, P. Narayanan, and A. Parashar, “Effect of Point and Line Defects on Mechanical and Thermal Properties of Graphene: A Review,” Critical Reviews in Solid State and Materials Sciences. 2016. link Times cited: 104 Abstract: New materials with distinctive properties are arising and at… read moreAbstract: New materials with distinctive properties are arising and attracting the scientific community at regular intervals. Stiffness and strength are the important factors in determining stability and lifetime of any technological devices, but defects which are inevitable at the time of production can alter the structural properties of any engineering materials. Developing graphene with specific structural properties depends upon controlling these defects, either by removing or deliberately engineering atomic structure to gain or tailoring specific properties. In this article, a comprehensive review of defective graphene sheets with respect to its mechanical and thermal properties are presented and examined. read less NOT USED (low confidence) C. Li, F. Pan, C. Niu, W. Chen, and Y. Jia, “Anomalous heat conduction in asymmetric graphene Y junctions,” Physics Letters A. 2015. link Times cited: 0 NOT USED (low confidence) J. Liu, Z. Xu, Z. Cheng, S. Xu, and X. Wang, “Thermal Conductivity of Ultrahigh Molecular Weight Polyethylene Crystal: Defect Effect Uncovered by 0 K Limit Phonon Diffusion.,” ACS applied materials & interfaces. 2015. link Times cited: 49 Abstract: Crystalline ultrahigh molecular weight polyethylene (UHMWPE)… read moreAbstract: Crystalline ultrahigh molecular weight polyethylene (UHMWPE) has the highest reported thermal conductivity at room temperature: 104 W/(m·K), while theoretical predictions proposed an even higher value of 300 W/(m·K). Defects and amorphous fraction in practical UHMWPE fibers significantly reduces the thermal conductivity from the ideal value. Although the amorphous effect can be readily analyzed based on the effective medium theory, the defect effects are poorly understood. This work reports on the temperature-dependent behavior (down to 22 K) of thermal diffusivity and conductivity of UHMWPE fibers in anticipation of observing the reduction in phonon density and scattering rate against temperature and of freezing out high-momentum phonons to clearly observe the defect effects. By studying the temperature-dependent behavior of thermal reffusivity (Θ, inverse of thermal diffusivity) of UHMWPE fibers, we are able to quantify the defect effects on thermal conductivity. After taking out the amorphous region's effect, the residual thermal reffusivities (Θ0) for the studied two samples at the 0 K limit are determined as 3.45 × 10(4) and 2.95 × 10(4) s/m(2), respectively. For rare-/no-defects crystalline materials, Θ0 should be close to zero at the 0 K limit. The defect-induced low-momentum phonon mean free paths are determined as 8.06 and 9.42 nm for the two samples. They are smaller than the crystallite size in the (002) direction (19.7 nm) determined by X-ray diffraction. This strongly demonstrates the diffuse phonon scattering at the grain boundaries. The grain boundary thermal conductance (G) can be evaluated as G ≈ βρc(p)v with sound accuracy. At room temperature, G is around 3.73 GW/(m(2)·K) for S2, comparable to that of interfaces with tight atomic bonding. read less NOT USED (low confidence) D. Datta, S. Nadimpalli, Y. Li, and V. Shenoy, “Effect of crack length and orientation on the mixed-mode fracture behavior of graphene,” Extreme Mechanics Letters. 2015. link Times cited: 46 NOT USED (low confidence) R. Nazemnezhad, “Nonlocal Timoshenko beam model for considering shear effect of van der Waals interactions on free vibration of multilayer graphene nanoribbons,” Composite Structures. 2015. link Times cited: 30 NOT USED (low confidence) S. Liu, H. Li, Y. He, X.-Y. Li, Y. Li, and X. Wang, “Pathway into the silicon nucleation on silicene substrate at nanoscale,” Materials & Design. 2015. link Times cited: 11 NOT USED (low confidence) N. Orekhov and V. Stegailov, “Molecular-dynamics based insights into the problem of graphite melting,” Journal of Physics: Conference Series. 2015. link Times cited: 11 Abstract: The experimental data on graphite melting temperature remain… read moreAbstract: The experimental data on graphite melting temperature remain poorly determined despite the long history of investigations. The experimental results cover the wide span from 3800 to 5000 K that is an essentially larger uncertainty than the errors of individual experiments. In this work, we deploy the molecular dynamics method and expand our previous study of the kinetics of graphite melting comparing different carbon interatomic potentials. Here we consider the melting front propagation rate, the aspects of defect formation and single graphene layer decay. The results obtained allow us also to discuss the aspects of graphite-vapor and possible graphite-carbyne phase transitions at low pressures. read less NOT USED (low confidence) M. Dewapriya, R. Rajapakse, and N. Nigam, “Influence of hydrogen functionalization on the fracture strength of graphene and the interfacial properties of graphene–polymer nanocomposite,” Carbon. 2015. link Times cited: 44 NOT USED (low confidence) R. Hardikar, A. Samanta, A. Manjanath, and A. Singh, “Vacancy mediated clipping of multi-layered graphene: A precursor for 1, 2 and 3D carbon structures,” Carbon. 2015. link Times cited: 5 NOT USED (low confidence) X. Liu, G. Zhang, and Y.-W. Zhang, “Surface-engineered nanoscale diamond films enable remarkable enhancement in thermal conductivity and anisotropy,” Carbon. 2015. link Times cited: 13 NOT USED (low confidence) H.-C. Zhao, L. Bian, and J. Pan, “A temperature related study on bifurcation strain and force of carbon nanotubes,” Computational Materials Science. 2015. link Times cited: 4 NOT USED (low confidence) J. Zhang, Y. Feng, H. Yuan, D. Feng, X. Zhang, and G. Wang, “Thermal properties of C17H36/MCM-41 composite phase change materials,” Computational Materials Science. 2015. link Times cited: 23 NOT USED (low confidence) S. Debroy, V. P. K. Miriyala, K. V. Sekhar, S. G. Acharyya, and A. Acharyya, “Graphene heals thy cracks,” Computational Materials Science. 2015. link Times cited: 12 NOT USED (low confidence) H. N. Pishkenari, A. Nemati, A. Meghdari, and S. Sohrabpour, “A close look at the motion of C60 on gold,” Current Applied Physics. 2015. link Times cited: 30 NOT USED (low confidence) B. Farbos, J.-P. D. Costa, G. Vignoles, and J.-M. Leyssale, “Nanoscale elasticity of highly anisotropic pyrocarbons,” Carbon. 2015. link Times cited: 20 NOT USED (low confidence) H. Zhang, Z. Guo, H. Gao, T. Chang, and T. Chang, “Stiffness-dependent interlayer friction of graphene,” Carbon. 2015. link Times cited: 95 NOT USED (low confidence) A. Korchuganov, K. Zolnikov, D. Kryzhevich, and S. Psakhie, “Effect of the shape and size of carbon nanopores on kinetic properties of molecular hydrogen.” 2015. link Times cited: 1 Abstract: A molecular dynamics simulation is performed to investigate … read moreAbstract: A molecular dynamics simulation is performed to investigate the behavior of hydrogen molecules in carbon nanopores of slit-like, cylindrical and spherical shapes. The density of adsorbed gas is found to depend on the pore size. In the direction from the adsorbed layer to the pore center there appears a region with low gas density. The higher the gas density in the adsorbed layer, the higher the density decrease in the neighboring region. It is shown that the wall surface curvature is the main factor contributing to an increase in the adsorbed gas density with decreasing pore size. Therefore, the adsorbate density growth with decreasing pore size is most rapid in spherical pores. read less NOT USED (low confidence) J. Baimova and S. Dmitriev, “Energy Exchange Between the Discrete Breathers in Graphane,” Russian Physics Journal. 2015. link Times cited: 4 NOT USED (low confidence) S. R. Das et al., “Single-Layer Graphene as a Barrier Layer for Intense UV Laser-Induced Damages for Silver Nanowire Network.,” ACS nano. 2015. link Times cited: 52 Abstract: Single-layer graphene (SLG) has been proposed as the thinnes… read moreAbstract: Single-layer graphene (SLG) has been proposed as the thinnest protective/barrier layer for wide applications involving resistance to oxidation, corrosion, atomic/molecular diffusion, electromagnetic interference, and bacterial contamination. Functional metallic nanostructures have lower thermal stability than their bulk forms and are therefore susceptible to high energy photons. Here, we demonstrate that SLG can shield metallic nanostructures from intense laser radiation that would otherwise ablate them. By irradiation via a UV laser beam with nanosecond pulse width and a range of laser intensities (in millions of watt per cm(2)) onto a silver nanowire network, and conformally wrapping SLG on top of the nanowire network, we demonstrate that graphene "extracts and spreads" most of the thermal energy away from nanowire, thereby keeping it damage-free. Without graphene wrapping, the radiation would fragment the wires into smaller pieces and even decompose them into droplets. A systematic molecular dynamics simulation confirms the mechanism of SLG shielding. Consequently, particular damage-free and ablation-free laser-based nanomanufacturing of hybrid nanostructures might be sparked off by application of SLG on functional surfaces and nanofeatures. read less NOT USED (low confidence) C. G. Fernández, S. Picaud, and M. Devel, “Calculations of the mass absorption cross sections for carbonaceous nanoparticles modeling soot,” Journal of Quantitative Spectroscopy & Radiative Transfer. 2015. link Times cited: 20 NOT USED (low confidence) Y. Fu, J. Michopoulos, and J. H. Song, “Dynamics response of polyethylene polymer nanocomposites to shock wave loading,” Journal of Polymer Science Part B. 2015. link Times cited: 24 Abstract: The shock response of polyethylene polymer modified by nanop… read moreAbstract: The shock response of polyethylene polymer modified by nanoparticles (NP) is investigated using a coarse-grained molecular dynamics simulation. The us-up Hugoniot analysis yields a linear relationship under the range of particle velocity investigated, in agreement with previous simulation and experimental results. NP addition improves the mechanical properties of the composites, as reflected by the increased Young's modulus and yield strength especially in the case of shorter chain length of polymer. This is directly related to the increased shock impedance with NP volume fraction, as demonstrated by the enhanced pressure in the shocked state, slightly reduced microscopic deformation, and increased shock velocity. The layered structure with alternate soft and hard regions, with NP addition only in the hard regions, leads to significantly enhanced microscopic deformation in the soft regions. It is also important that the shock impedance difference between the soft and hard region to be large enough to facilitate the energy absorption through plastic deformation in the soft regions. © 2015 Wiley Periodicals, Inc. J. Polym. Sci., Part B: Polym. Phys. 2015, 53, 1292–1302 read less NOT USED (low confidence) Y. Li and G. Seidel, “Multiscale modeling of functionalized interface effects on the effective elastic material properties of CNT–polyethylene nanocomposites,” Computational Materials Science. 2015. link Times cited: 30 NOT USED (low confidence) J. Wallace and L. Shao, “Defect-induced carbon nanoscroll formation,” Carbon. 2015. link Times cited: 16 NOT USED (low confidence) R. Ansari, A. Shahabodini, and H. Rouhi, “A nonlocal plate model incorporating interatomic potentials for vibrations of graphene with arbitrary edge conditions,” Current Applied Physics. 2015. link Times cited: 37 NOT USED (low confidence) E. Olson et al., “Capacitive Sensing of Intercalated H2O Molecules Using Graphene.,” ACS applied materials & interfaces. 2015. link Times cited: 25 Abstract: Understanding the interactions of ambient molecules with gra… read moreAbstract: Understanding the interactions of ambient molecules with graphene and adjacent dielectrics is of fundamental importance for a range of graphene-based devices, particularly sensors, where such interactions could influence the operation of the device. It is well-known that water can be trapped underneath graphene and its host substrate; however, the electrical effect of water beneath graphene and the dynamics of how the interfacial water changes with different ambient conditions has not been quantified. Here, using a metal-oxide-graphene variable-capacitor (varactor) structure, we show that graphene can be used to capacitively sense the intercalation of water between graphene and HfO2 and that this process is reversible on a fast time scale. Atomic force microscopy is used to confirm the intercalation and quantify the displacement of graphene as a function of humidity. Density functional theory simulations are used to quantify the displacement of graphene induced by intercalated water and also explain the observed Dirac point shifts as being due to the combined effect of water and oxygen on the carrier concentration in the graphene. Finally, molecular dynamics simulations indicate that a likely mechanism for the intercalation involves adsorption and lateral diffusion of water molecules beneath the graphene. read less NOT USED (low confidence) D. Sfyris, E. Koukaras, N. Pugno, and C. Galiotis, “Graphene as a hexagonal 2-lattice: Evaluation of the in-plane material constants for the linear theory. A multiscale approach,” Journal of Applied Physics. 2015. link Times cited: 11 Abstract: Continuum modeling of free-standing graphene monolayer, view… read moreAbstract: Continuum modeling of free-standing graphene monolayer, viewed as a two dimensional 2-lattice, requires specification of the components of the shift vector that acts as an auxiliary variable. If only in-plane motions are considered, the energy depends on an in-plane strain measure and the shift vector. The assumption of geometrical and material linearity leads to quadratic energy terms with respect to the shift vector, the strain tensor, and their combinations. Graphene's hexagonal symmetry reduces the number of independent moduli then to four. We evaluate these four material parameters using molecular calculations and the adaptive intermolecular reactive empirical bond order potential and compare them with standard linear elastic constitutive modeling. The results of our calculations show that the predicted values are in reasonable agreement with those obtained solely from our molecular calculations as well as those from the literature. To the best of our knowledge, this is the first attempt to measure mechanical properties when graphene is modeled as a hexagonal 2-lattice. This work targets at the continuum scale when the insight measurements come from finer scales using atomistic simulations. read less NOT USED (low confidence) A. Mrózek, W. Kuś, and T. Burczynski, “Nano level optimization of graphene allotropes by means of a hybrid parallel evolutionary algorithm,” Computational Materials Science. 2015. link Times cited: 19 NOT USED (low confidence) Y. Chen, Z. Wang, S. Wang, Z. Zhou, J. Zhang, and B. Liu, “Carbon Nanotube Reinforced Composites: The Smaller Diameter, the Higher Fracture Toughness?,” Journal of Applied Mechanics. 2015. link Times cited: 9 NOT USED (low confidence) R. Rahman and J. Foster, “A molecular dynamics based investigation of thermally vibrating graphene under different boundary conditions,” Physica E-low-dimensional Systems & Nanostructures. 2015. link Times cited: 11 NOT USED (low confidence) J. Huang and C. Wong, “Mechanical properties of bundled carbon nanoscroll,” Mechanics of Materials. 2015. link Times cited: 5 NOT USED (low confidence) A. Gamboa, G. Vignoles, and J.-M. Leyssale, “On the prediction of graphene’s elastic properties with reactive empirical bond order potentials,” Carbon. 2015. link Times cited: 34 NOT USED (low confidence) A. Kvashnin, P. Sorokin, and B. Yakobson, “Flexoelectricity in Carbon Nanostructures: Nanotubes, Fullerenes, and Nanocones.,” The journal of physical chemistry letters. 2015. link Times cited: 63 Abstract: We report theoretical analysis of the electronic flexoelectr… read moreAbstract: We report theoretical analysis of the electronic flexoelectric effect associated with nanostructures of sp(2) carbon (curved graphene). Through the density functional theory calculations, we establish the universality of the linear dependence of flexoelectric atomic dipole moments on local curvature in various carbon networks (carbon nanotubes, fullerenes with high and low symmetry, and nanocones). The usefulness of such dependence is in the possibility to extend the analysis of any carbon systems with local deformations with respect to their electronic properties. This result is exemplified by exploring of flexoelectric effect in carbon nanocones that display large dipole moment, cumulative over their surface yet surprisingly scaling exactly linearly with the length, and with sine-law dependence on the apex angle, dflex ~ L sin(α). Our study points out the opportunity of predicting the electric dipole moment distribution on complex graphene-based nanostructures based only on the local curvature information. read less NOT USED (low confidence) J. Shang et al., “Effect of folded and crumpled morphologies of graphene oxide platelets on the mechanical performances of polymer nanocomposites,” Polymer. 2015. link Times cited: 45 NOT USED (low confidence) H. Chen, L. Zhang, M. Becton, H. Nie, J. Chen, and X. Wang, “Molecular dynamics study of a CNT-buckyball-enabled energy absorption system.,” Physical chemistry chemical physics : PCCP. 2015. link Times cited: 15 Abstract: An energy absorption system (EAS) composed of a carbon nanot… read moreAbstract: An energy absorption system (EAS) composed of a carbon nanotube (CNT) with nested buckyballs is put forward for energy dissipation during impact owing to the outstanding mechanical properties of both CNTs and buckyballs. Here we implement a series of molecular dynamics (MD) simulations to investigate the energy absorption capabilities of several different EASs based on a variety of design parameters. For example, the effects of impact energy, the number of nested buckyballs, and of the size of the buckyballs are analyzed to optimize the energy absorption capability of the EASs by tuning the relevant design parameters. Simulation results indicate that the energy absorption capability of the EAS is closely associated with the deformation characteristics of the confined buckyballs. A low impact energy leads to recoverable deformation of the buckyballs and the dissipated energy is mainly converted to thermal energy. However, a high impact energy yields non-recoverable deformation of buckyballs and thus the energy dissipation is dominated by the strain energy of the EAS. The simulation results also reveal that there exists an optimal value of the number of buckyballs for an EAS under a certain impact energy. Larger buckyballs are able to deform to a larger degree yet also need less impact energy to induce plastic deformation, therefore performing with a better overall energy absorption ability. Overall, the EAS in this study shows a remarkably high energy absorption density of 2 kJ g(-1), it is a promising candidate for mitigating impact energy and sheds light on the research of buckyball-filled CNTs for other applications. read less NOT USED (low confidence) K. Cai, H. Cai, J. Shi, and Q. Qin, “A nano universal joint made from curved double-walled carbon nanotubes,” Applied Physics Letters. 2015. link Times cited: 28 Abstract: A nano universal joint is constructed from curved double-wal… read moreAbstract: A nano universal joint is constructed from curved double-wall carbon nanotubes with a short outer tube as stator and a long inner tube as a rotor. When one end of the rotor is driven (by a rotary motor) to rotate, the same rotational speed but with different rotational direction will be induced at the other end of the rotor. This mechanism makes the joint useful for designing a flexible nanodevice with an adjustable output rotational signal. The motion transmission effect of the universal joint is analyzed using a molecular dynamics simulation approach. In particular, the effects of three factors are investigated. The first factor is the curvature of the stator, which produces a different rotational direction of the rotor at the output end. The second is the bonding conditions of carbon atoms on the adjacent tube ends of the motor and the rotor, sp1 or sp2 atoms, which create different attraction between the motor and the rotor. The third is the rotational speed of the motor, which can be considered as th... read less NOT USED (low confidence) D. Scopece and B. Thijsse, “Comment on: ‘An improved molecular dynamics potential for the Al–O system’ Computational Materials Science 53, 483 (2012),” Computational Materials Science. 2015. link Times cited: 4 NOT USED (low confidence) Y. Liang, Q. Han, and S. Huan, “The Effects of Temperature and Vacancies on the Elastic Modulus and Strength of Graphene Sheet,” Journal of Thermal Stresses. 2015. link Times cited: 6 Abstract: In this article, the tensile strength, fracture strain and e… read moreAbstract: In this article, the tensile strength, fracture strain and elastic modulus of graphene sheet (GS) containing randomly distributed vacancies are investigated using molecular dynamics simulations, and the effects of temperature and vacancy defect on these mechanical properties are analyzed. The presences of defects dramatically degrade the mechanical performance of GSs. When the number of defects is large enough the failure mechanism of the GS will change. The defects deteriorate the mechanical properties of the GSs by reducing their tensile strength, failure strain and elastic modulus. However, the discrepancies between 0.01 K and the finite temperature (300 K, 600 K and 900 K) remain almost the same as the percentage of vacancy increases. read less NOT USED (low confidence) L. A. S. de Oliveira and P. Greaney, “Thermal resistance from irradiation defects in graphite,” Computational Materials Science. 2015. link Times cited: 8 NOT USED (low confidence) V. Polukhin and N. Vatolin, “Stability and thermal evolution of transition metal and silicon clusters,” Russian Chemical Reviews. 2015. link Times cited: 18 Abstract: The results of computer simulation studies of transition met… read moreAbstract: The results of computer simulation studies of transition metal and silicon clusters published in the last decade are summarized. Comparative analysis of the stability and thermal evolution of nanoclusters is performed depending on the preparation method, type of bonds, atom packing, coherence of the constituent nanofragments, surface morphology and change in the relationship between the short- and long-range ordering with increasing size. Taking account of the substrate nature and dimensionality of the cluster disperse systems being simulated, most important structure-dependent kinetic and mechanical characteristics are discussed, including specific temperature ranges of disordering corresponding to isomerization and quasi-melting. The bibliography includes 263 references. read less NOT USED (low confidence) R. Skorpa, T. Vlugt, D. Bedeaux, and S. Kjelstrup, “Diffusion of Heat and Mass in a Chemically Reacting Mixture away from Equilibrium,” Journal of Physical Chemistry C. 2015. link Times cited: 5 Abstract: We report transport properties for the hydrogen dissociation… read moreAbstract: We report transport properties for the hydrogen dissociation reaction in a temperature gradient, at conditions where reactants and product concentrations are significant (ca. 50% dissociation, 104 K). This is the first time transport properties are obtained from nonequilibrium molecular dynamics simulations of a reaction away from chemical equilibrium, with −1 < ΔrG/RT < 1, and in the presence of a thermal gradient larger than 1011 K m–1. The results, which are described by nonequilibrium thermodynamic theory, show that a strongly endothermic reaction has a large impact on the transport coefficients. The thermal conductivity away from equilibrium was 4 times the value at zero mass fluxes, which was comparable to that of dense gas at high temperature (≈1 W/m K). The vibrational degrees of freedom of the molecule may help explain the large thermal conductivity away from chemical equilibrium. The observed interdiffusion coefficient was smaller than typical for gases (10–7 m2/s). The coupling of heat and mass... read less NOT USED (low confidence) S. Gill, J. H. Hinnefeld, S. Zhu, W. J. Swanson, T. Li, and N. Mason, “Mechanical Control of Graphene on Engineered Pyramidal Strain Arrays.,” ACS nano. 2015. link Times cited: 38 Abstract: Strain can tune desirable electronic behavior in graphene, b… read moreAbstract: Strain can tune desirable electronic behavior in graphene, but there has been limited progress in controlling strain in graphene devices. In this paper, we study the mechanical response of graphene on substrates patterned with arrays of mesoscale pyramids. Using atomic force microscopy, we demonstrate that the morphology of graphene can be controlled from conformal to suspended depending on the arrangement of pyramids and the aspect ratio of the array. Nonuniform strains in graphene suspended across pyramids are revealed by Raman spectroscopy and supported by atomistic modeling, which also indicates strong pseudomagnetic fields in the graphene. Our results suggest that incorporating mesoscale pyramids in graphene devices is a viable route to achieving strain-engineering of graphene. read less NOT USED (low confidence) W.-J. Lee, M. Ho, C.-P. Huang, C. Chou, J. Tsai, and W. Su, “Using a functional C84 monolayer to improve the mechanical properties and alter substrate deformation,” RSC Advances. 2015. link Times cited: 1 Abstract: The nanoindentations of a silicon (111) substrate covered wi… read moreAbstract: The nanoindentations of a silicon (111) substrate covered with a manipulated C84 monolayer are explored by molecular dynamics (MD) simulation and further verified by experiments. Calculations show that pop-in events and a stick–slip event are exhibited in the C84/Si substrate during the loading process, where the pop-in events are caused by the severe deformation of the C84 molecule, while the stick–slip event takes place at the interface between the tip and C84 molecule. The resulting deformed conformations and mechanical properties influenced by the diverse indentation mechanisms are also presented. Such a nanoindentation simulation model provides a powerful way to understand at an atomic level the interaction of the parts of an interface, and of the system as a whole. The experimental measurements from ultra-high vacuum atomic force microscopy (AFM) are compared with theoretical findings. Our investigations offer a possible replacement for semiconductor carbide. read less NOT USED (low confidence) M. Gill-Comeau and L. J. Lewis, “On the importance of collective excitations for thermal transport in graphene,” Applied Physics Letters. 2015. link Times cited: 21 Abstract: We use equilibrium molecular dynamics (MD) simulations to st… read moreAbstract: We use equilibrium molecular dynamics (MD) simulations to study heat transport in bulk single-layer graphene. Through a modal analysis of the MD trajectories employing a time-domain formulation, we find that collective excitations involving flexural acoustic (ZA) phonons, which have been neglected in the previous MD studies, actually dominate the heat flow, generating as much as 78% of the flux. These collective excitations are, however, much less significant if the atomic displacements are constrained in the lattice plane. Although relaxation is slow, we find graphene to be a regular (non-anomalous) heat conductor for sample sizes of order 40 μm and more. read less NOT USED (low confidence) Y. Gao, X. Zhang, Y. Jing, and M. Hu, “The unexpected non-monotonic inter-layer bonding dependence of the thermal conductivity of bilayered boron nitride.,” Nanoscale. 2015. link Times cited: 20 Abstract: Hexagonal boron nitride (BN) and its bilayer form are very f… read moreAbstract: Hexagonal boron nitride (BN) and its bilayer form are very fascinating two-dimensional materials that have attracted tremendous interest recently. Their realistic applications in emerging nanoelectronics usually quest for manipulating the thermal transport properties in a precise manner. Using nonequilibrium molecular dynamics simulations, we herein studied the effect of inter-layer covalent bonding on the thermal conductivity of bilayered BN. We found that the in-plane thermal conductivity of bilayered BN, which can be largely tuned by introducing covalent bonding between the two BN layers, depends not only on the inter-layer bonding density, but also on the detailed topological configuration of the inter-layer bonds. For randomly distributed inter-layer bonding the thermal conductivity of bilayered BN decreases monotonically with inter-layer bonding density, the same behavior already found for bilayered graphene. However, for regularly arranged inter-layer bonding the thermal conductivity of bilayered BN surprisingly possesses a non-monotonic dependence on the inter-layer bonding density. This non-intuitive non-monotonic dependence is further explained by performing spectral energy density analysis, where the peak and valley values of the thermal conductivity are governed by different mechanisms. These results suggest the application of inter-layer covalent bonding in designing nanoscale devices with precisely tunable thermal conductivities. read less NOT USED (low confidence) A. Akimov and O. Prezhdo, “Large-Scale Computations in Chemistry: A Bird’s Eye View of a Vibrant Field.,” Chemical reviews. 2015. link Times cited: 171 NOT USED (low confidence) B. Arash, J.-W. Jiang, and T. Rabczuk, “A review on nanomechanical resonators and their applications in sensors and molecular transportation,” Applied physics reviews. 2015. link Times cited: 112 Abstract: Nanotechnology has opened a new area in science and engineer… read moreAbstract: Nanotechnology has opened a new area in science and engineering, leading to the development of novel nano-electromechanical systems such as nanoresonators with ultra-high resonant frequencies. The ultra-high-frequency resonators facilitate wide-ranging applications such as ultra-high sensitive sensing, molecular transportation, molecular separation, high-frequency signal processing, and biological imaging. This paper reviews recent studies on dynamic characteristics of nanoresonators. A variety of theoretical approaches, i.e., continuum modeling, molecular simulations, and multiscale methods, in modeling of nanoresonators are reviewed. The potential application of nanoresonators in design of sensor devices and molecular transportation systems is introduced. The essence of nanoresonator sensors for detection of atoms and molecules with vibration and wave propagation analyses is outlined. The sensitivity of the resonator sensors and their feasibility in detecting different atoms and molecules are particularly discussed. Furthermore, the applicability of molecular transportation using the propagation of mechanical waves in nanoresonators is presented. An extended application of the transportation methods for building nanofiltering systems with ultra-high selectivity is surveyed. The article aims to provide an up-to-date review on the mechanical properties and applications of nanoresonators, and inspire additional potential of the resonators. read less NOT USED (low confidence) M. M. S. Fakhrabadi, A. Rastgoo, and M. Ahmadian, “On the Pull-in Instability of Double-Walled Carbon Nanotube-Based Nano Electromechanical Systems with Cross-Linked Walls,” Fullerenes, Nanotubes and Carbon Nanostructures. 2015. link Times cited: 5 Abstract: This paper presents the deflection and pull-in instability o… read moreAbstract: This paper presents the deflection and pull-in instability of the double-walled carbon nanotubes with different dimensions and boundary conditions. Molecular dynamic technique is applied to model the desired behaviors of the nano systems. The effects of cross-linking between the carbon walls are investigated on the pull-in charge. In addition, the influences of axial stretching on the pull-in charge and vibrational frequencies of the carbon nanotubes are scrutinized. The effects of electrostatic charge distribution on the vibration amplitude are also reported. read less NOT USED (low confidence) E. Penev, V. Artyukhov, and B. Yakobson, “Basic structural units in carbon fibers: Atomistic models and tensile behavior,” Carbon. 2015. link Times cited: 35 NOT USED (low confidence) S. H. Mahboobi, A. Taheri, H. N. Pishkenari, A. Meghdari, and M. Hemmat, “Cellular Injection Using Carbon Nanotube: A Molecular Dynamics Study,” NANO. 2015. link Times cited: 6 Abstract: Determination of an injection condition which is minimally i… read moreAbstract: Determination of an injection condition which is minimally invasive to the cell membrane is of great importance in drug and gene delivery. For this purpose, a series of molecular dynamics (MD) simulations are conducted to study the penetration of a carbon nanotube (CNT) into a pure POPC cell membrane under various injection velocities, CNT tilt angles and chirality parameters. The simulations are nonequilibrium and all-atom. The force and stress exerted on the nanotube, deformation of the lipid bilayer, and strain of the CNT atoms are inspected during the simulations. We found that a lower nanotube velocity results in successfully entering the membrane with minimum disruption in the CNT and the lipid bilayer, and CNT's chirality distinctly affects the results. Moreover, it is shown that the tilt angle of the CNT influences the nanotube's buckling and may result in destroying the membrane structure during the injection process. read less NOT USED (low confidence) D. Jenson and V. Unnikrishnan, “Energy dissipation of nanocomposite based helmets for blast-induced traumatic brain injury mitigation,” Composite Structures. 2015. link Times cited: 27 NOT USED (low confidence) X.-hui Yan and Q. Yang, “Rotation, elongation and failure of CNT nanoropes induced by electric field,” Computational Materials Science. 2015. link Times cited: 3 NOT USED (low confidence) A. Galashev, “Computer study of the removal of Cu from the graphene surface using Ar clusters,” Computational Materials Science. 2015. link Times cited: 22 NOT USED (low confidence) Y. Shi, “A minimalist’s reactive potential for efficient molecular modelling of chemistry,” Molecular Simulation. 2015. link Times cited: 1 Abstract: We review a minimalist's reactive force field, reactive… read moreAbstract: We review a minimalist's reactive force field, reactive state summation (RSS) potential. The essence of RSS potential scheme is to model each reactive state by individual non-reactive force fields, then modulate each term by a reaction-coordinate-dependent weight function, finally sum together to obtain the reactive potential. Compared with existing reactive potentials, RSS potential is easier to formulate and parameterise and is computationally efficient, at the expense of lesser accuracy. Thus, RSS potential can be regarded as a ‘reactive Lennard-Jones’ potential. Three exemplary RSS potentials are described in the context of their respective chemical systems: RSS-nitrogen for modelling detonation, RSS-carbon for modelling pyrolysis of activated carbon and RSS-fuel-catalyst for modelling catalytic chemical reaction. read less NOT USED (low confidence) A. Delcorte, V. Cristaudo, V. Lebec, and B. Czerwinski, “Re-print of ‘Sputtering of polymers by keV clusters: Microscopic views of the molecular dynamics,’” International Journal of Mass Spectrometry. 2015. link Times cited: 2 NOT USED (low confidence) M. Gatchell et al., “Ion-Induced Reactivity in Pyrene Clusters,” Journal of Physics: Conference Series. 2015. link Times cited: 2 Abstract: We report experimental indications of chemical reactions ins… read moreAbstract: We report experimental indications of chemical reactions inside clusters of pyrene (C16H10) molecules following collisions with 11.25 keV He+ - and 12.0 keV Ar2+ ions. It appears that bond-forming reactions are more likely with the heavier projectile. We have also performed classical molecular dynamics simulations of these processes where we treat the interaction between the projectiles and all atoms in the cluster as well as non-dispersive and dispersive forces between all atoms in the cluster before, during and after the collision. The time step is typically 10−17 s and the total simulation time 1 picosecond. The simulations were performed for a fixed cluster size with 36 pyrene molecules, although there is a broad range of cluster sizes in the experiment. Still, there is good qualitative agreement between the experimental and the simulated mass spectra exhibiting reaction products with masses between those of the C16H10- monomer and dimer in both cases. Additional studies of the influence of the projectile charge and mass is planned as well as simulations on longer time scales and as functions of cluster size. read less NOT USED (low confidence) I. Tejada, L. Brochard, G. Stoltz, F. Legoll, T. Lelièvre, and É. Cancès, “Combining a reactive potential with a harmonic approximation for molecular dynamics simulation of failure: construction of a reduced potential,” Journal of Physics: Conference Series. 2015. link Times cited: 3 Abstract: Molecular dynamics is a simulation technique that can be use… read moreAbstract: Molecular dynamics is a simulation technique that can be used to study failure in solids, provided the inter-atomic potential energy is able to account for the complex mechanisms at failure. Reactive potentials fitted on ab initio results or on experimental values have the ability to adapt to any complex atomic arrangement and, therefore, are suited to simulate failure. But the complexity of these potentials, together with the size of the systems considered, make simulations computationally expensive. In order to improve the efficiency of numerical simulations, simpler harmonic potentials can be used instead of complex reactive potentials in the regions where the system is close to its ground state and a harmonic approximation reasonably fits the actual reactive potential. However the validity and precision of such an approach has not been investigated in detail yet. We present here a methodology for constructing a reduced potential and combining it with the reactive one. We also report some important features of crack propagation that may be affected by the coupling of reactive and reduced potentials. As an illustrative case, we model a crystalline two-dimensional material (graphene) with a reactive empirical bond-order potential (REBO) or with harmonic potentials made of bond and angle springs that are designed to reproduce the second order approximation of REBO in the ground state. We analyze the consistency of this approximation by comparing the mechanical behavior and the phonon spectra of systems modeled with these potentials. These tests reveal when the anharmonicity effects appear. As anharmonic effects originate from strain, stress or temperature, the latter quantities are the basis for establishing coupling criteria for on the fly substitution in large simulations. read less NOT USED (low confidence) J. Larentzos, B. Rice, E. Byrd, N. S. Weingarten, and J. Lill, “Parameterizing complex reactive force fields using multiple objective evolutionary strategies (MOES). Part 1: ReaxFF models for cyclotrimethylene trinitramine (RDX) and 1,1-diamino-2,2-dinitroethene (FOX-7).,” Journal of chemical theory and computation. 2015. link Times cited: 42 Abstract: ReaxFF (van Duin, A.C.T.; Dasgupta, S.; Lorant, F.; Goddard,… read moreAbstract: ReaxFF (van Duin, A.C.T.; Dasgupta, S.; Lorant, F.; Goddard, W.A. J. Phys. Chem. A, 2001, 105, 9396-9409) reactive potentials are parametrized for cyclotrimethylene trinitramine (RDX) and 1,1-diamino-2,2-dinitroethene (FOX-7) in a novel application combining data envelopment analysis and a modern self-adaptive evolutionary algorithm to optimize multiple objectives simultaneously and map the entire family of solutions. In order to correct the poor crystallographic parameters predicted by ReaxFF using its base parametrization (Strachan, A.; van Duin, A. C. T.; Chakraborty, D.; Dasgupta S.; Goddard, W. A. Phys. Rev. Lett., 2003, 91, 098301), we augmented the existing training set data used for parametrization with additional (SAPT)DFT calculations of RDX and FOX-7 dimer interactions. By adjusting a small subset of the ReaxFF parameters that govern long-range interactions, the evolutionary algorithm approach converges on a family of solutions that best describe crystallographic parameters through simultaneous optimization of the objective functions. Molecular dynamics calculations of RDX and FOX-7 are conducted to assess the quality of the force fields, resulting in parametrizations that improve the overall prediction of the crystal structures. read less NOT USED (low confidence) H. Barzegar et al., “C₆₀/collapsed carbon nanotube hybrids: a variant of peapods.,” Nano letters. 2015. link Times cited: 25 Abstract: We examine a variant of so-called carbon nanotube peapods by… read moreAbstract: We examine a variant of so-called carbon nanotube peapods by packing C60 molecules inside the open edge ducts of collapsed carbon nanotubes. C60 insertion is accomplished through a facile single-step solution-based process. Theoretical modeling is used to evaluate favorable low-energy structural configurations. Overfilling of the collapsed tubes allows infiltration of C60 over the full cross-section of the tubes and consequent partial or complete reinflation, yielding few-wall, large diameter cylindrical nanotubes packed with crystalline C60 solid cores. read less NOT USED (low confidence) Y. Kuang and B. Huang, “Effects of covalent functionalization on the thermal transport in carbon nanotube/polymer composites: A multi-scale investigation,” Polymer. 2015. link Times cited: 44 NOT USED (low confidence) T. Chang, H. Zhang, Z. Guo, X. Guo, and H. Gao, “Nanoscale directional motion towards regions of stiffness.,” Physical review letters. 2015. link Times cited: 62 Abstract: How to induce nanoscale directional motion via some intrinsi… read moreAbstract: How to induce nanoscale directional motion via some intrinsic mechanisms pertaining to a nanosystem remains a challenge in nanotechnology. Here we show via molecular dynamics simulations that there exists a fundamental driving force for a nanoscale object to move from a region of lower stiffness toward one of higher stiffness on a substrate. Such nanoscale directional motion is induced by the difference in effective van der Waals potential energy due to the variation in stiffness of the substrate; i.e., all other conditions being equal, a nanoscale object on a stiffer substrate has lower van der Waals potential energy. This fundamental law of nanoscale directional motion could lead to promising routes for nanoscale actuation and energy conversion. read less NOT USED (low confidence) G.-D. Lee, E. Yoon, K. He, A. Robertson, and J. Warner, “Detailed formation processes of stable dislocations in graphene.,” Nanoscale. 2014. link Times cited: 24 Abstract: We use time-dependent HRTEM to reveal that stable dislocatio… read moreAbstract: We use time-dependent HRTEM to reveal that stable dislocation pairs in graphene are formed from an initial complex multi-vacancy cluster that undergoes multiple bond rotations and adatom incorporation. In the process, it is found that the transformation from the formed complex multi-vacancy cluster can proceed without the increase of vacancy because many atoms and dimers are not only evaporated but also actively adsorbed. In tight-binding molecular dynamics simulations, it is confirmed that adatoms play an important role in the reconstruction of non-hexagonal rings into hexagonal rings. From density functional theory calculations, it is also found from simulations that there is a favorable distance between two dislocations pointing away from each other (i.e. formed from atom loss). For dislocation pairs pointing away from each other, the hillock-basin structure is more stable than the hillock-hillock structure for dislocation pairs pointing away from each other (i.e. formed from atom loss). read less NOT USED (low confidence) S. Sahoo, V. R. Chitturi, R. Agarwal, J.-W. Jiang, and R. Katiyar, “Thermal conductivity of freestanding single wall carbon nanotube sheet by Raman spectroscopy.,” ACS applied materials & interfaces. 2014. link Times cited: 51 Abstract: Thermal properties of single wall carbon nanotube sheets (SW… read moreAbstract: Thermal properties of single wall carbon nanotube sheets (SWCNT-sheets) are of significant importance in the area of thermal management, as an isolated SWCNT possesses high thermal conductivity of the value about 3000 W m(-1) K(-1). Here we report an indirect method of estimating the thermal conductivity of a nanometer thick suspended SWCNT-sheet by employing the Raman scattering technique. Tube diameter size is examined by the transmissions electron microscopy study. The Raman analysis of the radial breathing modes predicts narrow diameter size distribution with achiral (armchair) symmetry of the constituent SWCNTs. From the first order temperature coefficient of the A1g mode of the G band along with the laser power dependent frequency shifting of this mode, the thermal conductivity of the suspended SWCNT-sheet is estimated to be about ∼18.3 W m(-1) K(-1). Our theoretical study shows that the thermal conductivity of the SWCNT-sheet has contributions simultaneously from the intratube and intertube thermal transport. The intertube thermal conductivity (with contributions from the van der Waals interaction) is merely around 0.7 W m(-1) K(-1), which is three orders smaller than the intratube thermal conductivity, leading to an abrupt decrease in the thermal conductivity of the SWCNT-sheet as compared to the reported value for isolated SWCNT. read less NOT USED (low confidence) B. Czerwinski and A. Delcorte, “Chemistry and sputtering induced by fullerene and argon clusters in carbon‐based materials,” Surface and Interface Analysis. 2014. link Times cited: 5 Abstract: Classical MD computer simulations are used as a tool for the… read moreAbstract: Classical MD computer simulations are used as a tool for the theoretical investigation of the processes initiated in carbon‐based materials by the irradiation with C60 and Arn clusters. This paper shows the comparison of data regarding the chemical reactions occurring in polystyrene and fullerite bombarded by C60 and Arn projectiles with the initial energy of 2.5 and 10 keV. Its main focus is to elucidate the influence of material type on the bond breaking as new bond formation processes induced by impinging cluster projectiles. Copyright © 2014 John Wiley & Sons, Ltd. read less NOT USED (low confidence) C. Daniels, Z. Bullard, E. C. Girão, and V. Meunier, “Emergent magnetism in irradiated graphene nanostructures,” Carbon. 2014. link Times cited: 6 NOT USED (low confidence) A. Wilmes and S. Pinho, “A coupled mechanical‐charge/dipole molecular dynamics finite element method, with multi‐scale applications to the design of graphene nano‐devices,” International Journal for Numerical Methods in Engineering. 2014. link Times cited: 8 Abstract: A new Molecular Dynamics Finite Element Method (MDFEM) with … read moreAbstract: A new Molecular Dynamics Finite Element Method (MDFEM) with a coupled mechanical‐charge/dipole formulation is proposed. The equilibrium equations of Molecular Dynamics (MD) are embedded exactly within the computationally more favourable Finite Element Method (FEM). This MDFEM can readily implement any force field because the constitutive relations are explicitly uncoupled from the corresponding geometric element topologies. This formal uncoupling allows to differentiate between chemical‐constitutive, geometric and mixed‐mode instabilities. Different force fields, including bond‐order reactive and polarisable fluctuating charge–dipole potentials, are implemented exactly in both explicit and implicit dynamic commercial finite element code. The implicit formulation allows for larger length and time scales and more varied eigenvalue‐based solution strategies. read less NOT USED (low confidence) Z. Qin, M. D. R. Taylor, M. Hwang, K. Bertoldi, and M. Buehler, “Effect of wrinkles on the surface area of graphene: toward the design of nanoelectronics.,” Nano letters. 2014. link Times cited: 85 Abstract: Graphene has attracted intense attention to the use in extre… read moreAbstract: Graphene has attracted intense attention to the use in extreme applications. However, its small thickness facilitates wrinkle formation, and it is not clear how such structural change affects its area-specific capacitance. Herein, we combine molecular dynamics and continuum mechanics-based simulations to study the changes in surface area induced by wrinkles. We find that the high specific surface area of graphene can only be affected up to 2% regardless of loading conditions, geometry, and defects. read less NOT USED (low confidence) Y. Liu, H. Yang, N. Liao, and P. Yang, “Investigation on thermal conductivity of bilayer graphene nanoribbons,” RSC Advances. 2014. link Times cited: 18 Abstract: We investigated the thermal conductivity of bilayer graphene… read moreAbstract: We investigated the thermal conductivity of bilayer graphene nanoribbons (BGNs) using nonequilibrium molecular dynamics method (NEMD). The relationships among thermal conductivity, different ways of stacking, size, interfacial temperature and edge shape were studied. Two different stacking ways for BGNs are AA-stacked type and AB-stacked type. The results show that the thermal conductivities of AA-stacked BGNs are slightly higher than those of AB-stacked BGNs under the same simulation conditions because of different crystal structures. The thermal conductivity of zigzag BGNs (ZBGNs) first increases and then decreases with increasing width. However, the thermal conductivity of armchair BGNs (ABGNs) monotonously increases with increasing width. The thermal conductivity of BGNs increases with the length of the simulation system. In addition BGNs show temperature dependence and edge-shape dependence for thermal conductivity. We have explained the simulation results by the inter-layer phonon coupling and the phonon scattering, which have been shown to significantly affect the thermal conductivity of BGNs. The systematic analysis of thermal conductivity of BGNs did not only help to obtain conclusions regarding the achievable thermal performance, but also provided the possibility to design different dimensional BGNs for different BGNs-based thermal and microelectronic components. read less NOT USED (low confidence) X.-Y. Sun, R. Wu, R. Xia, and Y. Xu, “Blister formation in graphene coating on the nanoparticle decorated copper surface,” RSC Advances. 2014. link Times cited: 3 Abstract: Embedded nanoparticles between a graphene coating and substr… read moreAbstract: Embedded nanoparticles between a graphene coating and substrate often precipitate blisters generated in graphene, which may impede the application of graphene as a surface coating. Molecular dynamics (MD) simulations are performed to analyze the evolution of nanocoating morphology during the process of adhering the graphene onto a nanoparticle decorated metal surface. The simulation reveals that for a deformable nanoparticle, a blister rudiment with a tail formed and then changes into an irregular blister, but a rigid nanoparticle will be ejected from the surface of the substrate without any blistering. Substrate damage caused by the nanoparticles during coating is also analyzed. It is found that hexagonal close-packed atoms emerge from the contact point between the rigid particle and substrate. Understanding how blisters form in graphene coatings by an atomic-scale approach will help this promising material function more effectively and widely. read less NOT USED (low confidence) M. Cho and S. Yang, “Multiscale Modeling of Polymer–Nanotube Nanocomposites.” 2014. link Times cited: 3 NOT USED (low confidence) X. Yang, L. Wang, Y. Huang, Z. Han, and A. To, “Carbon nanotube-fullerene hybrid nanostructures by C₆₀ bombardment: formation and mechanical behavior.,” Physical chemistry chemical physics : PCCP. 2014. link Times cited: 15 Abstract: This study reports the investigation on C60 bombardment on t… read moreAbstract: This study reports the investigation on C60 bombardment on the carbon nanotube (CNT) by molecular dynamic (MD) simulations. We found that carbon nanotube nanobuds or nanotube-fullerene hybrid nanostructures can be formed by C60 bombardment. Different from the nanobuds in earlier studies, more structural patterns are found in the bombardment formed nanobuds and nanotube-fullerene hybrid nanostructures. In addition, the attaching strengths of the carbon nanobuds are explored, and results indicate that the junction between C60 and CNTs in the nanobuds is very stable. Moreover, we also found that the bombardment formed nanobuds and nanotube-fullerene hybrid nanostructures generally decrease the maximum tensile strength and Young's modulus of carbon nanotubes. read less NOT USED (low confidence) A. L. de Lima, L. A. M. Müssnich, T. M. Manhabosco, H. Chacham, R. J. Batista, and A. B. Oliveira, “Soliton instability and fold formation in laterally compressed graphene,” Nanotechnology. 2014. link Times cited: 12 Abstract: We investigate—through simulations and analytical calculatio… read moreAbstract: We investigate—through simulations and analytical calculations—the consequences of uniaxial lateral compression applied to the upper layer of multilayer graphene. The simulations of compressed graphene show that strains larger than 2.8% induce soliton-like deformations that further develop into large, mobile folds. Such folds were indeed experimentally observed in graphene and other solid lubricants two-dimensional (2D) materials. Interestingly, in the soliton-fold regime, the shear stress decreases with the strain s, initially as s − 2 / 3 ?> and rapidly going to zero. Such instability is consistent with the recently observed negative dynamic compressibility of 2D materials. We also predict that the curvatures of the soliton-folds are given by r c = δ β / 2 &agr; , ?> where 1 ≤ δ ≤ 2 , ?> and β and α are respectively related to the layer bending modulus and to the interlayer binding energy of the material. This finding might allow experimental estimates of the β / &agr; ?> ratio of 2D materials from fold morphology. read less NOT USED (low confidence) A. Delcorte, V. Cristaudo, V. Lebec, and B. Czerwinski, “Sputtering of polymers by keV clusters: Microscopic views of the molecular dynamics,” International Journal of Mass Spectrometry. 2014. link Times cited: 23 NOT USED (low confidence) R. Rahman and J. Foster, “Bridging the length scales through nonlocal hierarchical multiscale modeling scheme,” Computational Materials Science. 2014. link Times cited: 15 NOT USED (low confidence) F. Castro-Marcano, M. F. Russo, A. Duin, and J. Mathews, “Pyrolysis of a large-scale molecular model for Illinois no. 6 coal using the ReaxFF reactive force field,” Journal of Analytical and Applied Pyrolysis. 2014. link Times cited: 122 NOT USED (low confidence) J. Huang and C. Wong, “Thickness, chirality and pattern dependence of elastic properties of hydrogen functionalized graphene,” Computational Materials Science. 2014. link Times cited: 7 NOT USED (low confidence) J. Baimova, B. Liu, S. Dmitriev, N. Srikanth, and K. Zhou, “Mechanical properties of bulk carbon nanostructures: effect of loading and temperature.,” Physical chemistry chemical physics : PCCP. 2014. link Times cited: 45 Abstract: Carbon-based bulk nanostructures are believed to entail cert… read moreAbstract: Carbon-based bulk nanostructures are believed to entail certain advantages over their parent low-dimensional materials and are promising candidates for supercapacitors due to their unique properties such as extremely high specific surface area and high conductivity. Herein the mechanical and structural properties of four types of carbon nanopolymorph-based nanomaterials were calculated using molecular dynamics simulations. Bulk carbon nanostructures composed of structural units of bent graphene flakes, short carbon nanotubes, fullerenes and their mixture were considered. The effect of the loading scheme and temperature was studied and constitutive relationships describing the deformation of the materials were given. The simulation results revealed that the effect of the loading scheme significantly depends on the type of structural units, and was slightly affected by the temperature especially for high densities. The constitutive equations obtained in this work can be applied to describe the mechanical behavior of new bulk carbon nanostructures. read less NOT USED (low confidence) M. He et al., “Precise determination of the threshold diameter for a single-walled carbon nanotube to collapse.,” ACS nano. 2014. link Times cited: 39 Abstract: Closed-edged bilayer graphene nanoribbons were formed by the… read moreAbstract: Closed-edged bilayer graphene nanoribbons were formed by the spontaneous collapse of large-diameter single-walled carbon nanotubes (SWNTs) grown on gold nanoparticles by chemical vapor deposition. Such bilayer graphene nanoribbons could adopt different stacking configurations, such as AB-stacking or stacking order with any rotation angle, correlated with the chiral angles of their parent rounded SWNTs. On the basis of the electron diffraction characterizations on a good number of collapsed and uncollapsed SWNTs, the threshold diameter for SWNTs to collapse was precisely determined to be 5.1 nm, independent of the chiral angle of the SWNTs. The determination is consistent with that calculated by both classical adaptive intermolecular reactive empirical bond order force field and density functional theory after having taken the stacking effect and thermal fluctuation into account. read less NOT USED (low confidence) K. Kwan and S. W. Cranford, “‘Unsticking’ and exposing the surface area of graphene bilayers via randomly distributed nanoparticles,” Chemical Physics Letters. 2014. link Times cited: 4 NOT USED (low confidence) Y. Zhao et al., “Self-adaptive strain-relaxation optimization for high-energy lithium storage material through crumpling of graphene,” Nature Communications. 2014. link Times cited: 136 NOT USED (low confidence) Y. Xiang and H. S. Shen, “Tension buckling of graphene: A new phenotype,” Solid State Communications. 2014. link Times cited: 8 NOT USED (low confidence) A. Farimani, K. Min, and N. Aluru, “DNA base detection using a single-layer MoS2.,” ACS nano. 2014. link Times cited: 283 Abstract: Nanopore-based DNA sequencing has led to fast and high-resol… read moreAbstract: Nanopore-based DNA sequencing has led to fast and high-resolution recognition and detection of DNA bases. Solid-state and biological nanopores have low signal-to-noise ratio (SNR) (< 10) and are generally too thick (> 5 nm) to be able to read at single-base resolution. A nanopore in graphene, a 2-D material with sub-nanometer thickness, has a SNR of ∼3 under DNA ionic current. In this report, using atomistic and quantum simulations, we find that a single-layer MoS2 is an extraordinary material (with a SNR > 15) for DNA sequencing by two competing technologies (i.e., nanopore and nanochannel). A MoS2 nanopore shows four distinct ionic current signals for single-nucleobase detection with low noise. In addition, a single-layer MoS2 shows a characteristic change/response in the total density of states for each base. The band gap of MoS2 is significantly changed compared to other nanomaterials (e.g., graphene, h-BN, and silicon nanowire) when bases are placed on top of the pristine MoS2 and armchair MoS2 nanoribbon, thus making MoS2 a promising material for base detection via transverse current tunneling measurement. MoS2 nanopore benefits from a craftable pore architecture (combination of Mo and S atoms at the edge) which can be engineered to obtain the optimum sequencing signals. read less NOT USED (low confidence) D. Nugawela, S. Stuart, and J. Jakowski, “Highly Energetic Collisions of Xe with Fullerene Clusters,” Extreme Science and Engineering Discovery Environment. 2014. link Times cited: 0 Abstract: One subset of the fullerene activities is collision experime… read moreAbstract: One subset of the fullerene activities is collision experiments using high energetic inert gases with fullerene clusters. We report on the formation of fullerene oligomers upto (C60)m, m=2-12 following the collisions of 200 keV and 400 keV Xe with (C60)55 fullerene clusters using classical reactive dynamics. A preference for C60+n (n=1-4) fragments was observed after the collision. The sequence of peaks detected in the range C105 - C122 after 1 ns from the collision is comparable with the experimental results. According to the post collisional dynamics, a dimer formed with one cross-link between two fullerenes led to a peanut shaped molecule after 25 ns and a linear trimer has turned into a carbon nanotube like structure after 43 ns. At the ns time scale, more organized carbon molecules as well as big amorphous carbon chunks also remained as collisional products. read less NOT USED (low confidence) X. Meng, M. Li, Y. Xing, and Z. Bai, “A MECHANICAL MODEL FOR SELF-ASSEMBLED GRAPHENE AROUND NANOTUBE,” International Journal of Applied Mechanics. 2014. link Times cited: 11 Abstract: In this paper, a theoretical model based on the finite defor… read moreAbstract: In this paper, a theoretical model based on the finite deformation beam theory is established to study the self-assembled behavior of graphene around a nanotube due to the van der Waals interactions. The morphology of graphene, governed by the nanotube diameter, is quantitatively determined by using the energy minimization approach in the theoretical model. From present results, it is demonstrated that the morphology of graphene predicted by the theoretical model agrees well with those obtained in molecular dynamics simulations. Furthermore, the influence of nanotube diameter, the binding energy and bending rigidity on the morphology of graphene has been investigated. It is found that the nanotube diameter has remarkable effect on the morphology of graphene while the morphology has tiny change with the change of binding energy. We hope that the present results offer the guideline in design of nanoelectronics based on graphene. read less NOT USED (low confidence) Y. Cheng, T. Liang, J. A. Martinez, S. Phillpot, and S. Sinnott, “A charge optimized many-body potential for titanium nitride (TiN),” Journal of Physics: Condensed Matter. 2014. link Times cited: 17 Abstract: This work presents a new empirical, variable charge potentia… read moreAbstract: This work presents a new empirical, variable charge potential for TiN systems in the charge-optimized many-body potential framework. The potential parameters were determined by fitting them to experimental data for the enthalpy of formation, lattice parameters, and elastic constants of rocksalt structured TiN. The potential does a good job of describing the fundamental physical properties (defect formation and surface energies) of TiN relative to the predictions of first-principles calculations. This potential is used in classical molecular dynamics simulations to examine the interface of fcc-Ti(0 0 1)/TiN(0 0 1) and to characterize the adsorption of oxygen atoms and molecules on the TiN(0 0 1) surface. The results indicate that the potential is well suited to model TiN thin films and to explore the chemistry associated with their oxidation. read less NOT USED (low confidence) T. Zhang, X. Li, and H. Gao, “Defects controlled wrinkling and topological design in graphene,” Journal of The Mechanics and Physics of Solids. 2014. link Times cited: 130 NOT USED (low confidence) A. Erdemir and J. Luo, “Guest editorial: Special issue on superlubricity,” Friction. 2014. link Times cited: 4 NOT USED (low confidence) J. Eapen, K. Murty, and T. Burchell, “Understanding Creep Mechanisms in Graphite with Experiments, Multiscale Simulations, and Modeling.” 2014. link Times cited: 0 Abstract: Disordering mechanisms in graphite have a long history with … read moreAbstract: Disordering mechanisms in graphite have a long history with conflicting viewpoints. Using Raman and x-ray photon spectroscopy, electron microscopy, x-ray diffraction experiments and atomistic modeling and simulations, the current project has developed a fundamental understanding of early-to-late state radiation damage mechanisms in nuclear reactor grade graphite (NBG-18 and PCEA). We show that the topological defects in graphite play an important role under neutron and ion irradiation. read less NOT USED (low confidence) Z. Sha, Q. Pei, Z. Liu, V. Shenoy, and Y.-W. Zhang, “Is the failure of large-area polycrystalline graphene notch sensitive or insensitive?,” Carbon. 2014. link Times cited: 42 NOT USED (low confidence) H. Yang, Y. Tang, Y. Liu, X.-gang Yu, and P. Yang, “Thermal conductivity of graphene nanoribbons with defects and nitrogen doping,” Reactive & Functional Polymers. 2014. link Times cited: 30 NOT USED (low confidence) B. Costescu and F. Gräter, “Graphene mechanics: II. Atomic stress distribution during indentation until rupture.,” Physical chemistry chemical physics : PCCP. 2014. link Times cited: 18 Abstract: Previous Atomic Force Microscopy (AFM) experiments found sin… read moreAbstract: Previous Atomic Force Microscopy (AFM) experiments found single layers of defect-free graphene to rupture at unexpectedly high loads in the micronewton range. Using molecular dynamics simulations, we modeled an AFM spherical tip pressing on a circular graphene sheet and studied the stress distribution during the indentation process until rupture. We found the graphene rupture force to have no dependency on the sheet size and a very weak dependency on the indenter velocity, allowing a direct comparison to experiment. The deformation showed a non-linear elastic behavior, with a two-dimensional elastic modulus in good agreement with previous experimental and computational studies. In line with theoretical predictions for linearly elastic sheets, rupture forces of non-linearly elastic graphene are proportional to the tip radius. However, as a deviation from the theory, the atomic stress concentrates under the indenter tip more strongly than predicted and causes a high probability of bond breaking only in this area. In turn, stress levels decrease rapidly towards the edge of the sheet, most of which thus only serves the role of mechanical support for the region under the indenter. As a consequence, the high ratio between graphene sheets and sphere radii, hitherto supposed to be necessary for reliable deformation and rupture studies, could be reduced to a factor of only 5-10 without affecting the outcome. Our study suggests time-resolved analysis of forces at the atomic level as a valuable tool to predict and interpret the nano-scale response of stressed materials beyond graphene. read less NOT USED (low confidence) B. Costescu, I. Baldus, and F. Gräter, “Graphene mechanics: I. Efficient first principles based Morse potential.,” Physical chemistry chemical physics : PCCP. 2014. link Times cited: 11 Abstract: We present a computationally efficient pairwise potential fo… read moreAbstract: We present a computationally efficient pairwise potential for use in molecular dynamics simulations of large graphene or carbon nanotube systems, in particular, for those under mechanical deformation, and also for mixed systems including biomolecules. Based on the Morse potential, it is only slightly more complex and computationally expensive than a harmonic bond potential, allowing such large or mixed simulations to reach experimentally relevant time scales. By fitting to data obtained from quantum mechanics (QM) calculations to represent bond breaking in graphene patches, we obtain a dissociation energy of 805 kJ mol(-1) which reflects the steepness of the QM potential up to the inflection point. A distinctive feature of our potential is its truncation at the inflection point, allowing a realistic treatment of ruptured C-C bonds without relying on a bond order model. The results obtained from equilibrium MD simulations using our potential compare favorably with results obtained from experiments and from similar simulations with more complex and computationally expensive potentials. read less NOT USED (low confidence) J. Zhao, L.-xin Lu, and T. Rabczuk, “Binding energy and mechanical stability of single- and multi-walled carbon nanotube serpentines.,” The Journal of chemical physics. 2014. link Times cited: 16 Abstract: Recently, Geblinger et al. [Nat. Nanotechnol. 3, 195 (2008)]… read moreAbstract: Recently, Geblinger et al. [Nat. Nanotechnol. 3, 195 (2008)] and Machado et al. [Phys. Rev. Lett. 110, 105502 (2013)] reported the experimental and molecular dynamics realization of S-like shaped single-walled carbon nanotubes (CNTs), the so-called CNT serpentines. We reported here results from continuum modeling of the binding energy γ between different single- and multi-walled CNT serpentines and substrates as well as the mechanical stability of the CNT serpentine formation. The critical length for the mechanical stability and adhesion of different CNT serpentines are determined in dependence of EiIi, d, and γ, where EiIi and d are the CNT bending stiffness and distance of the CNT translation period. Our continuum model is validated by comparing its solution to full-atom molecular dynamics calculations. The derived analytical solutions are of great importance for understanding the interaction mechanism between different single- and multi-walled CNT serpentines and substrates. read less NOT USED (low confidence) G. Brunetto and D. Galvão, “Graphene-like Membranes: From Impermeable to Selective Sieves,” arXiv: Mesoscale and Nanoscale Physics. 2014. link Times cited: 2 Abstract: Recently, it was proposed that graphene membranes could act … read moreAbstract: Recently, it was proposed that graphene membranes could act as impermeable atomic structures to standard gases. For some other applications, a higher level of porosity is needed, and the so-called Porous Graphene (PG) and Biphenylene Carbon (BPC) membranes are good candidates to effectively work as selective sieves. In this work we have used classical molecular dynamics simulations to study the dynamics of membrane permeation of He and Ar atoms and possible selectivity effects. For the graphene membranes we did not observe any leakage through the membrane and/or membrane/substrate interface until a critical pressure limit, then a sudden membrane detachment occurs. PG and BPC membranes are not impermeable as graphene ones, but there are significant energy barriers to diffusion depending on the atom type. Our results show that this kind of porous membranes can be effectively used as selective sieves for pure and mixtures of gases. read less NOT USED (low confidence) S. Goel, “The current understanding on the diamond machining of silicon carbide,” Journal of Physics D: Applied Physics. 2014. link Times cited: 139 Abstract: The Glenn Research Centre of NASA, USA (www.grc.nasa.gov/WWW… read moreAbstract: The Glenn Research Centre of NASA, USA (www.grc.nasa.gov/WWW/SiC/, silicon carbide electronics) is in pursuit of realizing bulk manufacturing of silicon carbide (SiC), specifically by mechanical means. Single point diamond turning (SPDT) technology which employs diamond (the hardest naturally-occurring material realized to date) as a cutting tool to cut a workpiece is a highly productive manufacturing process. However, machining SiC using SPDT is a complex process and, while several experimental and analytical studies presented to date aid in the understanding of several critical processes of machining SiC, the current knowledge on the ductile behaviour of SiC is still sparse. This is due to a number of simultaneously occurring physical phenomena that may take place on multiple length and time scales. For example, nucleation of dislocation can take place at small inclusions that are of a few atoms in size and once nucleated, the interaction of these nucleations can manifest stresses on the micrometre length scales. The understanding of how these stresses manifest during fracture in the brittle range, or dislocations/phase transformations in the ductile range, is crucial to understanding the brittle–ductile transition in SiC. Furthermore, there is a need to incorporate an appropriate simulation-based approach in the manufacturing research on SiC, owing primarily to the number of uncertainties in the current experimental research that includes wear of the cutting tool, poor controllability of the nano-regime machining scale (effective thickness of cut), and coolant effects (interfacial phenomena between the tool, workpiece/chip and coolant), etc. In this review, these two problems are combined together to posit an improved understanding on the current theoretical knowledge on the SPDT of SiC obtained from molecular dynamics simulation. read less NOT USED (low confidence) M. Ren, J. Liu, L. Wang, and Q. Zheng, “Anomalous elastic buckling of hexagonal layered crystalline materials in the absence of structure slenderness,” arXiv: Materials Science. 2014. link Times cited: 23 NOT USED (low confidence) K. Nordlund, C. Björkas, T. Ahlgren, A. Lasa, and A. Sand, “Multiscale modelling of plasma–wall interactions in fusion reactor conditions,” Journal of Physics D: Applied Physics. 2014. link Times cited: 58 Abstract: The interaction of fusion reactor plasma with the material o… read moreAbstract: The interaction of fusion reactor plasma with the material of the first wall involves a complex multitude of interlinked physical and chemical effects. Hence, modern theoretical treatment of it relies to a large extent on multiscale modelling, i.e. using different kinds of simulation approaches suitable for different length and time scales in connection with each other. In this review article, we overview briefly the physics and chemistry of plasma–wall interactions in tokamak-like fusion reactors, and present some of the most commonly used material simulation approaches relevant for the topic. We also give summaries of recent multiscale modelling studies of the effects of fusion plasma on the modification of the materials of the first wall, especially on swift chemical sputtering, mixed material formation and hydrogen isotope retention in tungsten. read less NOT USED (low confidence) L. Zhu and B. Li, “Low thermal conductivity in ultrathin carbon nanotube (2, 1),” Scientific Reports. 2014. link Times cited: 35 NOT USED (low confidence) S. Ekesan, S. Kale, and J. Herzfeld, “Transferable pseudoclassical electrons for aufbau of atomic ions,” Journal of Computational Chemistry. 2014. link Times cited: 12 Abstract: Generalizing the LEWIS reactive force field from electron pa… read moreAbstract: Generalizing the LEWIS reactive force field from electron pairs to single electrons, we present LEWIS• in which explicit valence electrons interact with each other and with nuclear cores via pairwise interactions. The valence electrons are independently mobile particles, following classical equations of motion according to potentials modified from Coulombic as required to capture quantum characteristics. As proof of principle, the aufbau of atomic ions is described for diverse main group elements from the first three rows of the periodic table, using a single potential for interactions between electrons of like spin and another for electrons of unlike spin. The electrons of each spin are found to distribute themselves in a fashion akin to the major lobes of the hybrid atomic orbitals, suggesting a pointillist description of the electron density. The broader validity of the LEWIS• force field is illustrated by predicting the vibrational frequencies of diatomic and triatomic hydrogen species. © 2014 Wiley Periodicals, Inc. read less NOT USED (low confidence) K. McDonell, G. Proust, and L. Shen, “Morphology of Irradiated Adjacent Single-Walled Carbon Nanotubes,” Applied Mechanics and Materials. 2014. link Times cited: 0 Abstract: Molecular dynamics was used to simulate the electron irradia… read moreAbstract: Molecular dynamics was used to simulate the electron irradiation of two adjacent single-walled carbon nanotubes (SWNTs) via the Primary Knock-on Approximation. Temperature effects on the creation and evolution of defects were studied. The most prevalent defect was atomic vacancy which evolved into multi-vacancy over successive irradiation impacts. Cross linking was also observed. As temperature increased, mending of damage was promoted and the stability of bonds decreased. A new morphology of cross linking in the form of interconnecting carbon rings is presented. read less NOT USED (low confidence) Y. Liang and Q. Han, “Prediction of the nonlocal scaling parameter for graphene sheet,” European Journal of Mechanics A-solids. 2014. link Times cited: 40 NOT USED (low confidence) S.-J. Guo, Q. Yang, X. He, and K. Liew, “Design of 3D carbon nanotube-based nanostructures and prediction of their extra-strong mechanical properties under tension and compression,” Computational Materials Science. 2014. link Times cited: 8 NOT USED (low confidence) Z. Budrikis, A. Sellerio, Z. Bertalan, and S. Zapperi, “Wrinkle motifs in thin films,” Scientific Reports. 2014. link Times cited: 15 NOT USED (low confidence) R. Qiao, Q. Wang, and Y. Liu, “Abnormal transport properties of Argon confined in carbon nanotube driven by a temperature gradient,” Chemical Physics Letters. 2014. link Times cited: 1 NOT USED (low confidence) A. Sgouros, M. Sigalas, K. Papagelis, G. Kalosakas, and G. Kalosakas, “Transforming graphene nanoribbons into nanotubes by use of point defects,” Journal of Physics: Condensed Matter. 2014. link Times cited: 11 Abstract: Using molecular dynamics simulations with semi-empirical pot… read moreAbstract: Using molecular dynamics simulations with semi-empirical potentials, we demonstrate a method to fabricate carbon nanotubes (CNTs) from graphene nanoribbons (GNRs), by periodically inserting appropriate structural defects into the GNR crystal structure. We have found that various defect types initiate the bending of GNRs and eventually lead to the formation of CNTs. All kinds of carbon nanotubes (armchair, zigzag, chiral) can be produced with this method. The structural characteristics of the resulting CNTs, and the dependence on the different type and distribution of the defects, were examined. The smallest (largest) CNT obtained had a diameter of ∼5 Å (∼39 Å). Proper manipulation of ribbon edges controls the chirality of the CNTs formed. Finally, the effect of randomly distributed defects on the ability of GNRs to transform into CNTs is considered. read less NOT USED (low confidence) Y. Huang, S. Zhu, and T. Li, “Line defects guided molecular patterning on graphene,” Applied Physics Letters. 2014. link Times cited: 5 Abstract: Graphene emerges as a candidate scaffold for patterning mole… read moreAbstract: Graphene emerges as a candidate scaffold for patterning molecules. Despite existing progresses, it still remains unclear how to achieve molecular self-assembly in domains of desirable geometry. We reveal a barrier effect of line defects (e.g., open slits) in graphene, which can potentially enable molecular confining and patterning in a domain of desirable geometry. Using molecular dynamics simulations, we demonstrate that fullerene molecules can be readily patterned into a stable cluster of various shapes and sizes. Such a strategy is expected to be applicable to pattern various types of molecules that interact with graphene via van der Waals force. read less NOT USED (low confidence) C. Carpenter et al., “Elastic properties of graphene nanomeshes,” Applied Physics Letters. 2014. link Times cited: 41 Abstract: We study the elastic response of graphene nanomeshes based o… read moreAbstract: We study the elastic response of graphene nanomeshes based on molecular-statics and molecular-dynamics simulations of uniaxial tensile deformation tests. Elastic properties are determined as a function of the nanomesh architecture, namely, the lattice arrangement of the pores, pore morphology, material density (ρ), and pore edge passivation, and scaling laws for the density dependence of the elastic modulus M, M(ρ), are established. We find that, for circular unpassivated pores, M scales with the square of ρ. Deviations from quadratic scaling are most strongly influenced by pore morphology and, to a lesser extent, by pore edge passivation and temperature. read less NOT USED (low confidence) Y. Dong, Y. He, Y. Wang, and H. Li, “A theoretical study of ripple propagation in defective graphene,” Carbon. 2014. link Times cited: 22 NOT USED (low confidence) Z. Ye, H. Moon, M. H. Lee, and A. Martini, “Size and load dependence of nanoscale electric contact resistance,” Tribology International. 2014. link Times cited: 12 NOT USED (low confidence) Y. Liu, G. F. Zhou, L. He, and H. Ye, “Studying the rotation induced super-lattices on graphite using a type-criterion potential based molecular dynamics method,” Computational Materials Science. 2014. link Times cited: 0 NOT USED (low confidence) E. Penev, V. Artyukhov, and B. Yakobson, “Extensive energy landscape sampling of nanotube end-caps reveals no chiral-angle bias for their nucleation.,” ACS nano. 2014. link Times cited: 30 Abstract: In the formation of a carbon nanotube (CNT) nucleus, a hemis… read moreAbstract: In the formation of a carbon nanotube (CNT) nucleus, a hemispherical fullerene end-cap, a specific pattern of six pentagons encodes what unique (n,m) chirality a nascent CNT would inherit, with many possible pentagon patterns corresponding to a single chirality. This configurational variety and its potential role in the initial stages of CNT catalytic growth remain essentially unexplored. Here we present large-scale calculations designed to evaluate the intrinsic energies of all possible CNT caps for selected chiralities corresponding to tube diameters d ≲ 1 nm. Our quantitative analysis reveals that for all chiral angles χ the energy scale variability associated with the CNT caps is small, compared to that of the CNT/catalyst interface. Such a flat energy landscape cannot therefore be a dominant factor for chiral distribution and lends further credibility to interface-controlled scenarios for selective growth of single-walled CNT of desired chirality. read less NOT USED (low confidence) S. R. Sklan, P. Greaney, and J. Grossman, “Resonant behavior in heat transfer across weak molecular interfaces,” Journal of Applied Physics. 2013. link Times cited: 1 Abstract: Molecular dynamics (MD) simulations are used to study, in de… read moreAbstract: Molecular dynamics (MD) simulations are used to study, in detail, the transfer of thermal (vibrational) energy between objects with discrete vibrational spectra to those with a semi-continuum of spectra. The transfer of energy is stochastic and strongly dependent on the instantaneous separation between the bodies. The insight from the MD simulations can be captured with a simple classical model that agrees well with quantum models. This model can be used to optimize systems for efficient frequency selective energy transfer, which can be used in designing a chemical sensor through nanomechanical resonance spectroscopy. read less NOT USED (low confidence) C. Liu, J. Wang, W. Chen, Z. Wei, J. Yang, and Y. Chen, “Interfacial Thermal Conductance Between Carbon Nanotubes From Nonequilibrium Green’s Function Method.” 2013. link Times cited: 1 Abstract: In this paper, the interfacial thermal conductance between t… read moreAbstract: In this paper, the interfacial thermal conductance between two single-wall carbon nanotubes (SWCNTs) is evaluated using the nonequilibrium Green’s function (NEGF) method. The calculation results show that, for offset parallel contact type, interfacial thermal conductance increases almost linearly with the overlap length. This is because the coupling atom number in overlap region is the main contributor to heat flow through interface. With the same overlap length, interfacial thermal conductance of the nested contact type is much higher than that of the offset parallel contact type. By comparing the phonon transmission function between the two contact types, it is found that the nested contact type has much larger transmission function than the offset parallel contact type due to more atoms involving in the interfacial coupling in the overlap region. By adjusting the chirality of SWCNTs in the offset parallel contact type, it is found that the difference of phonon spectrum can reduce interfacial thermal transfer. We also find the transmission function profiles with only different overlap length are quite similar, that is, changing in the overlap length will not change the phonon transmission probability at the interface. Moreover, acoustic phonon is the main contributor to the interfacial thermal conductance and the radical breathing mode is the vital mode of coupling modes for CNT-CNT system. The calculated results in this paper indicate that increasing the coupling atom number between CNTs would increase the heat energy transfer in CNT-based composites.Copyright © 2013 by ASME read less NOT USED (low confidence) W. M. Brown and M. Yamada, “Implementing molecular dynamics on hybrid high performance computers - Three-body potentials,” Comput. Phys. Commun. 2013. link Times cited: 106 NOT USED (low confidence) L. Li, M. Xu, W. Song, A. Ovcharenko, G. Zhang, and D. Jia, “The effect of empirical potential functions on modeling of amorphous carbon using molecular dynamics method,” Applied Surface Science. 2013. link Times cited: 55 NOT USED (low confidence) Y. Chen et al., “Mechanical properties investigation of graphene coated with Ni,” 2013 IEEE 15th Electronics Packaging Technology Conference (EPTC 2013). 2013. link Times cited: 1 Abstract: This work investigated mechanical behaviors of graphene and … read moreAbstract: This work investigated mechanical behaviors of graphene and graphene coated with Ni (graphene-Ni) by using molecular dynamics (MD) method. By performing the MD simulation for uniaxial tension simulations, it could be noted that the graphene is more unstable than graphene-Ni at the same temperature from the result of molecular dynamics simulation for two models. It is observed that nickel atoms coated on the surface of graphene can increase the critical stress of graphene. As well, the young's modulus of graphene is much lower than graphene-Ni. Two different models of graphene and grapheme-Ni were analyzed at 200K, 300K, 500K, 700K and 1000K respectively in order to understand the effect of temperature. read less NOT USED (low confidence) Z. Qin and M. Buehler, “Bioinspired Graphene Nanogut,” Journal of Applied Mechanics. 2013. link Times cited: 4 NOT USED (low confidence) Y. Ni, Y. Chalopin, and S. Volz, “Few layer graphene based superlattices as efficient thermal insulators,” Applied Physics Letters. 2013. link Times cited: 18 Abstract: While graphene and few layer graphene (FLG) are considered a… read moreAbstract: While graphene and few layer graphene (FLG) are considered as having the highest thermal conductivity in their in-plane directions, our molecular dynamics (MD) simulations however show that those systems are also characterized by a superior thermal contact resistance, which could be largely tuned with the layer number when in contact with a silica substrate. Taking advantages of such a resistive interface, MD simulations show that SiO2/FLG superlattices have a thermal conductivity as low as 0.30 W/m K, exhibiting a promising prospect in nano-scale thermal insulation. These findings pave the way for an improved thermal management of nanoscale systems such as thermal barrier coatings and phase change memory materials with atomic-scale super-insulators. read less NOT USED (low confidence) F. Pavia and W. Curtin, “Molecular modeling of cracks at interfaces in nanoceramic composites,” Journal of The Mechanics and Physics of Solids. 2013. link Times cited: 13 NOT USED (low confidence) Y. Dong, X. Wu, and A. Martini, “Atomic roughness enhanced friction on hydrogenated graphene,” Nanotechnology. 2013. link Times cited: 90 Abstract: Atomic friction on hydrogenated graphene is investigated usi… read moreAbstract: Atomic friction on hydrogenated graphene is investigated using molecular dynamics simulations. Hydrogenation is found to increase friction significantly, and the atomic-level information provided by the simulations reveals that atomic roughness induced by hydrogenation is the primary cause of the friction enhancement. Other proposed mechanisms, specifically adhesion and rigidity, are excluded based on the simulation results and analyses performed using the Prandtl–Tomlinson model. In addition, it is found that friction does not monotonically increase with hydrogen coverage on the graphene surface; instead, a maximum friction is observed at a hydrogen coverage between 5 and 10%. read less NOT USED (low confidence) P. Koskinen, “Bending-induced delamination of van der Waals solids,” Journal of Physics: Condensed Matter. 2013. link Times cited: 19 Abstract: Although sheets of layered van der Waals solids offer great … read moreAbstract: Although sheets of layered van der Waals solids offer great opportunities to custom-design nanomaterial properties, their weak interlayer adhesion challenges structural stability against mechanical deformation. Here, bending-induced delamination of multilayer sheets is investigated by molecular dynamics simulations, using graphene as an archetypal van der Waals solid. The simulations show that delamination of a graphene sheet occurs when its radius of curvature decreases roughly below Rc = 5.3 nm × (number of layers)3/2 and that, as a rule, one-third of the layers get delaminated. These clear results are explained by a general and transparent model, a useful future reference for guiding the design of nanostructured van der Waals solids. read less NOT USED (low confidence) T. Liang et al., “Classical atomistic simulations of surfaces and heterogeneous interfaces with the charge-optimized many body (COMB) potentials,” Materials Science & Engineering R-reports. 2013. link Times cited: 207 NOT USED (low confidence) C. Tang, T. Oppenheim, V. Tung, and A. Martini, “Structure-stability relationships for graphene-wrapped fullerene-coated carbon nanotubes,” Carbon. 2013. link Times cited: 15 NOT USED (low confidence) C. Chen, L. Shen, M. Ma, J. Z. Liu, and Q. Zheng, “Brownian motion-induced water slip inside carbon nanotubes,” Microfluidics and Nanofluidics. 2013. link Times cited: 0 NOT USED (low confidence) Z.-L. Li et al., “What are grain boundary structures in graphene?,” Nanoscale. 2013. link Times cited: 30 Abstract: We have developed a new global optimization method for the d… read moreAbstract: We have developed a new global optimization method for the determination of the interface structure based on the differential evolution algorithm. Here, we applied this method to search for the ground state atomic structures of the grain boundary (GB) between armchair and zigzag oriented graphene. We find two new grain boundary structures with a considerably lower formation energy of about 1 eV nm(-1) than those of the previously widely used structural models. We also systematically investigate the symmetric GBs with the GB angle ranging from 0° to 60°, and find some new GB structures. Surprisingly, for an intermediate GB angle, the formation energy does not depend monotonically on the defect concentration. We also discovered an interesting linear relationship between the GB density and the GB angle. Our new method provides an important novel route for the determination of GB structures and other interface structures, and our comprehensive study on GB structures could provide new structural information and guidelines to this area. read less NOT USED (low confidence) H. Babaei, P. Keblinski, and J. Khodadadi, “Improvement in thermal conductivity of paraffin by adding high aspect-ratio carbon-based nano-fillers,” Physics Letters A. 2013. link Times cited: 69 NOT USED (low confidence) Y. Ni, Y. Chalopin, and S. Volz, “Significant thickness dependence of the thermal resistance between few layer graphenes,” Applied Physics Letters. 2013. link Times cited: 36 Abstract: The inter-layer resistance in few layer graphene (FLG) is an… read moreAbstract: The inter-layer resistance in few layer graphene (FLG) is an unknown intrinsic property that affects the heat removal efficiency of FLG-based thermal devices. Here we present data that demonstrates the layer number dependence of the resistance between FLGs, by using molecular dynamics simulations. The resistance was found to decrease as the layer number increases. FLGs with larger thicknesses are proposed to be advantageous in heat spreading owing to their lower contact resistances. The observed properties do not depend on temperature, which is crucial for FLG based structures to retain a stable heat removal efficiency while working at a large temperature range. read less NOT USED (low confidence) X. Mi and Y. Shi, “Topological defects in nanoporous carbon,” Carbon. 2013. link Times cited: 8 NOT USED (low confidence) Y. Wu and N. Aluru, “Graphitic carbon-water nonbonded interaction parameters.,” The journal of physical chemistry. B. 2013. link Times cited: 139 Abstract: In this study, we develop graphitic carbon-water nonbonded i… read moreAbstract: In this study, we develop graphitic carbon-water nonbonded interaction parameters entirely from ab initio calculation data of interaction energies between graphene and a single water molecule. First, we employ the Møller-Plesset perturbation theory of the second order (MP2) method to compute the polycyclic aromatic hydrocarbon (PAH)-water interaction energies, with proper size of basis sets and energy component analysis to extrapolate to infinite-sized graphene limit. Then, we develop graphitic carbon-water interaction parameters based on the MP2 data from this work and the ab initio data available in the literature from other methods such as random-phase approximation (RPA), density functional theory-symmetry-adapted perturbation theory (DFT-SAPT), and coupled cluster treatment with single and double excitations and perturbative triples (CCSD(T)). The accuracy of the interaction parameters is evaluated by predicting water contact angle on graphite and carbon nanotube (CNT) radial breathing mode (RBM) frequency shift and comparing them with experimental data. The interaction parameters obtained from MP2 data predict the CNT RBM frequency shift that is in good agreement with experiments. The interaction parameters obtained from RPA and DFT-SAPT data predict the contact angles and the CNT RBM frequency shift that agree well with experiments. The interaction parameters obtained from CCSD(T) data underestimate the contact angles and overestimate the CNT RBM frequency shift probably due to the use of small basis sets in CCSD(T) calculations. read less NOT USED (low confidence) H. Babaei, P. Keblinski, and J. Khodadadi, “Molecular Dynamics Study of the Interfacial Thermal Conductance at the Graphene/Paraffin Interface in Solid and Liquid Phases.” 2013. link Times cited: 0 Abstract: By utilizing molecular dynamics (MD) simulations, we study t… read moreAbstract: By utilizing molecular dynamics (MD) simulations, we study the interfacial thermal conductance at the interface of graphene and paraffin. In doing so, we conduct non-equilibrium heat source and sink simulations on systems of parallel and perpendicular configurations in which the heat flow is parallel and perpendicular to the surface of graphene, respectively. For the perpendicular configuration, graphene with different number of layers are considered. The results show that the interfacial thermal conductance decreases with the number of layers and converges to a value which is equal to the obtained conductance by using the parallel configuration. We also study the conductance for the solid phase paraffin. The results indicate that solid paraffin-graphene interfaces have higher conductance values with respect to the corresponding liquid phase systems.Copyright © 2013 by ASME read less NOT USED (low confidence) T. Liang et al., “Reactive Potentials for Advanced Atomistic Simulations,” Materials Research-ibero-american Journal of Materials. 2013. link Times cited: 180 Abstract: This article reviews recent advances in the development of r… read moreAbstract: This article reviews recent advances in the development of reactive empirical force fields or potentials. In particular, we compare two widely used reactive potentials with variable-charge schemes that are desirable for multicomponent or multifunctional systems: the ReaxFF (reactive force field) and charge-optimized many-body (COMB) potentials. Several applications of these approaches in atomistic simulations that involve metal-based heterogeneous systems are also discussed. read less NOT USED (low confidence) P. Wang, W. Gao, Z. Cao, K. Liechti, and R. Huang, “Numerical Analysis of Circular Graphene Bubbles,” Journal of Applied Mechanics. 2013. link Times cited: 63 Abstract: Pressurized graphene bubbles have been observed in experimen… read moreAbstract: Pressurized graphene bubbles have been observed in experiments, which can be used to determine the mechanical and adhesive properties of graphene. A nonlinear plate theory is adapted to describe the deformation of a graphene monolayer subject to lateral loads, where the bending moduli of monolayer graphene are independent of the in-plane Young's modulus and Poisson's ratio. A numerical method is developed to solve the nonlinear equations for circular graphene bubbles, and the results are compared to approximate solutions by analytical methods. Molecular dynamics simulations of nanoscale graphene bubbles are performed, and it is found that the continuum plate theory is suitable only within the limit of linear elasticity. Moreover, the effect of van der Waals interactions between graphene and its underlying substrate is analyzed, including large-scale interaction for nanoscale graphene bubbles subject to relatively low pressures. read less NOT USED (low confidence) C. Dong, W. Zhu, S. Zhao, P. Wang, H. Wang, and W. Yang, “Evolution of Pt Clusters on Graphene Induced by Electron Irradiation,” Journal of Applied Mechanics. 2013. link Times cited: 8 Abstract: In situ low-voltage transmission electron microscopy (TEM) w… read moreAbstract: In situ low-voltage transmission electron microscopy (TEM) was performed to study the evolution of small Pt clusters on suspended graphene. Pt clusters, trapped by the edge of holes, generally take a stable shape of truncated octahedron for sizes ranging from sub-1 to � 5nm. The interaction to the graphene dots takes in charge when they form composite nanostructures embedded in graphene. The Pt clusters are slowly flattened due to hole enlargement under electron irradiation. The planar structure is maintained by the peripheral Pt-C bonds and instantly collapses into a three-dimensional (3D) cluster if one side is detached from the edge. Based on the heat transfer model, the thermal effect can be excluded under the experimental condition. Atomistic evolution can be attributed to the electron irradiation. Molecular dynamics simulations revealed that the evolution kinetics was found to be dominated by the surface diffusion (characterized by the migration barrier Em), the temperature (the thermal activation energy � 5kBT), and the scattering from electrons (the maximum transferred energy Emax). The corresponding energies are comparable for the Pt cluster system, leading to similar evolution behaviors. A different scenario in graphene systems is due to the large difference in agitations, i.e., Emax � Em � 5kBT at 3000K. This unique behavior comes from TEM observation, implying that electron beam irradiation can be utilized as a unique tool in shaping carbon nanostructures. [DOI: 10.1115/1.4024168] read less NOT USED (low confidence) C. Carpenter, D. Maroudas, and A. Ramasubramaniam, “Mechanical properties of irradiated single-layer graphene,” Applied Physics Letters. 2013. link Times cited: 61 Abstract: The mechanical properties of irradiated single-layer graphen… read moreAbstract: The mechanical properties of irradiated single-layer graphene sheets are determined as a function of inserted vacancy concentration. We find that the vacancy-induced crystalline-to-amorphous transition is accompanied by a brittle-to-ductile transition in the failure response of irradiated graphene sheets for inserted vacancy concentrations of 8%–12%. While point defects and larger voids appreciably degrade the strength of pristine graphene, we find that even heavily damaged samples (∼20% vacancies) exhibit tensile strengths of ∼30 GPa, in significant excess of those typical of engineering materials. Our results suggest that defect engineering of graphene is feasible without incurring a complete loss of its desirable mechanical properties. read less NOT USED (low confidence) M. Luo, Z. Zhang, and B. Yakobson, “Tunable Gigahertz Oscillators of Gliding Incommensurate Bilayer Graphene Sheets,” Journal of Applied Mechanics. 2013. link Times cited: 9 Abstract: Oscillators composed of incommensurate graphene sheets have … read moreAbstract: Oscillators composed of incommensurate graphene sheets have been investigated by molecular dynamics simulations. The oscillation frequencies can reach tens of gigahertz range and depend on the surface energy of the bilayer graphene and the oscillatory amplitude. We demonstrate the tunability of such an oscillator in terms of frequency and friction by its varying geometric parameters. Exploration of the damping mechanism by combining the autocorrelation function theory and the direct atomistic simulations reveals that the friction force is proportional to the velocity of oscillatory motion. The results should help optimize the design of graphene-based nanoelectromechanical devices. read less NOT USED (low confidence) M. Hu and D. Poulikakos, “Graphene mediated thermal resistance reduction at strongly coupled interfaces,” International Journal of Heat and Mass Transfer. 2013. link Times cited: 56 NOT USED (low confidence) Q. Yin and X. Shi, “Mechanics of rolling of nanoribbon on tube and sphere.,” Nanoscale. 2013. link Times cited: 16 Abstract: The configuration of graphene nano-ribbon (GNR) assembly on … read moreAbstract: The configuration of graphene nano-ribbon (GNR) assembly on carbon nanotube (CNT) and sphere is studied through theoretical modeling and molecular simulation. The GNR can spontaneously wind onto the CNT due to van der Waals (vdW) interaction and form two basic configurations: helix and scroll. The final configuration arises from the competition among three energy terms: the bending energy of the GNR, the vdW interaction between GNR and CNT, the vdW between the GNR itself. We derive analytical solutions by accounting for the three energy parts, with which we draw phase diagrams and predict the final configuration (helix or scroll) based on the selected parameters. The molecular simulations are conducted to verify the model with the results agree well with the model predicted. Our work can be used to actively control and transfer the tube-like nanoparticles and viruses as well as to assemble ribbon-like nanomaterials. read less NOT USED (low confidence) O. Ezekoye, M. Hurley, J. Torero, and K. McGrattan, “Applications of Heat Transfer Fundamentals to Fire Modeling,” Journal of Thermal Science and Engineering Applications. 2013. link Times cited: 4 Abstract: The fire industry relies on fire engineers and scientists to… read moreAbstract: The fire industry relies on fire engineers and scientists to develop materials and technologies used to either resist, detect, or suppress fire. While combustion processes are the drivers for what might be considered to be fire phenomena, it is heat transfer physics that mediate how fire spreads. Much of the knowledge of fire phenomena has been encapsulated and exercised in fire modeling software tools. Over the past 30 years, participants in the fire industry have begun to use fire modeling tools to aid in decision making associated with design and analysis. In the rest of this paper we will discuss what the drivers have been for the growth of fire modeling tools; the types of submodels incorporated into such tools; the role of model verification, validation, and uncertainty propagation in these tools; and possible futures for these types of tools to best meet the requirements of the user community. Throughout this discussion, we identify how heat transfer research has supported and aided the advancement of fire modeling. read less NOT USED (low confidence) Z. Qi, D. Bahamon, V. M. Pereira, H. S. Park, D. Campbell, and A. Neto, “Resonant tunneling in graphene pseudomagnetic quantum dots.,” Nano letters. 2013. link Times cited: 36 Abstract: Realistic relaxed configurations of triaxially strained grap… read moreAbstract: Realistic relaxed configurations of triaxially strained graphene quantum dots are obtained from unbiased atomistic mechanical simulations. The local electronic structure and quantum transport characteristics of y-junctions based on such dots are studied, revealing that the quasi-uniform pseudomagnetic field induced by strain restricts transport to Landau level- and edge state-assisted resonant tunneling. Valley degeneracy is broken in the presence of an external field, allowing the selective filtering of the valley and chirality of the states assisting in the resonant tunneling. Asymmetric strain conditions can be explored to select the exit channel of the y-junction. read less NOT USED (low confidence) Y. Jing, L. Guo, Y. Sun, J. Shen, and N. Aluru, “Mechanical properties of a silicon nanofilm covered with defective graphene,” Surface Science. 2013. link Times cited: 9 NOT USED (low confidence) D. Duffy, “Energy Generation: Nuclear Energy.” 2013. link Times cited: 0 NOT USED (low confidence) A. Delcorte, O. A. Restrepo-Gutiérrez, and B. Czerwinski, “Cluster SIMS of organic materials: Theoretical insights.” 2013. link Times cited: 5 NOT USED (low confidence) K. Elkhodary, S. Tang, and W. K. Liu, “Inclusion clusters in the archetype-blending continuum theory.” 2013. link Times cited: 13 Abstract: In this chapter, we will present a contemporary review of th… read moreAbstract: In this chapter, we will present a contemporary review of the hitherto numerical characterization of nanowires (NWs). The bulk of the research reported in the literatures concern metallic NWs including Al, Cu, Au, Ag, Ni, and their alloys NWs. Research has also been reported for the investigation of some nonmetallic NWs, such as ZnO, GaN, SiC, SiO2. A plenty of researches have been conducted regarding the numerical investigation of NWs. Issues analyzed include structural changes under different loading situations, the formation and propagation of dislocations, and the effect of the magnitude of applied loading on deformation mechanics. Efforts have also been made to correlate simulation results with experimental measurements. However, direct comparisons are difficult since most simulations are carried out under conditions of extremely high strain/loading rates and small simulation samples due to computational limitations. Despite of the immense numerical studies of NWs, a significant work still lies ahead in terms of problem formulation, interpretation of results, identification and delineation of deformation mechanisms, and constitutive characterization of behavior. In this chapter, we present an introduction of the commonly adopted experimental and numerical approaches in studies of the deformation of NWs in Section 1. An overview of findings concerning perfect NWs under different loading situations, such as tension, compression, torsion, and bending are presented in Section 2. In Section 3, we will detail some recent results from the authors’ own work with an emphasis on the study of influences from different pre-existing defect on NWs. Some thoughts on future directions of the computational mechanics of NWs together with Conclusions will be given in the last section. read less NOT USED (low confidence) H. S. Shen, Y.-M. Xu, and C.-li Zhang, “Graphene: Why buckling occurs?,” Applied Physics Letters. 2013. link Times cited: 15 Abstract: We report here the buckling phenomenon of a monolayer graphe… read moreAbstract: We report here the buckling phenomenon of a monolayer graphene with four free edges subjected to uniaxial tension by molecular dynamics simulations. We find that the buckling occurs when tension force is applied and is sufficiently large for both armchair and zigzag single layer graphene sheets. The maximum amplitude is increased and the maximum wavelength is decreased with increase in temperature. read less NOT USED (low confidence) Y. Kinoshita, M. Murashima, M. Kawachi, and N. Ohno, “First-principles study of mechanical properties of one-dimensional carbon nanotube intramolecular junctions,” Computational Materials Science. 2013. link Times cited: 25 NOT USED (low confidence) A. K. Singh and R. Hennig, “Scaling relation for thermal ripples in single and multilayer graphene,” Physical Review B. 2013. link Times cited: 23 NOT USED (low confidence) H. S. Park and M. Devel, “Multiscale, Multiphysics Modeling of Electromechanical Coupling in Surface‐Dominated Nanostructures.” 2013. link Times cited: 1 NOT USED (low confidence) G. Wagner, “1. Atomistic-to-Continuum Coupling Methods for Heat Transfer in Solids.” 2013. link Times cited: 0 NOT USED (low confidence) B. Faria, N. Silvestre, and J. Lopes, “Induced anisotropy of chiral carbon nanotubes under combined tension-twisting,” Mechanics of Materials. 2013. link Times cited: 19 NOT USED (low confidence) O. Glukhova, I. N. Saliy, A. Kolesnikova, E. Kossovich, and M. Slepchenkov, “Carbon nanotube+graphene quantum dots complex for biomedical applications,” Biomedical optics. 2013. link Times cited: 2 Abstract: Different types of carbon nanotube + graphene quantum dot co… read moreAbstract: Different types of carbon nanotube + graphene quantum dot composites were investigated. Stable configuration of carbon nanotube + graphene quantum dot composites with the van der Waals and the chemical interactions were established. It was shown that a peapod + graphene quantum dot (GQD) composite is a stable configuration at the chemical interaction. Investigation of the stability were performed by means of the empirical method based on Brenner's potential. The ionization potential of the peapod + GQD composite decreases by 0.5% in comparison with the ionization potential of the hollow nanotubes. read less NOT USED (low confidence) T. Jacobs and R. Carpick, “Nanoscale wear as a stress-assisted chemical reaction.,” Nature nanotechnology. 2013. link Times cited: 281 NOT USED (low confidence) K. Du, Y. Tang, J. Zhang, F. Xu, Y. Yan, and T. Sun, “Velocity-dependent Nanoscratching of Amorphous Polystyrene,” Current Nanoscience. 2013. link Times cited: 9 NOT USED (low confidence) B. Faria, N. Silvestre, and J. Lopes, “Tension–twisting dependent kinematics of chiral CNTs,” Composites Science and Technology. 2013. link Times cited: 22 NOT USED (low confidence) S. W. Cranford, “Buckling induced delamination of graphene composites through hybrid molecular modeling,” Applied Physics Letters. 2013. link Times cited: 17 Abstract: The efficiency of graphene-based composites relies on mechan… read moreAbstract: The efficiency of graphene-based composites relies on mechanical stability and cooperativity, whereby separation of layers (i.e., delamination) can severely hinder performance. Here we study buckling induced delamination of mono- and bilayer graphene-based composites, utilizing a hybrid full atomistic and coarse-grained molecular dynamics approach. The coarse-grain model allows exploration of an idealized model material to facilitate parametric variation beyond any particular molecular structure. Through theoretical and simulation analyses, we show a critical delamination condition, where ΔD∝kL4, where ΔD is the change in bending stiffness (eV), k the stiffness of adhesion (eV/A4), and L the length of the adhered section (A). read less NOT USED (low confidence) H. Heinz, T.-J. Lin, R. K. Mishra, and F. Emami, “Thermodynamically consistent force fields for the assembly of inorganic, organic, and biological nanostructures: the INTERFACE force field.,” Langmuir : the ACS journal of surfaces and colloids. 2013. link Times cited: 635 Abstract: The complexity of the molecular recognition and assembly of … read moreAbstract: The complexity of the molecular recognition and assembly of biotic-abiotic interfaces on a scale of 1 to 1000 nm can be understood more effectively using simulation tools along with laboratory instrumentation. We discuss the current capabilities and limitations of atomistic force fields and explain a strategy to obtain dependable parameters for inorganic compounds that has been developed and tested over the past decade. Parameter developments include several silicates, aluminates, metals, oxides, sulfates, and apatites that are summarized in what we call the INTERFACE force field. The INTERFACE force field operates as an extension of common harmonic force fields (PCFF, COMPASS, CHARMM, AMBER, GROMACS, and OPLS-AA) by employing the same functional form and combination rules to enable simulations of inorganic-organic and inorganic-biomolecular interfaces. The parametrization builds on an in-depth understanding of physical-chemical properties on the atomic scale to assign each parameter, especially atomic charges and van der Waals constants, as well as on the validation of macroscale physical-chemical properties for each compound in comparison to measurements. The approach eliminates large discrepancies between computed and measured bulk and surface properties of up to 2 orders of magnitude using other parametrization protocols and increases the transferability of the parameters by introducing thermodynamic consistency. As a result, a wide range of properties can be computed in quantitative agreement with experiment, including densities, surface energies, solid-water interface tensions, anisotropies of interfacial energies of different crystal facets, adsorption energies of biomolecules, and thermal and mechanical properties. Applications include insight into the assembly of inorganic-organic multiphase materials, the recognition of inorganic facets by biomolecules, growth and shape preferences of nanocrystals and nanoparticles, as well as thermal transitions and nanomechanics. Limitations and opportunities for further development are also described. read less NOT USED (low confidence) Z. Deng, N. Klimov, S. Solares, T. Li, H.-N. Xu, and R. Cannara, “Nanoscale interfacial friction and adhesion on supported versus suspended monolayer and multilayer graphene.,” Langmuir : the ACS journal of surfaces and colloids. 2013. link Times cited: 106 Abstract: Using atomic force microscopy (AFM), supported by semicontin… read moreAbstract: Using atomic force microscopy (AFM), supported by semicontinuum numerical simulations, we determine the effect of tip-subsurface van der Waals interactions on nanoscale friction and adhesion for suspended and silicon dioxide supported graphene of varying thickness. While pull-off force measurements reveal no layer number dependence for supported graphene, suspended graphene exhibits an increase in pull-off force with thickness. Further, at low applied loads, friction increases with increasing number of layers for suspended graphene, in contrast to reported trends for supported graphene. We attribute these results to a competition between local forces that determine the deformation of the surface layer, the profile of the membrane as a whole, and van der Waals forces between the AFM tip and subsurface layers. We find that friction on supported monolayer graphene can be fit using generalized continuum mechanics models, from which we extract the work of adhesion and interfacial shear strength. In addition, we show that tip-sample adhesive forces depend on interactions with subsurface material and increase in the presence of a supporting substrate or additional graphene layers. read less NOT USED (low confidence) J. Zang et al., “Multifunctionality and Control of the Crumpling and Unfolding of Large-Area Graphene,” Nature materials. 2012. link Times cited: 704 NOT USED (low confidence) M. Gupta, L. Chen, D. Estrada, A. Behnam, E. Pop, and S. Kumar, “Impact of thermal boundary conductances on power dissipation and electrical breakdown of carbon nanotube network transistors,” Journal of Applied Physics. 2012. link Times cited: 19 Abstract: estimate the average CNT-SiO2 TBC as g � 0.16Wm � 1 K � 1 an… read moreAbstract: estimate the average CNT-SiO2 TBC as g � 0.16Wm � 1 K � 1 and the TBC at CNT junctions as GC � 2.4 pWK � 1 . We find the peak power dissipation in CN-TFTs is more strongly correlated to the TBC of the CNT-substrate interface than to the TBC at CNT junctions. Molecular dynamics simulations of crossed CNT junctions also reveal that the top CNT is buckled over � 30nm lengths, losing direct contact with the substrate and creating highly localized hot-spots. Our results provide new insights into CNT network properties which can be engineered to enhance performance of CN-TFTs for macro and flexible electronics applications. V C 2012 American read less NOT USED (low confidence) K. Ran, X. Mi, Z. Shi, Q. Chen, Y. Shi, and J. Zuo, “Molecular packing of fullerenes inside single-walled carbon nanotubes,” Carbon. 2012. link Times cited: 10 NOT USED (low confidence) K. McDonell, G. Proust, and L. Shen, “Nanoengineering carbon nanotubes: The effects of electron irradiation on nanotube structure,” MRS Proceedings. 2012. link Times cited: 1 Abstract: A combined experimental and simulation approach into the imp… read moreAbstract: A combined experimental and simulation approach into the impacts of electron irradiation on carbon nanotube morphology was conducted. Single-walled nanotubes (SWCNTs) were irradiated using a JEOL Transmission Electron Microscope (TEM) using a range of accelerating voltages varying from 90keV to 200keV and temperatures between 300K and 800K with different exposure periods (order of minutes). The effects of irradiation were observed and characterised using electron microscopy and Raman spectroscopy. Specimens were observed prior to, during and following irradiation to discern any changes that occurred in SWCNTs as a result of irradiation. Raman spectroscopy was used to characterise the different allotropes of carbon present in irradiated and non-irradiated samples of SWCNTs. Experimental conditions were mimicked using molecular dynamics simulation. SWCNTs were irradiated under conditions equivalent to experimental electron beam intensity and specimen temperature using AIREBO [1,2] and Primary Knock-on (PKA) approximation [3]. The preliminary results indicate that electron beam intensity and temperature affect the type and frequency of modification to CNT structure. read less NOT USED (low confidence) Y. Zhang, Y. Cheng, Q. Pei, C. Wang, and Y. Xiang, “Thermal conductivity of defective graphene,” Physics Letters A. 2012. link Times cited: 101 NOT USED (low confidence) H. Zhou et al., “Nanoscale perturbations of room temperature ionic liquid structure at charged and uncharged interfaces.,” ACS nano. 2012. link Times cited: 145 Abstract: The nanoscale interactions of room temperature ionic liquids… read moreAbstract: The nanoscale interactions of room temperature ionic liquids (RTILs) at uncharged (graphene) and charged (muscovite mica) solid surfaces were evaluated with high resolution X-ray interface scattering and fully atomistic molecular dynamics simulations. At uncharged graphene surfaces, the imidazolium-based RTIL ([bmim(+)][Tf(2)N(-)]) exhibits a mixed cation/anion layering with a strong interfacial densification of the first RTIL layer. The first layer density observed via experiment is larger than that predicted by simulation and the apparent discrepancy can be understood with the inclusion of, dominantly, image charge and π-stacking interactions between the RTIL and the graphene sheet. In contrast, the RTIL structure adjacent to the charged mica surface exhibits an alternating cation-anion layering extending 3.5 nm into the bulk fluid. The associated charge density profile demonstrates a pronounced charge overscreening (i.e., excess first-layer counterions with respect to the adjacent surface charge), highlighting the critical role of charge-induced nanoscale correlations of the RTIL. These observations confirm key aspects of a predicted electric double layer structure from an analytical Landau-Ginzburg-type continuum theory incorporating ion correlation effects, and provide a new baseline for understanding the fundamental nanoscale response of RTILs at charged interfaces. read less NOT USED (low confidence) S. Zhao and J. Xue, “Tuning the band gap of bilayer graphene by ion implantation: Insight from computational studies,” Physical Review B. 2012. link Times cited: 24 NOT USED (low confidence) H. Dodziuk, T. Korona, E. Lomba, and C. Bores, “Carbon Nanotube Container: Complexes of C50H10 with Small Molecules.,” Journal of chemical theory and computation. 2012. link Times cited: 17 Abstract: The stability of complexes of a recently synthetized (Scott … read moreAbstract: The stability of complexes of a recently synthetized (Scott et al. J. Am. Chem. Soc.2011, 134, 107) opened nanocontainer C50H10 with several guest molecules, H2, N2, CO, HCN, H2O, CO2, CS2, H2S, C2H2, NH3, CH4, CH3CN, CH3OH, CH3CCH, 2-butyne, methyl halides, and with noble gas atoms, has been examined by means of symmetry-adapted perturbation theory of intermolecular interactions, which fully incorporates all important energy components, including a difficult dispersion term. All complexes under scrutiny have been found stable for all studied guests at 0 K, but entropic effects cause many of them to dissociate into constituent molecules under standard conditions. The estimation of temperature at which the Gibbs free energy ΔG = 0 revealed that the recently observed (Scott et al. J. Am. Chem. Soc.2011, 134, 107) complex CS2@C50H10 is the most stable at room temperature while the corresponding complexes with HCN and Xe guests should decompose at ca. 310 K and that with CO2 at room temperature (ca. 300 K). In agreement with the ΔG estimation, molecular dynamics simulations performed in vacuum for the CS2@C50H10 complex predicted that the complex is stable but decomposes at ca. 350 K. The MD simulations in CHCl3 solution showed that the presence of solvent stabilizes the CS2@C50H10 complex in comparison to vacuum. Thus, for the complexes obtained in solution the CO2 gas responsible for the greenhouse effect could be stored in the C50H10 nanotube. read less NOT USED (low confidence) T. Panczyk, P. Szabelski, and M. Drach, “Implicit solvent model for effective molecular dynamics simulations of systems composed of colloid nanoparticles and carbon nanotubes.,” Journal of colloid and interface science. 2012. link Times cited: 11 NOT USED (low confidence) N. Silvestre, B. Faria, and A. Duarte, “Multilevel approach for the local nanobuckling analysis of CNT-based composites.” 2012. link Times cited: 3 Abstract: In the present paper, a multilevel approach for the local na… read moreAbstract: In the present paper, a multilevel approach for the local nanobuckling analysis of carbon nanotube (CNT) based composite materials is proposed and described. The approach comprises four levels, all of them at nanoscale. The first level aims to propose the potential that describes the interatomic forces between carbon atoms. In the second level, molecular dynamics simulations are performed to extract the elastic properties of the CNT. The third level aims to determine the stiffness of the material that surrounds the CNT (matrix), using the annular membrane analysis. In the fourth level, finite strip analysis of the CNT elastically restrained by the matrix is performed to calculate the critical strain at which the CNT buckles locally. In order to achieve accurate results and take the CNT-matrix interaction into account, the and steps may be repeated iteratively until convergence is achieved. The proposed multilevel approach is applied to several CNTs embedded in a cylindrical representative volume element and illustrated in detail. It shows that (i) the interaction between the CNT and the matrix should be taken into account and (ii) the buckling at nanoscale is sensitive to several types of local buckling modes. read less NOT USED (low confidence) J. Yeo, Z. Liu, and T. Ng, “Comparing the effects of dispersed Stone–Thrower–Wales defects and double vacancies on the thermal conductivity of graphene nanoribbons,” Nanotechnology. 2012. link Times cited: 63 Abstract: Classical molecular dynamics with the AIREBO potential is us… read moreAbstract: Classical molecular dynamics with the AIREBO potential is used to investigate and compare the thermal conductivity of both zigzag and armchair graphene nanoribbons possessing various densities of Stone–Thrower–Wales (STW) and double vacancy defects, within a temperature range of 100–600 K. Our results indicate that the presence of both kinds of defects can decrease the thermal conductivity by more than 80% as defect densities are increased to 10% coverage, with the decrease at high defect densities being significantly higher in zigzag compared with armchair nanoribbons. Variations of thermal conductivity in armchair nanoribbons were similar for both kinds of defects, whereas double vacancies in the zigzag nanoribbons led to more significant decreases in thermal conductivity than STW defects. The same trends are observed across the entire temperature range tested. read less NOT USED (low confidence) Y. Wei, J. Wu, H. Yin, X. Shi, R. Yang, and M. Dresselhaus, “The nature of strength enhancement and weakening by pentagon-heptagon defects in graphene.,” Nature materials. 2012. link Times cited: 530 NOT USED (low confidence) B. D. Jensen, A. Bandyopadhyay, K. Wise, and G. Odegard, “Parametric Study of ReaxFF Simulation Parameters for Molecular Dynamics Modeling of Reactive Carbon Gases.,” Journal of chemical theory and computation. 2012. link Times cited: 35 Abstract: The development of innovative carbon-based materials can be … read moreAbstract: The development of innovative carbon-based materials can be greatly facilitated by molecular modeling techniques. Although the Reax Force Field (ReaxFF) can be used to simulate the chemical behavior of carbon-based systems, the simulation settings required for accurate predictions have not been fully explored. Using the ReaxFF, molecular dynamics (MD) simulations are used to simulate the chemical behavior of pure carbon and hydrocarbon reactive gases that are involved in the formation of carbon structures such as graphite, buckyballs, amorphous carbon, and carbon nanotubes. It is determined that the maximum simulation time step that can be used in MD simulations with the ReaxFF is dependent on the simulated temperature and selected parameter set, as are the predicted reaction rates. It is also determined that different carbon-based reactive gases react at different rates, and that the predicted equilibrium structures are generally the same for the different ReaxFF parameter sets, except in the case of the predicted formation of large graphitic structures with the Chenoweth parameter set under specific conditions. read less NOT USED (low confidence) H. Liao, F. Zhu, W. Zhang, Y. Chen, S. Song, and S. Liu, “Tensile behaviors investigation of SWCNT-Ni with vacancies.” 2012. link Times cited: 0 Abstract: In this work, the second-generation Brenner reactive empiric… read moreAbstract: In this work, the second-generation Brenner reactive empirical bond-order potential is adopted in a series of molecular dynamics simulation which investigate the mechanical properties under tensile loading of (6,6) armchair single-walled carbon nanotube(SWCNT) and single-walled carbon nanotube coated with nickel atoms(SWCNT-Ni). To assess the influence of temperature upon the mechanical properties of and SWCNT and SWCNT-Ni, the simulation process is repeated at a range of temperature at 300K, 500K and 700K, and the stress-strain curves are derived. At the same time, different scale vacancies of SWCNT-Ni including 0%, 0.42% and 0.83%, correspond to 0, 2 and 4 vacancies respectively, at 300K, 500K and 700K are also considered. Mechanical properties of SWCNT-Ni with vacancies including tensile strength and tensile failure strain are obtained. Meanwhile the failure stress and failure strain of SWCNT-Ni and SWCNT are compared at 300K, 500K and 700K. The results verify that tensile strength and tensile failure of all the three models would decrease with the temperature rising. When SWCNT is coated with nickel atoms, failure stress and failure strain would be reduced greatly. The vacancies would degrade the mechanical properties. In short, the mechanical properties are mainly dominated by three factors: the thermal fluctuation, the activity of carbon atoms with dangling bond and C-Ni interactions. read less NOT USED (low confidence) T. Guo, T. W. Ding, Q. Pei, and Y. Zhang, “Energy Dissipation Analysis of Defected Carbon Nanotube Oscillators.” 2012. link Times cited: 0 NOT USED (low confidence) J. A. Rodríguez-Manzo, A. Krasheninnikov, and F. Banhart, “Engineering the atomic structure of carbon nanotubes by a focused electron beam: new morphologies at the sub-nanometer scale.,” Chemphyschem : a European journal of chemical physics and physical chemistry. 2012. link Times cited: 19 Abstract: Carbon atoms are displaced in pre-selected locations of carb… read moreAbstract: Carbon atoms are displaced in pre-selected locations of carbon nanotubes by using a focused electron beam in a scanning transmission electron microscope. Sub-nanometer-sized holes are created that change the morphology of double and triple-walled carbon nanotubes and connect the shells in a unique way. By combining in situ transmission electron microscopy experiments with atomistic simulations, we study the bonding between defective shells in the new structures which are reminiscent of the shape of a flute. We demonstrate that in double-walled nanotubes the shells locally merge by forming nanoarches while atoms with dangling bonds can be preserved in triple-walled carbon nanotubes. In the latter system, nanoarches are formed between the inner- and outermost shells, shielding small graphenic islands with open edges between the neighboring shells. Our results indicate that arrays of quantum dots may be produced in carbon nanotubes by spatially localized electron irradiation, generating atoms with dangling bonds that may give rise to localized magnetic moments. read less NOT USED (low confidence) W. Zhu, H. Wang, and W. Yang, “Evolution of graphene nanoribbons under low-voltage electron irradiation.,” Nanoscale. 2012. link Times cited: 16 Abstract: Though the all-semiconducting nature of ultrathin graphene n… read moreAbstract: Though the all-semiconducting nature of ultrathin graphene nanoribbons (GNRs) has been demonstrated in field-effect transistors operated at room temperature with ∼10(5) on-off current ratios, the borderline for the potential of GNRs is still untouched. There remains a great challenge in fabricating even thinner GNRs with precise width, known edge configurations and specified crystallographic orientations. Unparalleled to other methods, low-voltage electron irradiation leads to a continuous reduction in width to a sub-nanometer range until the occurrence of structural instability. The underlying mechanisms have been investigated by the molecular dynamics method herein, combined with in situ aberration-corrected transmission electron microscopy and density functional theory calculations. The structural evolution reveals that the zigzag edges are dynamically more stable than the chiral ones. Preferential bond breaking induces atomic rings and dangling bonds as the initial defects. The defects grow, combine and reconstruct to complex edge structures. Dynamic recovery is enhanced by thermal activation, especially in cooperation with electron irradiation. Roughness develops under irradiation and reaches a plateau less than 1 nm for all edge configurations after longtime exposure. These features render low-voltage electron irradiation an attractive technique in the fabrication of ultrathin GNRs for exploring the ultimate electronic properties. read less NOT USED (low confidence) C. Pao, T.-H. Liu, C.-C. Chang, and D. Srolovitz, “Graphene defect polarity dynamics,” Carbon. 2012. link Times cited: 21 NOT USED (low confidence) M. Lan and H. Waisman, “Mechanics of SWCNT Aggregates Studied by Incremental Constrained Minimization,” Journal of Nanomechanics and Micromechanics. 2012. link Times cited: 6 Abstract: AbstractThe stress-strain behavior of short single-walled ca… read moreAbstract: AbstractThe stress-strain behavior of short single-walled carbon nanotube (SWCNT) aggregates is investigated by a novel incremental constrained minimization approach. An AIREBO potential is used to model the interactions within and between CNTs. The idea is to homogenously disperse SWCNTs in the computational cell at random positions and orientations following spherical uniform distributions, and incrementally deform the cell although restraining the movement of atoms at the ends of nanotubes. The stress-strain response of the system is obtained in each loading direction, and it is shown to converge to an isotropic behavior (a similar response in all directions) as the number of CNTs in the system increases. It is also shown that the Young’s modulus of the system increases linearly with the CNT aggregates density. Finally, the method is shown to agree well with results obtained from molecular dynamics simulations running at near zero degrees kelvin, however they are obtained at only a fraction of the CPU ... read less NOT USED (low confidence) A. Jaramillo-Botero, J. Tahir-Kheli, P. V. Allmen, and W. Goddard, “Multiscale, multiparadigm modeling for nano systems characterization and design.” 2012. link Times cited: 1 Abstract: This chapter outlines our progress toward developing a first… read moreAbstract: This chapter outlines our progress toward developing a first-principles-based hierarchical multiscale, multiparadigm modeling and simulation framework for the characterization and optimization of electronic and chemical properties of nanoscale materials and devices. In our approach, we build from the bottom-up by solving the quantum-mechanical (QM) Schrodinger equation for small systems. The results of these calculations lead to physical parameters that feed into methods capable of spanning longer length and time scale with minimum loss of accuracy. This is achieved by having higher-scale quantities self-consistently derived and optimized from the results at finer scales.
In contrast to other methods, we are strictly first-principles-based, and all of our parameters at all scales relate to physically measurable or QM-computable observables. Our approach that is applicable to the forward (materials phenomenology) and inverse (“materials by design”) problems. The inverse problem involves top-down predictions of structures and compositions at a lower scale from desired properties at a higher scale.
The advantages of our strategy over experimental- and phenomenological-based modeling and simulation approaches include the following: (1) providing access to details that are difficult or impossible to measure (e.g., excited electronic states in materials undergoing extreme conditions of pressure, temperature, etc.); (2) the ability to make useful predictions outside the range of experiments (i.e., since all calculations are ultimately related to first principles); and (3) providing sound, first-principles-based, steering for experiments. read less NOT USED (low confidence) J. Palmer and K. Gubbins, “Atomistic models for disordered nanoporous carbons using reactive force fields,” Microporous and Mesoporous Materials. 2012. link Times cited: 75 NOT USED (low confidence) Y. Long, J. Palmer, B. Coasne, M. Śliwińska-Bartkowiak, and K. Gubbins, “Under pressure: Quasi-high pressure effects in nanopores,” Microporous and Mesoporous Materials. 2012. link Times cited: 49 NOT USED (low confidence) B. Uberuaga, S. Stuart, W. Windl, M. Masquelier, and A. Voter, “Fullerene and graphene formation from carbon nanotube fragments,” Computational and Theoretical Chemistry. 2012. link Times cited: 13 NOT USED (low confidence) P. L. Theofanis, A. Jaramillo-Botero, W. Goddard, T. Mattsson, and A. Thompson, “Electron dynamics of shocked polyethylene crystal,” Physical Review B. 2012. link Times cited: 13 Abstract: Electron force field (eFF) wave-packet molecular-dynamics si… read moreAbstract: Electron force field (eFF) wave-packet molecular-dynamics simulations of the single shock Hugoniot are reported for a crystalline polyethylene (PE) model. The eFF results are in good agreement with previous density-functional theories and experimental data, which are available up to 80 GPa. We predict shock Hugoniots for PE up to 350 GPa. In addition, we analyze the structural transformations that occur due to heating. Our analysis includes ionization fraction, molecular decomposition, and electrical conductivity during isotropic compression. We find that above a compression of 2.4 g/cm^3, the PE structure transforms into an atomic fluid, leading to a sharp increase in electron ionization and a significant increase in system conductivity. eFF accurately reproduces shock pressures and temperatures for PE along the single shock Hugoniot. read less NOT USED (low confidence) A.-Y. Lu et al., “Decoupling of CVD graphene by controlled oxidation of recrystallized Cu,” RSC Advances. 2012. link Times cited: 83 Abstract: Large-area graphene grown by chemical vapour deposition (CVD… read moreAbstract: Large-area graphene grown by chemical vapour deposition (CVD) is promising for applications; however, the interaction between graphene and the substrate is still not well understood. In this report, we use a combination of two non-destructive characterization techniques, i.e., electron backscatter diffraction (EBSD) and Raman mapping to locally probe the interface between graphene and copper lattices without removing graphene. We conclude that the crystal structure of the Cu grains under graphene layers is governed by two competing processes: (1) graphene induced Cu surface reconstruction favoring the formation of Cu(100) orientation, and (2) recrystallization from bulk Cu favoring Cu(111) formation. The underlying Cu grains, regardless of reconstruction or recrystallization, induce a large hydrostatic compression to the graphene lattice. Interestingly, the strong interaction could be decoupled by allowing the intercalation of a thin cuprous oxide interfacial-layer. The Cu2O layer is mechanically and chemically weak; hence, graphene films can be detached and transferred to arbitrary substrates and the Cu substrates could be re-used for graphene growth. read less NOT USED (low confidence) A. Morelos-Gómez et al., “Clean nanotube unzipping by abrupt thermal expansion of molecular nitrogen: graphene nanoribbons with atomically smooth edges.,” ACS nano. 2012. link Times cited: 56 Abstract: We report a novel physicochemical route to produce highly cr… read moreAbstract: We report a novel physicochemical route to produce highly crystalline nitrogen-doped graphene nanoribbons. The technique consists of an abrupt N(2) gas expansion within the hollow core of nitrogen-doped multiwalled carbon nanotubes (CN(x)-MWNTs) when exposed to a fast thermal shock. The multiwalled nanotube unzipping mechanism is rationalized using molecular dynamics and density functional theory simulations, which highlight the importance of open-ended nanotubes in promoting the efficient introduction of N(2) molecules by capillary action within tubes and surface defects, thus triggering an efficient and atomically smooth unzipping. The so-produced nanoribbons could be few-layered (from graphene bilayer onward) and could exhibit both crystalline zigzag and armchair edges. In contrast to methods developed previously, our technique presents various advantages: (1) the tubes are not heavily oxidized; (2) the method yields sharp atomic edges within the resulting nanoribbons; (3) the technique could be scaled up for the bulk production of crystalline nanoribbons from available MWNT sources; and (4) this route could eventually be used to unzip other types of carbon nanotubes or intercalated layered materials such as BN, MoS(2), WS(2), etc. read less NOT USED (low confidence) F. Castro-Marcano, A. M. Kamat, M. F. Russo, A. Duin, and J. Mathews, “Combustion of an Illinois No. 6 coal char simulated using an atomistic char representation and the ReaxFF reactive force field,” Combustion and Flame. 2012. link Times cited: 297 NOT USED (low confidence) H. Zheng et al., “Enhanced thermoelectric performance of graphene nanoribbons,” Applied Physics Letters. 2012. link Times cited: 84 Abstract: The thermoelectric properties of a series of armchair and zi… read moreAbstract: The thermoelectric properties of a series of armchair and zigzag graphene nanoribbons with narrow width are examined using nonequilibrium Green function method and molecular dynamics simulations. It is found that these nanoribbons are rather stable when the edge atoms are passivated by hydrogen and those with armchair edges exhibit much better thermoelectric performance than their zigzag counterparts. Moreover, the corresponding ZT value increases with decreasing ribbon width. By optimizing the doping level, a room temperature ZT of 6.0 can be achieved for the narrowest armchair nanoribbon. The significantly enhanced ZT value makes armchair graphene nanoribbon a promising candidate for thermoelectric applications. read less NOT USED (low confidence) P. Dayal, S. Weyand, J. R. McNeish, and N. Mosey, “Temporal quantum mechanics/molecular mechanics: Extending the time scales accessible in molecular dynamics simulations of reactions,” Chemical Physics Letters. 2011. link Times cited: 11 NOT USED (low confidence) Y. Zhang, C. Wang, Y. Cheng, and Y. Xiang, “Mechanical properties of bilayer graphene sheets coupled by sp3 bonding,” Carbon. 2011. link Times cited: 224 NOT USED (low confidence) Q. Pei, Z. Sha, and Y.-W. Zhang, “A theoretical analysis of the thermal conductivity of hydrogenated graphene,” Carbon. 2011. link Times cited: 173 NOT USED (low confidence) S. W. Cranford and M. Buehler, “Mechanical properties of graphyne,” Carbon. 2011. link Times cited: 360 NOT USED (low confidence) L. Zhigilei, A. Volkov, E. Leveugle, and M. Tabetah, “The effect of the target structure and composition on the ejection and transport of polymer molecules and carbon nanotubes in matrix-assisted pulsed laser evaporation,” Applied Physics A. 2011. link Times cited: 33 NOT USED (low confidence) B. Wang, Y. Puzyrev, and S. Pantelides, “Strain enhanced defect reactivity at grain boundaries in polycrystalline graphene,” Carbon. 2011. link Times cited: 75 NOT USED (low confidence) Y. Long, J. Palmer, B. Coasne, M. Śliwińska-Bartkowiak, and K. Gubbins, “Pressure enhancement in carbon nanopores: a major confinement effect.,” Physical chemistry chemical physics : PCCP. 2011. link Times cited: 116 Abstract: Phenomena that occur only at high pressures in bulk phases a… read moreAbstract: Phenomena that occur only at high pressures in bulk phases are often observed in nanopores, suggesting that the pressure in such confined phases is large. We report a molecular simulation study of the pressure tensor of an argon nanophase within slit-shaped carbon pores and show that the tangential pressure is positive and large, while the normal pressure can be positive or negative depending on pore width. We also show that small changes in the bulk pressure have a large effect on the tangential pressure, suggesting that it should be possible to control the latter over wide ranges in laboratory experiments. read less NOT USED (low confidence) X. Yi, X. Shi, and H. Gao, “Cellular uptake of elastic nanoparticles.,” Physical review letters. 2011. link Times cited: 327 Abstract: A fundamental understanding of cell-nanomaterial interaction… read moreAbstract: A fundamental understanding of cell-nanomaterial interaction is of essential importance to nanomedicine and safe applications of nanotechnology. Here we investigate the adhesive wrapping of a soft elastic vesicle by a lipid membrane. We show that there exist a maximum of five distinct wrapping phases based on the stability of full wrapping, partial wrapping, and no wrapping states. The wrapping phases depend on the vesicle size, adhesion energy, surface tension of membrane, and bending rigidity ratio between vesicle and membrane. These results are of immediate interest to the study of vesicular transport and endocytosis or phagocytosis of elastic particles into cells. read less NOT USED (low confidence) M. Wu, “Strategies and challenges for the mechanical modeling of biological and bio-inspired materials,” Materials Science and Engineering: C. 2011. link Times cited: 26 NOT USED (low confidence) M. Fuentes-Cabrera et al., “Controlling the velocity of jumping nanodroplets via their initial shape and temperature.,” ACS nano. 2011. link Times cited: 31 Abstract: Controlling the movement of nanoscale objects is a significa… read moreAbstract: Controlling the movement of nanoscale objects is a significant goal of nanotechnology. Dewetting-induced ejection of nanodroplets could provide another means of achieving that goal. Molecular dynamics simulations were used to investigate the dewetting-induced ejection of nanoscale liquid copper nanostructures that were deposited on a graphitic substrate. Nanostructures in the shape of a circle, square, equilateral, and isosceles triangle dewet and form nanodroplets that are ejected from the substrate with a velocity that depends on the initial shape and temperature. The dependence of the ejected velocity on shape is ascribed to the temporal asymmetry of the mass coalescence during the droplet formation; the dependence on temperature is ascribed to changes in the density and viscosity. The results suggest that dewetting induced by nanosecond laser pulses could be used to control the velocity of ejected nanodroplets. read less NOT USED (low confidence) K. Ohya, “Progress in modeling erosion and redeposition on plasma facing materials,” Journal of Nuclear Materials. 2011. link Times cited: 3 NOT USED (low confidence) P. Kent, J. Dadras, and P. Krstic, “Improved hydrocarbon potentials for sputtering studies,” Journal of Nuclear Materials. 2011. link Times cited: 3 NOT USED (low confidence) Ó. Restrepo, A. Prabhakaran, and A. Delcorte, “Interaction of energetic clusters (Au3, Au400 and C60) with organic material and adsorbed gold nanoparticles,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2011. link Times cited: 11 NOT USED (low confidence) P. Kennedy and B. Garrison, “Mixed resolution model for C60 cluster bombardment of solid benzene,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2011. link Times cited: 2 NOT USED (low confidence) A. Delcorte and B. Garrison, “Desorption of large molecules with light-element clusters: Effects of cluster size and substrate nature,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2011. link Times cited: 19 NOT USED (low confidence) K. D. Smith, M. Bruns, S. Stoliarov, M. Nyden, O. Ezekoye, and P. R. Westmoreland, “Assessing the effect of molecular weight on the kinetics of backbone scission reactions in polyethylene using Reactive Molecular Dynamics,” Polymer. 2011. link Times cited: 23 NOT USED (low confidence) T. Guo, T. W. Ding, Q. Pei, and Y.-W. Zhang, “Effect of sp3-hybridized defects on the oscillatory behavior of carbon nanotube oscillators,” Physics Letters A. 2011. link Times cited: 7 NOT USED (low confidence) M. Fallet and S. Stuart, “Evolution of carbon based surfaces under bombardment: Examining the steady-state surface properties and the effect of potential,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2011. link Times cited: 4 NOT USED (low confidence) J. Qi, J. Huang, J. Feng, D. Shi, and J. Li, “The possibility of chemically inert, graphene-based all-carbon electronic devices with 0.8 eV gap.,” ACS nano. 2011. link Times cited: 52 Abstract: Graphene is an interesting electronic material. However, fla… read moreAbstract: Graphene is an interesting electronic material. However, flat monolayer graphene does not have significant gap in the electronic density of states, required for a large on-off ratio in logic applications. We propose here a novel device architecture, composed of self-folded carbon nanotube-graphene hybrids, which have been recently observed experimentally in Joule-heated graphene. These experiments demonstrated the feasibility of cutting, folding, and welding few-layer graphene in situ to form all-carbon nanostructures with complex topologies. The electronic gap of self-folded nanotubes can be combined with the semimetallicity of graphene electrodes to form a "metal-semiconductor-metal" junction. By ab initio calculations we demonstrate large energy gaps in the transmission spectra of such junctions, which preserve the intrinsic transport characteristics of the semiconducting nanotubes despite topologically necessary disinclinations at the flat graphene-curved nanotube interface. These all-carbon devices are proposed to be constructed by contact probe cutting and high-temperature annealing and, if produced, would be chemically stable at room temperature under normal gas environments. read less NOT USED (low confidence) J. Mathews, A. Duin, and A. Chaffee, “The utility of coal molecular models,” Fuel Processing Technology. 2011. link Times cited: 166 NOT USED (low confidence) R. Podila et al., “Curvature-induced symmetry lowering and anomalous dispersion of the G-band in carbon nanotubes,” Carbon. 2011. link Times cited: 6 NOT USED (low confidence) A. Datta, M. Kırca, Y. Fu, and A. To, “Surface structure and properties of functionalized nanodiamonds: a first-principles study,” Nanotechnology. 2011. link Times cited: 16 Abstract: The goal of this work is to gain fundamental understanding o… read moreAbstract: The goal of this work is to gain fundamental understanding of the surface and internal structure of functionalized detonation nanodiamonds (NDs) using quantum mechanics based density functional theory (DFT) calculations. The unique structure of ND assists in the binding of different functional groups to its surface which in turn facilitates binding with drug molecules. The ability to comprehensively model the surface properties, as well as drug–ND interactions during functionalization, is a challenge and is the problem of our interest. First, the structure of NDs of technologically relevant size (∼5 nm) was optimized using classical mechanics based molecular mechanics simulations. Quantum mechanics based density functional theory (DFT) was then employed to analyse the properties of smaller relevant parts of the optimized cluster further to address the effect of functionalization on the stability of the cluster and reactivity at its surface. It is found that functionalization is preferred over reconstruction at the (100) surface and promotes graphitization in the (111) surface for NDs functionalized with the carbonyl oxygen (C = O) group. It is also seen that the edges of ND are the preferred sites for functionalization with the carboxyl group (–COOH) vis-à-vis the corners of ND. read less NOT USED (low confidence) B.-J. Lee, W. Ko, H.-K. Kim, and E.-H. Kim, “The modified embedded-atom method interatomic potentials and recent progress in atomistic simulations,” Calphad-computer Coupling of Phase Diagrams and Thermochemistry. 2010. link Times cited: 137 NOT USED (low confidence) R. Ansari, S. Sahmani, and B. Arash, “Nonlocal plate model for free vibrations of single-layered graphene sheets,” Physics Letters A. 2010. link Times cited: 433 NOT USED (low confidence) A. Volkov and L. Zhigilei, “Structural stability of carbon nanotube films: the role of bending buckling.,” ACS nano. 2010. link Times cited: 73 Abstract: In films, mats, buckypaper, and other materials composed of … read moreAbstract: In films, mats, buckypaper, and other materials composed of carbon nanotubes (CNTs), individual CNTs are bound together by van der Waals forces and form entangled networks of bundles. Mesoscopic dynamic simulations reproduce the spontaneous self-assembly of CNTs into continuous networks of bundles and reveal that the bending buckling and the length of CNTs are the two main factors responsible for the stability of the network structures formed by defect-free CNTs. Bending buckling of CNTs reduces the bending energy of interconnections between bundles and stabilizes the interconnections by creating effective barriers for CNT sliding. The length of the nanotubes is affecting the ability of van der Waals forces of intertube interactions to counterbalance the internal straightening forces acting on curved nanotubes present in the continuous networks. The critical length for the formation of stable network structures is found to be ∼120 nm for (10,10) single-walled CNTs. In the simulations where the bending buckling is artificially switched off, the network structures are found to be unstable against disintegration into individual bundles even for micrometer-long CNTs. read less NOT USED (low confidence) N. Lümmen, “ReaxFF-molecular dynamics simulations of non-oxidative and non-catalyzed thermal decomposition of methane at high temperatures.,” Physical chemistry chemical physics : PCCP. 2010. link Times cited: 59 Abstract: Incomplete combustion of carbon based materials produces fin… read moreAbstract: Incomplete combustion of carbon based materials produces fine, carbon rich particles. Controlled manufacturing of very pure carbon nanoparticles (Carbon Black) can be achieved by, for example, thermal decomposition of gaseous precursors like acetylene and methane. Molecular dynamics simulations of hydrocarbon growth after non-catalyzed thermal decomposition of methane were carried out in order to understand the impact of the thermal decomposition reaction of methane on the formation of large hydrocarbon molecules. A reactive force field (ReaxFF) was employed to model the interactions of the involved hydrocarbons. The decomposition of 150 methane molecules was investigated at different system temperatures and system densities. Formation of molecular hydrogen, a broad range of hydrocarbons and carbon dimers from decomposed methane was observed above a temperature of 2500 K. The basic reactions are in agreement with existing models of thermal decomposition of methane. An increasing variety of hydrocarbons is observed with increasing temperature. The largest molecules formed within 1 ns of simulation time at 3500 K contain enough carbon atoms to form ring structures. Ring formation is observed in one case. read less NOT USED (low confidence) C. Reinhold, P. Krstic, S. Stuart, H. Zhang, P. R. Harris, and F. Meyer, “Isotope Dependence of Chemical Erosion of Carbon,” Journal of Nuclear Materials. 2010. link Times cited: 9 NOT USED (low confidence) M. Buehler and S. Keten, “Colloquium: Failure of molecules, bones, and the Earth itself,” Reviews of Modern Physics. 2010. link Times cited: 40 Abstract: Laboratory for Atomistic and Molecular Mechanics, Department… read moreAbstract: Laboratory for Atomistic and Molecular Mechanics, Department of Civil and Environmental Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Room 1-235AB Center for Materials Science and Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, USA; and Center for Computational Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, USA read less NOT USED (low confidence) L. Shen, H. S. Shen, and C.-li Zhang, “Nonlocal plate model for nonlinear vibration of single layer graphene sheets in thermal environments,” Computational Materials Science. 2010. link Times cited: 274 NOT USED (low confidence) C. Ren, Z. Xu, W. Zhang, Y. Li, Z. Zhu, and P. Huai, “Theoretical study of heat conduction in carbon nanotube hetero-junctions,” Physics Letters A. 2010. link Times cited: 24 NOT USED (low confidence) C. Li, Y. Liu, X.-R. Yao, M. Ito, T. Noguchi, and Q. Zheng, “Interfacial shear strengths between carbon nanotubes,” Nanotechnology. 2010. link Times cited: 36 Abstract: Interfacial shear strengths or static frictions between carb… read moreAbstract: Interfacial shear strengths or static frictions between carbon nanotubes (CNT) in contact at different cross angles are studied by using atomic mechanics. It is shown that the axial interfacial shear strengths between parallel CNTs in commensurate are two orders of magnitude greater than those in incommensurate. This strong chiral dependence is not surprising and is similar to that of the friction between two graphite basal planes. In contrast, we find that the interfacial shear strengths of crossly contacted CNT pairs are much less dependent upon chirality. The estimated values of interfacial shear strengths, ranging from 0.05 to 0.35 GPa, agree very well with experimentally measured results available in the literature. These results may thus be used as a basis for explaining the observed tension strengths of CNT bundles and films that are mainly bonded by van der Waals interactions and the mechanical behaviors of composite materials with highly concentrated CNTs. read less NOT USED (low confidence) J. W. Lee, A. Meade, E. Barrera, and J. Templeton, “Dependencies of the thermal conductivity of individual single-walled carbon nanotubes,” Proceedings of the Institution of Mechanical Engineers, Part N: Journal of Nanoengineering and Nanosystems. 2010. link Times cited: 7 Abstract: This work is aimed at assessing the sensitivity of carbon na… read moreAbstract: This work is aimed at assessing the sensitivity of carbon nanotube (CNT) thermal conductivity to physical and numerical parameters owing to its wide variation in the literature. CNTs of various lengths, chiralities, and temperatures are simulated with molecular dynamics. The Tersoff and AIREBO potentials are also compared in this study. Thermal conductivity is computed with two different non-equilibrium molecular dynamics (NEMD) methods, which show interestingly divergent results; exploring the CNT phonon density of states reveals a proximate cause for the differences. read less NOT USED (low confidence) Q. Pei, Y.-W. Zhang, and V. Shenoy, “A molecular dynamics study of the mechanical properties of hydrogen functionalized graphene,” Carbon. 2010. link Times cited: 443 NOT USED (low confidence) P. Mikulski, M. T. Knippenberg, and J. A. Harrison, “Merging bond-order potentials with charge equilibration.,” The Journal of chemical physics. 2009. link Times cited: 23 Abstract: A method is presented for extending any bond-order potential… read moreAbstract: A method is presented for extending any bond-order potential (BOP) to include charge transfer between atoms through a modification of the split-charge equilibration (SQE) formalism. Variable limits on the maximum allowed charge transfer between atomic pairs are defined by mapping bond order to an amount of shared charge in each bond. Charge transfer is interpreted as an asymmetry in how the shared charge is distributed between the atoms of the bond. Charge equilibration (QE) assesses the asymmetry of the shared charge, while the BOP converts this asymmetry to the actual amount of charge transferred. When applied to large molecules, this BOP/SQE method does not exhibit the unrealistic growth of charges that is often associated with QE models. read less NOT USED (low confidence) P. Yaghoobi, M. K. Alam, K. Waluś, and A. Nojeh, “High subthreshold field-emission current due to hydrogen adsorption in single-walled carbon nanotubes: A first-principles study,” Applied Physics Letters. 2009. link Times cited: 12 Abstract: We investigate the effect of hydrogen adsorption on field-em… read moreAbstract: We investigate the effect of hydrogen adsorption on field-emission current from a single-walled carbon nanotube using first-principles calculations. The results show a new emission regime at field values around the field-emission threshold of bare nanotubes, with emission currents comparable to those of the high-field regime. This current enhancement can be explained with the surface dipole created as a result of the difference in electronegativity between carbon and hydrogen that contributes to electron extraction from the nanotube. read less NOT USED (low confidence) X. Song, S. Liu, Z. Gan, H. Yan, and Y. Ai, “Contact configuration modification at carbon nanotube-metal interface during nanowelding,” Journal of Applied Physics. 2009. link Times cited: 11 Abstract: Contact configuration modification at carbon nanotube (CNT)-… read moreAbstract: Contact configuration modification at carbon nanotube (CNT)-metal interface during nanowelding is investigated using molecular dynamics simulation. It is found that the nanowelding could be accomplished at a temperature much lower than the melting point of the metal, during which a side contact structure and core filling nanowires form at the CNT-metal interface. Metal atoms prefer entering into the core to moving along the outer surface of the CNTs. Also, the filling of the metal atoms into the CNT can enhance the local melting of the metal at the interface, which would facilitate the metal atoms wetting on the outer walls and dramatically increasing the contact length. read less NOT USED (low confidence) J.-M. Leyssale, J.-P. D. Costa, C. Germain, P. Weisbecker, and G. Vignoles, “An image-guided atomistic reconstruction of pyrolytic carbons,” Applied Physics Letters. 2009. link Times cited: 38 Abstract: A method for the generation of atomistic models of dense nan… read moreAbstract: A method for the generation of atomistic models of dense nanotextured carbons is presented. This method is based on the statistical analysis of high resolution transmission electron microscopy images and their three-dimensional (3D) extension through image synthesis under constraint. The resulting 3D images then serve as an external potential bringing the atoms to settle preferentially on the black areas during a conventional simulated annealing simulation. Application of this method to the case of two laminar pyrocarbons, differing in their degree of disorder, highlights the promising nature of this approach. read less NOT USED (low confidence) D. Duffy, “Modeling plasma facing materials for fusion power,” Materials Today. 2009. link Times cited: 25 NOT USED (low confidence) A. Muniz, M. Meyyappan, and D. Maroudas, “On the hydrogen storage capacity of carbon nanotube bundles,” Applied Physics Letters. 2009. link Times cited: 19 Abstract: An analytical model is presented to describe the effect of c… read moreAbstract: An analytical model is presented to describe the effect of carbon nanotube (CNT) swelling upon hydrogenation on the hydrogen storage capacity of single-walled CNT bundles; the model is properly parameterized using atomistic calculations for the relationship between CNT swelling and the degree of hydrogenation as measured by the coverage of the CNTs by chemisorbed atomic H. The model generates experimentally testable hypotheses, which can be used to explain the lower H storage capacities reported for CNT bundles and the experimentally observed nonuniformity of hydrogenation of CNT bundles. read less NOT USED (low confidence) J. Zimmerman, B. M. Wong, R. Jones, J. Templeton, and J. W. Lee, “Enhanced molecular dynamics for simulating porous interphase layers in batteries.” 2009. link Times cited: 0 Abstract: Understanding charge transport processes at a molecular leve… read moreAbstract: Understanding charge transport processes at a molecular level using computational techniques is currently hindered by a lack of appropriate models for incorporating anistropic electric fields in molecular dynamics (MD) simulations. An important technological example is ion transport through solid-electrolyte interphase (SEI) layers that form in many common types of batteries. These layers regulate the rate at which electro-chemical reactions occur, affecting power, safety, and reliability. In this work, we develop a model for incorporating electric fields in MD using an atomistic-to-continuum framework. This framework provides the mathematical and algorithmic infrastructure to couple finite element (FE) representations of continuous data with atomic data. In this application, the electric potential is represented on a FE mesh and is calculated from a Poisson equation with source terms determined by the distribution of the atomic charges. Boundary conditions can be imposed naturally using the FE description of the potential, which then propagates to each atom through modified forces. The method is verified using simulations where analytical or theoretical solutions are known. Calculations of salt water solutions in complex domains are performed to understand how ions are attracted to charged surfaces in the presence of electric fields and interfering media. read less NOT USED (low confidence) J. Palmer, J. Brennan, M. Hurley, A. Balboa, and K. Gubbins, “Detailed structural models for activated carbons from molecular simulation,” Carbon. 2009. link Times cited: 94 NOT USED (low confidence) P. Yaghoobi, K. Waluś, and A. Nojeh, “First-principles study of quantum tunneling from nanostructures: Current in a single-walled carbon nanotube electron source,” Physical Review B. 2009. link Times cited: 17 Abstract: We present a first-principles calculation of the emission cu… read moreAbstract: We present a first-principles calculation of the emission current in a single-walled carbon nanotube electron source. We have employed the nonequilibrium Green's function and Fisher-Lee's transmission formulation to describe electronic transport through the system. The simulation results reproduce the trends observed in experimental data closely and, in particular, the current saturation and deviation from the Fowler-Nordheim behavior. The proposed numerical approach is useful whenever a region of vacuum is present in the system Hamiltonian. read less NOT USED (low confidence) Y. Su, T.-R. Shan, and S. Sinnott, “Modification of poly(methyl methacrylate) by keV Ar deposition,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2009. link Times cited: 8 NOT USED (low confidence) D. Bachellerie, M. Sizun, F. Aguillon, D. Teillet-Billy, N. Rougeau, and V. Sidis, “Unrestricted study of the Eley-Rideal formation of H(2) on graphene using a new multidimensional graphene-H-H potential: role of the substrate.,” Physical chemistry chemical physics : PCCP. 2009. link Times cited: 36 Abstract: The Brenner potential is adapted to handle chemical interact… read moreAbstract: The Brenner potential is adapted to handle chemical interactions and reactions of H atoms at a graphene surface. The adapted potential reproduces several important features of DFT computed data and reveals an extended puckering of the surface upon its adsorption of an H atom. This potential is used to investigate in a much more realistic way than has been done before, the Eley-Rideal abstraction reaction producing H(2) in H + H-graphene collisions at energies E(col)< or = 0.2 eV. The graphene surface is represented by a slab of 200 carbon atoms and the study is carried out using classical molecular dynamics for vertical incidences in a cylinder centered about the chemisorption axis. A highlight of the present study is that upon the arrival of the gas phase H atom, the adsorbent C atom is attracted and pulls out its surrounding surface atoms. The hillock thus formed remains puckered until the newly formed molecule is released. The range of impact parameters leading to reaction depends on the collision energy and is governed by the shape of the entrance channel potential; the reaction probability in this range is 100%. On average, in the studied E(col) range, the available energy (3.92 eV + E(col)) is shared as: 69-52% for the internal energy, 11-23% for the translation energy and 20-25% for the energy imparted to the surface. Also, the average vibration and rotation energy levels of the nascent H(2) molecule are, respectively, v = 5-4 and j = 2-4. read less NOT USED (low confidence) A. Muniz, T. Singh, and D. Maroudas, “Effects of hydrogen chemisorption on the structure and deformation of single-walled carbon nanotubes,” Applied Physics Letters. 2009. link Times cited: 28 Abstract: We report results of molecular-dynamics simulations for the … read moreAbstract: We report results of molecular-dynamics simulations for the effects of atomic hydrogen chemisorption on the structure and deformation of single-walled carbon nanotubes. Upon hydrogenation, the nanotubes expand and the degree of expansion depends on the hydrogen coverage. There is a critical hydrogen coverage, ∼25%–30%, that marks the onset of a structural transition associated with the sp2-to-sp3 bonding transition: at lower-than-critical coverage, sp2 C–C bonding dominates and nanotube swelling is negligible; at higher-than-critical coverage, however, sp3 C–C bonding dominates and radial and axial strains increase monotonically with coverage. This behavior is independent of nanotube chirality and diameter and of temperature. read less NOT USED (low confidence) M. Zhao, M. Iron, P. Staszewski, N. E. Schultz, R. Valero, and D. Truhlar, “Valence-Bond Order (VBO): A New Approach to Modeling Reactive Potential Energy Surfaces for Complex Systems, Materials, and Nanoparticles.,” Journal of chemical theory and computation. 2009. link Times cited: 12 Abstract: The extension of molecular mechanics to reactive systems, me… read moreAbstract: The extension of molecular mechanics to reactive systems, metals, and covalently bonded clusters with variable coordination numbers requires new functional forms beyond those popular for organic chemistry and biomolecules. Here we present a new scheme for reactive molecular mechanics, which is denoted as the valence-bond order model, for approximating reactive potential energy surfaces in large molecules, clusters, nanoparticles, solids, and other condensed-phase materials, especially those containing metals. The model is motivated by a moment approximation to tight binding molecular orbital theory, and we test how well one can approximate potential energy surfaces with a very simple functional form involving only interatomic distances with no explicit dependence on bond angles or dihedral angles. For large systems the computational requirements scale linearly with system size, and no diagonalizations or iterations are required; thus the method is well suited to large-scale simulations. The method is illustrated here by developing a force field for particles and solids composed of aluminum and hydrogen. The parameters were optimized against both interaction energies and relative interaction energies. The method performs well for pure aluminum clusters, nanoparticles, and bulk lattices and reasonably well for pure hydrogen clusters; the mean unsigned error per atom for the aluminum-hydrogen clusters is 0.1 eV/atom. read less NOT USED (low confidence) H. Li, F. Sun, K. Liew, and X.-guang Liu, “Stretching behavior of a carbon nanowire encapsulated in a carbon nanotube,” Scripta Materialia. 2009. link Times cited: 12 NOT USED (low confidence) P. Krstic, C. Reinhold, and S. Stuart, “Plasma-surface interactions of hydrogenated carbon,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2009. link Times cited: 8 NOT USED (low confidence) C. Reinhold, P. Krstic, and S. Stuart, “Hydrogen reflection in low-energy collisions with amorphous carbon,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2009. link Times cited: 10 NOT USED (low confidence) Z. Wang, M. Devel, B. Dulmet, and S. Stuart, “Geometry‐Dependent Nonlinear Decrease of the Effective Young’s Modulus of Single‐walled Carbon Nanotubes Submitted to Large Tensile Loadings,” Fullerenes, Nanotubes and Carbon Nanostructures. 2009. link Times cited: 14 Abstract: In this study, we use molecular simulations based on the AIR… read moreAbstract: In this study, we use molecular simulations based on the AIREBO potential function to find new results on the effective Young's modulus of single‐walled carbon nanotubes. For large tensile loadings, this effective Young's modulus is found to decrease significantly down to only 45% of its initial value, with a decrease rate which is found, here, to be nonlinear. The dependence with radius or chiral angle of this nonlinear decrease rate is studied. For all the tubes tested, we also find values of the initial Young's modulus in good agreement with those of previous studies, and a linear increase of the tubes' surface area for large axial deformations. read less NOT USED (low confidence) A. Violi, “Coarse-Graining in Time: From Microscopics to Macroscopics.” 2008. link Times cited: 0 NOT USED (low confidence) B. Liu, M. Lusk, J. Ely, A. V. van Duin, and W. Goddard, “Reactive molecular dynamics force field for the dissociation of light hydrocarbons on Ni(111),” Molecular Simulation. 2008. link Times cited: 11 Abstract: The dissociation of small hydrocarbon molecules on Ni(111) s… read moreAbstract: The dissociation of small hydrocarbon molecules on Ni(111) surfaces is investigated using the Materials Studio® density functional theory code DMol3. The energetic barriers for these dissociations were obtained via linear/quadratic synchronous transit analysis. This kinetics information comprises a first principles database for hydrocarbon surface chemistry. The set was used to fit a new reactive molecular dynamics force field which was subsequently applied to consider the rate of finite temperature methane dissociation on Ni(111). In addition, the force field was used to estimate the degree of its transferability to hydrocarbons that are distinct from but structurally similar to those used to generate it. read less NOT USED (low confidence) H. Li, F. Sun, Y. Li, X.-guang Liu, and K. Liew, “Theoretical studies of the stretching behavior of carbon nanowires and their superplasticity,” Scripta Materialia. 2008. link Times cited: 16 NOT USED (low confidence) A. Violi, “Science-based model for particle formation from novel fuels.” 2008. link Times cited: 1 Abstract: With the advent of petascale high-performance computing plat… read moreAbstract: With the advent of petascale high-performance computing platforms, realistic multiscale modeling can be constructed to incorporate atomic-scale (molecular) information into macroscopic predictions of engineering systems. The overriding theme of the work presented in this paper is developing a multiscale modeling approach for soot formulation where atomistic data is integrated into macroscopic simulations. The prediction of soot formation remains arguably one of the most challenging subjects in combustion science, having an influence over a wide range of applications ranging from combustion efficiency to reducing emissions to slow global warming, to improved heat transfer designs in industrial settings, to predicting the radiation heat transfer from large scale fires. Starting from the fuel structures the new multiscale simulations reveals how chemical changes and transformation can propagate upward in scale to help define the function of the particle structures. In particular, the fuel structure influences the morphology of the nanoparticles, which in turn is critical in determining the overall growth and agglomeration behavior. These simulations make use of a newly proposed combination of molecular dynamics and kinetic Monte Carlo methodologies that will include both chemical reactions and agglomeration processes. The main strength of this approach is the ability to use important atomic-scale information directly into large scale description of the macroscopic phenomena. read less NOT USED (low confidence) F. Moulin, M. Devel, and S. Picaud, “Optical properties of soot nanoparticles,” Journal of Quantitative Spectroscopy & Radiative Transfer. 2008. link Times cited: 17 NOT USED (low confidence) P. Yaghoobi and A. Nojeh, “ELECTRON EMISSION FROM CARBON NANOTUBES,” Modern Physics Letters B. 2007. link Times cited: 23 Abstract: Carbon nanotubes, nanometer-diameter tubes made of carbon at… read moreAbstract: Carbon nanotubes, nanometer-diameter tubes made of carbon atoms, have garnered significant attention from researchers over the past 15 years due to their outstanding properties such as excellent electronic transport characteristics and mechanical strength. Because of their ability to carry extremely high current densities, their high aspect ratio, and small tip radius that enhances an external electric field greatly, one particularly promising area of interest has been the usage of nanotubes as electron sources. In this article we will try to provide an overview of the subject from various experimental and theoretical angles. read less NOT USED (low confidence) C. Reinhold, P. Krstic, and S. Stuart, “Time scales of chemical sputtering of carbon,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2007. link Times cited: 8 NOT USED (low confidence) K. D. Smith, S. Stoliarov, M. Nyden, and P. R. Westmoreland, “RMDff: A smoothly transitioning, forcefield-based representation of kinetics for reactive molecular dynamics simulations,” Molecular Simulation. 2007. link Times cited: 20 Abstract: RMDff is a new forcefield that smoothly couples the reactive… read moreAbstract: RMDff is a new forcefield that smoothly couples the reactive intersections of potential energy surfaces to model chemical reactions. The method uses switching functions to accomplish a smooth transition from reactant to product atom types. This paper demonstrates and tests RMDff for homolytic scissions. The reaction networks are described by localized events involving only a few atoms, so that the complex mechanisms employed in conventional kinetics modeling are not needed. Unlike quantum chemical calculations, which are feasible only for small molecules, this new valence-bond forcefield can be coupled with Reactive Molecular Dynamics to describe chemical reactions in large domains. read less NOT USED (low confidence) S. Stuart, P. Krstic, T. A. Embry, and C. Reinhold, “Methane production by deuterium impact at carbon surfaces,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2007. link Times cited: 22 NOT USED (low confidence) M. Mrovec, M. Moseler, C. Elsasser, and P. Gumbsch, “Atomistic modeling of hydrocarbon systems using analytic bond-order potentials,” Progress in Materials Science. 2007. link Times cited: 27 NOT USED (low confidence) M. Lísal, J. Brennan, and W. Smith, “Chemical reaction equilibrium in nanoporous materials: NO dimerization reaction in carbon slit nanopores.,” The Journal of chemical physics. 2006. link Times cited: 32 Abstract: We present a molecular-level simulation study of the effects… read moreAbstract: We present a molecular-level simulation study of the effects of confinement on chemical reaction equilibrium in nanoporous materials. We use the reaction ensemble Monte Carlo (RxMC) method to investigate the effects of temperature, nanopore size, bulk pressure, and capillary condensation on the nitric oxide dimerization reaction in a model carbon slit nanopore in equilibrium with a bulk reservoir. In addition to the RxMC simulations, we also utilize the molecular-dynamics method to determine self-diffusion coefficients for confined nonreactive mixtures of nitric oxide monomers and dimers at compositions obtained from the RxMC simulations. We analyze the effects of the temperature, nanopore width, bulk pressure, and capillary condensation on the reaction equilibrium with respect to the reaction conversion, fluid structure, and self-diffusion coefficients. We show that the influence of the temperature, nanopore size, and capillary condensation on the confined reaction equilibrium is quite dramatic while the effect of the bulk pressure on the reaction equilibrium in the carbon slit nanopore is only moderate. This work is an extension of previous work by Turner et al. [J. Chem. Phys. 114, 1851 (2001)] on the confined reactive nitric oxide system. read less NOT USED (low confidence) J. Los, L. Ghiringhelli, E. Meijer, and A. Fasolino, “Improved long-range reactive bond-order potential for carbon. I. Construction (Correction on vol 72, pg 214102, 2005),” Acta Crystallographica Section B-structural Science. 2005. link Times cited: 181 Abstract: We present LCBOPII, an improvement of the long-range carbon … read moreAbstract: We present LCBOPII, an improvement of the long-range carbon bond-order potential (LCBOP) by Los and Fasolino [Phys. Rev. B 68, 024107 (2003)]. LCBOPII contains a coordination dependent medium range term for bond distances between 1.7 and $4\phantom{\rule{0.3em}{0ex}}\mathrm{\AA{}}$, meant to reproduce the dissociation energy curves for single, double, and triple bonds and improve the reactive properties as well as the description of the liquid and of low coordinated phases. Other features of LCBOPII are a coordination dependent angular correlation, a correction for antibonding states, and a conjugation dependent torsional interaction based on ab initio calculations of the torsional barriers for a set of molecular configurations. We present results for the geometry and energetics of the graphite-to-diamond transformation and of the vacancy in diamond and graphite as well as the prediction of the energy barrier of the 5-77-5 defect in graphite and graphene for which ab initio results are available only for unsuitably small samples. In the accompanying paper (Ghiringhelli et al., Phys. Rev. B 72, 214103 (2005) we use LCBOPII to evaluate several properties, including the equation of state, of liquid carbon. read less NOT USED (low confidence) A. Delcorte, “Modeling keV particle interactions with molecular and polymeric samples,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2005. link Times cited: 12 NOT USED (low confidence) R. Neitola and T. Pakkanen, “Ab initio studies on the atomic-scale origin of friction between hydrocarbon layers,” Chemical Physics. 2004. link Times cited: 9 NOT USED (low confidence) H. Rafii-Tabar, “Computational modelling of thermo-mechanical and transport properties of carbon nanotubes,” Physics Reports. 2004. link Times cited: 190 NOT USED (low confidence) A. Delcorte, P. Bertrand, and B. Garrison, “A microscopic view of organic sample sputtering,” Applied Surface Science. 2003. link Times cited: 7 NOT USED (low confidence) W. Goddard, D. Brenner, S. Lyshevski, and G. Iafrate, “Contributions of Molecular Modeling to Nanometer-Scale Science and Technology.” 2002. link Times cited: 2 NOT USED (low confidence) N. Winograd and B. Garrison, “Molecular desorption and secondary ion mass spectrometry,” International Journal of Mass Spectrometry. 2001. link Times cited: 1 NOT USED (low confidence) A. Delcorte and B. Garrison, “Desorption of large organic molecules induced by keV projectiles,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2001. link Times cited: 16 NOT USED (low confidence) “Investigation of the heat transport in intersected graphene,” International Journal of Heat and Mass Transfer. 2023. link Times cited: 2 NOT USED (low confidence) X. Yang, Y. Wang, and J. Zhang, “Scaling up to macroscale superlubricity of sp2-dominated structural carbon films: Graphene and carbon onion,” Applied Surface Science. 2023. link Times cited: 1 NOT USED (low confidence) Y. Lin et al., “The effect of non-uniform pitch length and spiraling pathway on the mechanical properties of coiled carbon nanotubes,” International Journal of Mechanical Sciences. 2023. link Times cited: 2 NOT USED (low confidence) M. A. Rahman, “STUDY OF ANISOTROPIC THERMAL CONDUCTIVITY OF GAS ADSORBED TWO DIMENSIONAL COVALENT ORGANIC FRAMEWORKS.” 2023. link Times cited: 0 Abstract: The horizon in material science has expanded drastically by … read moreAbstract: The horizon in material science has expanded drastically by the prospect of stacking two dimensional (2D) materials into vertical stacks. One such emerging class of materials are 2D covalent organic frameworks (COFs), which have already established themselves as game-changing porous polymeric crystals due to their exceptional physical properties such as high porosities and large surface areas with additional flexibility of precisely controlling the functional building blocks. These unique properties have made COFs ideal candidates for a plethora of applications, such as gas separation, adsorption and storage, drug delivery, and as solid-state electrolytes for upcoming energy storage technologies. However, the excessive heat generation due to the adsorption of guest species can severely limit their suitability in aforementioned applications. Therefore, it is crucial to find innovative ways to modulate their thermal properties by fully comprehending the essential characteristics that control the effectiveness of energy transfer efficacies in these materials for successful implementation of COFs in practical devices. In this work, we carry out systematic atomistic simulations to study the influence of pore geometry of the 2D COFs on their anisotropic heat transfer mechanisms and to answer the long-standing debate on whether the guest molecules increase or decrease their overall thermal conductivity. We show that the thermal conductivity can either increase due to additional heat channels introduced by the gas adsorbates or decrease from enhanced phonon scattering resulting from the interactions between the gas and the solid pore walls of the COFs. More specifically, we conduct atomistic simulations on pristine and gas adsorbed COF structures with different pore sizes and reveal that for COFs with relatively larger pore sizes (≳2 nm), despite the reduction of the thermal conductivity of the solid framework due to solid-gas scattering, the increase in contribution to the overall thermal conductivity by the gas adsorbates (methane) in the 1D channel can dramatically enhance the cross-plane thermal conductivity. On the other hand, for COFs with relatively smaller pores (≲2 nm), the increase in solid-gas scattering results in a monotonic reduction in the cross-plane and in-plane thermal conductivity. We attribute the increase in cross-plane thermal conductivity of the larger-pore COFs to the elevated heat conduction by the lower-frequency vibrations (≲0.5 THz) compared to the total frequency range of the gas molecules confined in the larger pore. However, due to substantial broadening of the vibrational modes to higher frequencies, these low frequency vibrations of the gas adsorbates do not contribute to the heat conduction in small-pore COFs. Through our results we reveal the complex relationship between the pore geometry, diffusivity of confined gas molecules and solid-gas interactions, which dictate the tunable thermal conductivities of these porous crystals. Additionally, our results shed light on the inherent nature of gas diffusion and heat transfer in porous organic frameworks, and providing a new path forward to tune the thermal conductivity of 2D COFs by modulating the gas diffusion inside the pores. Our findings can have major implications in designing 2D polymeric crystals with desired thermal conductivities for efficient gas storage, separation, and catalysis applications. read less NOT USED (low confidence) Y. Tang, Z. Zhang, L. Li, J. Guo, and P. Yang, “Thermal transport enhancement resolution for graphene/Si and graphene/SiC interfaces,” International Journal of Thermal Sciences. 2022. link Times cited: 16 NOT USED (low confidence) H. Zou, Y. Feng, and L. Qiu, “Excellent heat transfer enhancement of CNT-metal interface by loading carbyne and metal nanowire into CNT,” International Journal of Heat and Mass Transfer. 2022. link Times cited: 9 NOT USED (low confidence) K. Zhou and B. Liu, “Potential energy functions,” Molecular Dynamics Simulation. 2022. link Times cited: 0 NOT USED (low confidence) A. Sharifian, T. Karbaschi, A. Rajabpour, M. Baghani, J. Wu, and M. Baniassadi, “Insights into thermal characteristics of spiral carbon-based nanomaterials: From heat transport mechanisms to tunable thermal diode behavior,” International Journal of Heat and Mass Transfer. 2022. link Times cited: 2 NOT USED (low confidence) B. Wang, W. Shao, Q. Cao, and Z. Cui, “Investigation on the interfacial heat transport between epoxy and the edge of amino-functionalized graphene,” International Journal of Heat and Mass Transfer. 2022. link Times cited: 6 NOT USED (low confidence) L. Hao-Xiang, F. Dai-Li, F. Yan-hui, and Z. Xin-Xin, “Phase change characteristics machanism of graphene nanosheets@sodium nitrate,” Acta Physica Sinica. 2022. link Times cited: 1 Abstract: Molten salt is regarded as one of the most promising candida… read moreAbstract: Molten salt is regarded as one of the most promising candidates for solar energy storage due to possessing stable properties and large energy storage densities. However, the intrinsically low thermal conductivity of molten salt has become a bottleneck for rapid heat storage and transport. The addition of nanoparticles is generally considered to be the most effective way to improve the thermal conductivity of molten salt phase change materials (PCMs) while the phase change enthalpy of the nanocomposite phase change materials usually shows two opposite trends of enhancement or weakening. What's more, the reason for the abnormal change of phase change enthalpy is not clear in the literature at present, so the mechanism of change needs to be further explored. In this paper, GNS (graphene nanosheets)@NaNO3 (sodium nitrate) nanocomposite phase change materials were prepared by hydration ultrasonic method. The materials were characterized by SEM (scanning electron microscope) and the phase change characteristics were measured using DSC (differential scanning calorimeter). Molecular dynamics simulation was carried out to explain the mechanism for the formation of the NaNO3 dense layer and the the noncollateral decrease of the enthalpy from the microscopic level. With the increase of GNS mass fraction, the melting point of the GNS@NaNO3 composite phase change material decreases slightly while the phase change enthalpy decreased significantly with a non-colligative trend. A 13.81% decrease of the theoretical phase change enthalpy was observed with GNS doping ratio of 1.5wt%. The NaNO3 clusters observed on the surface of GNS were considered to have not melted, resulting in a reduction in the phase change enthalpy. The mechanisms were further investigated by molecular dynamics simulation:The strong van der Waals attraction between GNS and NaNO3 leads to the formation of NaNO3 dense layer in the vicinity of GNS for 2~4 Å. With the increase of GNS mass fraction, the centroid equivalent distance between the dense layer and GNS gradually increases, which contributes to the mutual attraction between the two first increases and then weakens. When GNS mass fraction is 1.5%, the centroid equivalent distance reaches closest to the potential well position, leading to the strongest mutual attraction. In other words, the phase change enthalpy decreases most obviously at this mass fraction. Thus, conclusions could be drawn as:The type of interaction between molten salt and nano-enhancers and the position of the potential well are the fundamental reasons for the thickness of molten salt dense layer and the reduction of phase change enthalpy. The calculation of the interaction energy can be used to guide the selection of the mass fraction of the nano-enhancers, so as to avoid the loss of core material cluster and phase change enthalpy caused by the introduction of the nano-enhancers to the greatest extent. The preparation cost of the composite phase change material can also be reduced to a certain extent. read less NOT USED (low confidence) A. Mirzaei et al., “Catalyst and substrate-free synthesis of graphene nanosheets by unzipping C60 fullerene clusters using a pulse current method,” Materials Science in Semiconductor Processing. 2022. link Times cited: 1 NOT USED (low confidence) Y. Chen et al., “The Dual Role of Interlayer Crosslinks Leads to an Abnormal Behavior of Interlayer Thermal Resistance in Multilayer Graphene,” SSRN Electronic Journal. 2022. link Times cited: 4 NOT USED (low confidence) A. Kolesnikova, “Shear module of carbon molecular structures in the form of multilayer graphene with thin vertically oriented carbon nanotubes,” AIP Conference Proceedings. 2022. link Times cited: 0 NOT USED (low confidence) L. Galiakhmetova, P. Polyakova, and R. Murzaev, “Deformation mechanisms of tubulanes under hydrostatic tension,” MATHEMATICS EDUCATION AND LEARNING. 2022. link Times cited: 0 NOT USED (low confidence) L. Haoxiang, F. Daili, F. Yanhui, and Z. Xinxin, “Study on sodium nitrate doped with graphene nanosheets: Heat transport characteristics and mechanism,” 3RD INTERNATIONAL CONFERENCE ON ENERGY AND POWER, ICEP2021. 2022. link Times cited: 0 NOT USED (low confidence) Z. Qin, G. Jung, F. J. Martín-Martínez, and M. Buehler, “Multiscale Modeling and Applications of Bioinspired Materials with Gyroid Structures.” 2021. link Times cited: 2 NOT USED (low confidence) M. Righi, “Ab initio insights into graphene lubricity.” 2021. link Times cited: 0 NOT USED (low confidence) B. Sharma and A. Parashar, “Effect of defects and functionalization on mechanical and fracture properties of two-dimensional nanomaterials,” Fundamentals and Properties of Multifunctional Nanomaterials. 2021. link Times cited: 0 NOT USED (low confidence) P. Restuccia, M. Ferrario, and M. Righi, “Monitoring water and oxygen splitting at graphene edges and folds: Insights into the lubricity of graphitic materials,” Carbon. 2020. link Times cited: 32 NOT USED (low confidence) W. Peng and K. Sun, “Effects of Cu/graphene interface on the mechanical properties of multilayer Cu/graphene composites,” Mechanics of Materials. 2020. link Times cited: 41 NOT USED (low confidence) K. Nordlund and F. Djurabekova, “Molecular Dynamics Simulations of Non-equilibrium Systems,” Handbook of Materials Modeling. 2020. link Times cited: 3 NOT USED (low confidence) O. Hod, “Interlayer Interactions in Low-Dimensional Layered Hetero-structures: Modeling and Applications,” Handbook of Materials Modeling. 2020. link Times cited: 0 NOT USED (low confidence) H. S. Park, “Mechanics and Electromechanics of Two-Dimensional Atomic Membranes,” Handbook of Materials Modeling. 2020. link Times cited: 0 NOT USED (low confidence) H. Noori et al., “A Systematic Molecular Dynamics Investigation on the Graphene Polymer Nanocomposites for Bulletproofing,” Cmc-computers Materials & Continua. 2020. link Times cited: 3 NOT USED (low confidence) O. Penkov, “Computer simulations and theoretical predictions.” 2020. link Times cited: 0 NOT USED (low confidence) M. Dewapriya, R. Rajapakse, and S. Meguid, “Mechanical properties of two-dimensional materials: atomistic modeling and future directions.” 2020. link Times cited: 2 NOT USED (low confidence) G. Ackland and G. Bonny, “Interatomic Potential Development,” Comprehensive Nuclear Materials. 2020. link Times cited: 4 NOT USED (low confidence) A. C. Pierre, “Gelation,” Introduction to Sol-Gel Processing. 2020. link Times cited: 9 NOT USED (low confidence) R. Diaz and Z. Guo, “ENHANCED CONDUCTION AND POOL BOILING HEAT TRANSFER ON SINGLE-LAYER GRAPHENE-COATED SUBSTRATES,” Journal of Enhanced Heat Transfer. 2019. link Times cited: 18 Abstract: Molecular dynamics simulations were employed to understand t… read moreAbstract: Molecular dynamics simulations were employed to understand the improved thermal conductivity and water boiling heat transfer characteristics of adding single-layer graphene (SLG) to substrates. The 100, 110, and 111 planes of Cu, Ni, Pt, and Si were selected for study based on common heat transfer and graphene-compatible materials. Vibrational density of states data was analyzed in order to view heat flux trends. After equilibration at 300K the temperature was increased to 400K for 3 ns to induce nucleate boiling (~27K wall superheat). It was found that the addition of SLG greatly improved the overall thermal conductivity of the composite substrate, with increases in the 1-2 orders of magnitude range. The temperature gradients for SLG-coated substrates were found to be much lower than bare substrates. Nanoscale boiling curves were produced. The CuG100 case shows a 14% increase in critical heat flux (CHF) (~0.36 GW/m2) over the Cu100 case, and the PtG100 shows a 9% increase (~0.48 GW/m2) over the Pt100 case. The SLG-coated substrates also required less superheat to achieve the CHF condition. read less NOT USED (low confidence) E. Ghavanloo, H. Rafii-Tabar, and S. A. Fazelzadeh, “Elastic Properties of Carbon-Based Nanoscopic Structures,” Springer Tracts in Mechanical Engineering. 2019. link Times cited: 0 NOT USED (low confidence) X. Liu, “Dynamic Ripples in Graphene Monolayer,” Springer Theses. 2019. link Times cited: 1 NOT USED (low confidence) X. Liu, “Mechanical Behaviors of Graphene Nanolayered Composites,” Springer Theses. 2019. link Times cited: 0 NOT USED (low confidence) K. K. Gupta and S. Dey, “Effect of Temperature on the Fracture Strength of Perfect and Defective MonoLayered Graphene,” Lecture Notes on Multidisciplinary Industrial Engineering. 2019. link Times cited: 4 NOT USED (low confidence) X. Liu, “Defect-Induced Discontinuous Effects in Graphene Nanoribbon Under Torsion Loading,” Springer Theses. 2019. link Times cited: 0 NOT USED (low confidence) N. A. Mehta, A. Rayabharam, and D. Levin, “Simulations of surface evolution due to particulate-surface interaction,” AIAA Scitech 2019 Forum. 2019. link Times cited: 2 NOT USED (low confidence) M. Dewapriya and S. Meguid, “Tailoring fracture strength of graphene,” Computational Materials Science. 2018. link Times cited: 27 NOT USED (low confidence) S. Winczewski, M. Y. Shaheen, and J. Rybicki, “Interatomic potential suitable for the modeling of penta-graphene: Molecular statics/molecular dynamics studies,” Carbon. 2018. link Times cited: 34 NOT USED (low confidence) B. Raghavan and T. Gupta, “H2/CH4 Gas Separation Using Graphene Drilled With Elliptical Pores,” Materials Today: Proceedings. 2018. link Times cited: 0 NOT USED (low confidence) S. Mejía-Rosales, “Simulation of Metal Clusters and Nanostructures.” 2018. link Times cited: 3 NOT USED (low confidence) S. Dmitriev, J. Baimova, E. Korznikova, and A. Chetverikov, “Nonlinear Excitations in Graphene and Other Carbon Nano-Polymorphs.” 2018. link Times cited: 2 NOT USED (low confidence) J. Al-Ghalith and T. Dumitricǎ, “Deformed Carbon Nanotubes.” 2018. link Times cited: 0 NOT USED (low confidence) X. Wu, “Experiment Approaches and Simulation Methods.” 2018. link Times cited: 0 NOT USED (low confidence) Y. Nie, “A multiphysics model for carbon nanotube based nanoelectromechanical contact switch.” 2018. link Times cited: 0 Abstract: This research builds up a multiphysics molecular model for n… read moreAbstract: This research builds up a multiphysics molecular model for nano electromechanical contact switch in a gaseous environment. To predict the device dynamic properties precisely, multiple methods have been incorporated, including: grand canonical Monte Carlo method for adsorption phenomenon, atomistic moment theory for dynamic electric field, and molecular dynamic simulation for carbon nanotube deformation. Using such a model, the charge distribution has been characterized; the adsorption influence on the frequency change and damping ratio has been investigated. The model has a great potential in the future design of nano electromechanical system. read less NOT USED (low confidence) I. Giordanelli, “Correlated Deformations in Graphene.” 2017. link Times cited: 0 Abstract: In this thesis, we perform a numerical study on the conforma… read moreAbstract: In this thesis, we perform a numerical study on the conformal invariance, crumpling, and electrical properties of suspended graphene sheets. We use molecular dynamics simulations for describing the motion of the carbon atoms, and a lattice Boltzmann model to calculate the electronic flow within the hydrodynamics formalism. We find that graphene membranes exhibit correlated deformations which we study under the framework of rough surfaces and determine their Hurst (roughness) exponent. We show that, independent of the temperature, graphene membranes possess scale invariant properties, expressed for instance in a well-defined fractal dimension of the iso-height lines at the percolation threshold. Additionally, we provide numerical evidence that the iso-height lines are conformally invariant. Interestingly, iso-height lines of other rough surfaces are not necessarily conformally invariant even if they have the same Hurst exponent, e.g. random Gaussian surfaces. We compare our graphene sheets with random Gaussian surfaces with the same Hurst exponent and find not only a disagreement in the fractal dimension of the iso-height lines, but also a disagreement in the distribution of the modulus of the Fourier coefficients. The correlated random deformations in graphene are responsible for the stability of the two-dimensional material. An analysis of the two-dimensional crystal problem beyond the harmonic approximation, has led to the conclusion that atomically thin membranes can be stabilised through their deformation in the third dimension. In contrast to it, graphene membranes with sufficiently high vacancy densities have the tendency to crumple, deviating read less NOT USED (low confidence) J. M. Alred, N. Gupta, M. Liu, Z. Zhang, and B. Yakobson, “Mechanics of Materials Creation: Nanotubes, Graphene, Carbyne, Borophenes,” Procedia IUTAM. 2017. link Times cited: 4 NOT USED (low confidence) Y. Tang, B. Yang, H. Yang, P. Yang, J. Yang, and Y. Hu, “Numerical investigation on mechanical properties of graphene covering silicon nanofilms,” Computational Materials Science. 2017. link Times cited: 5 NOT USED (low confidence) A. Soloviev, R. Gruzdev, A. V. Derkun, and E. Lähderanta, “Identification of Graphene Properties in the Framework of Molecular Dynamics.” 2017. link Times cited: 0 NOT USED (low confidence) W.-J. Lee, K. Chiang, V. Lebiga, and V. Fomin, “Interfacial topography and properties of graphene sheets on different reconstructed silicon surfaces,” Carbon. 2016. link Times cited: 2 NOT USED (low confidence) R. Nazemnezhad and M. Zare, “Nonlocal Reddy beam model for free vibration analysis of multilayer nanoribbons incorporating interlayer shear effect,” European Journal of Mechanics A-solids. 2016. link Times cited: 20 NOT USED (low confidence) B. Jayasena, S. Subbiah, and C. Reddy, “High Rake Angle Orthogonal Machining of Highly Ordered Pyrolytic Graphite Parallel to the Basal Plane,” Journal of Manufacturing Science and Engineering-transactions of The Asme. 2016. link Times cited: 0 NOT USED (low confidence) W. Xing, C.-X. Zhang, S. Fan, and Li-Cheng, “Research Progress on Resonant Characteristics of Graphene,” Journal of Inorganic Materials. 2016. link Times cited: 2 Abstract: The research on the resonant characteristics of graphene is … read moreAbstract: The research on the resonant characteristics of graphene is essential due to its excellence and vital significance for the future development and application of resonant sensors. Currently, the resonant characteristics of graphene are studied by experimental measurements and theoretical analysis, and the theoretical analysis is composed of the methods based on nano-scale mechanic and on classical mechanics. And the related theoretical researches on graphene are urgent because it is difficult to obtain the resonant characteristics of graphene accurately with experiments. In this paper, research methods, achievements and controversial problems are reviewed, including progress and consensus of the researches on the resonant characteristic of graphene e.g., the experiments of the resonant graphene sensor, the theoretical research methods and its classification, present situation, advantages, disadvantages, as well as the developing trend. read less NOT USED (low confidence) O. Lehtinen and J. Kotakoski, “Structural Changes in 2D Materials Due to Scattering of Light Ions.” 2016. link Times cited: 0 NOT USED (low confidence) A. R. Alian and S. Meguid, “Multiscale Modeling of Nanoreinforced Composites.” 2016. link Times cited: 10 NOT USED (low confidence) Z. Ding, Q. Pei, J.-W. Jiang, W. Huang, and Y.-W. Zhang, “Interfacial thermal conductance in graphene/MoS2 heterostructures,” Carbon. 2016. link Times cited: 102 NOT USED (low confidence) Y. Gao, W. Yang, and B. Xu, “Unusual thermal conductivity behavior of serpentine graphene nanoribbons under tensile strain,” Carbon. 2016. link Times cited: 20 NOT USED (low confidence) M. Ayub, “Experimental and numerical investigation of a carbon nanotube acoustic absorber.” 2016. link Times cited: 1 NOT USED (low confidence) K. Cai, H. Yin, X. Zhang, and J. Shi, “A nano converter from carbon nanotubes with multiple output signals,” Computational Materials Science. 2016. link Times cited: 2 NOT USED (low confidence) D. Mulvihill, N. P. O’Brien, W. Curtin, and M. A. McCarthy, “Potential routes to stronger carbon nanotube fibres via carbon ion irradiation and deposition,” Carbon. 2016. link Times cited: 8 NOT USED (low confidence) S. Goel, X. Luo, A. Agrawal, and R. Reuben, “Diamond machining of silicon: A review of advances in molecular dynamics simulation,” International Journal of Machine Tools & Manufacture. 2015. link Times cited: 314 NOT USED (low confidence) D. Casimir, R. Garcia-Sanchez, and P. Misra, “Raman Spectroscopy, Modeling and Simulation Studies of Carbon Nanotubes.” 2015. link Times cited: 1 NOT USED (low confidence) D. Casimir, R. Garcia-Sanchez, and P. Misra, “Raman spectroscopy and molecular simulation studies of graphitic nanomaterials.” 2015. link Times cited: 0 NOT USED (low confidence) J.-W. Jiang, “Strain engineering for thermal conductivity of single-walled carbon nanotube forests,” Carbon. 2015. link Times cited: 12 NOT USED (low confidence) B. Vu, “Stochastic uncertainty quantification for multiscale modeling of polymeric nanocomposites.” 2015. link Times cited: 0 Abstract: Nanostructured materials are extensively applied in many fie… read moreAbstract: Nanostructured materials are extensively applied in many fields of material science for new industrial applications, particularly in the automotive, aerospace industry due to their exceptional physical and mechanical properties. Experimental testing of nanomaterials is expensive, timeconsuming,challenging and sometimes unfeasible. Therefore,computational simulations have been employed as alternative method to predict macroscopic material properties. The behavior of polymeric nanocomposites (PNCs) are highly complex.
The origins of macroscopic material properties reside in the properties and interactions taking place on finer scales. It is therefore essential to use multiscale modeling strategy to properly account for all large length and time scales associated with these material systems, which across many orders of magnitude. Numerous multiscale models of PNCs have been established, however, most of them connect only two scales. There are a few multiscale models for PNCs bridging four length scales (nano-, micro-, meso- and macro-scales). In addition, nanomaterials are stochastic in nature and the prediction of macroscopic mechanical properties are influenced by many factors such as fine-scale features. The predicted mechanical properties obtained by traditional approaches significantly deviate from the measured values in experiments due to neglecting uncertainty of material features. This discrepancy is indicated that the effective macroscopic properties of materials are highly sensitive to various sources of uncertainty, such as loading and boundary conditions and material characteristics, etc., while very few stochastic multiscale models for PNCs have been developed. Therefore, it is essential to construct PNC models within the framework of stochastic modeling and quantify the stochastic effect of the input parameters on the macroscopic mechanical properties of those materials.
This study aims to develop computational models at four length scales (nano-, micro-, meso- and macro-scales) and hierarchical upscaling approaches bridging length scales from nano- to macro-scales. A framework for uncertainty quantification (UQ) applied to predict the mechanical properties
of the PNCs in dependence of material features at different scales is studied. Sensitivity and uncertainty analysis are of great helps in quantifying the effect of input parameters, considering both main and interaction effects, on the mechanical properties of the PNCs. To achieve this major
goal, the following tasks are carried out:
At nano-scale, molecular dynamics (MD) were used to investigate deformation mechanism of glassy amorphous polyethylene (PE) in dependence of temperature and strain rate. Steered molecular dynamics (SMD)were also employed to investigate interfacial characteristic of the PNCs.
At mico-scale, we developed an atomistic-based continuum model represented by a representative volume element (RVE) in which the SWNT’s properties and the SWNT/polymer interphase are modeled at nano-scale, the surrounding polymer matrix is modeled by solid elements. Then, a two-parameter model was employed at meso-scale. A hierarchical multiscale approach has been developed to obtain the structure-property relations at one length scale and transfer the effect to the higher length
scales. In particular, we homogenized the RVE into an equivalent fiber.
The equivalent fiber was then employed in a micromechanical analysis (i.e. Mori-Tanaka model) to predict the effective macroscopic properties of the PNC. Furthermore, an averaging homogenization process was also used to obtain the effective stiffness of the PCN at meso-scale.
Stochastic modeling and uncertainty quantification consist of the following ingredients:
- Simple random sampling, Latin hypercube sampling, Sobol’ quasirandom sequences, Iman and Conover’s method (inducing correlation in Latin hypercube sampling) are employed to generate independent and dependent sample data, respectively.
- Surrogate models, such as polynomial regression, moving least squares (MLS), hybrid method combining polynomial regression and MLS, Kriging regression, and penalized spline regression, are employed as an approximation of a mechanical model. The advantage of the surrogate models is the high computational efficiency and robust as they can be constructed from a limited amount of available data.
- Global sensitivity analysis (SA) methods, such as variance-based methods for models with independent and dependent input parameters, Fourier-based techniques for performing variance-based methods and partial derivatives, elementary effects in the context of local SA, are used to quantify the effects of input parameters and their interactions on the mechanical properties of the PNCs. A bootstrap technique is used to assess the robustness of the global SA methods with respect to their performance.
In addition, the probability distribution of mechanical properties are determined by using the probability plot method. The upper and lower bounds of the predicted Young’s modulus according to 95 % prediction intervals were provided.
The above-mentioned methods study on the behaviour of intact materials. Novel numerical methods such as a node-based smoothed extended finite element method (NS-XFEM) and an edge-based smoothed phantom node method (ES-Phantom node) were developed for fracture problems. These methods can be used to account for crack at macro-scale for future works. The predicted mechanical properties were validated and verified. They show good agreement with previous experimental and simulations results. read less NOT USED (low confidence) N. Manini, O. Braun, and A. Vanossi, “Nanotribology: Nonlinear mechanisms of friction.” 2015. link Times cited: 6 NOT USED (low confidence) K. N. Clayton, J. Khor, and S. Wereley, “Rapid Electrokinetic Patterning and Its Applications.” 2015. link Times cited: 1 NOT USED (low confidence) B. Faria, N. Silvestre, and J. Lopes, “Influence of Bond Kinematics on the Rupture of Non-Chiral CNTs under Stretching–Twisting.” 2014. link Times cited: 0 NOT USED (low confidence) A. Henry, “THERMAL TRANSPORT IN POLYMERS,” Annual Review of Heat Transfer. 2014. link Times cited: 89 Abstract: An introduction to polymers and their thermal conductivity i… read moreAbstract: An introduction to polymers and their thermal conductivity is provided, with particular attention paid to recent work that has highlighted the potential to make high thermal conductivity polymers. The thermal conductivity of amorphous polymers is generally low, on the order of 0.1–1.0 W m−1 K−1; however, polymers can be inexpensive to manufacture and they are corrosion resistant and lightweight, which makes them attractive for heat transfer applications. To realize their potential, higher thermal conductivity and higher strength is needed, which can be achieved to some extent by adding fillers to a polymer matrix. A review of the strategies employed to raise the thermal conductivity of polymers is provided along with an introductory review of the physics that intrinsically allows individual polymer molecules to serve as good heat conductors. read less NOT USED (low confidence) O. Glukhova, G. V. Savostyanov, and M. Slepchenkov, “A New Approach to Dynamical Determination of the Active Zone in the Framework of the Hybrid Model (Quantum Mechanics/ Molecular Mechanics),” Procedia Materials Science. 2014. link Times cited: 11 NOT USED (low confidence) S. Lee, J. Park, J. Yang, and W. Lu, “Molecular Dynamics Simulations of the Traction-Separation Response at the Interface between PVDF Binder and Graphite in the Electrode of Li-Ion Batteries,” Journal of The Electrochemical Society. 2014. link Times cited: 45 NOT USED (low confidence) A. F. Fonseca and P. Lisboa-Filho, “Abrikosov-like lattices in organic crystals on graphite surface,” MRS Proceedings. 2014. link Times cited: 0 Abstract: The interest for surface patterning presents a fast increasi… read moreAbstract: The interest for surface patterning presents a fast increasing in the last few years due to several factors ranging from miniaturization trends and sensor design to worries about the absorption of carcinogenic molecules on inhalable particles. Although the existence of a vast literature regarding the self-assembly and patterning of nanoparticles on different types of surfaces, it remains unclear the dynamics and main mechanisms behind the formation and maintenance of two-dimensional symmetric patterns of small molecules on top of surfaces. In this contribution, we report initial results on an investigation on the similarities between the well-known Abrikosov hexagonal lattices in superconductors, and the spontaneous formation of hexagonal patterns of some small polycyclic aromatic hydrocarbons (PAHs) on top of a graphitic surface. In order to attest our results, some experimental results from literature are compared to the obtained results. read less NOT USED (low confidence) Y. Pouillon et al., “Gas Sensing and Thermal Transport Through Carbon-Nanotube-Based Nanodevices.” 2014. link Times cited: 1 NOT USED (low confidence) X. Sun, Z. Fu, M. Xia, and Y. Xu, “Effects of vacancy defect on the tensile behavior of graphene,” Theoretical and Applied Mechanics Letters. 2014. link Times cited: 33 Abstract: Graphene is the strongest material but its performance is si… read moreAbstract: Graphene is the strongest material but its performance is significantly weakened by vacancy defects. We use molecular dynamics simulations to investigate the tensile behavior of a graphene which contains a single vacancy defect. Our results suggest that because of the single vacancy, the fracture strength of graphene losses about 17.7%. The stress concentration around the vacancy defect leads to the destruction of nearby six-member rings structure, which forms the initial crack. The propagation direction of this crack in defective graphene is at an angle of 60° to the tensile direction initially, but then becomes perpendicular to the tensile direction. read less NOT USED (low confidence) Y. Jhon, Y. Jhon, G. Yeom, and M. Jhon, “Orientation dependence of the fracture behavior of graphene,” Carbon. 2014. link Times cited: 74 NOT USED (low confidence) M. Lan, “Developments in Extended Finite Element Methods for Extraction of Strain Energy Release Rates and Computational Nanomechanics for SWCNT Aggregates.” 2013. link Times cited: 2 Abstract: Developments in Extended Finite Element Methods for Extracti… read moreAbstract: Developments in Extended Finite Element Methods for Extraction of Strain Energy Release Rates and Computational Nanomechanics for SWCNT Aggregates read less NOT USED (low confidence) M. Schwarzbart and A. Steindl, “Buckling of a Supported Annular Plate with a Non-Euclidean Metric.” 2013. link Times cited: 0 NOT USED (low confidence) L. A. S. de Oliveira and P. Greaney, “Mapping thermal resistance around vacancy defects in graphite,” MRS Proceedings. 2013. link Times cited: 2 Abstract: High purity bulk graphite is applicable in many capacities i… read moreAbstract: High purity bulk graphite is applicable in many capacities in the nuclear industry. The thermal conductivity of graphite has been found to vary as a function of how its morphology changes on the nanoscale, and the type and number of defects present. We compute thermal conductivities at the nanolevel using large scale classical molecular dynamics simulations and by employing the Green-Kubo method in a set of in silico experiments geared towards understanding the impact of defects in the thermal conductivity of graphite. We present the results obtained for systems with 1– 3 vacancies, and compile a summary of some of the methods applied and difficulties encountered. INTRODUCTION Graphite is applicable in many capacities in the nuclear industry. It is used in gaskets, sealants, and liners, but most importantly, it is used as a moderator and a reflector, and its unique properties are being exploited in order to develop high-tech fuel elements for next-generation nuclear reactors. While graphite has been comprehensively studied since the 1950s [4], there are aspects of its thermal conductivity (κ) which have yet to be well understood. Graphite is highly anisotropic and the thermal conductivity along the basal plane (κa) differs significantly from that along the c-axis (κc), with an experimentally computed anisotropy ratio (κa/κc) just below 210 at 300K in near-ideal graphite [3]. Furthermore, the thermal conductivity in bulk graphite varies as a function of how the material is manufactured and its exposure to radiation and high temperatures within a reactor. Our motivation is to establish a systematic understanding of how defect type, number and different defect-type ensembles affect thermal resistance in graphite. Defects can occur at different scales, and while grain boundaries, porosity and amorphous regions, for instance, can significantly affect thermal transport, in our first steps towards achieving our goal we examine point defects. In this Proceedings paper we report on a collection of vacancy defects. In addition, we summarize the methods we have developed for studying phonon scattering around defects and some of the difficulties that arise when computing κ in graphite. METHODS Simulations were performed using large-scale equilibrium classical molecular dynamics. More specifically, we use the LAMMPS [6] software, distributed by Sandia National Laboratories. Molecular dynamics (MD) is a powerful tool for understanding thermal behavior and phonon scattering. However, there are several limitations to MD that make qualitative predictions of thermal conductivity unlikely. To mitigate this and to gain insight into how thermal resistance varies at the atomic-level and as a function of the different defects, we perform a comparative analysis. In this study, we compare the thermal conductivity and corresponding anisotropy ratios obtained between the different defective systems and the perfect crystal, as well as in different regions within each system. κ is computed along each axis, for each system and in specific regions within each system, 672 read less NOT USED (low confidence) S. Gopalakrishnan and S. Narendar, “Various Modeling Techniques for Nanostructures.” 2013. link Times cited: 1 NOT USED (low confidence) M. Ma, L. Shen, L. Wang, and Q. Zheng, “BUCKLING PROPERTIES OF PRE-STRESSED MULTI-WALLED CARBON NANOTUBES,” International Journal for Multiscale Computational Engineering. 2013. link Times cited: 3 Abstract: Pre-stressed multi-walled carbon nanotubes (PS-MWCNTs) have … read moreAbstract: Pre-stressed multi-walled carbon nanotubes (PS-MWCNTs) have (a) interwall distances less than 0.34 nm, (b) highest Young’s moduli, and (c) interlayer shear strengths several orders higher than those of normal MWCNTs. In this paper, the buckling behaviors of PS-MWCNTs with two to six layers have been studied using both molecular mechanics simulation and continuum mechanics models. Considering the interlayer distance as the key factor, we reveal three features of the buckling behavior of PS-MWCNTs subjected to axial loading: (1) the buckling membrane force is not a monotonic function of interlayer distance, depending on the nanotube index (i.e. diameter); (2) the buckling membrane force increases as the interlayer distance decreases for PS-MWCNTs with fixed intertube chirality, which is a combined effect of interlayer distance and tube diameter; and (3) for PS-MWCNTs with the same innermost tube, the buckling membrane force increases as the number of walls increases. Furthermore, molecular mechanics simulation and the multi-shell continuum model agree on the trend of the buckling membrane force as a function of interlayer distance, tube chirality index, and number of layers. These results can serve as a bridge between the molecular simulation and the continuum model for the buckling behaviors of PS-MWCNT. read less NOT USED (low confidence) B. Szefler and B. Szefler, “On Molecular Dynamics of the Diamond D5 Substructures.” 2013. link Times cited: 1 NOT USED (low confidence) P. Khalatur, “Molecular Dynamics Simulations in Polymer Science: Methods and Main Results.” 2012. link Times cited: 28 NOT USED (low confidence) R. Ansari and H. Rouhi, “Explicit analytical expressions for the critical buckling stresses in a monolayer graphene sheet based on nonlocal elasticity,” Solid State Communications. 2012. link Times cited: 54 NOT USED (low confidence) R. Ansari and H. Rouhi, “Analytical Treatment of the Free Vibration of Single-Walled Carbon Nanotubes Based on the Nonlocal Flugge Shell Theory,” Journal of Engineering Materials and Technology-transactions of The Asme. 2012. link Times cited: 38 NOT USED (low confidence) S. W. Cranford and M. Buehler, “Computational Approaches and Simulation.” 2012. link Times cited: 0 NOT USED (low confidence) Y. Kinoshita, M. Murashima, M. Kawachi, and N. Ohno, “Mechanical Properties of Carbon Nanotubes with One-Dimensional Intramolecular Junction,” Journal of The Society of Materials Science, Japan. 2012. link Times cited: 0 Abstract: Mechanical properties of single-walled carbon nanotubes with… read moreAbstract: Mechanical properties of single-walled carbon nanotubes with one-dimensional intramolecular junctions (CNT-IMJs) are investigated using first-principles density functional theory calculations. The influence of Stone-Wales (SW) defects (a pair of five- and seven-membered rings) at a junction on the Young's modulus, tensile strength and breaking strain of the CNT-IMJs are discussed from the charge density and interatomic distance. Our calculations reveal that deformation concentration on a seven-membered ring causes the decrease in the strength and elongation of the CNT-IMJs. It is found that the tensile strength and breaking strain of the CNT-IMJs depend on the position of SW defects, while the number of SW defects hardly affects them. The applicability of AIREBO classical interatomic potential to simulate tensile deformation in the CNT-IMJs is also discussed. read less NOT USED (low confidence) A. Delcorte, B. Garrison, and K. Hamraoui, “Sputtering soft materials with molecular projectiles: a microscopic view,” Surface and Interface Analysis. 2011. link Times cited: 11 Abstract: The sputtering of bulk organic samples by molecular projecti… read moreAbstract: The sputtering of bulk organic samples by molecular projectiles is modeled using molecular dynamics simulations. A coarse‐grained representation of entangled polyethylene oligomers (1.4 kDa) is used as a model of an amorphous soft material. In this study, a variety of projectiles are compared, including C60, coronene and a series of polystyrene molecular cluster (0.6–110 kDa). The polystyrene clusters bridge the gap between the polyatomic ions (SF5, C60) used in secondary ion mass spectrometry (SIMS) and the large organic microdroplets generated, e.g. in desorption electrospray ionization. In addition, they allow us to explore a wide range of energies/nucleon (0.1–18 eV/nucleon) with projectiles of similar nature and the same total kinetic energy (10 keV). Two regions of sputtering can be distinguished. Above 1 eV/nucleon (smaller projectiles), the sputtering yield depends only on the total projectile energy and not on the projectile nuclearity. Below 1 eV/nucleon (larger projectiles), yields are influenced by both the projectile energy and their nuclearity. Larger projectiles also eject fewer fragments and induce significantly less damage in the sample. A region of intact molecular emission, without induced fragmentation, exists in the < 1 eV/nucleon range. For large clusters, an energy of < 1 eV/nucleon still provides a sputtered mass from the target that is larger than 10 kDa. This region of molecular emission with minimal fragmentation, also attainable with large gas clusters, offers new analytical perspectives. Copyright © 2010 John Wiley & Sons, Ltd. read less NOT USED (low confidence) M. Hamdi and A. Ferreira, “Characterization and Prototyping of Nanostructures.” 2011. link Times cited: 0 NOT USED (low confidence) R. Webb, B. Garrison, and J. Vickerman, “The effect of the H:C ratio on the sputtering of molecular solids by fullerenes,” Surface and Interface Analysis. 2011. link Times cited: 12 Abstract: The understanding of the process by which molecular solids a… read moreAbstract: The understanding of the process by which molecular solids are sputtered by keV clusters such as C60 is of great importance if cluster SIMS is to be routinely used to depth profile a wide range of molecular materials. Computer simulations of the impact of a C60 cluster on a molecular solid show that an impact crater is produced. At the edges of the crater, a reaction zone is created which contains fragmented and cross‐linked molecules. It has been shown previously that this ‘reaction zone’ can be extensive for a molecular material like fullerite, and yet, for benzene it appears to be smaller. It is well known that fullerite cross‐links through cycloaddition under compression in which the normal sp2 bonding in the fullerene molecules takes on a tetragonal sp3 pattern when two molecules are forced together creating a strong cross‐link between them. It is this process which leads to such an extensive reaction zone after impact. The presence of hydrogen in other molecular systems could resist this process. The purpose of the investigation reported here is to observe the nature of the reaction zone for different molecular systems with varying hydrogen content and different initial coordination. Molecular dynamics simulations of molecular solids of octane, octatetraene, benzene and fullerite struck by 15 keV C60 were performed. Octane is initially four‐fold coordinated, whilst the other molecular solids are all three‐fold coordinated. The reaction zone of the crater formed by the impact was measured and it was concluded that the H:C ratio influences the nature of the reaction zone, whereas the initial coordination has only a secondary effect on the reaction zone. Copyright © 2010 John Wiley & Sons, Ltd. read less NOT USED (low confidence) M. Buehler, “Computational Scale Linking in Biological Protein Materials.” 2010. link Times cited: 0 NOT USED (low confidence) S. Keten, J. Bertaud, D. Sen, Z. Xu, T. Ackbarow, and M. Buehler, “Multiscale Modeling of Biological Protein Materials – Deformation and Failure.” 2010. link Times cited: 1 NOT USED (low confidence) L. Ghiringhelli and E. Meijer, “Liquid carbon: Freezing line and structure near freezing.” 2010. link Times cited: 5 NOT USED (low confidence) B. Jeong and S. Sinnott, “Atomic-Scale Simulations of the Mechanical Behavior of Carbon Nanotube Systems.” 2010. link Times cited: 5 NOT USED (low confidence) F. Khademolhosseini, “NONLOCAL CONTINUUM SHELL MODELS FOR TORSION OF SINGLE-WALLED CARBON NANOTUBES.” 2009. link Times cited: 2 NOT USED (low confidence) R. Latour, “Molecular Simulation of Protein-Surface Interactions.” 2009. link Times cited: 12 NOT USED (low confidence) X. Mi and Y. Shi, “Elastic Properties of Mimetically Synthesized Model Nanoporous Carbon,” MRS Proceedings. 2009. link Times cited: 7 Abstract: Activated carbon is widely used for its attractive diffusion… read moreAbstract: Activated carbon is widely used for its attractive diffusion, adsorption and reaction properties. However, its mechanical behavior has received much less attention. We present a molecular dynamics simulation study on the elastic properties of activated carbon with nanometer-sized pores. The nanoporous carbon sample is composed of curved and defected graphene sheets, which is synthesized using quench molecular dynamics (QMD) method [1]. One unique feature of the current model is the mechanical stability, thus the bulk modulus, Young’s modulus, shear modulus and Poisson’s ratio can be obtained from simulated mechanical tests. By varying the density of the nanoporous carbon model, it was further found that the bulk modulus vs. density relation follows Gibson-Ashby type power law with exponents of 2.80 at low densities and 1.65 at high densities. read less NOT USED (low confidence) K. Irikura, “chapter 2 Obtaining Molecular Thermochemistry from Calculations,” Comprehensive Chemical Kinetics. 2007. link Times cited: 2 NOT USED (low confidence) J. Schall, P. Mikulski, G. M. Chateauneuf, G. Gao, and J. Harrison, “Molecular Dynamics Simulations of Tribology.” 2007. link Times cited: 8 NOT USED (low confidence) L. Zhang, “Stability analysis of atomic structures.” 2006. link Times cited: 2 Abstract: The stability and failure mechanism of a structure at the na… read moreAbstract: The stability and failure mechanism of a structure at the nanometer scale are important for understanding the mechanical behavior of nanoscale materials and structures. This thesis focuses on the material stability of atomic structures. First, the material stability of pristine carbon nanotubes is investigated at the continuum level by using the crystal elasticity theory. A homogenized continuum model is adopted. The strong ellipticity condition is employed to capture the localized failure of carbon nanotubes. The critical strain and strength predicted are reasonably comparable with experimental estimations. An atomic material stability theory is developed as the atomistic counterpart of the continuum material stability theory in nonlinear elasticity. A local instability indicator named ``atomic acoustic tensor'' is derived and utilized to detect material failure at the atomic scale. The stability criterion is based directly on the local energetic responses of an atomic site, and resorts to neither the continuum theory nor the pristine lattice. Thus, it is applicable to inhomogeneous atomic systems provided that the site energy can be reasonably defined. The atomic stability theory is combined with atomistic simulation to gain understanding on crack propagation and fracture as instabilities of bond structures. The atomic acoustic tensor is used as the indicator to detect the local instability at the crack tip, and then to decide bond breaking. Quasi-static crack growth till fracture is simulated by the atomistic finite element method, which is proposed according to the form of bond potential and lattice topology. An Eshelby-type approximate method is presented for calculating the formation energy of Stone-Wales defects. A formula is derived to show that the energy variation consists of the change of local atomic potential due to bond reconfiguration in the defective region and a higher order correction that represents the influence of the read less NOT USED (low confidence) V. Coluci, S. Dantas, A. Jorio, and D. S. Galvão, “Electronic And Mechanical Properties Of Super Carbon Nanotube Networks,” Scopus. 2006. link Times cited: 2 NOT USED (low confidence) M. Elert, S. Zybin, and C. T. White, “Shock-Induced Chemistry in Hydrocarbon Molecular Solids,” ChemInform. 2005. link Times cited: 1 NOT USED (low confidence) A. Violi, G. Voth, and A. Sarofim, “The relative roles of acetylene and aromatic precursors during soot particle inception.” 2004. link Times cited: 32 NOT USED (low confidence) M. Medvedeva and B. Garrison, “Comparative Study of Low Energy C and O Atoms Impact in a Hydrocarbon Surface.” 2004. link Times cited: 0 NOT USED (low confidence) M. Müser and M. Robbins, “Atomistic Computer Simulations of Nanotribology.” 2004. link Times cited: 3 NOT USED (low confidence) S. Stuart, B. Dickson, B. Sumpter, and D. W. Noid, “Computational Study of Polymerization in Carbon Nanotubes,” MRS Proceedings. 2000. link Times cited: 2 NOT USED (low confidence) S. Stuart, B. Dickson, D. W. Noid, and B. Sumpter, “Hydrocarbon Reactions in Carbon Nanotubes: Pyrolysis,” MRS Proceedings. 2000. link Times cited: 0 NOT USED (high confidence) G. A. Marchant, M. A. Caro, B. Karasulu, and L. Pártay, “Exploring the configuration space of elemental carbon with empirical and machine learned interatomic potentials,” npj Computational Materials. 2023. link Times cited: 1 NOT USED (high confidence) L. A. R. Júnior, M. L. P. Júnior, and A. F. Fonseca, “Elastocaloric Effect in Graphene Kirigami.,” Nano letters. 2023. link Times cited: 1 Abstract: Kirigami, a traditional Japanese art of paper cutting, has r… read moreAbstract: Kirigami, a traditional Japanese art of paper cutting, has recently been explored for its elastocaloric effect (ECE) in kirigami-based materials (KMs), where an applied strain induces temperature changes. Importantly, the feasibility of a nanoscale graphene kirigami monolayer was experimentally demonstrated. Here, we investigate the ECE in GK representing the thinnest possible KM to better understand this phenomenon. Through molecular dynamics simulations, we analyze the temperature change and coefficient of performance (COP) of GK. Our findings reveal that while GKs lack the intricate temperature changes observed in macroscopic KMs, they exhibit a substantial temperature change of approximately 9.32 K (23 times higher than that of macroscopic KMs, which is about 0.4 K) for heating and -3.50 K for cooling. Furthermore, they demonstrate reasonable COP values of approximately 1.57 and 0.62, respectively. It is noteworthy that the one-atom-thick graphene configuration prevents the occurrence of the complex temperature distribution observed in macroscopic KMs. read less NOT USED (high confidence) M. Gatchell, H. Zettergren, and K. Hansen, “The largest fullerene.,” Physical chemistry chemical physics : PCCP. 2023. link Times cited: 0 Abstract: Fullerenes are lowest energy structures for gas phase all-ca… read moreAbstract: Fullerenes are lowest energy structures for gas phase all-carbon particles for a range of sizes, but graphite remains the lowest energy allotrope of bulk carbon. This implies that the lowest energy structure changes nature from fullerenes to graphite or graphene at some size and therefore, in turn, implies a limit on the size of free fullerenes as ground state structures. We calculate this largest stable single shell fullerene to be of size N = 1 × 104, using the AIREBO effective potential. Above this size fullerene onions are more stable, with an energy per atom that approaches graphite structures. Onions and graphite have very similar ground state energies, raising the intriguing possibility that fullerene onions could be the lowest free energy states of large carbon particles in some temperature range. read less NOT USED (high confidence) S. Eskandari, J. Koltai, I. László, M. Vaezi, and J. Kürti, “Formation of nanoribbons by carbon atoms confined in a single-walled carbon nanotube-A molecular dynamics study.,” The Journal of chemical physics. 2023. link Times cited: 0 Abstract: Carbon nanotubes can serve as one-dimensional nanoreactors f… read moreAbstract: Carbon nanotubes can serve as one-dimensional nanoreactors for the in-tube synthesis of various nanostructures. Experimental observations have shown that chains, inner tubes, or nanoribbons can grow by the thermal decomposition of organic/organometallic molecules encapsulated in carbon nanotubes. The result of the process depends on the temperature, the diameter of the nanotube, and the type and amount of material introduced inside the tube. Nanoribbons are particularly promising materials for nanoelectronics. Motivated by recent experimental results observing the formation of carbon nanoribbons inside carbon nanotubes, molecular dynamics calculations were performed with the open source LAMMPS code to investigate the reactions between carbon atoms confined within a single-walled carbon nanotube. Our results show that the interatomic potentials behave differently in quasi-one-dimensional simulations of nanotube-confined space than in three-dimensional simulations. In particular, the Tersoff potential performs better than the widely used Reactive Force Field potential in describing the formation of carbon nanoribbons inside nanotubes. We also found a temperature window where the nanoribbons were formed with the fewest defects, i.e., with the largest flatness and the most hexagons, which is in agreement with the experimental temperature range. read less NOT USED (high confidence) W. Brandão, J. D. Sousa, A. L. Aguiar, D. Galvão, L. A. Ribeiro, and A. F. Fonseca, “First-principles and reactive molecular dynamics study of the elastic properties of pentahexoctite-based nanotubes,” Mechanics of Materials. 2023. link Times cited: 2 NOT USED (high confidence) F. Polewczyk, J.-M. Leyssale, and P. Lafourcade, “Temperature-dependent elasticity of single crystalline graphite,” Computational Materials Science. 2023. link Times cited: 1 NOT USED (high confidence) H. Zhai and J. Yeo, “Multiscale mechanics of thermal gradient coupled graphene fracture: A molecular dynamics study,” International Journal of Applied Mechanics. 2022. link Times cited: 2 Abstract: The thermo-mechanical coupling mechanism of graphene fractur… read moreAbstract: The thermo-mechanical coupling mechanism of graphene fracture under thermal gradients possesses rich applications whereas is hard to study due to its coupled non-equilibrium nature. We employ non-equilibrium molecular dynamics to study the fracture of graphene by applying a fixed strain rate under different thermal gradients by employing different potential fields. It is found that for AIREBO and AIREBO-M, the fracture stresses do not strictly follow the positive correlations with the initial crack length. Strain-hardening effects are observed for"REBO-based"potential models of small initial defects, which is interpreted as blunting effect observed for porous graphene. The temperature gradients are observed to not show clear relations with the fracture stresses and crack propagation dynamics. Quantized fracture mechanics verifies our molecular dynamics calculations. We provide a unique perspective that the transverse bond forces share the loading to account for the nonlinear increase of fracture stress with shorter crack length. Anomalous kinetic energy transportation along crack tips is observed for"REBO-based"potential models, which we attribute to the high interatomic attractions in the potential models. The fractures are honored to be more"brittle-liked"carried out using machine learning interatomic potential (MLIP), yet incapable of simulating post-fracture dynamical behaviors. The mechanical responses using MLIP are observed to be not related to temperature gradients. The temperature configuration of equilibration simulation employing the dropout uncertainty neural network potential with a dropout rate of 0.1 is reported to be the most accurate compared with the rest. This work is expected to inspire further investigation of non-equilibrium dynamics in graphene with practical applications in various engineering fields. read less NOT USED (high confidence) M. Qamar, M. Mrovec, Y. Lysogorskiy, A. Bochkarev, and R. Drautz, “Atomic Cluster Expansion for Quantum-Accurate Large-Scale Simulations of Carbon.,” Journal of chemical theory and computation. 2022. link Times cited: 17 Abstract: We present an atomic cluster expansion (ACE) for carbon that… read moreAbstract: We present an atomic cluster expansion (ACE) for carbon that improves over available classical and machine learning potentials. The ACE is parametrized from an exhaustive set of important carbon structures over extended volume and energy ranges, computed using density functional theory (DFT). Rigorous validation reveals that ACE accurately predicts a broad range of properties of both crystalline and amorphous carbon phases while being several orders of magnitude more computationally efficient than available machine learning models. We demonstrate the predictive power of ACE on three distinct applications: brittle crack propagation in diamond, the evolution of amorphous carbon structures at different densities and quench rates, and the nucleation and growth of fullerene clusters under high-pressure and high-temperature conditions. read less NOT USED (high confidence) R. Kheiri and A. Tsukanov, “Thermal activation of dry sliding friction at the nano-scale,” PHYSICAL MESOMECHANICS OF CONDENSED MATTER: Physical Principles of Multiscale Structure Formation and the Mechanisms of Nonlinear Behavior: MESO2022. 2022. link Times cited: 0 Abstract: Molecular dynamic (MD) simulations are applied to investigat… read moreAbstract: Molecular dynamic (MD) simulations are applied to investigate the dependency of the kinetic friction coefficient on the temperature at the nano-scale. The system is comprised of an aluminum spherical particle consisting of 32000 atoms in an FCC lattice sliding on a stack of several layers of graphene, and the simulations have done using LAMMPS. The interaction potential is charge-optimized many-body (COMB3) potential and a Langevin thermostat keep the system at a nearly constant temperature. With an assumption of linear viscous friction, $F_{fr}= - \gamma v$, the kinetic friction coefficient $\gamma$ is derived and plotted at different temperatures in the interval of $T \in [1, 600] K$. As a result, by increasing temperature, the kinetic friction coefficient is decreased. Consequently, while the friction is assumed as a linear viscous model, the results are similar to the thermal activation in atomic-scale friction. That is, (1) by increasing sliding velocity friction force will be increased and (2) by increasing temperature, kinetic friction coefficient decreases. read less NOT USED (high confidence) Z. Fthenakis, I. Petsalakis, V. Tozzini, and N. Lathiotakis, “Evaluating the performance of ReaxFF potentials for sp2 carbon systems (graphene, carbon nanotubes, fullerenes) and a new ReaxFF potential,” Frontiers in Chemistry. 2022. link Times cited: 7 Abstract: We study the performance of eleven reactive force fields (Re… read moreAbstract: We study the performance of eleven reactive force fields (ReaxFF), which can be used to study sp2 carbon systems. Among them a new hybrid ReaxFF is proposed combining two others and introducing two different types of C atoms. The advantages of that potential are discussed. We analyze the behavior of ReaxFFs with respect to 1) the structural and mechanical properties of graphene, its response to strain and phonon dispersion relation; 2) the energetics of (n, 0) and (n, n) carbon nanotubes (CNTs), their mechanical properties and response to strain up to fracture; 3) the energetics of the icosahedral C60 fullerene and the 40 C40 fullerene isomers. Seven of them provide not very realistic predictions for graphene, which made us focusing on the remaining, which provide reasonable results for 1) the structure, energy and phonon band structure of graphene, 2) the energetics of CNTs versus their diameter and 3) the energy of C60 and the trend of the energy of the C40 fullerene isomers versus their pentagon adjacencies, in accordance with density functional theory (DFT) calculations and/or experimental data. Moreover, the predicted fracture strain, ultimate tensile strength and strain values of CNTs are inside the range of experimental values, although overestimated with respect to DFT. However, they underestimate the Young’s modulus, overestimate the Poisson’s ratio of both graphene and CNTs and they display anomalous behavior of the stress - strain and Poisson’s ratio - strain curves, whose origin needs further investigation. read less NOT USED (high confidence) H. Zhang and J. Guilleminot, “A Riemannian stochastic representation for quantifying model uncertainties in molecular dynamics simulations,” Computer Methods in Applied Mechanics and Engineering. 2022. link Times cited: 2 NOT USED (high confidence) Z. El-Machachi, M. Wilson, and V. L. Deringer, “Exploring the configurational space of amorphous graphene with machine-learned atomic energies,” Chemical Science. 2022. link Times cited: 4 Abstract: Two-dimensionally extended amorphous carbon (“amorphous grap… read moreAbstract: Two-dimensionally extended amorphous carbon (“amorphous graphene”) is a prototype system for disorder in 2D, showing a rich and complex configurational space that is yet to be fully understood. Here we explore the nature of amorphous graphene with an atomistic machine-learning (ML) model. We create structural models by introducing defects into ordered graphene through Monte-Carlo bond switching, defining acceptance criteria using the machine-learned local, atomic energies associated with a defect, as well as the nearest-neighbor (NN) environments. We find that physically meaningful structural models arise from ML atomic energies in this way, ranging from continuous random networks to paracrystalline structures. Our results show that ML atomic energies can be used to guide Monte-Carlo structural searches in principle, and that their predictions of local stability can be linked to short- and medium-range order in amorphous graphene. We expect that the former point will be relevant more generally to the study of amorphous materials, and that the latter has wider implications for the interpretation of ML potential models. read less NOT USED (high confidence) G. Paredes et al., “Texture, Nanotexture, and Structure of Carbon Nanotube-Supported Carbon Cones.,” ACS nano. 2022. link Times cited: 6 Abstract: Graphene-based carbon micro-/nano-cones were prepared by dep… read moreAbstract: Graphene-based carbon micro-/nano-cones were prepared by depositing pyrolytic carbon onto individual carbon nanotubes as supports using a specific chemical vapor deposition process. They were investigated by means of high-resolution scanning electron microscopy, low-voltage aberration-corrected transmission electron microscopy, Raman spectroscopy, and molecular dynamics modeling. While the graphenes were confirmed to be perfect, the cone texture was determined to be preferably scroll-like, with the scroll turns being parallel to the cone axis. Correspondingly, many of the concentrically displayed graphenes (actually scroll turns) exhibit the same helicity vector. When radii of curvature are large enough, this could allow for coherent stacking to locally take place in spite of the lattice shift induced by the curvature. A particular care was taken on investigating the cone apexes, in which a specific type of graphene termination was observed, here designated as the "zip" defect. Calculations determined a plausible stable structure that such a defect type may correspond to. This defect was found to generate a very low Raman ID/ID' band ratio (1.5), for which physical reasons are proposed. Combining our results and that of the literature allowed proposing an identification chart for a variety of defects able to affect the graphene lattice or edges. read less NOT USED (high confidence) K. Ahmad, Q. Yang, and A. Martini, “Simulations of Friction Anisotropy on Self-Assembled Monolayers in Water.,” Langmuir : the ACS journal of surfaces and colloids. 2022. link Times cited: 0 Abstract: Molecular dynamics simulations were performed to study nanos… read moreAbstract: Molecular dynamics simulations were performed to study nanoscale friction on hydrophilic and hydrophobic self-assembled monolayers (SAMs) immersed in water. Sliding was simulated in two different directions to capture anisotropy due to the direction of motion relative to the inherent tilted orientation of the molecules. It was shown that friction depends on both hydrophobicity and sliding direction, with the highest friction observed for sliding on hydrophobic SAM in the direction against the initial orientation of the molecules. The origins of the friction trends were analyzed by differentiating the tip-SAM and tip-water force contributions to friction. The tip-water force was higher on the hydrophilic SAM, and this was shown to be due to the presence of a dense layer of water adjacent to the surface and hydrogen bonding. In contrast, the tip-SAM force was higher on the hydrophobic SAM due to a water depletion layer, which enabled the tip to be closer to the SAM terminal group. The higher-friction cases all exhibited greater penetration of the tip below the surface of the SAM, accommodated by further tilting and reorientation of the SAM molecules. read less NOT USED (high confidence) J. T. Willman et al., “Machine learning interatomic potential for simulations of carbon at extreme conditions,” Physical Review B. 2022. link Times cited: 10 Abstract: A Spectral Neighbor Analysis (SNAP) machine learning interat… read moreAbstract: A Spectral Neighbor Analysis (SNAP) machine learning interatomic potential (MLIP) has been developed for simulations of carbon at extreme pressures (up to 5 TPa) and temperatures (up to 20,000 K). This was achieved using a large database of experimentally relevant quantum molecular dynamics (QMD) data, training the SNAP potential using a robust machine learning methodology, and performing extensive validation against QMD and experimental data. The resultant carbon MLIP demonstrates unprecedented accuracy and transferability in predicting the carbon phase diagram, melting curves of crystalline phases, and the shock Hugoniot, all within 3% of QMD. By achieving quantum accuracy and efficient implementation on leadership class high performance computing systems, SNAP advances frontiers of classical MD simulations by enabling atomic-scale insights at experimental time and length scales. read less NOT USED (high confidence) W. Peng, K. Sun, and P. Onck, “Structure-property relations of three-dimensional nanoporous template-based graphene foams,” Extreme Mechanics Letters. 2022. link Times cited: 4 NOT USED (high confidence) G. S. Dhaliwal, P. Nair, and C. V. Singh, “Machine learned interatomic potentials using random features,” npj Computational Materials. 2022. link Times cited: 10 NOT USED (high confidence) C. Sun, C. Liu, K. Luo, and B. Bai, “Quasi-Unidirectional Transport Bilayer Two-Dimensional Nanopores for Highly-Efficient Molecular Sieving,” Frontiers in Energy Research. 2021. link Times cited: 0 Abstract: Two-dimensional nanopores are very promising for high-permea… read moreAbstract: Two-dimensional nanopores are very promising for high-permeance molecular sieving, but the molecular backflow from permeate-side to feed-side is not beneficial for improving molecular permeance. We study the quasi-unidirectional molecular transport through a graphene-hexagonal boron nitride bilayer nanopore, aiming to realize a high-permeance molecular sieving. Molecular dynamics simulations of CO2/CH4 separations show that the bilayer pore presents 3.7 times higher selectivity comparing to the single-layer graphene nanopore with the same size. The quasi-unidirectional molecular transport is attributed to the distinctive adsorption abilities of gas molecules on the two sides of bilayer nanopores and the inhibited molecular backflow from permeate-side to feed-side. This work provides a promising way to realize the ultra-permeable porous membranes with molecular permeance even higher than the single-layer atomic-thickness membranes. read less NOT USED (high confidence) Z. Wei, K. Lin, X. Wang, and Y.-pu Zhao, “Peeling of graphene/molybdenum disulfide heterostructure at different angles: A continuum model with accommodations for van der Waals interaction,” Composites Part A-applied Science and Manufacturing. 2021. link Times cited: 7 NOT USED (high confidence) S. Nasiri, K. Wang, M. Yang, J. Gu’enol’e, Q. Li, and M. Zaiser, “Atomistic Aspects of Load Transfer and Fracture in CNT-Reinforced Aluminium,” SSRN Electronic Journal. 2021. link Times cited: 6 Abstract: This paper describes atomistic simulations of deformation an… read moreAbstract: This paper describes atomistic simulations of deformation and fracture of Al reinforced with carbon nanotubes (CNTs). We use density functional theory (DFT) to understand the energetics of Al-graphene interfaces and gain reference data for the parameterization of Al-C empirical potentials. We then investigate the load transfer between CNTs and Al and its effect on composite strengthening. To this end, we perform uniaxial tensile simulations of an Al crystal reinforced with CNTs of various volume fractions. We also study the interaction of the embedded CNTs with a crack. We show that the interaction between CNTs and Al is weak such that, under tensile loading, CNTs can easily slide inside the Al matrix and get pulled out from the cracked surface. This effect is almost independent of CNT length and volume fraction. Little load transfer and consequently no crack bridging are observed during the simulation of pristine CNTs threading the crack surfaces. CNTs that are geometrically fixated inside Al, on the other hand, can increase the fracture stress and enhance plastic dissipation in the matrix. CNTs located in front of a growing crack blunt the crack and induce plastic deformation of the Al matrix. Depending on the CNT orientation, these processes can either increase or decrease the failure stress of the composite. read less NOT USED (high confidence) X. Wu and X. Zhu, “Molecular dynamics simulations of ion beam irradiation on graphene/MoS2 heterostructure,” Scientific Reports. 2021. link Times cited: 6 NOT USED (high confidence) J. G. Mchugh, P. Mouratidis, A. Impellizzeri, K. Jolley, D. Erbahar, and C. Ewels, “Prismatic Edge Dislocations in Graphite,” MatSciRN EM Feeds. 2021. link Times cited: 9 Abstract: Dislocations are a central concept in materials science, whi… read moreAbstract: Dislocations are a central concept in materials science, which dictate the plastic deformation and damage evolution in materials. Layered materials such as graphite admit two general types of interlayer dislocations: basal and prismatic dislocations, of which prismatic dislocations have been relatively less studied. Using density functional theory (DFT) calculations, we have examined different prismatic core structures in graphite and evaluated their structure, energetics and mobility. We find close energetic interplay between bonded and “free-standing” core structures in both zigzag and armchair directions, with a reconstructed stable zigzag core identified. We explore grain boundaries and prismatic dislocation pile-up, identifying metastable structures which may be important in energy storage. The role of interlayer stacking in core structure, dislocation glide and climb is also considered in-depth. Our calculations suggest that the prismatic dislocation core is stable up to high temperatures of approximately 1500K in bulk graphite. Above this temperature, the breaking of bonds in the dislocation core can facilitate climb, grain-boundary motion, and the annealing of damage through prismatic dislocation glide. read less NOT USED (high confidence) P. Brault, M. Ji, D. Sciacqua, F. Poncin‐Epaillard, J. Berndt, and E. Kovačević, “Insight into acetylene plasma deposition using molecular dynamics simulations,” Plasma Processes and Polymers. 2021. link Times cited: 4 NOT USED (high confidence) L. Fiedler, K. Shah, M. Bussmann, and A. Cangi, “Deep dive into machine learning density functional theory for materials science and chemistry,” Physical Review Materials. 2021. link Times cited: 18 Abstract: With the growth of computational resources, the scope of ele… read moreAbstract: With the growth of computational resources, the scope of electronic structure simulations has increased greatly. Artificial intelligence and robust data analysis hold the promise to accelerate large-scale simulations and their analysis to hitherto unattainable scales. Machine learning is a rapidly growing field for the processing of such complex datasets. It has recently gained traction in the domain of electronic structure simulations, where density functional theory takes the prominent role of the most widely used electronic structure method. Thus, DFT calculations represent one of the largest loads on academic high-performance computing systems across the world. Accelerating these with machine learning can reduce the resources required and enables simulations of larger systems. Hence, the combination of density functional theory and machine learning has the potential to rapidly advance electronic structure applications such as in-silico materials discovery and the search for new chemical reaction pathways. We provide the theoretical background of both density functional theory and machine learning on a generally accessible level. This serves as the basis of our comprehensive review including research articles up to December 2020 in chemistry and materials science that employ machine-learning techniques. In our analysis, we categorize the body of research into main threads and extract impactful results. We conclude our review with an outlook on exciting research directions in terms of a citation analysis. read less NOT USED (high confidence) A. Tsukanov and N. Brilliantov, “Collision of nanoparticles of covalently bound atoms: Impact of stress-dependent adhesion.,” Physical review. E. 2021. link Times cited: 3 Abstract: The impact of nanoparticles (NPs) composed of atoms with cov… read moreAbstract: The impact of nanoparticles (NPs) composed of atoms with covalent bonding is investigated numerically and theoretically. We use recent models of covalent bonding of carbon atoms and elaborate a numerical model of amorphous carbon (a-C) NPs, which may be applied for modeling soot particles. We compute the elastic moduli of the a-C material which agree well with the available data. We reveal an interesting phenomenon-stress-dependent adhesion, which refers to stress-enhanced formation of covalent bonds between contacting surfaces. We observe that the effective adhesion coefficient linearly depends on the maximal stress between the surfaces and explain this dependence. We compute the normal restitution coefficient for colliding NPs and explore the dependence of the critical velocity, demarcating bouncing and aggregative collisions, on the NP radius. Using the obtained elastic and stress-dependent adhesive coefficients we develop a theory for the critical velocity. The predictions of the theory agree very well with the simulation results. read less NOT USED (high confidence) J. Wu, L. Bai, J. Huang, L. Ma, J. Liu, and S. Liu, “Accurate force field of two-dimensional ferroelectrics from deep learning,” Physical Review B. 2021. link Times cited: 14 Abstract: The discovery of two-dimensional (2D) ferroelectrics with sw… read moreAbstract: The discovery of two-dimensional (2D) ferroelectrics with switchable out-of-plane polarization such as monolayer α-In2Se3 offers a new avenue for ultrathin high-density ferroelectric-based nanoelectronics such as ferroelectric field effect transistors and memristors. The functionality of ferroelectrics depends critically on the dynamics of polarization switching in response to an external electric/stress field. Unlike the switching dynamics in bulk ferroelectrics that have been extensively studied, the mechanisms and dynamics of polarization switching in 2D remain largely unexplored. Molecular dynamics (MD) using classical force fields is a reliable and efficient method for largescale simulations of dynamical processes with atomic resolution. Here we developed a deep neural network-based force field of monolayer In2Se3 using a concurrent learning procedure that efficiently updates the first-principles-based training database. The model potential has accuracy comparable with density functional theory (DFT), capable of predicting a range of thermodynamic properties of In2Se3 polymorphs and lattice dynamics of ferroelectric In2Se3. Pertinent to the switching dynamics, the model potential also reproduces the DFT kinetic pathways of polarization reversal and 180◦ domain wall motions. Moreover, isobaric-isothermal ensemble MD simulations predict a temperature-driven α → β phase transition at the single-layer limit, as revealed by both local atomic displacement and Steinhardt’s bond orientational order parameter Q4. Our work paves the way for further research on the dynamics of ferroelectric α-In2Se3 and related systems. ∗ These two authors contributed equally † liushi@westlake.edu.cn read less NOT USED (high confidence) P. N. Babu, S. Dixit, and S. Pal, “Atomistic simulation of crack propagation in CNT reinforced nanocrystalline aluminum under uniaxial tensile loading,” Philosophical Magazine. 2021. link Times cited: 2 Abstract: ABSTRACT A molecular dynamics simulation-based study has bee… read moreAbstract: ABSTRACT A molecular dynamics simulation-based study has been performed to examine the deformation behaviour of the predetermined parallel and perpendicular centreline cracks in CNTs embedded nanocrystalline aluminum (CNTs-NC Al) composite specimens under uniaxial loading. The hybrid potential (i.e. EAM, AIREBO, and LJ) method is adopted for carrying out the tensile deformation at three different temperatures (such as 10 K, 300 K, and 653 K). The mechanical properties are evaluated for both cases of parallel and perpendicular cracks of NC Al and CNTs-NC Al specimens. (30,30) CNT-NC Al specimen has shown superior fracture strain and ultimate tensile strength (UTS) at low temperature, whereas, higher fracture strain and lower UTS at high temperature than NC Al specimen. The mechanical properties of CNTs-NC Al nanocomposites are affected by the pre-existing crack and loading direction. The CNTs-NC Al nanocomposite specimens have exhibited the highest dislocation density compared to the NC Al specimen. The Shockley partial dislocations are a major driving factor for the parallel and perpendicular cracks of both (NC Al and CNTs-NC Al) specimens. The structural evolution and defect variation (such as stacking faults interaction with various dislocations, twin boundary, and grain boundary widening) has been elucidated during the tensile deformation of NC Al and CNT-NC Al nanocomposites. read less NOT USED (high confidence) J. Hur, Y. Abousleiman, K. Hull, and M. J. A. Qomi, “Reactive force fields for modeling oxidative degradation of organic matter in geological formations,” RSC Advances. 2021. link Times cited: 1 Abstract: In an attempt to better explore organic matter reaction and … read moreAbstract: In an attempt to better explore organic matter reaction and properties, at depth, to oxidative fluid additives, we have developed a new ReaxFF potential to model and describe the oxidative decompositions of aliphatic and aromatic hydrocarbons in the presence of the oxychlorine ClOn− oxidizers. By carefully adjusting the new H/C/O/Cl parameters, we show that the potential energies in both training and validation sets correlate well with calculated density functional theory (DFT) energies. Our parametrization yields a reliable empirical reactive force field with an RMS error of ∼1.57 eV, corresponding to a 1.70% average error. At this accuracy level, the reactive force field provides a reliable atomic-level picture of thermodynamically favorable reaction pathways governing oxidative degradation of H/C/O/Cl compounds. We demonstrate this capability by studying the structural degradation of small aromatic and aliphatic hydrocarbons in the presence of oxychlorine oxidizers in aqueous environments. We envision that such reactive force fields will be critical in understanding the oxidation processes of organic matter in geological reservoirs and the design of the next generation of reactive fluids for enhanced shale gas recovery and improved carbon dioxide adsorption and sequestration. read less NOT USED (high confidence) F. Dias and W. S. Machado, “Investigation of the thermal conductivity of tetrabenzo[8]circulene (TB8C) by molecular dynamics simulation,” Molecular Simulation. 2021. link Times cited: 5 Abstract: ABSTRACT In this work we investigated the thermal conductivi… read moreAbstract: ABSTRACT In this work we investigated the thermal conductivity of tetrabenzo[8]circulene (TB8C) through the Equilibrium Molecular Dynamics (EMD) simulations. Through this investigation we propose an estimated value for the thermal conductivity of TB8C not yet reported in the literature. The TB8C thermal conductivity was simulated for different temperatures. We compared the average thermal conductivity value, (216 ± 2) W m−1 K−1 with the simulated thermal conductivity of graphene, carbon nanotube and C80H30 molecule, reported in the literature. This comparison suggests that the size and structure containing defects of TB8C, in relation to the intrinsic graphene plane hexagonal structure model, are responsible for its good thermal conductivity. To clarify the mechanism of the thermal behaviour of TB8C, we calculated the Phonon Density of States (PHDOS) and compared with C80H30 and graphene. When compared to graphene, a higher phonon density of state is observed for the TB8C in the frequency range from 0 to 10 THz, which may be an explanation for the high thermal conductivity of the TB8C. By calculating the group velocity, we proposed the hypothesis that the lifetime of phonons, for TB8C, should be greater than that of graphene and proposed that thermal transport should occur, predominantly, in ballistic form. read less NOT USED (high confidence) M. Wen, Y. Afshar, R. Elliott, and E. Tadmor, “KLIFF: A framework to develop physics-based and machine learning interatomic potentials,” Comput. Phys. Commun. 2021. link Times cited: 12 NOT USED (high confidence) A. Paajanen, A. Rinta-Paavola, and J. Vaari, “High-temperature decomposition of amorphous and crystalline cellulose: reactive molecular simulations,” Cellulose. 2021. link Times cited: 10 NOT USED (high confidence) M. Suk, “Effect of the Nanotube Radius and the Volume Fraction on the Mechanical Properties of Carbon Nanotube-Reinforced Aluminum Metal Matrix Composites,” Molecules. 2021. link Times cited: 7 Abstract: By using the advantages of carbon nanotubes (CNTs), such as … read moreAbstract: By using the advantages of carbon nanotubes (CNTs), such as their excellent mechanical properties and low density, CNT-reinforced metal matrix composites (MMCs) are expected to overcome the limitations of conventional metal materials, i.e., their high density and low ductility. To understand the behavior of composite materials, it is necessary to observe the behavior at the molecular level and to understand the effect of various factors, such as the radius and content of CNTs. Therefore, in this study, the effect of the CNT radius and content on the mechanical properties of CNT-Al composites was observed using a series of molecular dynamics simulations, particularly focusing on MMCs with a high CNT content and large CNT diameter. The mechanical properties, such as the strength and stiffness, were increased with an increasing CNT radius. As the CNT content increased, the strength and stiffness increased; however, the fracture strain was not affected. The behavior of double-walled carbon nanotubes (DWNTs) and single-walled carbon nanotubes (SWNTs) was compared through the decomposition of the stress–strain curve and observations of the atomic stress field. The fracture strain increased significantly for SWNT-Al as the tensile force was applied in the axial direction of the armchair CNTs. In the case of DWNTs, an early failure was initiated at the inner CNTs. In addition, the change in the elastic modulus according to the CNT content was predicted using the modified rule of mixture. This study is expected to be useful for the design and development of high-performance MMCs reinforced by CNTs. read less NOT USED (high confidence) H. Loulijat and H. Moustabchir, “A Study of the Effects of Graphene Nanosheets on the Thermal Conductivity of Nanofluid (Argon-Graphene) Using Reverse Nonequilibrium Molecular Dynamics Method,” International Journal of Thermophysics. 2021. link Times cited: 3 NOT USED (high confidence) B. Mortazavi, “Ultrahigh thermal conductivity and strength in direct-gap semiconducting graphene-like BC6N: A first-principles and classical investigation.” 2021. link Times cited: 35 NOT USED (high confidence) C. Xing, J. Sheng, L. Wang, and W. Fei, “Research progress in molecular dynamics simulation of CNT and graphene reinforced metal matrix composites.” 2021. link Times cited: 4 Abstract:
Carbon nanomaterials are considered as one of the ideal ch… read moreAbstract:
Carbon nanomaterials are considered as one of the ideal choices for high-performance metal matrix composite reinforcements and one of the key directions of scientific research in recent years. Molecular dynamics simulation could be used conveniently to construct different composite material systems and study the properties of carbon nanomaterials reinforced metal matrix composites under different conditions. This review mainly introduces the molecular dynamic research progress of carbon nanotube (CNT) and graphene-reinforced metal (Cu, Al, Ni) composites. The potential functions of the carbon nanomaterials reinforced metal matrix composite simulation systems are briefly introduced. The dependence of the mechanical properties of metal matrix composites on the sizes, volume fraction and distribution states of CNT and graphene is detailed and discussed. Finally, we briefly summarize the future development direction of the molecular dynamic simulation with respect to carbon nanomaterials reinforced metal matrix composites. read less NOT USED (high confidence) C.-gen Qian, B. Mclean, D. Hedman, and F. Ding, “A comprehensive assessment of empirical potentials for carbon materials,” APL Materials. 2021. link Times cited: 22 Abstract: Carbon materials and their unique properties have been exten… read moreAbstract: Carbon materials and their unique properties have been extensively studied by molecular dynamics, thanks to the wide range of available carbon bond order potentials (CBOPs). Recently, with the increase in popularity of machine learning (ML), potentials such as Gaussian approximation potential (GAP), trained using ML, can accurately predict results for carbon. However, selecting the right potential is crucial as each performs differently for different carbon allotropes, and these differences can lead to inaccurate results. This work compares the widely used CBOPs and the GAP-20 ML potential with density functional theory results, including lattice constants, cohesive energies, defect formation energies, van der Waals interactions, thermal stabilities, and mechanical properties for different carbon allotropes. We find that GAP-20 can more accurately predict the structure, defect properties, and formation energies for a variety of crystalline phase carbon compared to CBOPs. Importantly, GAP-20 can simulate the thermal stability of C60 and the fracture of carbon nanotubes and graphene accurately, where CBOPs struggle. However, similar to CBOPs, GAP-20 is unable to accurately account for van der Waals interactions. Despite this, we find that GAP-20 outperforms all CBOPs assessed here and is at present the most suitable potential for studying thermal and mechanical properties for pristine and defective carbon. read less NOT USED (high confidence) A. Savin, “Eigenmodes and resonance vibrations of graphene nanomembranes,” Physical Review B. 2021. link Times cited: 3 NOT USED (high confidence) H. Zettergren et al., “Roadmap on dynamics of molecules and clusters in the gas phase,” The European Physical Journal D. 2021. link Times cited: 22 NOT USED (high confidence) L. Safina and R. Murzaev, “SIZE OF METAL NANOPARTICLES AS A DECISIVE
FACTOR IN THE FORMATION OF NICKEL – GRAPHENE
COMPOSITE: MOLECULAR DYNAMICS,” Journal of Structural Chemistry. 2021. link Times cited: 2 NOT USED (high confidence) Q. Zhang, X. Pang, and Y. Zhao, “Effect of the External Velocity on the Exfoliation Properties of Graphene from Amorphous SiO2 Surface,” Crystals. 2021. link Times cited: 4 Abstract: External action has a significant influence on the formation… read moreAbstract: External action has a significant influence on the formation of high-quality graphene and the adhesion of graphene on the surface of the MEMS/NEMS device. The atomic-scale simulation and calculation can further study the exfoliation process of graphene by external actions. In multilayer graphene systems where graphene layers were simulated weakly contacted with SiO2 substrate, a constant vertical upward velocity (Vup) was applied to the topmost layer. Then two critical velocities were found, and three kinds of distinct exfoliation processes determined by critical upward velocities were observed in multilayer graphene systems. The first critical velocities are in the range of 0.5 Å/ps–3.18 Å/ps, and the second critical velocities are in the range of 9.5 Å/ps–12.1 Å/ps. When the Vup is less than the first critical velocity, all graphene layers will not be exfoliated. When Vup is between the first and second critical Vup, all layers can be exfoliated almost synchronously at last. When Vup is larger than the second critical Vup, the topmost layer can be exfoliated alone, transferring energy to the underlying layers, and the underlying layers are slowly exfoliated. The maximum exfoliation force to exfoliate the topmost layer of graphene is 3200 times larger than that of all graphene layers. Moreover, it is required 149.26 mJ/m2 to get monolayer graphene from multilayers, while peeling off all layers without effort. This study explains the difficulty to get monolayer graphene and why graphene falls off easily during the transfer process. read less NOT USED (high confidence) A. F. Fonseca, “Twisting or untwisting graphene twisted nanoribbons without rotation,” Physical Review B. 2021. link Times cited: 3 Abstract: The common sense regarding twisting or untwisting a ribbon i… read moreAbstract: The common sense regarding twisting or untwisting a ribbon is that it requires the application of an external rotation to happen. However, at nanoscale, the application of precise amounts of rotation on a nanoribbon is not a trivial task. Here, the concept of an alternative method to add twist to or remove twist from a twisted graphene nanoribbon (TGNR) without rotation is presented. The method consists of suspending a TGNR on two separate substrates and by changing only their distance, the total amount of twist of the TGNR is shown to change. The possibility to fine-tuning the amount of twist of a TGNR is also shown. The concept is demonstrated through fully atomistic molecular dynamics simulations and numerical calculations of the topological parameters twist and writhe of a TGNR. It is shown that the above process satisfies the so-called linking number theorem of space curves. Besides being experimentally feasible, this concept reveals a new kind of twist to writhe transition phenomenon that is tension-free and does not require controlling neither the nanoribbon end-to-end distance nor its critical twist density. read less NOT USED (high confidence) K. L. M. Elder, C. Achim, V. Heinonen, E. Granato, S. Ying, and T. Ala‐Nissila, “Modeling buckling and topological defects in stacked two-dimensional layers of graphene and hexagonal boron nitride,” Physical Review Materials. 2021. link Times cited: 7 Abstract: In this paper, a two-dimensional phase field crystal model o… read moreAbstract: In this paper, a two-dimensional phase field crystal model of graphene and hexagonal boron nitride (hBN) is extended to include out-of-plane deformations in stacked multilayer systems. As proof of principle, the model is shown analytically to reduce to standard models of flexible sheets in the small deformation limit. Applications to strained sheets, dislocation dipoles, and grain boundaries are used to validate the behavior of a single flexible graphene layer. For multilayer systems, parameters are obtained to match existing theoretical density functional theory calculations for graphene/graphene, hBN/hBN, and graphene/hBN bilayers. More precisely, it is shown that the parameters can be chosen to closely match the stacking energies and layer spacing calculated by Zhou et al. [Phys. Rev. B 92, 155438 (2015)]. Further validation of the model is presented in a study of rotated graphene bilayers and stacking boundaries. The flexibility of the model is illustrated by simulations that highlight the impact of complex microstructures in one layer on the other layer in a graphene/graphene bilayer. read less NOT USED (high confidence) T. Hakala, K. Holmberg, and A. Laukkanen, “Coupling Molecular Dynamics and Micromechanics for the Assessment of Friction and Damage Accumulation in Diamond-Like Carbon Thin Films under Lubricated Sliding Contacts,” Lubricants. 2021. link Times cited: 5 Abstract: Diamond-like carbon (DLC) coatings have proven to be an exce… read moreAbstract: Diamond-like carbon (DLC) coatings have proven to be an excellent thin film solution for reducing friction of tribological systems as well as providing resistance to wear. These characteristics yield greater efficiency and longer lifetimes of tribological contacts with respect to surface solutions targeting for example automotive applications. However, the route from discovery to deployment of DLC films has taken its time and still the design of these solutions is largely done on a trial-and-error basis. This results in challenges both in designing and optimizing DLC films for specific applications and limits the understanding, and subsequently exploitation, of many of the underlying physical mechanisms responsible for its favorable frictional response and high resistance to various types of wear. In current work multiscale modeling is utilized to study the friction and wear response of DLC thin films in dry and lubricated contacts. Atomic scale mechanisms responsible for friction due to interactions between the sliding surfaces and shearing of the amorphous carbon surface are utilized to establish frictional response for microstructure scale modeling of DLC to DLC surface contacts under dry and graphene lubricated conditions. Then at the coarser microstructural scale both structure of the multilayer, substrate and surface topography of the DLC coating are incorporated in studying of the behavior of the tribosystem. A fracture model is included to evaluate the nucleation and growth of wear damage leading either to loss of adhesion or failure of one of the film constituents. The results demonstrate the dependency of atomistic scale friction on film characteristics, particularly hybridization of bonding and tribochemistry. The microstructure scale modeling signifies the behavior of the film as a tribosystem, the various material properties and the surface topography interact to produce the explicitly modeled failure response. Ultimately, the work contributes towards establishing multiscale modeling capabilities to better understand and design novel DLC material solutions for various tribological applications. read less NOT USED (high confidence) Y. Xiang and G. Yamamoto, “A Data Mining Approach to Investigate the Carbon Nanotubes Mechanical Properties via High-Throughput Molecular Simulation,” Materials Science Forum. 2021. link Times cited: 5 Abstract: The relationship of geometrical properties and mechanical pr… read moreAbstract: The relationship of geometrical properties and mechanical properties of carbon nanotubes (CNTs) was investigated by using high-throughput molecular simulation. Geometrical properties such as diameter, number of walls, chirality, and crosslink density were considered. As a key factor in determining the mechanical properties of composites reinforced with CNTs, nominal tensile strength is the focus in this study, which can be calculated by fracture force divided by the full cross-sectional area including the hollow core and the wall thickness. The fracture mode, nominal tensile strength, and nominal Young’s modulus under the condition of CNTs outermost tube loading axial tensile test were evaluated. Three types of fracture modes led by different crosslink densities of CNTs were obtained. By data-mining through large amounts of datasets, we showed that CNTs with small diameter, large number of walls, and crosslinks between walls can have high nominal tensile strength. We demonstrated that zigzag-type CNTs with crosslink density of approximately 1.5% - 2.5%, armchair-type CNTs with crosslink density of approximately 3% - 4% can help improve the load transfer from the outer tube to the inner tube the most. read less NOT USED (high confidence) S. Sami, M. Sanati, and R. P. Joshi, “Simulations of hydrogen outgassing and sticking coefficients at a copper electrode surface: Dependencies on temperature, incident angle and energy,” Physical Review Research. 2021. link Times cited: 2 Abstract: The authors show simulations of adsorption and absorption at… read moreAbstract: The authors show simulations of adsorption and absorption at normal incidence as a function of energy in hydrogen outgassing. read less NOT USED (high confidence) Z. Xiong, L. Zhong, H. Wang, and X. Li, “Structural Defects, Mechanical Behaviors, and Properties of Two-Dimensional Materials,” Materials. 2021. link Times cited: 35 Abstract: Since the success of monolayer graphene exfoliation, two-dim… read moreAbstract: Since the success of monolayer graphene exfoliation, two-dimensional (2D) materials have been extensively studied due to their unique structures and unprecedented properties. Among these fascinating studies, the most predominant focus has been on their atomic structures, defects, and mechanical behaviors and properties, which serve as the basis for the practical applications of 2D materials. In this review, we first highlight the atomic structures of various 2D materials and the structural and energy features of some common defects. We then summarize the recent advances made in experimental, computational, and theoretical studies on the mechanical properties and behaviors of 2D materials. We mainly emphasized the underlying deformation and fracture mechanisms and the influences of various defects on mechanical behaviors and properties, which boost the emergence and development of topological design and defect engineering. We also further introduce the piezoelectric and flexoelectric behaviors of specific 2D materials to address the coupling between mechanical and electronic properties in 2D materials and the interactions between 2D crystals and substrates or between different 2D monolayers in heterostructures. Finally, we provide a perspective and outlook for future studies on the mechanical behaviors and properties of 2D materials. read less NOT USED (high confidence) C. Zhang, J. Zhou, C. Zhang, and X.-F. Chen, “Effects of Stone-Wales and vacancy defects in fracture behavior of defective graphene,” Journal of Physics: Conference Series. 2021. link Times cited: 3 Abstract: Graphene has much higher mechanical strength than other mate… read moreAbstract: Graphene has much higher mechanical strength than other materials, but can be significantly influenced by the vacancy defect or Stone-Wales defect in the lattices. In this paper, we use molecular dynamics simulation to study the effects of vacancy and Stone-Wales defects in fracture behavior of the defective graphene. The results show that the fracture strength of graphene is more sensitive to the vacancy defects than that of Stone-Wales defect. When the defect is located in the center of graphene, the fracture strength of defect graphene is less than that of defect-free graphene. When the defect is far away from the center of graphene, the fracture strength of defect graphene will be enhanced, even greater than that of defect-free graphene. This study may help to understand the properties of graphene with defect, but also show the potential for graphene-based materials in engineering. read less NOT USED (high confidence) Y. Mishin, “Machine-Learning Interatomic Potentials for Materials Science,” Electrical Engineering eJournal. 2021. link Times cited: 103 NOT USED (high confidence) B. Morrow and J. Harrison, “Evaluating the Ability of Selected Force Fields to Simulate Hydrocarbons as a Function of Temperature and Pressure Using Molecular Dynamics,” Energy & Fuels. 2021. link Times cited: 4 Abstract: The ability of both nonreactive (OPLS-AA) and reactive (AIRE… read moreAbstract: The ability of both nonreactive (OPLS-AA) and reactive (AIREBO-M and ReaxFF) force fields to model pure hydrocarbon fluids at various temperatures and pressures was assessed using molecular dynamic... read less NOT USED (high confidence) Y. Zhou, T. Yan, and W. Pan, “Study on the sorption mechanism of middle‐low temperature sorption thermal storage materials from the microscale simulation: A review,” International Journal of Energy Research. 2021. link Times cited: 2 Abstract: Middle‐low temperature sorption thermal storage materials (S… read moreAbstract: Middle‐low temperature sorption thermal storage materials (STSMs), which are widely applied in the waste heat utilization, can overcome the mismatch of thermal energy between supply and consumption. Many researchers have paid more attention to its complicated mechanism, particularly in the chemisorption process. Unlike the scientific experiment, microscale simulation has an immerse advantage of its low costs, high security, and high precision, which exploring the sorption mechanism at a molecular level. In this review, the microscale simulation method and its application in researching the sorption mechanism are summarized. We mainly stuck in three commonly microscale simulation methods: density functional theory, molecular dynamics, and Monte Carlo method. The diffusion, sorption isotherm and sorption heat, sorption dynamics, chemical reaction pathways, and structural stability are comprehensively examined, which illustrating how the interaction between adsorbate and adsorbent influences the properties of kinetics, thermodynamics, chemistry, and structure. Updating the algorithm, developing the multiscale simulation, establishing a database is promising to extend its application range of design the novel STSMs. Furthermore, as a smart bottom‐up method for designing materials, combing with experiment, theoretical calculation, and other burgeoning technology will shorten the time cycle from development to market. read less NOT USED (high confidence) J. Ewen, H. Spikes, and D. Dini, “Contributions of Molecular Dynamics Simulations to Elastohydrodynamic Lubrication,” Tribology Letters. 2021. link Times cited: 25 NOT USED (high confidence) S. Zhang, Q. Zhang, X. Liu, and S. Luo, “Tunable Poisson’s ratio and tension-compression asymmetry of graphene-copper nanolayered composites,” Journal of Physics D: Applied Physics. 2021. link Times cited: 2 Abstract: The Poisson’s ratios of graphene-copper nanolayered (GrCuNL)… read moreAbstract: The Poisson’s ratios of graphene-copper nanolayered (GrCuNL) composites under tension and compression are investigated by molecular dynamics and theoretical analysis. The Poisson’s ratio of a GrCuNL composite can be tuned by tailoring its repeat layer spacing without changing the topological structures. The effect of constituent nanocrystalline Cu grain size on the Poisson’s ratio is negligible. There are remarkable in-plane anisotropy and tension-compression asymmetry in the Poisson’s ratio due to the chiral difference in compressive stress in graphene layers. A mechanical model considering the chirality and repeat layer spacing is proposed, which can accurately predict the Poisson’s ratio of a GrCuNL composite. For stable GrCuNL composites, the repeat layer spacing should be larger than 2 nm, and their tunable range of Poisson’s ratio is 0.1–0.35. read less NOT USED (high confidence) Y.-C. Wang, Y. Zhu, and H. Wu, “Porous Characteristics of Three-Dimensional Disordered Graphene Networks,” Crystals. 2021. link Times cited: 8 Abstract: The porous characteristics of disordered carbons are critica… read moreAbstract: The porous characteristics of disordered carbons are critical factors to their performance on hydrogen storage and electrochemical capacitors. Even though the porous information can be estimated indirectly by gas adsorption experiments, it is still hard to directly characterize the porous morphology considering the complex 3D connectivity. To this end, we construct full-atom disordered graphene networks (DGNs) by mimicking the chlorination process of carbide-derived carbons using annealing-MD simulations, which could model the structure of disordered carbons at the atomic scale. The porous characteristics, including pore volume, pore size distribution (PSD), and specific surface area (SSA), were then computed from the coordinates of carbon atoms. From the evolution of structural features, pores grow dramatically during the formation of polyaromatic fragments and sequent disordered framework. Then structure is further graphitized while the PSD shows little change. For the obtained DGNs, the porosity, pore size, and SSA increase with decreasing density. Furthermore, SSA tends to saturate in the low-density range. The DGNs annealed at low temperatures exhibit larger SSA than high-temperature DGNs because of the abundant free edges. read less NOT USED (high confidence) A. Vasilev, T. Lorenz, and C. Breitkopf, “Thermal Conductivities of Crosslinked Polyisoprene and Polybutadiene from Molecular Dynamics Simulations,” Polymers. 2021. link Times cited: 6 Abstract: For the first time, the thermal conductivities of vulcanized… read moreAbstract: For the first time, the thermal conductivities of vulcanized polybutadiene and polyisoprene have been investigated according to their degree of crosslinking. The C-C and C-S-S-C crosslink bridges, which can be obtained via vulcanization processes using peroxides and sulfur, respectively, are considered. The temperature dependence of the thermal conductivity of soft rubber derived from molecular dynamics (MD) simulations is in very good agreement with the experimental results. The contributions of bonded and non-bonded interactions in the MD simulations and their influence on the thermal conductivities of polyisoprene and polybutadiene are presented. The details are discussed in this paper. read less NOT USED (high confidence) A. Carvalho, P. E. Trevisanutto, S. Taioli, and A. H. C. Neto, “Computational methods for 2D materials modelling,” Reports on Progress in Physics. 2021. link Times cited: 6 Abstract: Materials with thickness ranging from a few nanometers to a … read moreAbstract: Materials with thickness ranging from a few nanometers to a single atomic layer present unprecedented opportunities to investigate new phases of matter constrained to the two-dimensional plane. Particle–particle Coulomb interaction is dramatically affected and shaped by the dimensionality reduction, driving well-established solid state theoretical approaches to their limit of applicability. Methodological developments in theoretical modelling and computational algorithms, in close interaction with experiments, led to the discovery of the extraordinary properties of two-dimensional materials, such as high carrier mobility, Dirac cone dispersion and bright exciton luminescence, and inspired new device design paradigms. This review aims to describe the computational techniques used to simulate and predict the optical, electronic and mechanical properties of two-dimensional materials, and to interpret experimental observations. In particular, we discuss in detail the particular challenges arising in the simulation of two-dimensional constrained fermions and quasiparticles, and we offer our perspective on the future directions in this field. read less NOT USED (high confidence) S. Taheri and M. M. S. Fakhrabadi, “Molecular dynamics simulation of transversely isotropic elastic properties of carbon nanocones,” Physica Scripta. 2021. link Times cited: 4 Abstract: In this paper, transversely isotropic elastic properties of … read moreAbstract: In this paper, transversely isotropic elastic properties of carbon nanocones are studied using molecular dynamics simulation implemented in the large-scale atomic/molecular massively parallel simulator (LAMMPS). All atomic interactions are calculated based on the Adaptive Intermolecular Reactive Empirical Bond Order (AIREBO) potential energy functions. To determine the five independent elastic constants, four distinct loading conditions, i. e. uniaxial tensile, longitudinal torsion, in-plane biaxial stretching, and in-plane shear are imposed. The results reveal that Young’s and axial shear moduli are dependent on the apex angle of carbon nanocones, while the effect of the length on them is negligible. Furthermore, the in-plane bulk modulus and in-plane shear constant of these structures increase as their apex angle increases. read less NOT USED (high confidence) J. Shi, J. Zhang, J. Ji, and B. Song, “Tunable ductility of a nano-network from few-layered graphene bonded with benzene: a molecular dynamics study,” RSC Advances. 2021. link Times cited: 0 Abstract: Developing novel graphene-based materials with unique mechan… read moreAbstract: Developing novel graphene-based materials with unique mechanical properties is of significance to meet the requirements in new applications. The pristine graphene shows a brittle fracture when the stretching strain on it exceeds the critical value. Further, it fails to bear the external load. Herein, to enhance the ductility of the pristine graphene, we proposed a corrugated sandwich carbon network based on few-layered graphene, in which the two surface layers are bonded with several corrugated core layers via benzene molecules. The effects of factors such as the geometry, temperature, and strain rate on the ductility of the carbon network were evaluated using the uniaxial tension tests by molecular dynamics simulations. Results show that the new carbon material has more than one peak fracture strain in stretching. The second peak fracture strain is proportional to the length difference between the surface layers and core layers. Hence, the carbon network has a tunable ductility, which suggests a flexible design of such novel materials in a nanostructure/nanodevice with large deformation. read less NOT USED (high confidence) J. Douady, A. Simon, M. Rapacioli, F. Calvo, E. Yurtsever, and A. Tekin, “The structure of 1,3-butadiene clusters,” Theoretical Chemistry Accounts. 2020. link Times cited: 0 NOT USED (high confidence) H. Zou, Y. Feng, L. Qiu, and X. Zhang, “Effect of the loading amount and arrangement of iodine chains on the interfacial thermal transport of carbon nanotubes: a molecular dynamics study,” RSC Advances. 2020. link Times cited: 7 Abstract: Due to their excellent electrical and thermal conductivity p… read moreAbstract: Due to their excellent electrical and thermal conductivity properties, the nano-scale characteristics of carbon nanotubes (CNTs) are expected to be suitable for very large-scale integrated circuits and for next-generation micro interconnected devices. Consequently, CNT–metal composite materials have been widely researched, and have shown excellent performance in terms of thermal conductivity, electrical conductivity, thermal expansion, and adaptability to microelectronic devices. However, there are few studies on halogen–CNT composite materials with characteristics similar to CNT–metal composites, including regarding the remarkable electrical compatibility of the halogen and CNT and the large number of low-frequency phonons that are beneficial for thermal transport. In this work, iodine chains were considered to explore the halogen effect on CNTs. Variation of the interfacial thermal conductance of CNTs as a function of the iodine chains loading amount and arrangement was explored by a molecular dynamics method. The heat transfer mechanism was further analyzed based on the phonon state difference. This research is expected to provide a new pathway for the application of CNT composite materials in the field of next-generation microelectronics. read less NOT USED (high confidence) Y. Xiang, K. Shimoyama, K. Shirasu, and G. Yamamoto, “Machine Learning-Assisted High-Throughput Molecular Dynamics Simulation of High-Mechanical Performance Carbon Nanotube Structure,” Nanomaterials. 2020. link Times cited: 11 Abstract: Carbon nanotubes (CNTs) are novel materials with extraordina… read moreAbstract: Carbon nanotubes (CNTs) are novel materials with extraordinary mechanical properties. To gain insight on the design of high-mechanical-performance CNT-reinforced composites, the optimal structure of CNTs with high nominal tensile strength was determined in this study, where the nominal values correspond to the cross-sectional area of the entire specimen, including the hollow core. By using machine learning-assisted high-throughput molecular dynamics (HTMD) simulation, the relationship among the following structural parameters/properties was investigated: diameter, number of walls, chirality, and crosslink density. A database, comprising the various tensile test simulation results, was analyzed using a self-organizing map (SOM). It was observed that the influence of crosslink density on the nominal tensile strength tends to gradually decrease from the outside to the inside; generally, the crosslink density between the outermost wall and its adjacent wall is highly significant. In particular, based on our calculation conditions, five-walled, armchair-type CNTs with an outer diameter of 43.39 Å and crosslink densities (between the inner wall and outer wall) of 1.38 ± 1.16%, 1.13 ± 0.69%, 1.54 ± 0.57%, and 1.36 ± 0.35% were believed to be the optimal structure, with the nominal tensile strength and nominal Young’s modulus reaching approximately 58–64 GPa and 677–698 GPa. read less NOT USED (high confidence) O. Glukhova, M. Slepchenkov, and K. R. Asanov, “Carbon-Nanotube Nanomesh Films with X-Shaped Junctions for Electronic and Photovoltaic Applications,” Semiconductors. 2020. link Times cited: 0 NOT USED (high confidence) A. K. Sokolov, O. Garishin, and A. Svistkov, “Modeling of Structural Damage Evolution in Dispersion-Filled Elastomeric Nanocomposites with Regard for Interfacial Interaction,” Journal of Applied Mechanics and Technical Physics. 2020. link Times cited: 0 NOT USED (high confidence) J. Ehrens et al., “Theoretical formation of carbon nanomembranes under realistic conditions using classical molecular dynamics,” Physical Review B. 2020. link Times cited: 2 Abstract: Carbon nanomembranes made from aromatic precursor molecules … read moreAbstract: Carbon nanomembranes made from aromatic precursor molecules are free standing nanometer thin materials of macroscopic lateral dimensions. Although produced in various versions for about two decades not much is known about their internal structure. Here we present a first systematic theoretical attempt to model the formation, structure, and mechanical properties of carbon nanomembranes using classical molecular dynamics simulations. read less NOT USED (high confidence) M. Dinpajooh and A. Nitzan, “Heat conduction in polymer chains with controlled end-to-end distance.,” The Journal of chemical physics. 2020. link Times cited: 11 Abstract: The low thermal conductance of polymers is one of the major … read moreAbstract: The low thermal conductance of polymers is one of the major drawbacks for many polymer-based products. However, a single polymer chain when stretched can have high thermal conductivities. We use non-equilibrium molecular dynamics simulations to study the steady-state thermal conductance along finite macromolecules under mechanical control of the end-to-end distance. We find that the nature of heat transport along such chains strongly depends on mechanical tuning, leading to significantly different heat conductions and temperature profiles along the chain in the compressed-chain and stretched-chain limits. This transition between modes of behaviors appears to be a threshold phenomenon: at relatively small end-to-end distances, the thermal conductance remains almost constant as one stretches the polymer chain. At given critical end-to-end distances, thermal conductances start to increase, reaching the fully extended chain values. Correlated with this behavior are two observations: first, the temperature bias falls mostly at contacts in the fully stretched chain, while part of it falls along the molecule in the compressed limit. Second, the heat conduction does not change significantly with the chain length in the stretched-chain limit but decreases dramatically when this length increases in the compressed molecule. This suggests that heat transfer along stretched chains is mostly ballistic, while in the compressed chain, heat is transferred by diffusive mechanisms. Significantly, these trends persist also for a large range of molecular structures and force fields, and the changing behavior correlates well with mode localization properties. Similar studies conducted with disordered chains and bundles of several chains show remnants of the same behavior. read less NOT USED (high confidence) Z. Li, Y. Yan, J. Wang, and Y. Geng, “Molecular Dynamics Study on Tip-Based Nanomachining: A Review,” Nanoscale Research Letters. 2020. link Times cited: 8 NOT USED (high confidence) E. Aparicio et al., “Simulated mechanical properties of finite-size graphene nanoribbons,” Nanotechnology. 2020. link Times cited: 6 Abstract: There are many simulation studies of mechanical properties o… read moreAbstract: There are many simulation studies of mechanical properties of graphene nanoribbons (GNR), but there is a lack of agreement regarding elastic and plastic behavior. In this paper we aim to analyze mechanical properties of finite-size GNR, including elastic modulus and fracture, as a function of ribbon size. We present classical molecular dynamics simulations for three different empirical potentials which are often used for graphene simulations: AIREBO, REBO-scr and REAXFF. Ribbons with and without H-passivation at the borders are considered, and the effects of strain rate and different boundaries are also explored. We focus on zig-zag GNR, but also include some armchair GNR examples. Results are strongly dependent on the empirical potential employed. Elastic modulus under uniaxial tension can depend on ribbon size, unlike predictions from continuum-scale models and from some atomistic simulations, and fracture strain and progress vary significantly amongst the simulated potentials. Because of that, we have also carried out quasi-static ab-initio simulations for a selected size, and find that the fracture process is not sudden, instead the wave function changes from Blöch states to a strong interaction between localized waves, which decreases continuously with distance. All potentials show good agreement with DFT in the linear elastic regime, but only the REBO-scr potential shows reasonable agreement with DFT both in the nonlinear elastic and fracture regimes. This would allow more reliable simulations of GNRs and GNR-based nanostructures, to help interpreting experimental results and for future technological applications. read less NOT USED (high confidence) L. Bellucci, F. Delfino, and V. Tozzini, “In silico design, building and gas adsorption of nano-porous graphene scaffolds,” Nanotechnology. 2020. link Times cited: 3 Abstract: Graphene-based nano-porous materials (GNM) are potentially u… read moreAbstract: Graphene-based nano-porous materials (GNM) are potentially useful for all those applications needing a large specific surface area (SSA), typical of the bidimensional graphene, yet realized in the bulk dimensionality. Such applications include for instance gas storage and sorting, catalysis and electrochemical energy storage. While a reasonable control of the structure is achieved in micro-porous materials by using nano-micro particles as templates, the controlled production or even characterization of GNMs with porosity strictly at the nano-scale still raises issues. These are usually produced using dispersion of nano-flakes as precursors resulting in little control on the final structure, which in turn reflects in problems in the structural model building for computer simulations. In this work, we describe a strategy to build models for these materials with predetermined structural properties (SSA, density, porosity), which exploits molecular dynamics simulations, Monte Carlo methods and machine learning algorithms. Our strategy is inspired by the real synthesis process: starting from randomly distributed flakes, we include defects, perforation, structure deformation and edge saturation on the fly, and, after structural refinement, we obtain realistic models, with given structural features. We find relationships between the structural characteristics and size distributions of the starting flake suspension and the final structure, which can give indications for more efficient synthesis routes. We subsequently give a full characterization of the models versus H2 adsorption, from which we extract quantitative relationship between the structural parameters and the gravimetric density. Our results quantitatively clarify the role of surfaces and edges relative amount in determining the H2 adsorption, and suggest strategies to overcome the inherent physical limitations of these materials as adsorbers. We implemented the model building and analysis procedures in software tools, freely available upon request. read less NOT USED (high confidence) X. Wei, Z. Wang, Z. Tian, and T. Luo, “Thermal Transport in Polymers: A Review,” arXiv: Materials Science. 2020. link Times cited: 26 Abstract: In this article, we review thermal transport in polymers wit… read moreAbstract: In this article, we review thermal transport in polymers with different morphologies from aligned fibers to bulk amorphous states. We survey early and recent efforts in engineering polymers with high thermal conductivity by fabricating polymers with large-scale molecular alignments. The experimentally realized extremely high thermal conductivity of polymer nanofibers are highlighted, and understanding of thermal transport physics from molecular simulations are discussed. We then transition to the discussion of bulk amorphous polymers with an emphasize on the physics of thermal transport and its relation with the conformation of molecular chains in polymers. We also discuss the current understanding of how the chemistry of polymers would influence thermal transport in amorphous polymers and some limited, but important chemistry-structural-property relationships. Lastly, challenges, perspectives and outlook of this field are presented. We hope this review will inspire more fundamental and applied research in the polymer thermal transport field to advance scientific understanding and engineering applications. read less NOT USED (high confidence) G. P. P. Pun, V. Yamakov, J. Hickman, E. Glaessgen, and Y. Mishin, “Development of a general-purpose machine-learning interatomic potential for aluminum by the physically informed neural network method,” Physical Review Materials. 2020. link Times cited: 13 Abstract: Interatomic potentials constitute the key component of large… read moreAbstract: Interatomic potentials constitute the key component of large-scale atomistic simulations of materials. The recently proposed physically-informed neural network (PINN) method combines a high-dimensional regression implemented by an artificial neural network with a physics-based bond-order interatomic potential applicable to both metals and nonmetals. In this paper, we present a modified version of the PINN method that accelerates the potential training process and further improves the transferability of PINN potentials to unknown atomic environments. As an application, a modified PINN potential for Al has been developed by training on a large database of electronic structure calculations. The potential reproduces the reference first-principles energies within 2.6 meV per atom and accurately predicts a wide spectrum of physical properties of Al. Such properties include, but are not limited to, lattice dynamics, thermal expansion, energies of point and extended defects, the melting temperature, the structure and dynamic properties of liquid Al, the surface tensions of the liquid surface and the solid-liquid interface, and the nucleation and growth of a grain boundary crack. Computational efficiency of PINN potentials is also discussed. read less NOT USED (high confidence) M. Goel, S. Harsha, M. Mishra, and R. K. Mishra, “Effect of Geometrical Parameters and Hexa-Vacancy Defects on Vibration Characteristics of Bridged Carbon Nanotube,” Journal of Failure Analysis and Prevention. 2020. link Times cited: 0 NOT USED (high confidence) L. Pizzagalli, “Finite-temperature mechanical properties of nanostructures with first-principles accuracy,” Physical Review B. 2020. link Times cited: 6 Abstract: This article reports an original approach allowing to simula… read moreAbstract: This article reports an original approach allowing to simulate the compression at finite temperature of nanostructures, based on the combination of external forces with Car-Parrinello molecular dynamics. An example of a successful application is described, the compression of buckminster-fullerene C60 at room temperature. It is shown that the C60 shell breaks at much lower strains than previously predicted, with a maximum contact force of 30 nN. This simple example demonstrates the potential of this approach, which can be especially useful to determine the mechanical properties of nanoparticles and clusters with an outstanding accuracy. read less NOT USED (high confidence) H. Zhan, G. Zhang, X. Zhuang, R. Timon, and Y. T. Gu, “Low interfacial thermal resistance between crossed ultra-thin carbon nanothreads,” Carbon. 2020. link Times cited: 23 NOT USED (high confidence) M. Mohebali, N. Rezapour, P. Shadmani, and A. Montazeri, “An MD-based systematic study on the mechanical characteristics of a novel hybrid CNT/graphene drug carrier,” Journal of Molecular Modeling. 2020. link Times cited: 2 NOT USED (high confidence) Y. Hou et al., “Two-dimensional hybrid organic–inorganic perovskites as emergent ferroelectric materials,” Journal of Applied Physics. 2020. link Times cited: 21 Abstract: Hybrid organic–inorganic perovskite (HOIP) materials have at… read moreAbstract: Hybrid organic–inorganic perovskite (HOIP) materials have attracted significant attention in photovoltaics, light emission, photodetection, etc. Based on the prototype metal halide perovskite crystal, there is a huge space for tuning the composition and crystal structure of this material, which would provide great potential to render multiple physical properties beyond the ongoing emphasis on the optoelectronic property. Recently, the two-dimensional (2D) HOIPs have emerged as a potential candidate for a new class of ferroelectrics with high Curie temperature and spontaneous polarization. Room-temperature solution-processability further makes HOIP a promising alternative to traditional oxide ferroelectrics such as BaTiO3 and PbTiO3. In this perspective, we focus on the molecular aspects of 2D HOIPs, their correlation with macroscopic properties, as well as the material design rules assisted by advanced simulation tools (e.g., machine learning and atomistic modeling techniques). The perspective provides a comprehensive discussion on the structural origin of ferroelectricity, current progress in the design of new materials, and potential opportunities and challenges with emerging materials. We expect that this perspective will provide inspiration for innovation in 2D HOIP ferroelectrics. read less NOT USED (high confidence) B. Rice, W. Mattson, J. Larentzos, and E. Byrd, “Heuristics for chemical species identification in dense systems.,” The Journal of chemical physics. 2020. link Times cited: 6 Abstract: A new approach to identify chemical species from molecular d… read moreAbstract: A new approach to identify chemical species from molecular dynamics (MD) simulations of reacting materials under extreme temperatures and pressures is presented. The approach is based on bond-distance and vibrational criteria, derived from the examination of atomic behavior during a density functional theory MD simulation of an overdriven shock of the explosive pentaerythritol tetranitrate. For comparison, the trajectory was analyzed using popular bonding criteria commonly used in analysis of reactive MD simulations, including distance, distance-time, and bond-order criteria. Cluster analyses using the new time-dependent bond definition approach presented here and a bond-order approach revealed that species and their corresponding lifetimes were strongly dependent on the chosen approach, indicating significant implications for the development of chemical mechanisms and chemical kinetics models using the results of reactive MD simulations. read less NOT USED (high confidence) S. Ajori, S. H. Boroushak, and R. Ansari, “Fracture analysis and tensile properties of perfect and defective carbon nanotubes functionalized with carbene using molecular dynamics simulations,” Journal of the Brazilian Society of Mechanical Sciences and Engineering. 2020. link Times cited: 9 NOT USED (high confidence) L. Safina, J. Baimova, K. Krylova, R. Murzaev, and R. Mulyukov, “Simulation of metal-graphene composites by molecular dynamics: a review,” Letters on Materials. 2020. link Times cited: 20 Abstract: Fabrication of the new composite materials with improved mec… read moreAbstract: Fabrication of the new composite materials with improved mechanical characteristics is of high interest nowadays. Simulation methods can considerably improve understanding of the interaction between the graphene and metal phase, even in the atomistic level. In the present work, the simulation of graphene-metal composites by molecular dynamics is reviewed. Both experiments and simulation results have shown that the metal matrix can be reinforced with graphene flakes, and the overall mechanical properties of the final composite structure can be significantly improved. Two basic types of metal-graphene composite structures are considered: (i) metal matrix strengthens by graphene flakes and (ii) crumpled graphene (the porous structure that consists of crumpled graphene flakes connected by van der Waals forces) as the matrix for metal nanoparticles. Several different types of interatomic potentials like pairwise Lennard-Jones or Morse or complex bond order potentials for the description of metal-carbon interaction are presented and discussed. It is shown that even simple interatomic potentials can be effectively used for the molecular dynamics simulation of graphene-metal composites. Particular attention is paid to graphene-Ni composites obtained by deformation and heat treatment from crumpled graphene with pores filled with Ni nanoparticles. It is shown, that high-temperature compression can be effectively used for the fabrication of the graphene-Ni composite with improved mechanical properties. read less NOT USED (high confidence) O. Arroyo-Gascón, R. Fernández-Perea, E. S. Morell, C. Cabrillo, and L. Chico, “One-dimensional moiré superlattices and flat bands in collapsed chiral carbon nanotubes.,” Nano letters. 2020. link Times cited: 8 Abstract: We demonstrate that one-dimensional moiré patterns, analogou… read moreAbstract: We demonstrate that one-dimensional moiré patterns, analogous to those found in twisted bilayer graphene, can arise in collapsed chiral carbon nanotubes. Resorting to a combination of approaches, namely, molecular dynamics to obtain the relaxed geometries and tight-binding calculations validated against ab initio modeling, we find that magic angle physics occur in collapsed carbon nanotubes. Velocity reduction, flat bands and localization in AA regions with diminishing moiré angle are revealed, showing a magic angle close to 1º. From the spatial extension of the AA regions and the width of the flat bands, we estimate that many-body interactions in these systems are stronger than in twisted bilayer graphene. Chiral collapsed carbon nanotubes stand out as promising candidates to explore many-body effects and superconductivity in low dimensions, emerging as the one-dimensional analogues of twisted bilayer graphene. read less NOT USED (high confidence) M. Goel, S. Harsha, M. Mishra, and R. K. Mishra, “Influence of Various Defect Parameters on the Vibration Characteristics of a Single-Walled Carbon Nanotube,” Journal of Failure Analysis and Prevention. 2020. link Times cited: 1 NOT USED (high confidence) N. Sheremetyeva, M. Lamparski, C. Daniels, B. V. Troeye, and V. Meunier, “Machine-learning models for Raman spectra analysis of twisted bilayer graphene,” Carbon. 2020. link Times cited: 20 NOT USED (high confidence) N. Besley, “Vibrational Analysis of Carbon Nanotube-Based Nanomechanical Resonators,” The Journal of Physical Chemistry C. 2020. link Times cited: 4 Abstract: A vibrational analysis of three types of carbon nanotube-bas… read moreAbstract: A vibrational analysis of three types of carbon nanotube-based nanomechanical resonator is presented. Harmonic vibrational frequencies and the associated normal modes are evaluated through diagonal... read less NOT USED (high confidence) Y. Magnin et al., “Hydrocarbon Diffusion in Mesoporous Carbon Materials: Implications for Unconventional Gas Recovery,” ACS Applied Nano Materials. 2020. link Times cited: 7 Abstract: Methane diffusion in micro- and mesopores of carbonaceous ma… read moreAbstract: Methane diffusion in micro- and mesopores of carbonaceous materials is dominated by molecular interactions with the pore walls. As a consequence, the fluid molecules are mainly in a diffusive regim... read less NOT USED (high confidence) A. Jagusiak, K. Chlopas, G. Zemanek, P. Wolski, and T. Panczyk, “Controlled Release of Doxorubicin from the Drug Delivery Formulation Composed of Single-Walled Carbon Nanotubes and Congo Red: A Molecular Dynamics Study and Dynamic Light Scattering Analysis,” Pharmaceutics. 2020. link Times cited: 11 Abstract: The controlled delivery and release of drug molecules at spe… read moreAbstract: The controlled delivery and release of drug molecules at specific targets increases the therapeutic efficacy of treatment. This paper presents a triple complex which is a new potential drug delivery system. Triple complex contains single-walled carbon nanotubes, Congo red, and doxorubicin. Nanotubes are built of a folded graphene layer providing a large surface for binding Congo red via “face-to-face” stacking which markedly increases the binding capacity of the carrier. Congo red is a compound that self-associates to form supramolecular ribbon-like structures, which are able to bind some drugs by intercalation. The nanotube–Congo red complex can bind the model drug doxorubicin. Thus, a new triple carrier system was obtained. The aim of this paper is to present studies on the controlled release of a model anticancer drug from a triple carrier system through pH changes. The specific aim of the study was to model the structure of the obtained experimental systems and to compare the changes in the average energy of interaction between its components induced by pH changes. The studies also aimed to compare the intensity of pH-dependent changes in hydrodynamic diameters of individual components of the triple carrier system. The effect of pH changes on the stability of the analyzed systems was examined using the molecular modeling method and dynamic light scattering. The decrease in pH influenced the structure and stability of the analyzed triple systems and ensured efficient drug release. The changes in hydrodynamic diameters of the obtained fractions were examined with the use of dynamic light scattering and were confirmed by computer simulation methods. The formulation presented in this paper shows potential for a therapeutic application owing to its high drug binding capacity and pH-dependent release. This ensures prolonged local action of the drug. The results reveal that the studied complex fulfills the basic requirements for its potential use as drug carrier, thus reducing side effects and enhancing pharmacological efficacy of drugs. read less NOT USED (high confidence) P. Rowe, V. L. Deringer, P. Gasparotto, G. Csányi, and A. Michaelides, “An accurate and transferable machine learning potential for carbon.,” The Journal of chemical physics. 2020. link Times cited: 120 Abstract: We present an accurate machine learning (ML) model for atomi… read moreAbstract: We present an accurate machine learning (ML) model for atomistic simulations of carbon, constructed using the Gaussian approximation potential (GAP) methodology. The potential, named GAP-20, describes the properties of the bulk crystalline and amorphous phases, crystal surfaces, and defect structures with an accuracy approaching that of direct ab initio simulation, but at a significantly reduced cost. We combine structural databases for amorphous carbon and graphene, which we extend substantially by adding suitable configurations, for example, for defects in graphene and other nanostructures. The final potential is fitted to reference data computed using the optB88-vdW density functional theory (DFT) functional. Dispersion interactions, which are crucial to describe multilayer carbonaceous materials, are therefore implicitly included. We additionally account for long-range dispersion interactions using a semianalytical two-body term and show that an improved model can be obtained through an optimization of the many-body smooth overlap of atomic positions descriptor. We rigorously test the potential on lattice parameters, bond lengths, formation energies, and phonon dispersions of numerous carbon allotropes. We compare the formation energies of an extensive set of defect structures, surfaces, and surface reconstructions to DFT reference calculations. The present work demonstrates the ability to combine, in the same ML model, the previously attained flexibility required for amorphous carbon [V. L. Deringer and G. Csányi, Phys. Rev. B 95, 094203 (2017)] with the high numerical accuracy necessary for crystalline graphene [Rowe et al., Phys. Rev. B 97, 054303 (2018)], thereby providing an interatomic potential that will be applicable to a wide range of applications concerning diverse forms of bulk and nanostructured carbon. read less NOT USED (high confidence) A. Delcorte et al., “Large cluster ions: soft local probes and tools for organic and bio surfaces.,” Physical chemistry chemical physics : PCCP. 2020. link Times cited: 13 Abstract: Ionised cluster beams have been produced and employed for th… read moreAbstract: Ionised cluster beams have been produced and employed for thin film deposition and surface processing for half a century. In the last two decades, kiloelectronvolt cluster ions have also proved to be outstanding for surface characterisation by secondary ion mass spectrometry (SIMS), because their sputter and ion yields are enhanced in a non-linear fashion with respect to monoatomic projectiles, with a resulting step change of sensitivity for analysis and imaging. In particular, large gas cluster ion beams, or GCIB, have now become a reference in organic surface and thin film analysis using SIMS and X-ray photoelectron spectroscopy (XPS). The reason is that they induce soft molecular desorption and offer the opportunity to conduct damageless depth-profiling and 3D molecular imaging of the most sensitive organic electronics and biological samples, with a nanoscale depth resolution. In line with these recent developments, the present review focuses on rather weakly-bound, light-element cluster ions, such as noble or other gas clusters, and water or alcohol nanodroplets (excluding clusters made of metals, inorganic salts or ionic liquids) and their interaction with surfaces (essentially, but not exclusively, organic). The scope of this article encompasses three aspects. The first one is the fundamentals of large cluster impacts with surfaces, using the wealth of information provided by molecular dynamics simulations and experimental observations. The second focus is on recent applications of large cluster ion beams in surface characterisation, including mass spectrometric analysis and 2D localisation of large molecules, molecular depth-profiling and 3D molecular imaging. Finally, the perspective explores cutting edge developments, involving (i) new types of clusters with a chemistry designed to enhance performance for mass spectrometry imaging, (ii) the use of cluster fragment ion backscattering to locally retrieve physical surface properties and (iii) the fabrication of new biosurface and thin film architectures, where large cluster ion beams are used as tools to transfer biomolecules in vacuo from a target reservoir to any collector substrate. read less NOT USED (high confidence) S. Alosious, S. Alosious, S. Kannam, S. P. Sathian, and B. D. Todd, “Kapitza resistance at water-graphene interfaces.,” The Journal of chemical physics. 2020. link Times cited: 15 Abstract: Heat transfer across fluid-solid interfaces in nanoconfineme… read moreAbstract: Heat transfer across fluid-solid interfaces in nanoconfinement has received significant attention due to its relevance in nanoscale systems. In this study, we investigate the Kapitza resistance at the water-graphene interface with the help of classical molecular dynamics simulation techniques in conjunction with our recently proposed equilibrium molecular dynamics (EMD) method [S. Alosious et al., J. Chem. Phys. 151, 194502 (2019)]. The size effect of the Kapitza resistance on different factors such as the number of graphene layers, the cross-sectional area, and the width of the water block was studied. The Kapitza resistance decreases slightly with an increase in the number of layers, while the influence of the cross-sectional area and the width of the water block is negligible. The variation in the Kapitza resistance as a function of the number of graphene layers is attributed to the large phonon mean free path along the graphene cross-plane. An optimum water-graphene system, which is independent of size effects, was selected, and the same was used to determine the Kapitza resistance using the predicted EMD method. The values obtained from both the EMD and the non-equilibrium molecular dynamics (NEMD) methods were compared for different potentials and water models, and the results are shown to be in good agreement. Our method allows us to compute the Kapitza resistance using EMD simulations, which obviates the need to create a large temperature gradient required for the NEMD method. read less NOT USED (high confidence) A. Islam, M. S. Islam, N. Ferdous, J. Park, and A. Hashimoto, “Vacancy-induced thermal transport in two-dimensional silicon carbide: a reverse non-equilibrium molecular dynamics study.,” Physical chemistry chemical physics : PCCP. 2020. link Times cited: 23 Abstract: Because of its impressive electrical, thermal, and mechanica… read moreAbstract: Because of its impressive electrical, thermal, and mechanical properties, two-dimensional silicon carbide (2D-SiC) has recently gained tremendous attention in the field of nanoelectronics and optoelectronics. Here, we investigated the effects of various types of defects such as bi-, point-, and mixed-vacancies on the thermal conductivity of 2D-SiC using reverse non-equilibrium molecular dynamics simulation. The effects of temperature variation on the thermal conductivity of vacancy-defected 2D-SiC were also studied. A significant reduction of the thermal conductivity was observed when the concentrations of the vacancies were increased. The point vacancy resulted in the thermal conductivity decreasing more quickly as compared to bi vacancy and mixed vacancy defects. Moreover, increasing the temperature of vacancy-defected 2D-SiC further reduced the thermal conductivity due to a strong phonon-vacancy scattering effect. Because of the introduction of vacancy defects in the acoustic phonon density of states (PDOS), a softening behavior in the intensity of the characteristic peaks is perceived, and with increasing temperature, a frequency shrinking is noted in the PDOS curves, both of which contribute to the reduction of the thermal conductivity. Additionally, rapid softening of the phonon transmission spectrum and increase in entropy were obtained for the point vacancy-defected structure, which clearly confirms our findings at different vacancy concentrations as well as for types of vacancies. These findings are very much imperative for realizing heat dissipation in nano- and optoelectronic devices based on 2D-SiC as well as for demonstrating an effective method for modulating 2D-SiC thermal conductivity through defect engineering. read less NOT USED (high confidence) V. Sirotkin, “Molecular Dynamics Study of the Interaction of Accelerated Argon Atoms with a Pyrolytic Carbon Surface,” Bulletin of the Russian Academy of Sciences: Physics. 2020. link Times cited: 1 NOT USED (high confidence) M. Goel, S. Harsha, M. Mishra, and R. K. Mishra, “Buckling Failure Analysis of Defective Carbon Nanotubes Using Molecular Dynamics Simulation,” Journal of Failure Analysis and Prevention. 2020. link Times cited: 9 NOT USED (high confidence) E. Ghavaminezhad, M. Mahnama, and N. Zolfaghari, “The effects of van der Waals interactions on the vibrational behavior of single-walled carbon nanotubes using the hammer impact test: a molecular dynamics study.,” Physical chemistry chemical physics : PCCP. 2020. link Times cited: 4 Abstract: The hammer impact test is a conventional modal analysis tech… read moreAbstract: The hammer impact test is a conventional modal analysis technique in large-scale structures. It possesses efficient capability in the excitation of any structure within a wide range of frequencies and thus, this technique can be a good method to identify the dynamics of any structure. Here, we have implemented this method on nano-scale structures using molecular dynamics simulations. For convenience, we used a carbon nanotube (CNT) that showed complicated behavior due to van der Waals (vdW) interactions with a graphene sheet. The graphene sheet represents the vdW interactions of the CNT with its surroundings, which is an important distinction between the phenomena at the nano-scale. The variations in the fundamental natural frequency and quality factor of the CNT with different strengths of the vdW interactions are explored. For this purpose, the distance between the CNT and graphene is used as the tuning parameter. The results of the hammer impact tests were compared and matched to those obtained with a well-established method in the nano-scale that involved thermomechanical noise. Having the natural frequencies of CNT and graphene sheet at their isolated state, it can be noted that the vdW effects bring both the structures into a common intermediary natural frequency when they are close enough. Increasing the distance between CNT and graphene, after passing a certain limit, the structures tend to have their natural frequencies in their isolated states. Up to this certain limit, the fundamental frequency of the graphene sheet is completely equal to that of the CNT. This shows a full coupling of the two structures at closer distances, which transforms into decoupling at higher distances. The frequencies corresponding to the two structures deviate in a way that the CNT vibrates faster than the graphene sheet. At far enough distances, the natural frequencies meet the values of the isolated states of the structures. As an aside, the quality factor of the CNT shows an inverse relation with the fundamental frequencies. These results can be used in the design of novel experimental procedures for the evaluation of the vibrational properties of nanostructures. read less NOT USED (high confidence) N. Dasgupta, Y. Shin, M. Fedkin, and A. V. van Duin, “ReaxFF molecular dynamics simulations of electrolyte-water systems at supercritical temperature.,” The Journal of chemical physics. 2020. link Times cited: 8 Abstract: We have performed ReaxFF molecular dynamics simulations of a… read moreAbstract: We have performed ReaxFF molecular dynamics simulations of alkali metal-chlorine pairs in different water densities at supercritical temperature (700 K) to elucidate the structural and dynamical properties of the system. The radial distribution function and the angular distribution function explain the inter-ionic structural and orientational arrangements of atoms during the simulation. The coordination number of water molecules in the solvation shell of ions increases with an increase in the radius of ions. We find that the self-diffusion coefficient of metal ions increases with a decrease in density under supercritical conditions due to the formation of voids within the system. The hydrogen bond dynamics has been interpreted by the residence time distribution of various ions, which shows Li+ having the highest water retaining capability. The void distribution within the system has been analyzed by using the Voronoi polyhedra algorithm providing an estimation of void formation within the system at high temperatures. We observe the formation of salt clusters of Na+ and K+ at low densities due to the loss of dielectric constants of ions. The diffusion of ions gets altered dramatically due to the formation of voids and nucleation of ions in the system. read less NOT USED (high confidence) J. Gołębiowski, J. Kermode, P. Haynes, and A. Mostofi, “Atomistic QM/MM simulations of the strength of covalent interfaces in carbon nanotube-polymer composites.,” Physical chemistry chemical physics : PCCP. 2020. link Times cited: 0 Abstract: We investigate the failure of carbon-nanotube/polymer compos… read moreAbstract: We investigate the failure of carbon-nanotube/polymer composites by using a recently-developed hybrid quantum-mechanical/molecular-mechanical (QM/MM) approach to simulate nanotube pull-out from a cross-linked polyethene matrix. Our study focuses on the strength and failure modes of covalently-bonded nanotube-polymer interfaces based on amine, carbene and carboxyl functional groups and a [2+1] cycloaddition. We find that the choice of the functional group linking the polymer matrix to the nanotube determines the effective strength of the interface, which can be increased by up to 50% (up to the limit dictated by the strength of the polymer backbone itself) by choosing groups with higher interfacial binding energy. We rank the functional groups presented in this work based on the strength of the resulting interface and suggest broad guidelines for the rational design of nanotube functionalisation for nanotube-polymer composites. read less NOT USED (high confidence) C. Qi, W. Peng, J. Zhou, L. Yi, J. Wang, and Y. Zhang, “From graphene to graphene ribbons: atomically precise cutting via hydrogenation pseudo-crack,” Nanotechnology. 2020. link Times cited: 1 Abstract: The properties and applications of graphene nanoribbons (GNR… read moreAbstract: The properties and applications of graphene nanoribbons (GNRs) depend heavily on their shape and size, making precise design and construction at atomic scale significantly important. Herein, we show that pseudo-cracking is a feasible method for creating atomically precise GNRs. By using molecular dynamics (MD) simulation, we find that hydrogenation can act as a pseudo-crack to trigger the fracture of graphene along the hydrogenation line and cut the graphene into a GNR. Precise GNRs with a desired width, edge type and associated properties can be realized in a controllable way by manipulating the position and dimension of the hydrogenation pseudo-crack. We also find that it is better to use hydrogenation pseudo-cracks along the armchair direction to cut graphene at lower forces into GNRs with smooth edges. Our findings suggest a promising approach to cut graphene and other two-dimensional materials into nanoribbons effectively and accurately. read less NOT USED (high confidence) S. Ajori, H. Parsapour, R. Ansari, and S. Haghighi, “Effect of metallic nanowire encapsulation on the tensile behavior of single-walled carbon nanotubes: a molecular dynamics study,” The European Physical Journal D. 2020. link Times cited: 3 NOT USED (high confidence) P. Wolski, K. Nieszporek, and T. Panczyk, “Carbon Nanotubes and Short Cytosine-Rich Telomeric DNA Oligomeres as Platforms for Controlled Release of Doxorubicin—A Molecular Dynamics Study,” International Journal of Molecular Sciences. 2020. link Times cited: 14 Abstract: This work deals with molecular dynamics analysis of properti… read moreAbstract: This work deals with molecular dynamics analysis of properties of systems composed of carbon nanotubes and short telomeric DNA strands able to fold into i-motif structures at slightly acidic pH conditions. The studies are focused on possible application of such constructs as pH-controlled drug delivery and release systems. We study two different approaches. The first assumes that folding/unfolding property of these DNA strands might realize a gate closing/opening mechanism with carbon nanotube as a container for drug molecules. The second approach assumes that these DNA strands can modulate the drug intercalating property as a function of pH. As a model drug molecule we used doxorubicin. We found that the first approach is impossible to realize because doxorubicin is not effectively locked in the nanotube interior by DNA oligonuceotides. The second approach is more promising though direct drug release was not observed in unbiased molecular dynamics simulations. However, by applying detailed analysis of pair interaction energies, mobilities and potential of mean force we can show that doxorubicin can be released when the DNA strands fold into i-motifs. Carbon nanotube in that latter case acts mainly as a carrier for active phase which is composed of DNA fragments able to fold into noncanonical tetraplexes (i-motif). read less NOT USED (high confidence) V. K and S. P. Sathian, “The effect of temperature on water desalination through two-dimensional nanopores.,” The Journal of chemical physics. 2020. link Times cited: 6 Abstract: Two-dimensional (2D) materials such as graphene, molybdenum … read moreAbstract: Two-dimensional (2D) materials such as graphene, molybdenum sulfide, and hexagonal boron nitride are widely studied for separation applications such as water desalination. Desalination across such 2D nanoporous membranes is largely influenced by the bulk transport properties of water, which are, in turn, sensitive to the operating temperature. However, there have been no studies on the effect of temperature on desalination through 2D nanopores. We investigated water desalination through hydrogen functionalized graphene nanopores of varying pore areas at temperatures 275.0 K, 300.0 K, 325.0 K, and 350.0 K. The water flux showed a direct relation with the diffusion coefficient and an inverse relation with the hydrogen-bond lifetime. As a direct consequence, the water flux was found to be related to the temperature as per the Arrhenius equation, similar to an activated process. The results from the present study improve the understanding on water and ion permeation across nanoporous 2D materials at different temperatures. Furthermore, the present investigation suggests a kinetic model, which can predict the water and ion permeation based on the characteristics of the nanopore. read less NOT USED (high confidence) K. Seo and D.-E. Kim, “Molecular dynamics investigation on the nano-mechanical behaviour of C60 fullerene and its crystallized structure.,” Nanoscale. 2020. link Times cited: 8 Abstract: C60 fullerene has been utilized in various applications, inc… read moreAbstract: C60 fullerene has been utilized in various applications, including low friction and wear coatings, due to its unique molecular structure. In this work, molecular dynamics simulations were conducted to assess the nano-mechanical behaviour of a single C60 fullerene and its crystallized structure. A single C60 model and a model of a face-centred cubic structured C60 crystal with a one-unit-cell thickness were prepared for compression and unloading simulations based on the adaptive intermolecular reactive empirical bond-order potential for carbon. Force-displacement curves and molecule-averaged virial stresses were obtained during the simulation. The models applied during the compression and unloading processes were visualized to confirm the deformation behaviour. Both the single and crystal C60 models showed a perfectly reversible deformation before the point of force decrease that occurred during compression. In particular, the face-centred cubic structure of the crystal C60 model was severely altered during compression before the individual C60 molecules experienced permanent deformation. The maximum values of the normal virial stress in the compression direction before the permanent deformation of the molecules were almost same for both the single and crystallized models. read less NOT USED (high confidence) S. Nasiri et al., “Multilayer Structures of Graphene and Pt Nanoparticles: A Multiscale Computational Study,” Advanced Engineering Materials. 2020. link Times cited: 5 Abstract: Multiscale simulation study results of multilayer structures… read moreAbstract: Multiscale simulation study results of multilayer structures consisting of graphene sheets with embedded Pt nanoparticles is reported. Density functional theory is used to understand the energetics of Pt–graphene interfaces and provide reference data for the parameterization of a Pt–graphene interaction potential. Molecular dynamics simulations then provide the conformation and energetics of graphene sheets with embedded Pt nanoparticles of varying density, form, and size. These results are interpreted using a continuum mechanical model of sheet deformation, and serve to parameterize a meso‐scale Monte Carlo model to investigate the question under which conditions the free volume around the Pt nanoparticles forms a percolating cluster, such that the structures can be used in catalytic applications. This article is concluded with a discussion of potential applications of such multilayer structures. read less NOT USED (high confidence) Q. Yang, W. A. Nanney, X. Hu, T. Ye, and A. Martini, “Nanoscale Friction of Hydrophilic and Hydrophobic Self-Assembled Monolayers in Water,” Tribology Letters. 2020. link Times cited: 3 NOT USED (high confidence) H. Zhan, G. Zhang, J. Bell, V. Tan, and Y. T. Gu, “High density mechanical energy storage with carbon nanothread bundle,” Nature Communications. 2020. link Times cited: 47 NOT USED (high confidence) T. Hao and Z. Hossain, “Stress-localization induced toughening in CNT–silica nanocomposites,” Journal of Applied Physics. 2020. link Times cited: 1 Abstract: Applying a combination of atomistic and continuum scale simu… read moreAbstract: Applying a combination of atomistic and continuum scale simulations, we show that stress-localization forms the fundamental basis for toughening in “carbon nanotube reinforced amorphous silica” ( CNT − aSiO 2). Depending on the cohesive strength of the interface, a propagating crack renders three distinct types of failure conditions: (i) with stronger cohesive interactions both silica and nanotube undergo catastrophic failure, (ii) with moderate cohesive interactions the nanotube debonds from the matrix and undergoes severe mechanical deformation but fracture remains in the matrix, and (iii) with lower cohesive strengths the nanotube debonds from the matrix easily and allows quicker failure of the matrix, compared to the previous two failure conditions. For either of the cases, continued propagation of the crack requires renucleation at the opposite side of the nanotube. However, the renucleation criteria are mostly unaffected by the strength of interfacial interactions. Also, the effective toughness of the nanocomposite increases nonlinearly with increasing interfacial strength and the maximum possible toughness enhancement is strictly controlled by the strength of elastic interactions between the nanotube and the matrix. The overall toughening behavior of the nanocomposite is governed primarily by stress-localization at the nanotube–silica intersections along the projected crack path direction in the composite. The observations highlight the dramatic role of site-selective interatomic interactions that can affect the macroscopic mechanical behavior of the nanocomposite substantially. read less NOT USED (high confidence) B. Song, J. Shi, J. Wang, J. Shen, and K. Cai, “Ideal Oscillation of a Hydrogenated Deformable Rotor in a Gigahertz Rotation–Translation Nanoconverter at Low Temperatures,” Sensors (Basel, Switzerland). 2020. link Times cited: 1 Abstract: It was discovered that large-amplitude axial oscillation can… read moreAbstract: It was discovered that large-amplitude axial oscillation can occur on a rotor with an internally hydrogenated deformable part (HDP) in a rotation–translation nanoconverter. The dynamic outputs of the system were investigated using molecular dynamics simulations. When an input rotational frequency (100 GHz > ω > 20 GHz) was applied at one end of the rotor, the HDP deformed under the centrifugal and van der Waals forces, which simultaneously led to the axial translation of the other end of the rotor. Except at too high an input rotational frequency (e.g., >100 GHz), which led to eccentric rotation and even collapse of the system, the present system could generate a periodic axial oscillation with an amplitude above 0.5 nm at a temperature below 50 K. In other ranges of temperature and amplitude, the oscillation dampened quickly due to the drastic thermal vibrations of the atoms. Furthermore, the effects of the hydrogenation scheme and the length of HDP on the equilibrium position, amplitude, and frequency of oscillation were investigated. The conclusions can be applied to the design of an ideal nano-oscillator based on the present rotation–translation converter model. read less NOT USED (high confidence) A. Martini, S. Eder, and N. Dörr, “Tribochemistry: A Review of Reactive Molecular Dynamics Simulations,” Lubricants. 2020. link Times cited: 40 Abstract: Tribochemistry, the study of chemical reactions in tribologi… read moreAbstract: Tribochemistry, the study of chemical reactions in tribological interfaces, plays a critical role in determining friction and wear behavior. One method researchers have used to explore tribochemistry is “reactive” molecular dynamics simulation based on empirical models that capture the formation and breaking of chemical bonds. This review summarizes studies that have been performed using reactive molecular dynamics simulations of chemical reactions in sliding contacts. Topics include shear-driven reactions between and within solid surfaces, between solid surfaces and lubricating fluids, and within lubricating fluids. The review concludes with a perspective on the contributions of reactive molecular dynamics simulations to the current understanding of tribochemistry, as well as opportunities for this approach going forward. read less NOT USED (high confidence) K. Momeni et al., “Multiscale computational understanding and growth of 2D materials: a review,” npj Computational Materials. 2020. link Times cited: 85 NOT USED (high confidence) G. Chen, J. Chen, and Z.-liang Wang, “Thermal Transport at Interface Between Single-Layer Graphene and Water Film,” International Journal of Thermophysics. 2020. link Times cited: 2 NOT USED (high confidence) M. Wen and E. Tadmor, “Uncertainty quantification in molecular simulations with dropout neural network potentials,” npj Computational Materials. 2020. link Times cited: 46 NOT USED (high confidence) B. Sharma and A. Parashar, “A review on thermo-mechanical properties of bi-crystalline and polycrystalline 2D nanomaterials,” Critical Reviews in Solid State and Materials Sciences. 2020. link Times cited: 29 Abstract: Due to outstanding properties, graphene and h-BN nanosheets … read moreAbstract: Due to outstanding properties, graphene and h-BN nanosheets are emerging as a potential candidate for wide spectrum of applications in the field of engineering and bio-medical science. Graphene and h-BN nanosheets have comparable mechanical and thermal properties, whereas due to high band gap h-BN (∼5eV) have contrasting electrical conductivities. Large size graphene and h-BN nanosheets are synthesized by chemical vapor deposition technique, which results in polycrystalline atomic structure. These polycrystalline nanosheets are characterized either by experimental means or numerical simulations. Experimental techniques are considered as most accurate and practical, but cost and time involved in these techniques limits it application at the nanoscale level. On the other hand, atomistic modeling techniques are emerging as viable alternatives to the experimentations, and are accurate enough to predict the mechanical properties, fracture toughness, and thermal conductivities of polycrystalline graphene and h-BN nanosheets. This comprehensive review article encompasses different characterizing techniques used by the researchers for polycrystalline nanosheets. This review will help in elaborating the properties of polycrystalline graphene and h-BN, and also establishing a perspective on how the microstructure impacts its large-scale physical properties. read less NOT USED (high confidence) T. Panczyk, P. Wojtoń, and P. Wolski, “Molecular Dynamics Study of the Interaction of Carbon Nanotubes with Telomeric DNA Fragment Containing Noncanonical G-Quadruplex and i-Motif Forms,” International Journal of Molecular Sciences. 2020. link Times cited: 10 Abstract: This work deals with molecular dynamics simulations of syste… read moreAbstract: This work deals with molecular dynamics simulations of systems composed of telomeric dsDNA fragments, iG, and functionalized carbon nanotubes, fCNT. The iG contains 90 nucleotides in total and in its middle part the noncanonical i-motif and G-quadruplex are formed. Two chiralities of the fCNT were used, i.e., (10,0) and (20,0) and these nanotubes were either on-tip functionalized by guanine containing functional groups or left without functionalization. We proposed a dedicated computational procedure, based on the replica exchange concept, for finding a thermodynamically optimal conformation of iG and fCNT without destroying the very fragile noncanonical parts of the iG. We found that iG forms a V-shape spatial structure with the noncanonical fragments located at the edge and the remaining dsDNA strands forming the arms of V letter. The optimal configuration of iG in reference to fCNT strongly depends on the on-tip functionalization of the fCNT. The carbon nanotube without functionalization moves freely between the dsDNA arms, while the presence of guanine residues leads to immobilization of the fCNT and preferential location of the nanotube tip near the junction between the dsDNA duplex and i-motif and G-quadruplex. We also studied how the presence of fCNT affects the stability of the i-motif at the neutral pH when the cytosine pairs are nonprotonated. We concluded that carbon nanotubes do not improve the stability of the spatial structure of i-motif also when it is a part of a bigger structure like the iG. Such an effect was described in literature in reference to carboxylated nanotubes. Our current results suggest that the stabilization of i-motif is most probably related to easy formation of semiprotonated cytosine pairs at neutral pH due to interaction with carboxylated carbon nanotubes. read less NOT USED (high confidence) L. L. Safina and J. Baimova, “Molecular dynamics simulation of fabrication of Ni‐graphene composite: temperature effect,” Micro & Nano Letters. 2020. link Times cited: 17 Abstract: Fabrication of Ni-graphene composite by hydrostatic pressure… read moreAbstract: Fabrication of Ni-graphene composite by hydrostatic pressure at finite temperatures or by the subsequent annealing is studied by molecular dynamics simulation. Crumpled graphene – the network of folded and crumpled graphene flakes connected by van-der-Waals bonds – is chosen as the matrix for Ni nanoclusters. It is found that hydrostatic compression at zero or room temperature cannot lead to the formation of the composite structure. Even strongly compressed crumpled graphene after unloading returned to the initial state of separated graphene flakes. However, annealing of the compressed structure at high temperature leads to the appearance of the valent bonds between neighbouring flakes. Simultaneously, hydrostatic compression at high temperature between 1000 and 2000 K leads to the better mixing of Ni atoms inside the structure and to the formation of strong covalent bonds between neighbouring flakes. read less NOT USED (high confidence) J. Lin, S. Wang, H. Liu, K. Yin, L. Wu, and W. Li, “The Effect of Ion Irradiation Density on the Defect of Graphene: A Molecular Dynamics Study,” Crystals. 2020. link Times cited: 2 Abstract: This paper analyzes graphene irradiation effects using a mol… read moreAbstract: This paper analyzes graphene irradiation effects using a molecular dynamic simulation software, large-scale atomic / molecular massively parallel simulator (LAMMPS). We propose a hypothesis for the effective range of incident ions based on simulation results of irradiation effects that were found using a suspended single-layer graphene. This explains the influence mechanism of irradiation density on the degree of material defects. This paper does key research on how copper substrate influences a single- and bi-layer graphene. The results show that for a single-layer graphene (SLG) the substrate increases the effective range of the incident ions. Within a certain range of the irradiation density, the substrate enhances the defect production on graphene in low-energy irradiation (<5 keV). However, due to the shielding effect of the substrate, the overall trend of graphene damage will be reduced. For the bi-layer graphene (BLG), the effect of the indirect action range is more obvious than that of the direct-action range. In the case of low irradiation density, the knock-on atoms of BLG are much less than suspended SLG. read less NOT USED (high confidence) S. Pal, P. N. Babu, B. Gargeya, and C. Becquart, “Molecular Dynamics simulation based investigation of possible enhancement in strength and ductility of nanocrystalline aluminum by CNT reinforcement,” Materials Chemistry and Physics. 2020. link Times cited: 22 NOT USED (high confidence) A. Kolesnikova and K. Prihodchenko, “Modification of the molecular-mechanics method for realizing the interaction of carbon structures with potassium atoms,” BiOS. 2020. link Times cited: 0 Abstract: The theoretical molecular-mechanical method using the AIREBO… read moreAbstract: The theoretical molecular-mechanical method using the AIREBO energy potential was modernized to study the mechanical properties of porous carbon nanostructures doped with potassium atoms. The selection of coefficients was carried out by solving a minimax problem based on experimental data of the distances between the potassium and carbon atoms. The choice of this particular method for modifying and studying the mechanical properties of nanostructures is due to the necessity of calculating a large number of atoms with minimal time expenditures and with no loss of calculation accuracy. The study of mechanical properties was carried out depending on the size of the nanopores of the porous carbon nanostructure. The modernization consisted in the selection of weighting coefficients to describe the interaction between potassium and carbon atoms. Physical interaction is described by the Lennard-Jones potential. This modernization was performed to study the mechanical properties of carbon nanostructures of doped potassium atoms. read less NOT USED (high confidence) X. Zhou et al., “Role of black carbon in the formation of primary organic aerosols: Insights from molecular dynamics simulations,” Atmospheric Chemistry and Physics. 2020. link Times cited: 0 Abstract: Abstract. Many studies on the mixing state of suspended part… read moreAbstract: Abstract. Many studies on the mixing state of suspended particulate matters (PM) have pointed to the role of carbon particles as nucleation seeds in the formation of atmospheric aerosols. However, the underlying physicochemical mechanisms remain unclear, particularly concerning the involvement of volatile organic compounds (VOCs) at the primary stage of clustering. Here we gain insights into those microscopic formation mechanisms through molecular dynamics simulations of the physisorption of gaseous organic molecules on the surface of a carbon nanoparticle (NP). Six different organic species are selected among the VOCs dominating the atmospheric pollutants of several megacities, to interact with an onion-shell NP that mimics the primary soot particle. We consider organic molecules at various densities on the surface of a NP, as well as the same molecules in a freestanding configuration without any NP. The molecular clusters formed on the NP are found to be energetically more stable than those formed in the gas phase for all the six organic compounds. This points to a catalytic role of black carbon in the primary formation of aerosols from VOCs. Morphology analysis reveals different manners of clustering of aromatic and aliphatic compounds, which lead to different values of the binding energy and thus different thermal stability. Simulation results also suggest a layer-by-layer formation process of aerosol PM, consistent with previous transmission electron microscopy observations. These results shed light on the microscopic mechanisms of the primary formation of aerosol particulate matters, and are correlated with a variety of experimental measurements. read less NOT USED (high confidence) L. A. Belyaeva, L. Jiang, A. Soleimani, J. Methorst, H. Risselada, and G. Schneider, “Liquids relax and unify strain in graphene,” Nature Communications. 2020. link Times cited: 16 NOT USED (high confidence) Y. Li, J.-W. Jiang, W. Zhu, and T. Chang, “Buckling of cylindrical shells subjected to a finite number of lateral loads: application to single-walled carbon nanotubes,” Nanotechnology. 2020. link Times cited: 2 Abstract: The continuous loading assumption is adopted in most present… read moreAbstract: The continuous loading assumption is adopted in most present studies on the buckling of thin shells subjected to lateral loads, while the relationship between the finite number of loads and the lateral buckling remains unclear. In this work, we derive an analytic formula for the dependence of the critical buckling stress on the number of loads, which shows that the critical stress increases significantly with the increase of the load number and reaches a saturation value in the limit of large load number. Furthermore, the analytic formula reveals the dependence of the critical stress on the deviation of the radius in an imperfect shell. To verify the validity of the analytic formula, we perform molecular dynamics simulations to investigate the buckling of both perfect and imperfect single-walled carbon nanotubes under a finite number of lateral loads, where the analytic formula agrees with the simulation results. These results shall be valuable for understanding mechanical stability of elastic thin shells or nanoscale tubal structures subjected to discrete lateral loads. read less NOT USED (high confidence) Y. D. Fomin and V. Brazhkin, “Comparative study of melting of graphite and graphene,” Carbon. 2020. link Times cited: 31 NOT USED (high confidence) P. Clabaut, P. Fleurat‐Lessard, C. Michel, and S. Steinmann, “Ten Facets, One Force Field: The GAL19 Force Field for Water - Noble Metal Interfaces.,” Journal of chemical theory and computation. 2020. link Times cited: 23 Abstract: Understanding the structure of the water/metal interfaces pl… read moreAbstract: Understanding the structure of the water/metal interfaces plays an important role in many areas ranging from surface chemistry to environmental processes. The size, required phase-space sampling and the slow diffusion of molecules at the water/metal interfaces motivate the development of accurate force-fields. We develop and parametrize GAL19, a novel force-field to describe the interaction of water with two facets (111 and 100) of five metals (Pt, Pd, Au, Ag, Cu). To increase transferability compared to its predecessor GAL17, the water-metal interaction is described as a sum of pair-wise terms. The interaction energy has three contributions: (i) physisorption is described via a Tang and Toennies potential, (ii) chemisorption and surface corrugation relies on an attractive Gaussian term and (iii) the angular dependence is explicitly included as a truncated Fourier series. 13 parameters are used for each metal surface and were fitted on 250 water adsorption energies computed at the PBE+dDsC level. The performance of GAL19 was evaluated on a set of more than 600 DFT adsorption energies for each surface, leading to an average root mean square deviation (RMSD) of only 1 kcal/mol, correctly reproducing the adsorption trends: strong on Pt and Pd but weaker on Ag, Au and Cu. This force-field was then used to simulate the water/metal interface for all ten surfaces for 1 ns. Structural analyses reveal similar tendencies for all surfaces: a first, dense water layer that is mostly adsorbed on the metal top sites, and a second layer up to around 6 Å, which is less structured. On Pt and Pd, the first layer is strongly organized with water lying flat on the surface. The pairwise additive functional form allows to simulate the water adsorption on alloys, which is demonstrated at the example of Ag/Cu and Au/Pt alloys. The water/Ag-Cu interface is predicted to be disordered with water mostly adsorbed on Cu which should exacerbate the Ag reactivity. On the contrary, incorporating Pt into Au materials leads to a structuring of the water interface. Our promising results make GAL19 an ideal candidate to get representative sampling of complex metal/water interfaces as a first step towards accurate estimation of free energies of reactions in solution at the metal interface. read less NOT USED (high confidence) Z. Wang, “Chirality-Selective Transport of Benzene Molecules on Carbon Nanotubes,” Journal of Physical Chemistry C. 2020. link Times cited: 7 Abstract: Using molecular dynamics simulations, we predict an effect o… read moreAbstract: Using molecular dynamics simulations, we predict an effect of chirality on the conduction of benzene molecules along the surface of carbon nanotubes (CNTs) subjected to a thermal gradient. The grou... read less NOT USED (high confidence) K. Lin, D. Li, S. Song, Z. Ye, W. Jiang, and Q. Qin, “Enhanced mechanical properties of 4H-SiC by epitaxial carbon films obtained from bilayer graphene,” Nanotechnology. 2020. link Times cited: 11 Abstract: Graphene exhibits excellent mechanical properties under atom… read moreAbstract: Graphene exhibits excellent mechanical properties under atomically thin thickness, which made it very suitable for nanoelectromechanical systems that had high requirements for the thickness of coatings. The epitaxial bilayer graphene on the 4H-SiC (0001) surface presents high stiffness and hardness comparable to diamond. However, due to structural transition occurring at the nanoscale, it is difficult to elucidate reinforcement mechanisms using experimental methods. Here, we applied molecular dynamics simulations to study nanoindentation of epitaxial carbon-film-covered 4H-SiC (0001) surfaces. Because a weak interaction potential existed between graphene layers at indentation depth (h < 0.8 Å) that far smaller than interlayer distance, the epitaxial bilayer graphene does not allow the 4H-SiC to exceed its intrinsic stiffness. When the indentation depth h ≥6.45 Å, the sp3 hybridized bonds formed on the interlayer of graphene, which leads to fewer amorphous atoms in the sample of 4H-SiC and exhibits stronger stiffness, in comparison with bare 4H-SiC. This strongly suggests the existence of sp3 bonds contributing to the surface strengthening. Meanwhile, we found that the comprehensive mechanical properties of nanocomposites with hydrogenated diamond-like films were superior to those of nanocomposites with other carbon films at high temperatures. read less NOT USED (high confidence) Z. Wang, F. Yang, J. Shang, N. Wei, L. Kou, and C. Li, “Mechanical properties of CNT-reinforced Ni3Al composites: the role of chirality, temperature, and volume fraction,” Journal of Physics: Condensed Matter. 2020. link Times cited: 5 Abstract: is an extremely significant reinforcing phase in nickel-base… read moreAbstract: is an extremely significant reinforcing phase in nickel-based single crystal superalloys. As an alternative strengthening method to improve its mechanical properties, carbon nanotube (CNT)-reinforced composites have recently been synthesized in experiments. Here, in order to explore the corresponding influence factors and the underlying mechanism, tensile and compressive mechanical properties of CNT- composites are systematically investigated by using molecular dynamics simulations. It is shown that the dispersion of a minor fraction of a CNT into matrix leads to a sufficient enhancement in the stiffness of CNT- composites compared with the pure . It is demonstrated that CNT reinforcement takes effect in the elastic stage under compression while it works continuously during tension. Compared with armchair CNTs, zigzag CNTs are predicted to provide more strength for raising the elastic modulus while armchair CNTs can provide superior elongation. Particularly, CNTs are found to hinder the generation of slip bands under tensile loading owing to the robust interfacial interactions. Furthermore, quantitative analysis reveals that the impact of volume fraction of CNT is much more significant than the size effect. The role of chirality, temperature and volume fraction of CNT obtained in the present work could provide beneficial references for subsequent theoretical and experimental investigations, and shed some light on the design of CNT-reinforced composites in nanoscale engineering. read less NOT USED (high confidence) L. Bellucci and V. Tozzini, “Engineering 3D Graphene-Based Materials: State of the Art and Perspectives,” Molecules. 2020. link Times cited: 14 Abstract: Graphene is the prototype of two-dimensional (2D) materials,… read moreAbstract: Graphene is the prototype of two-dimensional (2D) materials, whose main feature is the extremely large surface-to-mass ratio. This property is interesting for a series of applications that involve interactions between particles and surfaces, such as, for instance, gas, fluid or charge storage, catalysis, and filtering. However, for most of these, a volumetric extension is needed, while preserving the large exposed surface. This proved to be rather a hard task, especially when specific structural features are also required (e.g., porosity or density given). Here we review the recent experimental realizations and theoretical/simulation studies of 3D materials based on graphene. Two main synthesis routes area available, both of which currently use (reduced) graphene oxide flakes as precursors. The first involves mixing and interlacing the flakes through various treatments (suspension, dehydration, reduction, activation, and others), leading to disordered nanoporous materials whose structure can be characterized a posteriori, but is difficult to control. With the aim of achieving a better control, a second path involves the functionalization of the flakes with pillars molecules, bringing a new class of materials with structure partially controlled by the size, shape, and chemical-physical properties of the pillars. We finally outline the first steps on a possible third road, which involves the construction of pillared multi-layers using epitaxial regularly nano-patterned graphene as precursor. While presenting a number of further difficulties, in principle this strategy would allow a complete control on the structural characteristics of the final 3D architecture. read less NOT USED (high confidence) C. Toh et al., “Synthesis and properties of free-standing monolayer amorphous carbon,” Nature. 2020. link Times cited: 200 NOT USED (high confidence) A. Kolesnikova, M. Rozhkov, and A. Romanov, “On Fracture of Pseudo-Graphenes,” Mechanics of Solids. 2020. link Times cited: 1 NOT USED (high confidence) A. Kolesnikova, M. Rozhkov, and A. Romanov, “On Fracture of Pseudo-Graphenes,” Mechanics of Solids. 2020. link Times cited: 0 NOT USED (high confidence) S. Gravelle, C. Kamal, and L. Botto, “Liquid exfoliation of multilayer graphene in sheared solvents: A molecular dynamics investigation.,” The Journal of chemical physics. 2019. link Times cited: 15 Abstract: Liquid-phase exfoliation, the use of a sheared liquid to del… read moreAbstract: Liquid-phase exfoliation, the use of a sheared liquid to delaminate graphite into few-layer graphene, is a promising technique for the large-scale production of graphene. However, the microscale and nanoscale fluid-structure processes controlling the exfoliation are not fully understood. Here, we perform non-equilibrium molecular dynamics simulations of a defect-free graphite nanoplatelet suspended in a shear flow and measure the critical shear rate γ̇c needed for the exfoliation to occur. We compare γ̇c for different solvents, including water and N-methyl-pyrrolidone, and nanoplatelets of different lengths. Using a theoretical model based on a balance between the work done by viscous shearing forces and the change in interfacial energies upon layer sliding, we are able to predict the critical shear rates γ̇c measured in simulations. We find that an accurate prediction of the exfoliation of short graphite nanoplatelets is possible only if both hydrodynamic slip and the fluid forces on the graphene edges are considered and if an accurate value of the solid-liquid surface energy is used. The commonly used "geometric-mean" approximation for the solid-liquid energy leads to grossly incorrect predictions. read less NOT USED (high confidence) K. Mercan, “Comparative Stability Analysis of Silicone Carbide Nanotube using MD Simulation and FEM Software,” International Journal of Engineering and Applied Sciences. 2019. link Times cited: 2 Abstract: In this paper, the stability analysis of silicon carbide nan… read moreAbstract: In this paper, the stability analysis of silicon carbide nanotube (SiCNT) has been investigated. Nanotubes has many advantages with its very high surface area, exceptional electrical conductivity and resistance to high temperature and external loads. Although nanotubes can be obtained without superfluous effort, it is not facile to achieve experimental analyzes due to demand of laboratory equipment with astronomical cost. To obtain critical buckling loads, both molecular dynamic (MD) method and ANSYS finite element software is used in current paper. LAMMPS (Large-scale Atomic/Molecular Massively Parallel Simulator) is used for calculating critical buckling load. Also, VMD (visual molecular dynamics) is used to visualize atoms in molecular dynamic analysis. read less NOT USED (high confidence) L. Safina, J. Baimova, and R. Mulyukov, “Nickel nanoparticles inside carbon nanostructures: atomistic simulation,” Mechanics of Advanced Materials and Modern Processes. 2019. link Times cited: 17 NOT USED (high confidence) W. Zheng, C. Sun, B. Wen, B. Bai, and E. Lichtfouse, “Effects of Molecular Chain Length on the Contact Line Movement in Water/n-Alkane/Solid Systems,” Polymers. 2019. link Times cited: 0 Abstract: The movement of the contact line in liquid-liquid-solid syst… read moreAbstract: The movement of the contact line in liquid-liquid-solid systems is a major phenomenon in natural and industrial processes. In particular, n-alkanes are widely occurring in the oil, soil pollution, and chemical industries, yet there is little knowledge on the effects of molecular chain length on the contact line movement. Here, we studied the effects of molecular chain length on the contact line movement in water/n-alkane/solid systems with different surface wettabilities. We used n-heptane (C7), n-decane (C10), and n-hexadecane (C16) as alkanes and α-quartz as the solid surface. We calculated the time-variation contact line moving velocity and also analyzed the jump frequency and the mean distance of the molecular displacement occurring within the contact line zone by molecular-kinetic theory. Molecular dynamics simulation results show that the contact line velocity decreases with increasing the chain length, originally caused by the decreasing the jump frequency and mean distance. These variations with the molecular chain length are related to the more torsions and deformations of the molecules with a longer chain length. In addition, the moving mechanism of the contact line on the same solid surface does not change at different molecular chain lengths, implying that the moving mechanism mainly depends on the three-phase wettability. read less NOT USED (high confidence) S. Signetti, K. Kang, N. Pugno, and S. Ryu, “Atomistic modelling of the hypervelocity dynamics of shock-compressed graphite and impacted graphene armours,” Computational Materials Science. 2019. link Times cited: 5 NOT USED (high confidence) P. Wang, Q. Cao, H. Wang, Y. Nie, S. Liu, and Q. Peng, “Fivefold enhancement of yield and toughness of copper nanowires via coating carbon nanotubes,” Nanotechnology. 2019. link Times cited: 5 Abstract: Carbon nanotubes are outstanding reinforcements owing to the… read moreAbstract: Carbon nanotubes are outstanding reinforcements owing to their unparallel strength, while their effects on the copper nanowire are still not fully understood, hampering their broad applications. Herein, we have investigated the tensile behaviors of the nanocomposite-wire of carbon nanotube-copper using molecular dynamic simulations. For the nanocomposite, both the coated and embedded carbon nanotubes increase the Young’s modulus, fracture stress and toughness of the copper nanowire. A reinforcement of over fivefold in both yield strength (5.3 times) and toughness (5.1 times) has been achieved when the carbon nanotubes are coated on the copper nanowires, as well as 1.7 times in the Young’s modulus. Higher temperatures and lower loading rates reduce the reinforcement. read less NOT USED (high confidence) L. Yang et al., “Molecular dynamics simulation on the formation and development of interlayer dislocations in bilayer graphene,” Nanotechnology. 2019. link Times cited: 5 Abstract: Molecular dynamics simulations are used to study the formati… read moreAbstract: Molecular dynamics simulations are used to study the formation and development of interlayer dislocations in bilayer graphene (BLG) subjected to uniaxial tension. Two different BLGs are employed for the simulation: armchair (AC-BLG) and zigzag (ZZ-BLG). The atomic-level strains are calculated and the parameter ‘dislocation intensity’ is introduced to identify the dislocations. The interlayer dislocation is found to start at the edge and propagate to the center. For AC-BLG, the dislocations arise successively with the increase of applied strain, and all dislocations have the same width. For ZZ-BLG, the first dislocation arises alone. After that, two dislocations with different widths appear together every time. The simulated dislocation widths are in good agreement with existing experimental results. Across every dislocation, there is a transition from AB stacking to AC stacking, or vice versa. When temperature is taken into account, the dislocation boundaries become indistinct and the formation of dislocations is postponed due to the existence of dispersive small slippages. Due to the disturbance of temperature, dislocations present reciprocating movement. These findings contribute to the understanding of interlayer dislocations in two-dimensional materials, and will enable the exploration of many more strain related fundamental science problems and application challenges. read less NOT USED (high confidence) J. Hur, “Modified potential for atomistic simulation of the growth of carbon materials from binary alloy catalysts.,” Physical chemistry chemical physics : PCCP. 2019. link Times cited: 3 Abstract: A new hybrid bond order potential has been developed and imp… read moreAbstract: A new hybrid bond order potential has been developed and implemented to describe carbon-bimetallic alloy interactions, which are involved in the catalytic growth of carbon materials such as graphene and carbon nanotubes on the surface of binary alloy catalysts. In carefully adjusting the parameters, the potential energy fitting correlated with the results calculated from the density functional theory (DFT) method leads to a high quality empirical force field with an average error of <4.5% only. With the PES accuracy, in total 16 (n,m) have been successfully obtained from the MD trajectories in this work, and the structural evolution including random chirality and diameter formation has been identified. The newly modified force field is expected to be useful for modelling the spontaneous growth of carbon materials, particularly tubes on binary alloy clusters, giving an idea of how these C-C, C-M, and M-M interactions affect the growth behavior of carbon nanotubes. In addition, the new FF is only valid for liquid alloy nanoparticles at this time, but the use of solid alloy nanocatalysts with the new FF can be further employed for 2-D material growth such as graphene layer growth. read less NOT USED (high confidence) T. Shi, Q. Peng, Z. Bai, F. Gao, and I. Jovanovic, “Proton irradiation of graphene: insights from atomistic modeling.,” Nanoscale. 2019. link Times cited: 15 Abstract: Various types of topological defects are produced during pro… read moreAbstract: Various types of topological defects are produced during proton irradiation, which are crucial in functionalizing graphene, but the mechanisms of the defect generation process and the structure change are still elusive. Herein, we investigated the graphene defect generation probabilities and defect structures under proton irradiation using both ab initio and classical molecular dynamics simulations. As the proton energy increases from 0.1 keV to 100 keV, defect structures transition from single vacancy and Frenkel pairs to a rich variety of topological defects with the possibility of ejecting multiple atoms. We show that, relatively good agreement on defect generation probabilities can be reached between the two simulation approaches at a proton energy of 1 and 10 keV. However, at 0.1 keV, the single vacancy generation probability differs significantly in two methods due to the difference in the energy required to form single vacancy. Using the classical molecular dynamics simulation, we also studied the evolution of different types of defects and the dependence of their probabilities of occurrence on the proton energy and incident angle. The correlation between the impact positions and defect types allows for the convoluted relationship between the defect probabilities, geometric parameters, and proton energy to be elucidated. We show that the proton energy and incident angle can be used to effectively tune the generation probabilities of different types of defects. Our results provide insights into the controlled defect engineering through ion irradiation, which will be useful for the development of functionalized graphene and graphene electronics. read less NOT USED (high confidence) A. Galashev, K. Ivanichkina, K. Katin, and M. Maslov, “Computational Study of Lithium Intercalation in Silicene Channels on a Carbon Substrate after Nuclear Transmutation Doping,” Comput. 2019. link Times cited: 10 Abstract: Silicene is considered to be the most promising anode materi… read moreAbstract: Silicene is considered to be the most promising anode material for lithium-ion batteries. In this work, we show that transmutation doping makes silicene substantially more suitable for use as an anode material. Pristine and modified bilayer silicene was simulated on a graphite substrate using the classical molecular dynamics method. The parameters of Morse potentials for alloying elements were determined using quantum mechanical calculations. The main advantage of modified silicene is its low deformability during lithium intercalation and its possibility of obtaining a significantly higher battery charge capacity. Horizontal and vertical profiles of the density of lithium as well as distributions of the most significant stresses in the walls of the channels were calculated both in undoped and doped systems with different gaps in silicene channels. The energies of lithium adsorption on silicene, including phosphorus-doped silicene, were determined. High values of the self-diffusion coefficient of lithium atoms in the silicene channels were obtained, which ensured a high cycling rate. The calculations showed that such doping increased the normal stress on the walls of the channel filled with lithium to 67% but did not provoke a loss of mechanical strength. In addition, doping achieved a greater battery capacity and higher charging/discharging rates. read less NOT USED (high confidence) J. Zhang, “Mechanical deformations of carbon nanorings: a study by molecular dynamics and nonlocal continuum mechanics,” Meccanica. 2019. link Times cited: 3 NOT USED (high confidence) S. Ajori, S. Haghighi, and R. Ansari, “Tensile characteristics of carbene-functionalized CNTs subjected to physisorption of polymer chains: a molecular dynamics study,” Journal of Molecular Modeling. 2019. link Times cited: 10 NOT USED (high confidence) F. Mehralian, R. Firouz-Abadi, and A. V. Moshtagh, “Elastic properties of vertically aligned carbon nanotubes: A molecular dynamics study,” The European Physical Journal Plus. 2019. link Times cited: 4 NOT USED (high confidence) L. Pascazio, J. W. Martin, M. L. Botero, M. Sirignano, A. D’Anna, and M. Kraft, “Mechanical Properties of Soot Particles: The Impact of Crosslinked Polycyclic Aromatic Hydrocarbons,” Combustion Science and Technology. 2019. link Times cited: 15 Abstract: ABSTRACT In this paper, we estimate the degree of crosslinki… read moreAbstract: ABSTRACT In this paper, we estimate the degree of crosslinking within soot particles making use of reactive molecular dynamics simulations of mechanical properties of crosslinked polycyclic aromatic hydrocarbons (PAH). Representative systems of PAH (pyrene, coronene, ovalene and circumpyrene) with a density similar to soot and with varying degrees of crosslinking were built. Uniaxial tensile test simulations were carried out on the systems and the yield stress of each sample was calculated. The hardness was estimated from the yield stress using an empirical conversion constant and the obtained values were compared with nanoindentation experiments of soot particles. The results show that mature ethylene and diesel soot particles are expected to present a degree of crosslinking between 2.1–3.0 and 3.0–3.5, respectively, to have a value comparable to the hardness found experimentally. Finally, an MD simulation of nanoindentation of a particle of crosslinked coronene molecules provided an alternative means to compute the empirical constant used to convert the yield stress in hardness. These results reveal the importance of crosslinking reactions during soot maturation that give rise to a structure in which the majority of aromatics are aliphatically linked in a 3D network. read less NOT USED (high confidence) Z. Wang, “Chirality-dependent motion transmission between aligned carbon nanotubes,” Carbon. 2019. link Times cited: 14 NOT USED (high confidence) M. Wen and E. Tadmor, “Hybrid neural network potential for multilayer graphene,” Physical Review B. 2019. link Times cited: 40 Abstract: Monolayer and multilayer graphene are promising materials fo… read moreAbstract: Monolayer and multilayer graphene are promising materials for applications such as electronic devices, sensors, energy generation and storage, and medicine. In order to perform large-scale atomistic simulations of the mechanical and thermal behavior of graphene-based devices, accurate interatomic potentials are required. Here, we present a new interatomic potential for multilayer graphene structures referred to as "hNN--Gr$_x$." This hybrid potential employs a neural network to describe short-range interactions and a theoretically-motivated analytical term to model long-range dispersion. The potential is trained against a large dataset of monolayer graphene, bilayer graphene, and graphite configurations obtained from ab initio total-energy calculations based on density functional theory (DFT). The potential provides accurate energy and forces for both intralayer and interlayer interactions, correctly reproducing DFT results for structural, energetic, and elastic properties such as the equilibrium layer spacing, interlayer binding energy, elastic moduli, and phonon dispersions to which it was not fit. The potential is used to study the effect of vacancies on thermal conductivity in monolayer graphene and interlayer friction in bilayer graphene. The potential is available through the OpenKIM interatomic potential repository at \url{this https URL}. read less NOT USED (high confidence) X. Han, F. Xu, S. Duan, H. Zhan, Y. T. Gu, and G.-rong Liu, “A novel super-elastic carbon nanofiber with cup-stacked carbon nanocones and a screw dislocation,” Carbon. 2019. link Times cited: 13 NOT USED (high confidence) Y. Liang and S. Huan, “Research on Strain Rate Effect of the Mechanical Properties of Graphene Sheet Containing Randomly Distributed Defects,” Iranian Journal of Science and Technology, Transactions of Civil Engineering. 2019. link Times cited: 1 NOT USED (high confidence) Y. Xia, Y. Li, C. Zhu, N. Wei, and J. Zhao, “Improvements of mechanical properties of multilayer open-hole graphene papers,” Journal of Applied Physics. 2019. link Times cited: 6 Abstract: Holes and defects can greatly reduce the mechanical properti… read moreAbstract: Holes and defects can greatly reduce the mechanical properties of multilayer graphene sheets under different loading conditions due to the stress concentration near the hole edge in each in-plane sheet and the lack of interlayer carbon–carbon bonds between the layers. Here, we report a novel design of multilayer open-hole graphene papers (MLGPs) formed through interlayer covalent bonding at the hole edges of multilayer open-hole graphene sheets (MLGSs) under high temperature using molecular dynamics (MD) simulations. Our MD results show that the hybrid sp2–sp3 interlayer bonds of MLGPs can significantly improve their both tensile strength and interlayer shear strength. The tensile strength and interlayer shear strength of MLGPs increase by around 20% and 3 times by comparison with those of MLGSs with the same number of layers, respectively, which mainly depends on the uniformity of their interlayer bond distribution. This study can provide an effective way to improve the mechanical performances of multilayer graphene sheets with flaws and also offer corresponding guidance for the design of MLGS-based nanocomposites.Holes and defects can greatly reduce the mechanical properties of multilayer graphene sheets under different loading conditions due to the stress concentration near the hole edge in each in-plane sheet and the lack of interlayer carbon–carbon bonds between the layers. Here, we report a novel design of multilayer open-hole graphene papers (MLGPs) formed through interlayer covalent bonding at the hole edges of multilayer open-hole graphene sheets (MLGSs) under high temperature using molecular dynamics (MD) simulations. Our MD results show that the hybrid sp2–sp3 interlayer bonds of MLGPs can significantly improve their both tensile strength and interlayer shear strength. The tensile strength and interlayer shear strength of MLGPs increase by around 20% and 3 times by comparison with those of MLGSs with the same number of layers, respectively, which mainly depends on the uniformity of their interlayer bond distribution. This study can provide an effective way to improve the mechanical performances of multila... read less NOT USED (high confidence) J. Acharjee and R. P. Joshi, “Numerical evaluation of hydrogen outgassing from copper electrodes with mitigation based on a tungsten capping layer,” Physics of Plasmas. 2019. link Times cited: 6 Abstract: Outgassing remains a pertinent issue for high power applicat… read moreAbstract: Outgassing remains a pertinent issue for high power applications and is exacerbated by the high field driven, localized heating environments commonly encountered. Here, molecular dynamics simulations are performed for a simple model-based assessment of outgassing from electrodes. Our results of temperature dependent diffusion coefficients for hydrogen in copper agree well with experimental reports over a wide range spanning 300 K to 1330 K. Separate results are also obtained for transport of hydrogen to ascertain whether a grain-boundary would facilitate channeled transport or work to impede flow by clustering the gas atoms. Finally, the use of a tungsten overlayer on copper is evaluated as a material-based strategy for mitigating outgassing. It is demonstrated that a few monolayers of tungsten coating on the outer surface can be effective in significantly reducing outdiffusion at 700 K.Outgassing remains a pertinent issue for high power applications and is exacerbated by the high field driven, localized heating environments commonly encountered. Here, molecular dynamics simulations are performed for a simple model-based assessment of outgassing from electrodes. Our results of temperature dependent diffusion coefficients for hydrogen in copper agree well with experimental reports over a wide range spanning 300 K to 1330 K. Separate results are also obtained for transport of hydrogen to ascertain whether a grain-boundary would facilitate channeled transport or work to impede flow by clustering the gas atoms. Finally, the use of a tungsten overlayer on copper is evaluated as a material-based strategy for mitigating outgassing. It is demonstrated that a few monolayers of tungsten coating on the outer surface can be effective in significantly reducing outdiffusion at 700 K. read less NOT USED (high confidence) S. S. R. Koloor, S. M. Rahimian-Koloor, A. Karimzadeh, M. Hamdi, M. Petrů, and M. Tamin, “Nano-Level Damage Characterization of Graphene/Polymer Cohesive Interface under Tensile Separation,” Polymers. 2019. link Times cited: 23 Abstract: The mechanical behavior of graphene/polymer interfaces in th… read moreAbstract: The mechanical behavior of graphene/polymer interfaces in the graphene-reinforced epoxy nanocomposite is one of the factors that dictates the deformation and damage response of the nanocomposites. In this study, hybrid molecular dynamic (MD) and finite element (FE) simulations of a graphene/polymer nanocomposite are developed to characterize the elastic-damage behavior of graphene/polymer interfaces under a tensile separation condition. The MD results show that the graphene/epoxy interface behaves in the form of elastic-softening exponential regressive law. The FE results verify the adequacy of the cohesive zone model in accurate prediction of the interface damage behavior. The graphene/epoxy cohesive interface is characterized by normal stiffness, tensile strength, and fracture energy of 5 × 10−8 (aPa·nm−1), 9.75 × 10−10 (nm), 2.1 × 10−10 (N·nm−1) respectively, that is followed by an exponential regressive law with the exponent, α = 7.74. It is shown that the commonly assumed bilinear softening law of the cohesive interface could lead up to 55% error in the predicted separation of the interface. read less NOT USED (high confidence) H. Wang, J. Guilleminot, and C. Soize, “Modeling uncertainties in molecular dynamics simulations using a stochastic reduced-order basis,” Computer Methods in Applied Mechanics and Engineering. 2019. link Times cited: 14 NOT USED (high confidence) A. Islam et al., “Anomalous temperature dependent thermal conductivity of two-dimensional silicon carbide,” Nanotechnology. 2019. link Times cited: 46 Abstract: Recently, two-dimensional silicon carbide (2D-SiC) has attra… read moreAbstract: Recently, two-dimensional silicon carbide (2D-SiC) has attracted considerable interest due to its exotic electronic and optical properties. Here, we explore the thermal properties of 2D-SiC using reverse non-equilibrium molecular dynamics simulation. At room temperature, a thermal conductivity of ∼313 W mK−1 is obtained for 2D-SiC which is one order higher than that of silicene. Above room temperature, the thermal conductivity deviates the normal 1/T law and shows an anomalous slowly decreasing behavior. To elucidate the variation of thermal conductivity, the phonon modes at different length and temperature are quantified using Fourier transform of the velocity auto-correlation of atoms. The calculated phonon density of states at high temperature shows a shrinking and softening of the peaks, which induces the anomaly in the thermal conductivity. On the other hand, quantum corrections are applied to avoid the freezing effects of phonon modes on the thermal conductivity at low temperature. In addition, the effect of potential on the thermal conductivity calculation is also studied by employing original and optimized Tersoff potentials. These findings provide a means for better understating as well as designing the efficient thermal management of 2D-SiC based electronics and optoelectronics in near future. read less NOT USED (high confidence) A. Mokhalingam, R. Ghaffari, R. Sauer, and S. S. Gupta, “Comparing quantum, molecular and continuum models for graphene at large deformations,” Carbon. 2019. link Times cited: 11 NOT USED (high confidence) J. Hou et al., “Magic auxeticity angle of graphene,” Carbon. 2019. link Times cited: 36 NOT USED (high confidence) K. Ganeshan, M. Hossain, and A. V. van Duin, “Multiply accelerated ReaxFF molecular dynamics: coupling parallel replica dynamics with collective variable hyper dynamics,” Molecular Simulation. 2019. link Times cited: 8 Abstract: ABSTRACT To tackle the time scales required to study complex… read moreAbstract: ABSTRACT To tackle the time scales required to study complex chemical reactions, methods performing accelerated molecular dynamics are necessary even with the recent advancement in high-performance computing. A number of different acceleration techniques are available. Here we explore potential synergies between two popular acceleration methods – Parallel Replica Dynamics (PRD) and Collective Variable Hyperdynamics (CVHD), by analysing the speedup obtained for the pyrolysis of n-dodecane. We observe that PRD + CVHD provides additional speedup to CVHD by reaching the required time scales for the reaction at an earlier wall-clock time. Although some speedup is obtained with the additional replicas, we found that the effectiveness of the inclusion of PRD is depreciated for systems where there is a dramatic increase in reaction rates induced by CVHD. Similar observations were made in the simulation of ethylene-carbonate/Li system, which is inherently more reactive than pyrolysis, indicate that the speedup obtained via the combination of the two acceleration methods can be generalised to most practical chemical systems. read less NOT USED (high confidence) Y. Nagornov and R. Akashi, “AtomREM: Non-empirical seeker of the minimum energy escape paths on many-dimensional potential landscapes without coarse graining,” Comput. Phys. Commun. 2019. link Times cited: 0 NOT USED (high confidence) S. Lee, N. Pugno, and S. Ryu, “Atomistic simulation study on the crack growth stability of graphene under uniaxial tension and indentation,” Meccanica. 2019. link Times cited: 6 NOT USED (high confidence) R. Jana, D. Savio, V. L. Deringer, and L. Pastewka, “Structural and elastic properties of amorphous carbon from simulated quenching at low rates,” Modelling and Simulation in Materials Science and Engineering. 2019. link Times cited: 22 Abstract: We generate representative structural models of amorphous ca… read moreAbstract: We generate representative structural models of amorphous carbon (a-C) from constant-volume quenching from the liquid with subsequent relaxation of internal stresses in molecular dynamics simulations using empirical and machine-learning interatomic potentials. By varying volume and quench rate we generate structures with a range of density and amorphous morphologies. We find that all a-C samples show a universal relationship between hybridization, bulk modulus and density despite having distinctly different cohesive energies. Differences in cohesive energy are traced back to slight changes in the distribution of bond-angles that is likely linked to thermal stability of these structures. read less NOT USED (high confidence) S. Nasiri, K. Wang, M. Yang, Q. Li, and M. Zaiser, “Nickel coated carbon nanotubes in aluminum matrix composites: a multiscale simulation study,” The European Physical Journal B. 2019. link Times cited: 14 NOT USED (high confidence) D. Mandelli, W. Ouyang, M. Urbakh, and O. Hod, “The Princess and the Nanoscale Pea: Long-Range Penetration of Surface Distortions into Layered Materials Stacks.,” ACS nano. 2019. link Times cited: 18 Abstract: The penetration of moiré out-of-plane distortions, formed at… read moreAbstract: The penetration of moiré out-of-plane distortions, formed at the heterogeneous interface of graphene and hexagonal boron nitride (h-BN), into the layered h-BN stack is investigated. For aligned contacts, the estimated characteristic penetration length of ∼4.7 nm suggests that even at the far surface of a ∼25 h-BN layers thick slab stacked atop the contact, a corrugation of ∼0.1 Å, well within experimental resolution, should still be clearly evident. The penetration length is found to strongly reduce with increasing misalignment angle of the graphene/h-BN junction, where the effect of thermal fluctuations conceals the moiré induced corrugation in the bulk. These results can be rationalized by continuum elastic theory arguments for anisotropic media. Our findings, which are expected to generally apply for layered heterojunctions, may serve as a route to control the surface corrugation, adhesive properties, and tribological characteristics of two-dimensional materials. read less NOT USED (high confidence) F. Arca, J. P. Mendez, M. Ortiz, and P. Ariza, “Steric Interference in Bilayer Graphene with Point Dislocations,” Nanomaterials. 2019. link Times cited: 6 Abstract: We present evidence of strong steric interference in bilayer… read moreAbstract: We present evidence of strong steric interference in bilayer graphene containing offset point dislocations. Calculations are carried out with Large-scale Atomic/Molecular Massively Parallel Simulator (LAMMPS) using the Long-Range Carbon Bond-Order Potential (LCBOP) potential of Los et al.. We start by validating the potential in the harmonic response by comparing the predicted phonon dispersion curves to experimental data and other potentials. The requisite force constants are derived by linearization of the potential and are presented in full form. We then continue to validate the potential in applications involving the formation of dislocation dipoles and quadrupoles in monolayer configurations. Finally, we evaluate a number of dislocation quadrupole configurations in monolayer and bilayer graphene and document strong steric interactions due to out-of-plane displacements when the dislocations on the individual layers are sufficiently offset with respect to each other. read less NOT USED (high confidence) R. Babicheva, S. Dmitriev, E. Korznikova, and K. Zhou, “Mechanical Properties of Two-Dimensional sp2-Carbon Nanomaterials,” Journal of Experimental and Theoretical Physics. 2019. link Times cited: 8 NOT USED (high confidence) K. A. O’Hearn, A. Alperen, and H. Aktulga, “Performance optimization of reactive molecular dynamics simulations with dynamic charge distribution models on distributed memory platforms,” Proceedings of the ACM International Conference on Supercomputing. 2019. link Times cited: 4 Abstract: Reactive molecular dynamics (MD) simulations are important f… read moreAbstract: Reactive molecular dynamics (MD) simulations are important for high-fidelity simulations of large systems with chemical reactions. Iterative linear solvers used to dynamically determine atom polarizations in reactive MD models and redundancies related to bond order calculations constitute significant bottlenecks in terms of time-to-solution and the overall scalability of reactive force fields. The objective of this work is to address these bottlenecks. To accomplish this goal, several optimizations are explored including acceleration of the charge model solver through an effective preconditioning technique and a numerical method with reduced communication overheads, as well as initialization and data structure changes for bond order calculations. Detailed scalability analysis of these optimizations and their overall impact is presented. A single-allreduce pipelined non-blocking conjugate gradient (PIPECG) solver coupled with a sparse approximate inverse (SAI) based preconditioner has been observed to yield significant speedups over the baseline standard CG solver with Jacobi preconditioner. These results are significant as they can facilitate scalable simulations of large reactive systems, and presented techniques can be used in other polarizable MD models. read less NOT USED (high confidence) A. Sharifian, A. Moshfegh, A. Javadzadegan, H. H. Afrouzi, M. Baghani, and M. Baniassadi, “Hydrogenation-controlled mechanical properties in graphene helicoids: exceptional distribution-dependent behavior.,” Physical chemistry chemical physics : PCCP. 2019. link Times cited: 15 Abstract: The ever-increasing development of nanotechnology has led to… read moreAbstract: The ever-increasing development of nanotechnology has led to the creation of nanomaterials with spiral geometry such as graphene helicoids (GHs) that are mainly used for mechanical, chemical, and electrical applications. Controlling the properties of these nanomaterials with geometric changes and functionalizations is the most common and accessible task. However, functionalization leads to specific applications. In the present research, using molecular dynamics simulation, mechanical properties of pristine and functionalized GHs have been investigated for various geometries and H-coverages. Also, hydrogenation has been performed for patterned and random distributions. The random H-coverage up to 10 percent results in a decrease in the Young's modulus. Also, by increasing the percentage of H-coverage beyond 10 percent, no conspicuous alteration is observed in the Young's modulus, while the ultimate strain is reduced. By examining the effect of temperature rise on the properties of pristine and functionalized GHs, a sharp decrease in the strain range is observed for both. In addition, it has been shown that the toughness is severely reduced by decreasing the external and internal radii of pristine and functionalized GHs. Investigating the mechanical properties of pristine and hydrogenated GHs leads to better control of the mechanical properties of these nanoparticles and optimal efficiency in nano-scale devices. read less NOT USED (high confidence) O. Glukhova, M. Slepchenkov, and P. Barkov, “Perspectives of application of 2D-matrix of graphene nanoblisters for hydrogen storage,” Saratov Fall Meeting. 2019. link Times cited: 0 Abstract: This paper presents the results of prognostic modeling of th… read moreAbstract: This paper presents the results of prognostic modeling of the process of filling graphene nanoblisters with hydrogen. To carry out numerical molecular dynamics experiments, atomistic models of graphene nanoblisters were constructed in accordance with the data of a natural experiment. A numerical estimate of the mechanical stability of blisters containing structural defects of the atomic network is given. The effect of defects on the process of filling a blister with hydrogen has been studied. It is established that in the process of filling with a blister of hydrogen, atomic hydrogen is almost completely transferred to molecular. For the constructed models of blisters, the limiting concentration of stored hydrogen was found. read less NOT USED (high confidence) O. Glukhova, M. Slepchenkov, and V. Mitrofanov, “Electronic properties of graphen-carbon nanotube films,” Saratov Fall Meeting. 2019. link Times cited: 0 Abstract: This work is devoted to the study of the electronic properti… read moreAbstract: This work is devoted to the study of the electronic properties of graphene-carbon nanotube composite films with horizontal packing of tubes between graphene sheets. Using original method of magnifying glass we constructed the super-cells of mono- and bilayer hybrid composite films with different topology. The influence of topology - the chirality of nanotubes and the distance between them - on the electron-energy characteristics of graphenenanotube composites is studied. Using the self-consistent density functional tight binding (SCC DFTB) method, classical molecular dynamics with application of the AIREBO empirical potential and the method of nonequilibrium Green's functions we revealed new physical laws of the hybrid carbon nanostructures under consideration. read less NOT USED (high confidence) B. Gorelov et al., “Epoxy filled with bare and oxidized multi-layered graphene nanoplatelets: a comparative study of filler loading impact on thermal properties,” Journal of Materials Science. 2019. link Times cited: 19 NOT USED (high confidence) Z. Wang, “Selective Conduction of Organic Molecules via Free-Standing Graphene,” The Journal of Physical Chemistry C. 2019. link Times cited: 9 Abstract: A race is held between 10 species of organic gas molecules o… read moreAbstract: A race is held between 10 species of organic gas molecules on a graphene substrate driven by thermal gradients via molecular dynamics. Fast conduction of the molecules is observed with selectivity for aromatic compounds. This selectivity stems from the fact that the planar structure of the aromatic molecule helps in maintaining a shorter distance to the substrate, which is the key to the driving force at the gas–solid interface. The drift velocity monotonically increases with decreasing molecular density, with no accelerating transport observable even for a single molecule. A nonlinear regime is discovered for the conduction of benzene molecules under large thermal gradients. At low temperature, molecules aggregated and moved collectively along a specific path in the graphene substrate. read less NOT USED (high confidence) M. Höhnerbach and P. Bientinesi, “Accelerating AIREBO: Navigating the Journey from Legacy to High‐Performance Code,” Journal of Computational Chemistry. 2019. link Times cited: 6 Abstract: Despite initiatives to improve the quality of scientific sof… read moreAbstract: Despite initiatives to improve the quality of scientific software, there still is a large presence of legacy code. The focus of such code is usually on domain‐science features, rather than maintainability or highest performance. Additionally, architecture specific optimizations often result in less maintainable code. In this article, we focus on the AIREBO potential from LAMMPS, which exhibits large and complex computational kernels, hindering any systematic optimization. We suggest an approach based on complexity‐reducing refactoring and hardware abstraction and present the journey from the C++ port of a previous Fortran code to performance‐portable, KNC‐hybrid, vectorized, scalable, and optimized code supporting full and reduced precision. The journey includes extensive testing that fixed bugs in the original code. Large‐scale, full‐precision runs sustain speedups of more than 4× (KNL) and 3× (Skylake). © 2019 Wiley Periodicals, Inc. read less NOT USED (high confidence) R. Dhumal, D. K. Bommidi, and I. Salehinia, “Thermal Conductivity of Metal-Coated Tri-Walled Carbon Nanotubes in the Presence of Vacancies-Molecular Dynamics Simulations,” Nanomaterials. 2019. link Times cited: 3 Abstract: Variation in the thermal conductivity of a metal-coated tri-… read moreAbstract: Variation in the thermal conductivity of a metal-coated tri-walled carbon nanotube (3WCNT), in the presence of vacancies, was studied using non-equilibrium molecular dynamics simulations. A Two-Temperature model was used to account for electronic contribution to heat transfer. For 3WCNT with 0.5% and 1% random vacancies, there was 76%, and 86% decrease in the thermal conductivity, respectively. In that order, an overall ~66% and ~140% increase in the thermal conductivity was recorded when 3 nm thick coating of metal (nickel) was deposited around the defective models. We have also explored the effects of tube specific and random vacancies on thermal conductivity of the 3WCNT. The changes in thermal conductivity have also been justified by the changes in vibrational density of states of the 3WCNT and the individual tubes. The results obtained can prove to be useful for countering the detrimental effects of vacancies in carbon nanotubes. read less NOT USED (high confidence) M. Veit, “Designing a machine learning potential for molecular simulation of liquid alkanes.” 2019. link Times cited: 0 Abstract: First-year training funded by the EPSRC as part of the centr… read moreAbstract: First-year training funded by the EPSRC as part of the centre for doctoral training in computational methods for materials science (CDT CMM) under grant number EP/L015552/1.
PhD studentship funding by Shell Global Solutions International B.V.
Computer time provided by ARCHER (http://archer.ac.uk) under the UKCP Consortium, EPSRC grant number EP/P022596/1. read less NOT USED (high confidence) T. Thomas and N. Vinod, “Convective Heat Transfer between Liquid Argon Flows and Heated Carbon
Nanotube Arrays using Molecular Dynamics,” Journal of Applied Fluid Mechanics. 2019. link Times cited: 4 Abstract: This paper presents the molecular dynamics simulations of un… read moreAbstract: This paper presents the molecular dynamics simulations of unconfined forced convective flow through the nanostructures at steady state condition. A better understanding of forced convective flow through the nanostructures is important because of its wide range of applications in nano-scale devices. Present work focuses on the heat transfer process of argon flow over a carbon nanotube and carbon nanotube arrays with constant surface temperature using molecular dynamics simulations. We consider two elementary configurations for the case of carbon nanotube arrays based on the unit cell structure. The simulation domain consists of fixed carbon nanotubes surrounded with the flowing argon atoms. An extensive study of momentum and thermal transport between carbon nanotube and surrounded argon atoms are analyzed from its microscopic state. The heat transfer coefficient is found in the order of 10 W/mK. The method proposed in this paper can be an elementary step for the geometry calculation of nano-structured heat sink in the high heat flux electronic chips. read less NOT USED (high confidence) A. Akbarshahi, A. Rajabpour, M. Ghadiri, and M. M. Barooti, “Influence of various setting angles on vibration behavior of rotating graphene sheet: continuum modeling and molecular dynamics simulation,” Journal of Molecular Modeling. 2019. link Times cited: 9 NOT USED (high confidence) A. Hamzei, E. Jomezadeh, and M. Rezaeizadeh, “Softening Effect in Stretching Stiffness of a Rippled Graphene: Molecular Dynamics Simulation.” 2019. link Times cited: 0 Abstract: In this paper, the stretching stiffness of a rippled graphen… read moreAbstract: In this paper, the stretching stiffness of a rippled graphene is studied using the molecular dynamics simulation. The uneven surface of the rippled graphene is modeled by a random function with different amplitudes and frequencies. Two models of the rippled graphene are simulated. In the first model, it is supposed that the graphene has random wrinkles with different amplitudes and frequencies. It can be regarded as an opened crumpled graphene. In the second model, the uneven surface of the rippled graphene is modeled by the trigonometric sine shapes. The adaptive intermolecular reactive bond order potential function is utilized to model the covalence bonding of the carbon atoms and the Nose-Hoover thermostat is used to control temperature of the system. It is implemented in the software package large scale atomic/molecular massively parallel simulator in order to simulate covalent bond formation between carbon atoms in the structure of graphene layer. Results are presented for both zigzag and armchair rippled graphene sheets with different initial surfaces. It is concluded that the failure strain of a rippled graphene under uniaxial tensile loading is less than that of a flat one. It is also demonstrated that the rippled graphene has softening stretching behavior due to its uneven surface. read less NOT USED (high confidence) S. Verkhoturov et al., “Hypervelocity cluster ion impacts on free standing graphene: Experiment, theory, and applications.,” The Journal of chemical physics. 2019. link Times cited: 9 Abstract: We present results from experiments and molecular dynamics (… read moreAbstract: We present results from experiments and molecular dynamics (MD) simulations obtained with C60 and Au400 impacting on free-standing graphene, graphene oxide (GO), and graphene-supported molecular layers. The experiments were run on custom-built ToF reflectron mass spectrometers with C60 and Au-LMIS sources with acceleration potentials generating 50 keV C60 2+ and 440-540 keV Au400 4+. Bombardment-detection was in the same mode as MD simulation, i.e., a sequence of individual projectile impacts with separate collection/identification of the ejecta from each impact in either the forward (transmission) or backward (reflection) direction. For C60 impacts on single layer graphene, the secondary ion (SI) yields for C2 and C4 emitted in transmission are ∼0.1 (10%). Similar yields were observed for analyte-specific ions from submonolayer deposits of phenylalanine. MD simulations show that graphene acts as a trampoline, i.e., they can be ejected without destruction. Another topic investigated dealt with the chemical composition of free-standing GO. The elemental composition was found to be approximately COH2. We have also studied the impact of Au400 clusters on graphene. Again SI yields were high (e.g., 1.25 C-/impact). 90-100 Au atoms evaporate off the exiting projectile which experiences an energy loss of ∼72 keV. The latter is a summation of energy spent on rupturing the graphene, ejecting carbon atoms and clusters and a dipole projectile/hole interaction. The charge distribution of the exiting projectiles is ∼50% neutrals and ∼25% either negatively or positively charged. We infer that free-standing graphene enables detection of attomole to zeptomole deposits of analyte via cluster-SI mass spectrometry. read less NOT USED (high confidence) K. Xiao, J. Li, X. Wu, H. Liu, C. Huang, and Y. Li, “Nanoindentation of thin graphdiyne films: Experiments and molecular dynamics simulation,” Carbon. 2019. link Times cited: 26 NOT USED (high confidence) O. Glukhova and M. Slepchenkov, “Theoretical study of the interaction of the electromagnetic field of laser radiation with a mixture of single-walled carbon nanotubes in a protein matrix,” BiOS. 2019. link Times cited: 0 Abstract: In this paper, we investigated absorption of electromagnetic… read moreAbstract: In this paper, we investigated absorption of electromagnetic waves in the infrared (IR) visible- ultraviolet (UV) ranges for a 3D-wireframe material based on carbon nanotubes (CNTs) and albumin using the methods of mathematical modeling and revealed the regularities of absorption on the wavelengths and chirality of extended nanotubes. We investigated influence of electromagnetic field on single-walled CNTs (SWCNTs) in the protein matrix of albumin, when the CNTs contain defects. Investigations of dependence of the absorption on various types of defect and number of defects for tubes with different types of conductivity in the protein matrix of albumin were carried out. read less NOT USED (high confidence) F. Guinea and N. Walet, “Continuum models for twisted bilayer graphene: Effect of lattice deformation and hopping parameters,” Physical Review B. 2019. link Times cited: 91 Abstract: We analyze a description of twisted graphene bilayers, that … read moreAbstract: We analyze a description of twisted graphene bilayers, that incorporates deformation of the layers due to the nature modern interlayer potentials, and a modification of the hopping parameters between layers in the light of the classic Slonczewski-Weiss-McClure parametrisation. We shall show that flat bands result in all cases, but that their nature can be rather different. We will show how to construct a more general reduction to a continuum model, and show that even though such a model can be constructed, its complexity increases, requiring more coupling parameters to be included, and the full in-layer dispersion to be taken into account. We conclude that the combination of all these effects will have a large impact on the wave functions of the flat bands, and that changes in the detail of the underlying models can lead to significant changes. A robust conclusion is that the natural strength of the interlayer couplings is higher than usually assumed, which causes additional Dirac points to appear for the standard magic angles. This gives rise to a degeneracy at the $\Gamma$ point. Since the appearance of a gap at the $\Gamma$ point is crucial for the construction of the Wannier states which are used in the standard descriptions of superconductivity, such an approach not be robust. read less NOT USED (high confidence) K. Krylova, J. Baimova, and R. Mulyukov, “Effect of deformation on dehydrogenation mechanisms of crumpled graphene: molecular dynamics simulation,” Letters on Materials. 2019. link Times cited: 13 Abstract: In this work, the effect of hydrostatic compression on dehyd… read moreAbstract: In this work, the effect of hydrostatic compression on dehydrogenation of crumpled graphene is investigated using molecular dynamics simulation. Crumpled graphene is a carbon structure composed of a large number of graphene flakes interacted by van der Waals forces. These ultralight materials have unique mechanical properties and can be used in various applications, for example, in hydrogen technologies. One of the important issues in the study of carbon structures is the search for the new materials for hydrogen storage and transportation. In the present work, it is shown that pores of crumpled graphene can be used as the caves for the storage of hydrogen atoms and molecules, and hydrostatic compression is an effective way of keeping hydrogen inside the caves. Based on the analysis of changes in the capacity of hydrogen absorption, it is found that the application of deformation leads to a significant improvement in the sorption characteristics of crumpled graphene. At the same time, hydrostatic compression of crumpled graphene leads to an increase in volumetric hydrogen capacity. It has been established that, with an increase in the degree of compression, the number of hydrogen atoms leaving the pores of crumpled graphene decreases after exposure at 300 K. It is expected that the subsequent heating of the structure will lead to the release of hydrogen due to the opening of graphene flakes and an increase in thermal fluctuation oscillations of atoms, which is important for the dehydrogenation process. read less NOT USED (high confidence) K. Rego and V. Meunier, “Carbon nanotube knots,” AIP Advances. 2019. link Times cited: 7 Abstract: The structural and mechanical properties of carbon nanotube … read moreAbstract: The structural and mechanical properties of carbon nanotube knots are investigated using molecular dynamics simulations. Using parametric representations of mathematical (harmonic) knots, a method is provided for calculating the initial atomic coordinates of carbon nanotubes in the shape of arbitrary knots for use in molecular dynamics simulations. A computational stress-strain testing scheme is implemented and applied to (5, 5) knotted carbon nanotubes to determine their tensile strength, plastic limit, and relative knot strength. Stress-strain curves are given for (5, 5) carbon nanotube stopper knots. It is determined that a carbon nanotube’s tensile strength is reduced to at most 1/3 of its original strength when tied into a knot. It is also shown that it is possible to form tight and stable carbon nanotube knots by subjecting the knots to stress beyond the plastic limit. In contrast, loose knots stabilized by noncovalent interactions are not dynamically stable and spontaneously untie. To help understand the stability of loose carbon nanotube knots, the relationship between bending strain energy and curvature is studied using carbon tori. Our study demonstrates the possibility to tie carbon nanotubes into various stable knots and provides a general framework for the study of other macromolecular knots relevant to potentially useful nanotechnology.The structural and mechanical properties of carbon nanotube knots are investigated using molecular dynamics simulations. Using parametric representations of mathematical (harmonic) knots, a method is provided for calculating the initial atomic coordinates of carbon nanotubes in the shape of arbitrary knots for use in molecular dynamics simulations. A computational stress-strain testing scheme is implemented and applied to (5, 5) knotted carbon nanotubes to determine their tensile strength, plastic limit, and relative knot strength. Stress-strain curves are given for (5, 5) carbon nanotube stopper knots. It is determined that a carbon nanotube’s tensile strength is reduced to at most 1/3 of its original strength when tied into a knot. It is also shown that it is possible to form tight and stable carbon nanotube knots by subjecting the knots to stress beyond the plastic limit. In contrast, loose knots stabilized by noncovalent interactions are not dynamically stable and spontaneously untie. To help understa... read less NOT USED (high confidence) M. Vassaux, R. Richardson, and P. Coveney, “The heterogeneous multiscale method applied to inelastic polymer mechanics,” Philosophical transactions. Series A, Mathematical, physical, and engineering sciences. 2019. link Times cited: 15 Abstract: Mechanisms emerging across multiple scales are ubiquitous in… read moreAbstract: Mechanisms emerging across multiple scales are ubiquitous in physics and methods designed to investigate them are becoming essential. The heterogeneous multiscale method (HMM) is one of these, concurrently simulating the different scales while keeping them separate. Owing to the significant computational expense, developments of HMM remain mostly theoretical and applications to physical problems are scarce. However, HMM is highly scalable and is well suited for high performance computing. With the wide availability of multi-petaflop infrastructures, HMM applications are becoming practical. Rare applications to mechanics of materials at low loading amplitudes exist, but are generally confined to the elastic regime. Beyond that, where history-dependent, irreversible or nonlinear mechanisms occur, not only computational cost but also data management issues arise. The micro-scale description loses generality, developing a specific microstructure based on the deformation history, which implies inter alia that as many microscopic models as discrete locations in the macroscopic description must be simulated and stored. Here, we present a detailed description of the application of HMM to inelastic mechanics of materials, with emphasis on the efficiency and accuracy of the scale-bridging methodology. The method is well suited to the estimation of macroscopic properties of polymers (and derived nanocomposites) starting from knowledge of their atomistic chemical structure. Through application of the resulting workflow to polymer fracture mechanics, we demonstrate deviation in the predicted fracture toughness relative to a single-scale molecular dynamics approach, thus illustrating the need for such concurrent multiscale methods in the predictive estimation of macroscopic properties. This article is part of the theme issue ‘Multiscale modelling, simulation and computing: from the desktop to the exascale’. read less NOT USED (high confidence) I. Lebedeva, A. Minkin, A. Popov, and A. Knizhnik, “Elastic constants of graphene: Comparison of empirical potentials and DFT calculations,” Physica E: Low-dimensional Systems and Nanostructures. 2019. link Times cited: 38 NOT USED (high confidence) E. Yakub, “Role of short-range atom-atom forces in formation of the orientational structure of simple molecular crystals,” Low Temperature Physics. 2019. link Times cited: 1 Abstract: An attempt is made to explain the appearance of certain phas… read moreAbstract: An attempt is made to explain the appearance of certain phases having different orientational and spatial structures in the phase diagram of crystals formed by tetrahedral molecules. The classical Monte Carlo method is applied to solid heavy methane CD4 and the role of various contributions to the non-central intermolecular interactions in formation of the orientational structure in simple molecular crystals is assessed. read less NOT USED (high confidence) G. Amirkhanova, A. Gorchakov, and A. Z. Duysenbaeva, “The Application of the Methodology of Fast Automatic Differentiation to Calculate the Gradient of the Potential REBO (LAMMPS),” DEStech Transactions on Computer Science and Engineering. 2019. link Times cited: 0 Abstract: In this paper, we consider the problem of finding the energy… read moreAbstract: In this paper, we consider the problem of finding the energy minimum of the aggregate of atoms of a fragment of a planar crystal lattice. To calculate the energy, the Brennor or REBO (reactive empirical bond order) method is used. The REBO potential is calculated using the LAMMPS package (Large-scale Atomic / Molecular Massively Parallel Simulator). As optimization methods, both the gradientless methods and the methods using the first derivatives of the functional are used. To calculate the derivatives, the combined differentiation method, implemented in the LAMMPS package, is used, using sequentially forward and reverse methods of fast automatic differentiation. read less NOT USED (high confidence) M. A. G. Cunha and M. Robbins, “Determination of pressure-viscosity relation of 2,2,4-trimethylhexane by all-atom molecular dynamics simulations,” Fluid Phase Equilibria. 2019. link Times cited: 15 NOT USED (high confidence) G. S. Dhaliwal, P. Nair, and C. V. Singh, “Uncertainty analysis and estimation of robust AIREBO parameters for graphene,” Carbon. 2019. link Times cited: 43 NOT USED (high confidence) A. Minkin, I. Lebedeva, A. Popov, and A. Knizhnik, “The Application of Empirical Potentials for Calculation of Elastic Properties of Graphene,” Technical Physics Letters. 2019. link Times cited: 3 NOT USED (high confidence) M. Imran et al., “Anisotropic Thermal and Mechanical Characteristics of Graphene: A Molecular Dynamics Study,” Journal of Experimental and Theoretical Physics. 2019. link Times cited: 2 NOT USED (high confidence) H. Almisbahi, “Analysing graphene vibrations via molecular dynamics simulations and dimension reduction techniques.” 2019. link Times cited: 0 Abstract: Graphene was first isolated in the lab in 2003 and this work… read moreAbstract: Graphene was first isolated in the lab in 2003 and this work was first published in 2004 by a research team at The University of Manchester. Since that date, graphene research has exploded due to its special properties. Phonons and molecular dynamic simulation provide valuable tools to study the molecular systems under different structure forms. They are helpful to study graphene ribbons and defects. On the other hand, many machine learning techniques were extensively used to analyse the enormous amounts of data resulted from the molecular simulations.
As such, this thesis aimed to use one of the machine learning techniques to study phonons of graphene with single vacancy defect and graphene armchair nanoribbons. PCA can be used to transform the atomic velocities into orthogonal eigenvectors such that each eigenvector represents one of the phonon modes of graphene. This is helpful to visualize the atomic motion of a specific phonon mode. To provide orthogonal eigenvectors, PCA needs the data to be of gaussian distribution. The atomic velocities resulted from the molecular simulations follow gaussian distribution at the equilibrium state. Hence, the assumption of gaussian distribution needed by PCA is achieved. However, only some of the phonon modes can be calculated from the atomic velocities in their real space. Most of the phonon modes are calculated after transforming the atomic velocities to a reciprocal space (k space) using spatial Fourier transform. The k space atomic velocities are not following gaussian distribution. This thesis introduced a novel method to use PCA to isolate and visualize the phonon modes extracted from the k space velocities.
To prove the feasibility of using PCA to isolate k space phonons, we conducted classical molecular simulations of graphene with different structures. The effect of single vacancy defect on graphene phonons was studied in comparison to the perfect graphene. In addition, the effect of the armchair ribbon width on graphene phonon modes was investigated.
The results of the conducted molecular simulations were used with PCA to visualize some of the phonon modes of pristine graphene and armchair nanoribbons of graphene. We used PCA to present the evolution of the atomic motion of specific k space phonon modes of armchair ribbons: the first overtone of TA phonon mode and the highest overtone of TO phonon mode. The presented motions showed that the breathing like mode is a transition state between two opposite atomic motions of TA mode.
In the method we introduced using PCA, we used the eigenvectors with the lowest eigenvalues to study the Fourier transformed atomic velocities. This method rotated the k space atomic velocities into the eigenvectors with the lowest eigenvalues which helped to isolate and visualize the k space phonon modes. read less NOT USED (high confidence) A. Golzari and H. N. Pishkenari, “Vibrational Analysis of Fullerene Hydrides Using AIREBO Potential,” Scientia Iranica. 2019. link Times cited: 1 Abstract: In this paper, the vibrational properties of fullerene hydri… read moreAbstract: In this paper, the vibrational properties of fullerene hydrides with the chemical formula C60H2n are investigated using a method based on the potential energy of the molecule. The potential used in this methodology is AIREBO (Adaptive Intermolecular Reactive Empirical Bond Order). Using this interatomic potential, some of the most important frequencies of the fullerene hydrides, such as the breathing mode frequency, were calculated and then analyzed. It was observed that in addition to the number of hydrogen atoms in the structure, their position on the C60 cage has a significant effect on the natural frequency corresponding to a particular mode shape. The results obtained by this method have been compared and validated with quantum mechanics and experimental observations. The simulations results demonstrate that the proposed method is capable of calculating the vibrational properties of fullerene hydrides with high precision and low computational cost. read less NOT USED (high confidence) H. Chan et al., “Machine learning coarse grained models for water,” Nature Communications. 2019. link Times cited: 96 NOT USED (high confidence) W. Zheng, C. Sun, B. Wen, and B. Bai, “Moving mechanisms of the three-phase contact line in a water–decane–silica system,” RSC Advances. 2019. link Times cited: 8 Abstract: The movement of the three-phase contact line with chain mole… read moreAbstract: The movement of the three-phase contact line with chain molecules in the liquid phase displays more complex mechanisms compared to those in the usual liquid–liquid–solid systems and even to the gas–liquid–solid systems controlled by the traditional single-molecule adsorption–desorption mechanisms. By introducing decane molecules with chain structures, we demonstrate from molecular dynamics insights that the moving mechanism of the contact line in a water–decane–silica system is totally different from traditional mechanisms. Three different wettability-related moving mechanisms including “Roll up”, “Piston” and “Shear” are revealed corresponding to the hydrophilic, intermediate and hydrophobic three-phase wettability, respectively. In the “Roll up” mechanism, the decane molecules are rolled up by the competitively adsorbed water molecules and then move forward under the driving force; when the “Piston” mechanism happens, the decane molecules are pushed by the piston-like water phase owing to the comparable adsorption interactions of the two liquids on the solid surface; in the “Shear” mechanism, the contact line is hard to drive due to the stronger decane–silica interactions but the decane molecules far away from the solid surface will move forward. Besides, the time-averaged velocity of the moving contact line is greatly related to the moving mechanisms. For the “Roll up” mechanism, the contact line velocity increases first and then reaches a steady value; for the “Piston” mechanism, the contact line velocity has a maximum value at the start-up stage and then decreases to a stable value; for the “Shear” mechanism, the contact line velocity fluctuates around zero due to the thermal fluctuation of the molecules. Additionally, the mean distance from Molecular Kinetics Theory increases with decreasing hydrophilicity and the displacement frequency in “Roll up” mechanism is 2 orders of magnitude higher than that in the “Piston” mechanism, further demonstrating the different moving mechanisms from a quantitative point of view. read less NOT USED (high confidence) W. Jian, X. Yao, Y. Sun, Z. Xie, and X. Zhang, “Size-dependent vibration analysis of carbon nanotubes,” Journal of Materials Research. 2019. link Times cited: 1 Abstract: Considering the nonlocal small-scale effect and surface effe… read moreAbstract: Considering the nonlocal small-scale effect and surface effect, we perform the size-dependent vibration analysis of carbon nanotube (CNT). The modified governing equations for CNT’s vibration behaviors are derived by using the nonlocal Euler–Bernoulli and Timoshenko beam models, together with the consideration of surface tension and surface elasticity. According to the numerical experiments, both small-scale effect and surface effect make a substantial difference. For flexural vibration, size effect for CNT’s vibration behaviors weakens with the increase of its diameter, but strengthens with the increase of the length–diameter ratio; for shear vibration with constant length–diameter ratio, a nonlinear correlation between size effect and CNT’s diameter exists, suggesting that there is a typical diameter for CNTs, which corresponds to the “strongest” size effect. In addition, the effects of elastic substrate modulus, temperature change, and axial preloading on the vibration behaviors and their size-dependence are analyzed, respectively. read less NOT USED (high confidence) J. Yeo, G. Jung, F. J. Martín-Martínez, J. Beem, Z. Qin, and M. Buehler, “Multiscale Design of Graphyne‐Based Materials for High‐Performance Separation Membranes,” Advanced Materials. 2019. link Times cited: 29 Abstract: By varying the number of acetylenic linkages connecting arom… read moreAbstract: By varying the number of acetylenic linkages connecting aromatic rings, a new family of atomically thin graph‐n‐yne materials can be designed and synthesized. Generating immense scientific interest due to its structural diversity and excellent physical properties, graph‐n‐yne has opened new avenues toward numerous promising engineering applications, especially for separation membranes with precise pore sizes. Having these tunable pore sizes in combination with their excellent mechanical strength to withstand high pressures, free‐standing graph‐n‐yne is theoretically posited to be an outstanding membrane material for separating or purifying mixtures of either gases or liquids, rivaling or even dramatically exceeding the capabilities of current, state‐of‐art separation membranes. Computational modeling and simulations play an integral role in the bottom‐up design and characterization of these graph‐n‐yne materials. Thus, here, the state of the art in modeling α‐, β‐, γ‐, δ‐, and 6,6,12‐graphyne nanosheets for synthesizing graph‐2‐yne materials and 3D architectures thereof is discussed. Different synthesis methods are described and a broad overview of computational characterizations of graph‐n‐yne's electrical, chemical, and thermal properties is provided. Furthermore, a series of in‐depth computational studies that delve into the specifics of graph‐n‐yne's mechanical strength and porosity, which confer superior performance for separation and desalination membranes, are reviewed. read less NOT USED (high confidence) J. Zhang, “Vibrations of van der Waals heterostructures: A study by molecular dynamics and continuum mechanics,” Journal of Applied Physics. 2019. link Times cited: 5 Abstract: The vibration behaviors of van der Waals (vdW) heterostructu… read moreAbstract: The vibration behaviors of van der Waals (vdW) heterostructures are studied based on molecular dynamics (MD) simulations and continuum mechanics modelling in this paper. Graphene/hexagonal boron nitride and graphene/silicene systems are considered as two typical examples of heterostructures studied here. Our MD results show that the resonance frequency of vdW heterostructures grows as their layer number increases and tends to be saturated when the layer number is relatively large. These findings deviate from results of the conventional composite beam (CB) model of vdW heterostructures. By abandoning the assumptions in the CB model, we propose a novel multiple beam (MB) model giving a result that agrees well with MD results. We find from the MB model that compared to other factors the interlayer shearing effect plays the key role in determining the resonance behaviors of vdW heterostructures. Considering this fact, we further simplify the MB model to a much simpler form which gives a simple but precise description of the vibration behaviors of vdW heterostructures. This simplified MB model suggests that the resonance frequency of vdW heterostructures can be optimized by changing their total mass, the sum of bending stiffness of their component layers, and the sum of interlayer shear modulus of their vdW layers.The vibration behaviors of van der Waals (vdW) heterostructures are studied based on molecular dynamics (MD) simulations and continuum mechanics modelling in this paper. Graphene/hexagonal boron nitride and graphene/silicene systems are considered as two typical examples of heterostructures studied here. Our MD results show that the resonance frequency of vdW heterostructures grows as their layer number increases and tends to be saturated when the layer number is relatively large. These findings deviate from results of the conventional composite beam (CB) model of vdW heterostructures. By abandoning the assumptions in the CB model, we propose a novel multiple beam (MB) model giving a result that agrees well with MD results. We find from the MB model that compared to other factors the interlayer shearing effect plays the key role in determining the resonance behaviors of vdW heterostructures. Considering this fact, we further simplify the MB model to a much simpler form which gives a simple but precise des... read less NOT USED (high confidence) X. Lin, Q. Han, and J. Huang, “Effect of defects on the motion of carbon nanotube thermal actuator,” Nanotechnology Reviews. 2019. link Times cited: 18 Abstract: Using molecular dynamics simulations, we investigate the mov… read moreAbstract: Using molecular dynamics simulations, we investigate the movement behavior of double-walled carbon nanotube containing single atom vacancy defect and Stone–Wales defect. The carbon nanotube thermal actuator consists of a short outer tube and a long inner tube driven under temperature gradient. It is found that the presence of these defects introduces resistance of the nanotube systems, which affects their amplitude and speed. The oscillation motion of the outer nanotube is found possible to be produced, which can be achieved by devising proper initial position of the outer tube, the defect type and the temperature gradient. Our results demonstrate the effect of defects on the motion of carbon nanotubes and show that it is possible to control and tune the motion behavior of nanotubes through the introduction of defects. read less NOT USED (high confidence) Y. Fan, Y. Xiang, and H. S. Shen, “Temperature-dependent negative Poisson’s ratio of monolayer graphene: Prediction from molecular dynamics simulations,” Nanotechnology Reviews. 2019. link Times cited: 25 Abstract: A temperature-dependent intrinsic property of monolayer grap… read moreAbstract: A temperature-dependent intrinsic property of monolayer graphene, the negative Poisson’s ratio (NPR), is investigated in the present study. The classical molecular dynamics (MD) method is employed and the Erhart-Albe hybrid potential, i.e. the combination of the reactive empirical bond order (REBO) and the Tersoff potentials, is used for the graphene sheet in the numerical simulation. In the simulation process, the graphene sheet is assumed to be free standing with in-plane periodical boundary condition and under an ambient temperature up to 1000 K. Our study shows that the graphene NPR is decreased with the increase of temperature. Besides, we also perform the simulation of the graphene negative temperature expansion coefficient (NTEC) as an indirect validation of the present MD model. The characteristics of the nonlinear variations for both the NPR and the NTEC of a pristine graphene sheet are investigated. Our MD results at low temperature (0.1 K) further prove the intrinsic and anisotropic property of NPR for graphene. read less NOT USED (high confidence) X. Qiu, J. Mankowski, J. Dickens, A. Neuber, and R. P. Joshi, “Model evaluations of surface modification by energetic incident carbon atoms on graphene coated copper electrodes,” Physics of Plasmas. 2019. link Times cited: 1 NOT USED (high confidence) L. Wang, K. Cai, Y. Xie, and Q. Qin, “Thermal shrinkage and stability of diamondene nanotubes,” Nanotechnology. 2018. link Times cited: 9 Abstract: By curving a rectangular diamondene, an sp2/sp3 composite ca… read moreAbstract: By curving a rectangular diamondene, an sp2/sp3 composite carbon film, a diamondene nanotube (DNT) can be formed when the two straight edges are sewn together. In this study, thermal stabilities of DNTs are investigated using molecular dynamics simulation approaches. An interesting thermal shrinkage of damaged DNTs is discovered. Results indicate that DNTs have critical temperatures between 320 K and 350 K. At temperatures higher than the critical value, the interlayer bonds, i.e., the sp3–sp3 bonds, may break. The broken ratio of the interlayer bonds mainly depends on the temperature. For the DNT with a high broken ratio of interlayer bonds, it has thermal shrinkage in both the cross section and tube axis. The sp2–sp3 bonds in either the inner or the outer surface are much more stable. Even at 900 K, only a few sp2–sp3 bonds break. These properties can be used in the design of metamaterials. read less NOT USED (high confidence) L. Rysaeva, J. Baimova, D. Lisovenko, V. Gorodtsov, and S. Dmitriev, “Elastic Properties of Fullerites and Diamond‐Like Phases,” physica status solidi (b). 2018. link Times cited: 26 Abstract: Diamond‐like structures, that include sp2 and sp3 hybridized… read moreAbstract: Diamond‐like structures, that include sp2 and sp3 hybridized carbon atoms, are of considerable interest nowadays. In the present work, various carbon auxetic structures are studied by the combination of molecular dynamics (MD) and analytical approach. Two fullerites based on the fullerene C60 and fullerene‐like molecule C48 are investigated as well as diamond‐like structures based on other fullerene‐like molecules (called fulleranes), carbon nanotubes (called tubulanes) and graphene sheets. MD is used to find the equilibrium states of the structures and calculate compliance and stiffness coefficients for stable configurations. Analytical methods are used to calculate the engineering elastic coefficients (Young's modulus, Poisson's ratio, shear modulus and bulk modulus), and to study their transformation under rotation of the coordinate system. All the considered structures are partial auxetics with the negative value of Poisson's ratio for properly chosen tensile directions. It is shown that some of these structures, in a particular tension direction, have a very high Young's modulus, that is, 1852 GPa for tubulane TA6. read less NOT USED (high confidence) A. Savin and M. Mazo, “The COMPASS force field: Validation for carbon nanoribbons,” Physica E: Low-dimensional Systems and Nanostructures. 2018. link Times cited: 23 NOT USED (high confidence) A. Burian, J. Dore, and K. Jurkiewicz, “Structural studies of carbons by neutron and x-ray scattering,” Reports on Progress in Physics. 2018. link Times cited: 12 Abstract: Carbon can have many different forms and the characterisatio… read moreAbstract: Carbon can have many different forms and the characterisation of structural features on a length scale of 1 Å to 10 μm is important in defining its physical and chemical properties for the various forms. The use of either electro-magnetic (x-ray) or particle (neutron) beams plays an important role in determining these characteristics. In this paper, we review the various techniques that are used to determine the structural features by experimental means and how the data are processed to give the required information in a suitable form for detailed analysis by computer simulation. Diffraction methods are used for studies of the atomic arrangement and small-angle scattering techniques are used for studies of microporosity in the sample materials. The experimental data obtained from a wide range of different carbon materials are considered and how these results can be used as a basis for modelling the structures in a quantitative manner is also considered. This information underpins their use as active components in a wide range of functional materials. read less NOT USED (high confidence) D. Shiri and A. Isacsson, “Heat-to-mechanical energy conversion in graphene: Manifestation of Umklapp enhancement with strain,” Journal of Applied Physics. 2018. link Times cited: 1 Abstract: Conversion of heat-flux from a steady state temperature diff… read moreAbstract: Conversion of heat-flux from a steady state temperature difference to mechanical vibration is demonstrated in graphene nanoribbons using direct non-equilibrium molecular dynamics. We observe that this effect is independent of the method of imposing the temperature gradient, heat flux, as well as imposed boundary conditions. We propose that simply dividing the nanoribbon in long and short sections using a partially immobilized area will lead to excitation of long-wavelength vibrations into the long section of the nanoribbon. This results in simpler architectures for heat-to-vibration converter devices based on graphene. Furthermore, we observe that applying tensile axial strain to nanoribbons facilitates vibrational instability by reducing the required threshold heat flux or the temperature gradient. Finally, we discuss the role played by Umklapp scattering for physical mechanisms behind these observations. read less NOT USED (high confidence) Q. Zhang, X. Ma, and Y. Zhao, “Adhesion Behavior between Multilayer Graphene and Semiconductor Substrates,” Applied Sciences. 2018. link Times cited: 2 Abstract: A high bonding strength between graphene and a semiconductor… read moreAbstract: A high bonding strength between graphene and a semiconductor surface is significant to the performance of graphene-based Micro-Electro Mechanical Systems/Nano-Electro Mechanical Systems (MEMS/NEMS) devices. In this paper, by applying a series of constant vertical upward velocities (Vup) to the topmost layer of graphene, the exfoliation processes of multilayer graphene (one to ten layers) from an Si semiconductor substrate were simulated using the molecular dynamics method, and the bonding strength was calculated. The critical exfoliation velocities, adhesion forces, and adhesion energies to exfoliate graphene were obtained. In a system where the number of graphene layers is two or three, there are two critical exfoliation velocities. Graphene cannot be exfoliated when the Vup is lower than the first critical velocity, although the total number of graphene layers can be exfoliated when the Vup is in the range between the first critical velocity and second critical velocity. Only the topmost layer can be exfoliated to be free from the Si surface if the applied Vup is greater than the second critical velocity. In systems where the number of graphene layers is four to ten, only the topmost layer can be free and exfoliated if the exfoliation velocity is greater than the critical velocity. It was found that a relatively low applied Vup resulted in entire graphene layers peeling off from the substrate. The adhesion forces of one-layer to ten-layer graphene systems were in the range of 25.04 nN–74.75 nN, and the adhesion energy levels were in the range of 73.5 mJ/m2–188.45 mJ/m2. These values are consistent with previous experimental results, indicating a reliable bond strength between graphene and Si semiconductor surfaces. read less NOT USED (high confidence) R. Archibald, J. Krogel, and P. Kent, “Gaussian process based optimization of molecular geometries using statistically sampled energy surfaces from quantum Monte Carlo.,” The Journal of chemical physics. 2018. link Times cited: 11 Abstract: Optimization of atomic coordinates and lattice parameters re… read moreAbstract: Optimization of atomic coordinates and lattice parameters remains a significant challenge to the wide use of stochastic electronic structure methods such as quantum Monte Carlo (QMC). Measurements of the forces and stress tensor by these methods contain statistical errors, challenging conventional gradient-based numerical optimization methods that assume deterministic results. Additionally, forces are not yet available for some methods, wavefunctions, and basis sets and when available may be expensive to compute to sufficiently high statistical accuracy near energy minima, where the energy surfaces are flat. Here, we explore the use of Gaussian process based techniques to sample the energy surfaces and reduce sensitivity to the statistical nature of the problem. We utilize Latin hypercube sampling, with the number of sampled energy points scaling quadratically with the number of optimized parameters. We show these techniques may be successfully applied to systems consisting of tens of parameters, demonstrating QMC optimization of a benzene molecule starting from a randomly perturbed, broken symmetry geometry. read less NOT USED (high confidence) A. Obliger, P.-L. Valdenaire, N. Capit, F. Ulm, R. Pellenq, and J.-M. Leyssale, “Poroelasticity of Methane-Loaded Mature and Immature Kerogen from Molecular Simulations.,” Langmuir : the ACS journal of surfaces and colloids. 2018. link Times cited: 34 Abstract: While hydrocarbon expulsion from kerogen is certainly the ke… read moreAbstract: While hydrocarbon expulsion from kerogen is certainly the key step in shale oil/gas recovery, the poromechanical couplings governing this desorption process, taking place under a significant pressure gradient, are still poorly understood. Especially, most molecular simulation investigations of hydrocarbon adsorption and transport in kerogen have so far been performed under the rigid matrix approximation, implying that the pore space is independent of pressure, temperature, and fluid loading, or in other words, neglecting poromechanics. Here, using two hydrogenated porous carbon models as proxies for immature and overmature kerogen, that is, highly aliphatic hydrogen-rich vs highly aromatic hydrogen-poor models, we perform an extensive molecular-dynamics-based investigation of the evolution of the poroelastic properties of those matrices with respect to temperature, external pressure, and methane loading as a prototype alkane molecule. The rigid matrix approximation is shown to hold reasonably well for overmature kerogen even though accounting for flexibility has allowed us to observe the well-known small volume contraction at low fluid loading and temperature. Our results demonstrate that immature kerogen is highly deformable. Within the ranges of conditions considered in this work, its density can double and its accessible porosity (to a methane molecule) can increase from 0 to ∼30%. We also show that these deformations are significantly nonaffine (i.e., nonhomogeneous), especially upon fluid adsorption or desorption. read less NOT USED (high confidence) H. Zhan, G. Zhang, C. Yang, and Y. T. Gu, “Breakdown of Hooke’s law at the nanoscale - 2D material-based nanosprings.,” Nanoscale. 2018. link Times cited: 23 Abstract: A helical spring is one of the fundamental mechanical elemen… read moreAbstract: A helical spring is one of the fundamental mechanical elements commonly used throughout human history, whose deformation characteristic is well described by Hooke's law. Based on in silico studies, this work reported a novel structural transition from a homogeneous morphology to an inhomogeneous configuration in the normal helical nanospring (NS) for the first time, which provides rigorous proof for the "breakdown of Hooke's law" at the nanoscale. Theoretical analyses and numerical results show that the transition is expected to occur in a wide range of two-dimensional (2D) material based normal helical NSs, and the driving mechanism is the interlayer van der Waals (vdW) interactions. A series spring model is established to describe this transition phenomenon by considering the elastic deformation energy and interlayer interactions, which explicitly illustrates the competition between the surface energy and the elastic constant in controlling such a structural transition. It is expected that the structural transition is strictly limited to the nanoscale system, where the interlayer interactions exert significant influence on its mechanical properties. This study provides a comprehensive understanding of the non-Hookean behavior of NSs, and sheds light on their applications in micro- and nanomachines or mechanical systems, such as nanoelectromechanical systems, nanorobots or soft machines. read less NOT USED (high confidence) M. Motamedi and A. Esfandiarpour, “Residual strain in graphene: study of temperature and crack effect,” Scientia Iranica. 2018. link Times cited: 4 Abstract: Graphene is a thin sheet with special properties and complic… read moreAbstract: Graphene is a thin sheet with special properties and complicated mechanical behavior. It’s important to study graphene experimentally and theoretically. Stone–Wales defects, cracks and atom vacancy are popular defects in carbon allotropes especially in graphene. In this paper, residual strain in graphene was discussed. At first, stress-strain curve of non-defected graphene sheet was obtained using molecular dynamics simulation and effect of temperature on mechanical properties of graphene was obtained. Then, four different cracks were considered in center of graphene sheets. Stress-strain curves of defected graphene sheets with different tension strain rates were plotted. The results showed that cracks lead to the graphene to fracture sooner. Also, increasing temperature lead to the Young’s modulus of graphene decreases and graphene fractured at lower strain. On the other hand, residual strain of non-defected and cracked graphene increased by increasing temperature from 200 K to 1200 K. It means that graphene had more plasticity behavior by increasing temperature. read less NOT USED (high confidence) B. K. Wittmaack, A. Volkov, and L. Zhigilei, “Mesoscopic modeling of the uniaxial compression and recovery of vertically aligned carbon nanotube forests,” Composites Science and Technology. 2018. link Times cited: 25 NOT USED (high confidence) B. D. Jensen, G. Odegard, J.-W. Kim, G. Sauti, E. Siochi, and K. Wise, “Simulating the effects of carbon nanotube continuity and interfacial bonding on composite strength and stiffness.,” Composites science and technology. 2018. link Times cited: 25 NOT USED (high confidence) J. Zhang, “A nonlocal continuum model for the buckling of carbon honeycombs,” Meccanica. 2018. link Times cited: 7 NOT USED (high confidence) M. Li, H. Li, F. Li, Z. Kang, and X. Meng, “Mechanics of the folding of a nanotube,” Nanotechnology. 2018. link Times cited: 5 Abstract: Nanotubes fold due to the competition between their mechanic… read moreAbstract: Nanotubes fold due to the competition between their mechanical stability and van der Waals interactions. The caused dramatic morphology change promises exciting applications of nanotubes in responsive and reconfigurable nanodevices. To investigate the folding mechanism, a curvature-based finite-deformation theoretical model simultaneously considering both the folding of a nanotube and the possible collapsing of the cross-section is developed. The predicted critical condition and the profiles in both axial and transverse directions agree well with molecular dynamics (MD) solutions, demonstrating that the cross-sectional deformation should be taken into account when investigating the folding of a nanotube with a large diameter. Moreover, simple scaling laws of the critical conditions are proposed through a small-deformation theoretical model. With these scaling laws, one can easily and quickly determine both the collapsing state of the cross-section and the folding state of the nanotube with only geometrical parameters L total , D , t and n rather than the difficult-to-determine material properties E I and γ . read less NOT USED (high confidence) N. C. Briggs et al., “A Roadmap for Electronic Grade 2-Dimensional Materials,” arXiv: Materials Science. 2018. link Times cited: 4 Abstract: Two dimensional (2D) materials continue to hold great promis… read moreAbstract: Two dimensional (2D) materials continue to hold great promise for future electronics, due to their atomic-scale thicknesses and wide range of tunable properties. However, commercial efforts in this field are relatively recent, and much progress is required to fully realize 2D materials for commercial success. Here, we present a roadmap for the realization of electronic-grade 2D materials. We discuss technology drivers, along with key aspects of synthesis and materials engineering required for development of these materials. Additionally, we highlight several fundamental milestones required for realization of electronic-grade 2D materials, and intend this article to serve as a guide for researchers in the field. read less NOT USED (high confidence) A. F. Fonseca and D. Galvão, “Self-tearing and self-peeling of folded graphene nanoribbons,” Carbon. 2018. link Times cited: 7 NOT USED (high confidence) R. Izadi, A. Nayebi, and E. Ghavanloo, “Molecular dynamics simulations of structural instability of fullerene family under tension force,” Molecular Simulation. 2018. link Times cited: 3 Abstract: ABSTRACT Fullerene molecules are cage-like nanoscopic struct… read moreAbstract: ABSTRACT Fullerene molecules are cage-like nanoscopic structures with pentagonal and hexagonal faces. In practical applications such as fullerene-reinforced nanocomposites (FRNCs), these structures may be subjected to tension force. In this research, we employ molecular dynamics (MD) simulation to compute the behaviour and deformation of different fullerene molecules, ranging from C60 to C2000, under tension force. To model the interactions between carbon atoms in the MD simulations, the adaptive intermolecular reactive bond order (AIREBO) force field is used. The displacement–force and the displacement–strain energy curves are obtained. It is observed that a new type of structural instability occurs in the fullerene molecules when the applied tension force increases. This abnormal structural instability in the fullerenes is investigated for the first time in the literature. The critical tensile forces and the corresponding mode shapes are determined for different fullerenes. The results indicate that the critical forces and deformations strongly depend upon the number of carbon atoms. read less NOT USED (high confidence) C. Falvo, A. Gamboa-Suárez, S. Cazayus-Claverie, P. Parneix, and F. Calvo, “Isomerization kinetics of flexible molecules in the gas phase: Atomistic versus coarse-grained sampling.,” The Journal of chemical physics. 2018. link Times cited: 0 Abstract: Isomerization kinetics of molecules in the gas phase natural… read moreAbstract: Isomerization kinetics of molecules in the gas phase naturally falls on the microcanonical ensemble of statistical mechanics, which for small systems might significantly differ from the more traditional canonical ensemble. In this work, we explore the examples of cis-trans isomerization in butane and bibenzyl and to what extent the fully atomistic rate constants in isolated molecules can be reproduced by coarse-graining the system into a lower dimensional potential of mean force (PMF) along a reaction coordinate of interest, the orthogonal degrees of freedom acting as a canonical bath in a Langevin description. Time independent microcanonical rate constants can be properly defined from appropriate state residence time correlation functions; however, the resulting rate constants acquire some time dependence upon canonical averaging of initial conditions. Stationary rate constants are recovered once the molecule is placed into a real condensed environment pertaining to the canonical ensemble. The effective one-dimensional kinetics along the PMF, based on appropriately chosen inertia and damping parameters, quantitatively reproduces the atomistic rate constants at short times but deviates systematically over long times owing to the neglect of some couplings between the system and the bath that are all intrinsically present in the atomistic treatment. In bibenzyl, where stronger temperature effects are noted than in butane, the effective Langevin dynamics along the PMF still performs well at short times, indicating the potential interest of this extremely simplified approach for sampling high-dimensional energy surfaces and evaluating reaction rate constants. read less NOT USED (high confidence) A. S. Sinitsa, I. Lebedeva, A. Popov, and A. Knizhnik, “Long triple carbon chains formation by heat treatment of graphene nanoribbon: Molecular dynamics study with revised Brenner potential,” Carbon. 2018. link Times cited: 13 NOT USED (high confidence) M. Wen, S. Carr, S. Fang, E. Kaxiras, and E. Tadmor, “Dihedral-angle-corrected registry-dependent interlayer potential for multilayer graphene structures,” Physical Review B. 2018. link Times cited: 39 Abstract: The structural relaxation of multilayer graphene is essentia… read moreAbstract: The structural relaxation of multilayer graphene is essential in describing the interesting electronic properties induced by intentional misalignment of successive layers, including the recently reported superconductivity in twisted bilayer graphene. This is difficult to accomplish without an accurate interatomic potential. Here, we present a new, registry-dependent Kolmogorov-Crespi type interatomic potential to model interlayer interactions in multilayer graphene structures. It consists of two parts representing attractive interaction due to dispersion, and repulsive interaction due to anisotropic overlap of electronic orbitals. An important new feature is a dihedral-angle-dependent term that is added to the repulsive part in order to describe correctly several distinct stacking states that the original Kolmogorov-Crespi potential cannot distinguish. We refer to the new model as the Dihedral-angle-corrected Registry-dependent Interlayer Potential (DRIP). Computations for several test problems show that DRIP correctly reproduces the binding, sliding, and twisting energies and forces obtained from ab initio total-energy calculations based on density functional theory. We use the new potential to study the structural properties of a twisted graphene bilayer and the exfoliation of graphene from graphite. Our potential is available through the OpenKIM interatomic potential repository at https://openkim.org. read less NOT USED (high confidence) V. Kapil et al., “i-PI 2.0: A universal force engine for advanced molecular simulations,” Comput. Phys. Commun. 2018. link Times cited: 221 NOT USED (high confidence) F. H. Isikgor et al., “Self-assembled atomically thin hybrid conjugated polymer perovskites with two-dimensional structure,” Journal of Materials Chemistry C. 2018. link Times cited: 3 Abstract: We show that self-assembly of protonated polymer chains and … read moreAbstract: We show that self-assembly of protonated polymer chains and metal halide network gives rise to formation of two-dimensional (2D) hybrid perovskites, which incorporate protonated polyaniline as the conjugated organic cation component and PbI6 octahedra as the inorganic component. Single- and few-unit-cell-thick layers of these perovskites are obtained by mechanical exfoliation. Owing to the semiconducting behaviour of conjugated compounds, the atomically thin hybrid conjugated polymer perovskites reported here are expected to be considerably different from the quantum well systems based on unconjugated organic cation incorporating hybrid perovskites, in which the insulating organic layers act as potential barriers and the semiconducting inorganic layers act as potential wells. Besides, these materials are highly flexible in terms of chemical composition unlike conventional inorganic 2D materials, such as graphene, transition metal chalcogenides, transition metal oxides, boron nitride and black phosphorus. Different functional polymers/macromolecules could be self-assembled with a metal halide network in the same manner for the design of novel 2D hybrid perovskites for target applications. We also demonstrate that the conjugated polymer perovskites have tunable optical band gaps and they are highly stable against humidity. read less NOT USED (high confidence) G. P. P. Pun, R. Batra, R. Ramprasad, and Y. Mishin, “Physically informed artificial neural networks for atomistic modeling of materials,” Nature Communications. 2018. link Times cited: 188 NOT USED (high confidence) J. Zhang, “Piezoelectrically tunable resonance properties of boron nitride nanotube based resonators,” Journal of Applied Physics. 2018. link Times cited: 3 Abstract: Resonance properties such as the resonance frequency, the se… read moreAbstract: Resonance properties such as the resonance frequency, the sensitivity, and the intrinsic dissipation of boron nitride nanotube (BNNT) based resonators are investigated in this work based on molecular dynamics simulations together with density functional theory calculations. A remarkable resonance property comparable to their carbon nanotube (CNT) counterparts is found in the present BNNT based resonators. Moreover, due to the unique piezoelectric characteristic of BNNTs, the resonance properties of BNNT based resonators can be efficiently tailored by external electric fields. It is found that when a negative electric field is applied, the resonance frequency and the sensitivity of BNNT based resonators can be significantly enhanced. This effect is attributed to the fact that due to the inverse piezoelectric response the applied negative electric field will induce a residual tensile stress in BNNTs and thus enhance their equivalent stiffness. Meanwhile, it is also found that the intrinsic dissipation of BNNT based resonators can be mitigated by a positive external electric field, since under this condition the thermoelastic dissipation and the phonon-phonon scattering of BNNTs are both reduced by the piezoelectric effect. Such unique piezoelectrically tunable resonance properties in BNNT based resonators render them have a broader spectrum of applications than their conventional CNT counterparts.Resonance properties such as the resonance frequency, the sensitivity, and the intrinsic dissipation of boron nitride nanotube (BNNT) based resonators are investigated in this work based on molecular dynamics simulations together with density functional theory calculations. A remarkable resonance property comparable to their carbon nanotube (CNT) counterparts is found in the present BNNT based resonators. Moreover, due to the unique piezoelectric characteristic of BNNTs, the resonance properties of BNNT based resonators can be efficiently tailored by external electric fields. It is found that when a negative electric field is applied, the resonance frequency and the sensitivity of BNNT based resonators can be significantly enhanced. This effect is attributed to the fact that due to the inverse piezoelectric response the applied negative electric field will induce a residual tensile stress in BNNTs and thus enhance their equivalent stiffness. Meanwhile, it is also found that the intrinsic dissipation of BN... read less NOT USED (high confidence) X. Hu, W. A. Nanney, K. Umeda, T. Ye, and A. Martini, “Combined Experimental and Simulation Study of Amplitude Modulation Atomic Force Microscopy Measurements of Self-Assembled Monolayers in Water.,” Langmuir : the ACS journal of surfaces and colloids. 2018. link Times cited: 13 Abstract: Atomic force microscopy (AFM) can be used to measure surface… read moreAbstract: Atomic force microscopy (AFM) can be used to measure surface properties at the nanoscale. However, interpretation of measurements from amplitude modulation AFM (AM-AFM) in liquid is not straightforward due to the interactions between the AFM tip, the surface being imaged, and the water. In this work, amplitude-distance measurements and molecular dynamics simulations of AM-AFM were employed to study the effect of surface chemistry on the amplitude of tip oscillation in water. The sample surfaces consisted of self-assembled monolayers where the hydrophilicity or hydrophobicity was determined by the terminal group of the alkanethiols. Analysis showed that surface chemical composition influences the hydration structure near the interface which affects the forces experienced by the tip and in turn changes the amplitude profile. This observation could aid our understanding of AM-AFM measurements of interfacial phenomena on various surfaces in water. read less NOT USED (high confidence) C. Guedj, L. Jaillet, F. Rousse, and S. Redon, “Atomistic Modelling and Simulation of Transmission Electron Microscopy Images: Application to Intrinsic Defects of Graphene,” International Conference on Simulation and Modeling Methodologies, Technologies and Applications. 2018. link Times cited: 1 Abstract: The characterization of advanced materials and devices in th… read moreAbstract: The characterization of advanced materials and devices in the nanometer range requires complex tools to understand the precise links between structure and properties. This paper demonstrates that the modelling of graphene-based defects can be obtained efficiently for various atomic arrangements using the Brenner module of the SAMSON software platform. The signatures of all kinds of defects are computed in terms of energy and simulated scanning transmission electron microscopy images. The results are in good agreement with the majority of the available theoretical and experimental data. This original methodology is an excellent compromise between the speed and the precision required by the semiconductor industry and opens the possibility of realistic in-silico research conjugated to the experimental nanocharacterization of these promising materials. We propose a novel approach to compare the agreement between experiment and simulation by using the projected radial distribution function. The maximum projected Euclidian distance between the model and the experiment is always better than 100 pm. read less NOT USED (high confidence) A. Giri and P. Hopkins, “Giant reduction and tunability of the thermal conductivity of carbon nanotubes through low-frequency resonant modes,” Physical Review B. 2018. link Times cited: 13 Abstract: Manipulating thermal transport by designing materials with c… read moreAbstract: Manipulating thermal transport by designing materials with control of their properties over the entire spectral range of vibrational frequencies would provide a unique path to create solids with designer thermal conductivities. Traditional routes of nanostructuring to reduce the vibrational thermal conductivity of solids typically target narrow bands of the vibrational energy spectrum, which is often based on the characteristic dimensions of the nanostructure. In this work, we demonstrate the ability to simultaneously impact the phonon transport of both highand low-frequency modes by creating defects that act as both high-frequency phonon scattering sites while coherently manipulating low-frequency waves via resonance with the long wavelength phonons. We use atomistic simulations to identify fullerenes functionalized on the sidewalls of carbon nanotubes (CNT) as efficient phonon blocks realized through localized resonances that appear due to hybridization between the modes of the fullerene and the underlying CNT. We show that with a large surface coverage and high periodicity in the inclusion of the covalently bonded fullerenes, the thermal conductivity of individual CNTs can be lowered by more than an order of magnitude, thus providing a large tunability in the thermal transport across these materials. We prescribe the large reduction in thermal conductivity to a combination of resonant phonon localization effects leading to phonon band anticrossings and vibrational scattering effects due to the inclusion of the strongly bonded fullerene molecules. read less NOT USED (high confidence) A. Vashisth, C. M. Ashraf, W. Zhang, C. Bakis, and A. V. van Duin, “Accelerated ReaxFF Simulations for Describing the Reactive Cross-Linking of Polymers.,” The journal of physical chemistry. A. 2018. link Times cited: 81 Abstract: Various methods have been developed to perform atomistic-sca… read moreAbstract: Various methods have been developed to perform atomistic-scale simulations for the cross-linking of polymers. Most of these methods involve connecting the reactive sites of the monomers, but these typically do not capture the entire reaction process from the reactants to final products through transition states. Experimental time scales for cross-linking reactions in polymers range from minutes to hours, which are time scales that are inaccessible to atomistic-scale simulations. Because simulating reactions on realistic time scales is computationally expensive, in this investigation, an accelerated simulation method was developed within the ReaxFF reactive force field framework. In this method, the reactants are tracked until they reach a nonreactive configuration that provides a good starting point for a reactive event. Subsequently, the reactants are provided with a sufficient amount of energy-equivalent or slightly larger than their lowest-energy reaction barrier-to overcome the barrier for the cross-linking process and form desired products. This allows simulation of cross-linking at realistic, low temperatures, which helps to mimic chemical reactions and avoids unwanted high-temperature side reactions and still allows us to reject high-barrier events. It should be noted that not all accelerated events are successful as high local strain can lead to reaction rejections. The validity of the ReaxFF force field was tested for three different types of transition state, possibly for polymerization of epoxides, and good agreement with quantum mechanical methods was observed. The accelerated method was further implemented to study the cross-linking of diglycidyl ether of bisphenol F (bis F) and diethyltoluenediamine (DETDA), and a reasonably high percentage (82%) of cross-linking was obtained. The simulated cross-linked polymer was then tested for density, glass transition temperature, and modulus and found to be in good agreement with experiments. Results indicate that this newly developed accelerated simulation method in ReaxFF can be a useful tool to perform atomistic-scale simulations on polymerization processes that have a relatively high reaction barrier at a realistic, low temperature. read less NOT USED (high confidence) J. Petucci, S. Semone, C. LeBlond, M. Karimi, and G. Vidali, “Formation of H2 on graphene using Eley-Rideal and Langmuir-Hinshelwood processes.,” The Journal of chemical physics. 2018. link Times cited: 6 Abstract: A hydrogen atom can either physisorb or chemisorb onto a gra… read moreAbstract: A hydrogen atom can either physisorb or chemisorb onto a graphene surface. To describe the interaction of H with graphene, we trained the C-C, H-H, and C-H interactions of the ReaxFF CHO bond order potential to reproduce Density Functional Theory (DFT) generated values of graphene cohesive energy and lattice constant, H2 dissociation energy, H on graphene adsorption potentials, and H2 formation on graphene using the Eley-Rideal (ER) and Langmuir-Hinshelwood (LH) processes. The results, generated from the trained H-graphene potentials, are in close agreement with the corresponding results from DFT. The advantage of using optimized CH potentials is, for example, the inclusion of physisorption interactions and quantum mechanical features of chemical bonding in the functional forms of the potentials. The trained CH potentials are utilized to study the energetics of formation of an H2 molecule on graphene using the Eley-Rideal and Langmuir-Hinshelwood processes. Potential energy surfaces for the formation of H2 through ER are generated for the collinear and oblique approach of the second hydrogen atom. Energetics of the formation of H2 through LH is studied for a variety of cases such as when hydrogen atoms are chemisorbed or physisorbed and when hydrogen occupies ortho, meta, or para chemisorption sites. The likelihood of H2 formation through LH for various configurations is discussed. Furthermore, the tunneling probability of an atom through a continuous symmetric/asymmetric barrier is calculated and applied to an adsorbed hydrogen atom on graphene. read less NOT USED (high confidence) A. Simon et al., “Dissociation of polycyclic aromatic hydrocarbons at high energy: MD/DFTB simulations versus collision experiments,” Theoretical Chemistry Accounts. 2018. link Times cited: 12 NOT USED (high confidence) J. Baimova and L. Rysaeva, “Deformation Behavior of Three-Dimensional Carbon Structures Under Hydrostatic Compression,” Journal of Structural Chemistry. 2018. link Times cited: 7 NOT USED (high confidence) N. Andric and P. Jenny, “Molecular dynamics investigation of energy transfer during gas-surface collisions,” Physics of Fluids. 2018. link Times cited: 13 Abstract: In this work, the energy transfer in gas-surface collisions … read moreAbstract: In this work, the energy transfer in gas-surface collisions is investigated using the molecular dynamics method. The numerical setup consists of a nitrogen molecule scattering from a graphite surface. The main focus is put on the energy redistribution between different molecular kinetic modes and the surface for the case of strong thermal non-equilibrium. The thermal non-equilibrium is defined as the state when either translational or rotational temperature of impinging molecules differs significantly from that of the surface. Accordingly, two different scenarios have been examined, including rotational and translational excitation of the initial molecular state. In contrast to the molecular beam method, the initial molecular velocities are sampled from the equilibrium Maxwellian distribution, ensuring isotropic incidence angles and energies. The obtained results are expressed in the form of energy transfer coefficients, which are used to quantify the normalized energy loss or gain in a specific mode. Furthermore, the velocity distributions of reflected molecules are analyzed and compared with some of the available wall kernels, providing further insight into the nature of the energy transfer dynamics and scattering process. Additionally, the numerical setup is tested against the available molecular beam experimental data and the obtained results were used to select a suitable numerical force field.In this work, the energy transfer in gas-surface collisions is investigated using the molecular dynamics method. The numerical setup consists of a nitrogen molecule scattering from a graphite surface. The main focus is put on the energy redistribution between different molecular kinetic modes and the surface for the case of strong thermal non-equilibrium. The thermal non-equilibrium is defined as the state when either translational or rotational temperature of impinging molecules differs significantly from that of the surface. Accordingly, two different scenarios have been examined, including rotational and translational excitation of the initial molecular state. In contrast to the molecular beam method, the initial molecular velocities are sampled from the equilibrium Maxwellian distribution, ensuring isotropic incidence angles and energies. The obtained results are expressed in the form of energy transfer coefficients, which are used to quantify the normalized energy loss or gain in a specific mode. Fur... read less NOT USED (high confidence) X. Zhou, X. Liu, F. Sansoz, and M. Shen, “Molecular dynamics simulation on temperature and stain rate-dependent tensile response and failure behavior of Ni-coated CNT/Mg composites,” Applied Physics A. 2018. link Times cited: 13 NOT USED (high confidence) C. Zhu, Y. Chen, R. Liu, and J. Zhao, “Buckling behaviors of single-walled carbon nanotubes inserted with a linear carbon-atom chain,” Nanotechnology. 2018. link Times cited: 10 Abstract: Buckling behaviors of single-walled carbon nanotubes (SWCNTs… read moreAbstract: Buckling behaviors of single-walled carbon nanotubes (SWCNTs) inserted with a linear carbon-atom chain (CAC) (the composite structures are also called carbon nanowires (CNWs)) under torsion and bending as well as compression are studied using molecular dynamics (MD) simulations, respectively. Our MD results show that the critical buckling angles (or strains) of CNWs under the three presented kinds of loading patterns can be two times those of corresponding independent SWCNTs for long CNWs, while the buckling improvement is not obvious for short ones. The main reason is that the radial van der Waals force between the CAC and the SWCNT is very small for a short CNW, while it increases with increasing length and then tends to a constant for a long CNW. The obtained MD results agree well with those from available theoretical models. These findings will be a great help towards understanding the stability and reliability of the special CNT structures, and designing flexible CNT-based devices. read less NOT USED (high confidence) E. Y. Ang et al., “Effects of CNT size on the desalination performance of an outer-wall CNT slit membrane.,” Physical chemistry chemical physics : PCCP. 2018. link Times cited: 14 Abstract: We investigate the effect of varying carbon nanotube (CNT) s… read moreAbstract: We investigate the effect of varying carbon nanotube (CNT) size on the desalination performance through slit confinements formed by horizontally aligned CNTs stacked on top of one another. By increasing the CNT size, the results obtained from this study indicate a corresponding increase in the water flow rate, accompanied by a slight reduction in salt rejection performance. However, due to the increase in the membrane area with CNT size, the permeability performance is observed to reduce as the CNT size increases. Nevertheless, a comparison with nanoporous 2D membranes shows that the permeability of an outer-wall CNT slit membrane remains significantly higher for all CNT sizes considered. This indicates that precise dimensions of the CNTs are not highly crucial for achieving ultra-high permeability performance in such membranes, as long as the critical slit size is maintained. In-depth analytical studies were further conducted to correlate the influence of curvature effects due to increasing CNT size on the flow characteristcis of the outer-wall CNT membrane. These include the analysis of the measured velocity profiles, oxygen density mapping, potential of mean force profile and friction profile. The present numerical results demonstrate the superb desalination performance of the outer-wall CNT slit membrane, regardless of the size of CNTs used. In addition, an extensive analysis conducted provides detailed characterization of how the curvature affects flow across outer-wall CNTs, and can be used to guide future design and fabrication for experimental testing. read less NOT USED (high confidence) X. Qin, W. Yan, X. Guo, and T. Gao, “Effects of area, aspect ratio and orientation of rectangular nanohole on the tensile strength of defective graphene – a molecular dynamics study,” RSC Advances. 2018. link Times cited: 12 Abstract: Molecular dynamics simulations with adaptive intermolecular … read moreAbstract: Molecular dynamics simulations with adaptive intermolecular reactive empirical bond order (AIREBO) potential are performed to investigate the effects of rectangular nanoholes with different areas, aspect ratios (length/width ratios) and orientations on the tensile strength of defective graphene. The simulations reveal that variation of area, aspect ratio and orientation of rectangular nanohole can significantly affect the tensile strength of defective graphene. For example, defective graphene with a larger area of rectangular nanohole shows a bigger drop in tensile strength. It was found that the tensile strength of both armchair and zigzag edged graphene monotonically decreases with area increases in rectangular nanohole. Changes in aspect ratio and orientation of rectangular nanohole, however, can either decrease or increase the tensile strength of defective graphene, dependent on the tensile direction. This study also presents information that the tensile strength of defective graphene with large area of nanohole is more sensitive to changes in aspect ratio and orientation than is defective graphene with small area of nanohole. Interestingly, variation of tensile strength of defective graphene from MD simulations is in good agreement with predictions from energy-based quantized fracture mechanics (QFM). The present results suggest that the effect of nanoholes on the tensile strength of graphene provides essential information for predictive optimization of mechanical properties and controllable structural modification of graphene through defect engineering. read less NOT USED (high confidence) A. Verma, A. Parashar, and M. Packirisamy, “Atomistic modeling of graphene/hexagonal boron nitride polymer nanocomposites: a review,” Wiley Interdisciplinary Reviews: Computational Molecular Science. 2018. link Times cited: 80 Abstract: Due to their exceptional properties, graphene and hexagonal … read moreAbstract: Due to their exceptional properties, graphene and hexagonal boron nitride (h‐BN) nanofillers are emerging as potential candidates for reinforcing the polymer‐based nanocomposites. Graphene and h‐BN have comparable mechanical and thermal properties, whereas due to high band gap in h‐BN (~5 eV), have contrasting electrical conductivities. Atomistic modeling techniques are viable alternatives to the costly and time‐consuming experimental techniques, and are accurate enough to predict the mechanical properties, fracture toughness, and thermal conductivities of graphene and h‐BN‐based nanocomposites. Success of any atomistic model entirely depends on the type of interatomic potential used in simulations. This review article encompasses different types of interatomic potentials that can be used for the modeling of graphene, h‐BN, and corresponding nanocomposites, and further elaborates on developments and challenges associated with the classical mechanics‐based approach along with synergic effects of these nano reinforcements on host polymer matrix. read less NOT USED (high confidence) A. Galashev, O. Rakhmanova, and L. Elshina, “Molecular Dynamics Study of the Formation of Solid Al–C Nanocomposites,” Russian Journal of Physical Chemistry B. 2018. link Times cited: 5 NOT USED (high confidence) N. Filla, R. Ramasamy, and X. Wang, “Forces, energetics, and dynamics of conjugated-carbon ring tethers adhered to CNTs: a computational investigation.,” Physical chemistry chemical physics : PCCP. 2018. link Times cited: 2 Abstract: The strength and nature of the interactions between carbon n… read moreAbstract: The strength and nature of the interactions between carbon nanotubes (CNTs) and molecular tethers plays a vital role in technology such as CNT-enzyme sensors. Tethers that attach noncovalently to CNTs are ideal for retaining the electrical properties of the CNTs since they do not degrade the CNT surface and effect its electrical conductivity. However, leaching due to weak CNT-tether attachment is very common when using noncovalent tethers, and this has limited their use in commercial products including biosensors. Thus, understanding the fundamental mechanics governing the strength of CNT-tether adhesion is crucial for the design of highly sensitive, viable sensors. Here, we computationally investigate the adhesion strength of CNT-tether complexes with 8 different tethering molecules designed to adhere noncovalently to the CNT surface. We study the effects of CNT diameter, CNT chirality, and the size/geometry of the tethering molecule on the adhesion energy and force. Our results show an asymptotic relationship between adhesion strength and CNT diameter. Calculations show that noncovalent tethers tested here can reach adhesion forces and energies that are up to 21% and 54% of the strength of the carbon-carbon single bond force and bond energy respectively. We anticipate our results will help guide CNT-enzyme sensor design to produce sensors with high sensitivity and minimal leaching. read less NOT USED (high confidence) J. Zhang, “A nonlocal continuum model for the buckling of carbon honeycombs,” Meccanica. 2018. link Times cited: 0 NOT USED (high confidence) J. Yeo et al., “Materials-by-design: computation, synthesis, and characterization from atoms to structures,” Physica Scripta. 2018. link Times cited: 36 Abstract: In the 50 years that succeeded Richard Feynman’s exposition … read moreAbstract: In the 50 years that succeeded Richard Feynman’s exposition of the idea that there is ‘plenty of room at the bottom’ for manipulating individual atoms for the synthesis and manufacturing processing of materials, the materials-by-design paradigm is being developed gradually through synergistic integration of experimental material synthesis and characterization with predictive computational modeling and optimization. This paper reviews how this paradigm creates the possibility to develop materials according to specific, rational designs from the molecular to the macroscopic scale. We discuss promising techniques in experimental small-scale material synthesis and large-scale fabrication methods to manipulate atomistic or macroscale structures, which can be designed by computational modeling. These include recombinant protein technology to produce peptides and proteins with tailored sequences encoded by recombinant DNA, self-assembly processes induced by conformational transition of proteins, additive manufacturing for designing complex structures, and qualitative and quantitative characterization of materials at different length scales. We describe important material characterization techniques using numerous methods of spectroscopy and microscopy. We detail numerous multi-scale computational modeling techniques that complements these experimental techniques: DFT at the atomistic scale; fully atomistic and coarse-grain molecular dynamics at the molecular to mesoscale; continuum modeling at the macroscale. Additionally, we present case studies that utilize experimental and computational approaches in an integrated manner to broaden our understanding of the properties of two-dimensional materials and materials based on silk and silk-elastin-like proteins. read less NOT USED (high confidence) A. Bourque and G. Rutledge, “Empirical potential for molecular simulation of graphene nanoplatelets.,” The Journal of chemical physics. 2018. link Times cited: 8 Abstract: A new empirical potential for layered graphitic materials is… read moreAbstract: A new empirical potential for layered graphitic materials is reported. Interatomic interactions within a single graphene sheet are modeled using a Stillinger-Weber potential. Interatomic interactions between atoms in different sheets of graphene in the nanoplatelet are modeled using a Lennard-Jones interaction potential. The potential is validated by comparing molecular dynamics simulations of tensile deformation with the reported elastic constants for graphite. The graphite is found to fracture into graphene nanoplatelets when subjected to ∼15% tensile strain normal to the basal surface of the graphene stack, with an ultimate stress of 2.0 GPa and toughness of 0.33 GPa. This force field is useful to model molecular interactions in an important class of composite systems comprising 2D materials like graphene and multi-layer graphene nanoplatelets. read less NOT USED (high confidence) L. Wang, J. Jin, J. Cao, P. Yang, and Q. Peng, “Interaction of Edge Dislocations with Graphene Nanosheets in Graphene/Fe Composites.” 2018. link Times cited: 24 Abstract: Graphene is an ideal reinforcement material for metal-matrix… read moreAbstract: Graphene is an ideal reinforcement material for metal-matrix composites owing to its exceptional mechanical properties. However, as a 2D layered material, graphene shows highly anisotropic behavior, which greatly affects the mechanical properties of graphene-based composites. In this study, the interaction between an edge dislocation (b = 1/2 (111)) and a pair of graphene nanosheets (GNSs) in GNS reinforced iron matrix composite (GNS/Fe) was investigated using molecular dynamic simulations under simple shearing conditions. We studied the cases wherein the GNS pair was parallel to the (1 1 ¯ 0), (11 2 ¯ ), and (111) planes, respectively. The results showed that the GNS reinforcement can effectively hinder dislocation motion, which improves the yield strength. The interaction between the edge dislocation and the GNS pair parallel to the (11 2 ¯ ) plane showed the strongest effect of blocking dislocations among the three cases, resulting in increases in the shear modulus and yield stress of 107% and 1400%, respectively. This remarkable enhancement was attributed to the Orowan “by-passing” strengthening mechanism, whereas cross-slip of dislocation segments was observed during looping around GNSs. Our results might contribute to the development of high-strength iron matrix composites. read less NOT USED (high confidence) B. K. Wittmaack, A. H. Banna, A. Volkov, and L. Zhigilei, “Mesoscopic modeling of structural self-organization of carbon nanotubes into vertically aligned networks of nanotube bundles,” Carbon. 2018. link Times cited: 15 NOT USED (high confidence) J. Silveira, R. A. Pagnussati, J. Kleinpaul, R. Paupitz, and A. Muniz, “Nanoporous carbon superstructures based on covalent bonding of porous fullerenes,” Carbon. 2018. link Times cited: 10 NOT USED (high confidence) X. Xu, J. Chen, J. Zhou, and B. Li, “Thermal Conductivity of Polymers and Their Nanocomposites,” Advanced Materials. 2018. link Times cited: 413 Abstract: Polymers are usually considered as thermal insulators, and t… read moreAbstract: Polymers are usually considered as thermal insulators, and their applications are limited by their low thermal conductivity. However, recent studies have shown that certain polymers have surprisingly high thermal conductivity, some of which are comparable to that in poor metals or even silicon. Here, the experimental achievements and theoretical progress of thermal transport in polymers and their nanocomposites are outlined. The open questions and challenges of existing theories are discussed. Special attention is given to the mechanism of thermal transport, the enhancement of thermal conductivity in polymer nanocomposites/fibers, and their potential application as thermal interface materials. read less NOT USED (high confidence) B. Javvaji, B. He, and X. Zhuang, “The generation of piezoelectricity and flexoelectricity in graphene by breaking the materials symmetries,” Nanotechnology. 2018. link Times cited: 39 Abstract: Graphene is a non-piezoelectric material. Engineering the pi… read moreAbstract: Graphene is a non-piezoelectric material. Engineering the piezoelectricity in graphene is possible with the help of impurities, defects and structural modifications. This study reports the mechanism of strain induced polarization and the estimation of piezoelectric and flexoelectric coefficients for graphene system. The combination of charge-dipole potential and the strong many-body potential is employed for describing the inter-atomic interactions. The breaking of symmetry in graphene material is utilized to generate the polarization. Pristine graphene, graphene with circular defect, graphene with triangular defect and trapezium-shaped graphene are considered. Molecular dynamics simulations are performed for straining the graphene atomic systems. The optimization of charge-dipole potential functions measure the polarization for these systems. Pristine and circular defect graphene systems show a constant polarization with strain. The polarization is varying with strain for a triangular defected and trapezium-shaped graphene system. The local atomic deformation produces a change in polarization with respect to the strain gradient. Estimated piezo and flexo coefficients motivate the usage of graphene in electro-mechanical devices. read less NOT USED (high confidence) H. Zhan, G. Zhang, C. Yang, and Y. T. Gu, “Graphene Helicoid: Distinct Properties Promote Application of Graphene Related Materials in Thermal Management,” Journal of Physical Chemistry C. 2018. link Times cited: 22 Abstract: The extremely high thermal conductivity of graphene has rece… read moreAbstract: The extremely high thermal conductivity of graphene has received great attention both in experiments and calculations. Obviously, new features in thermal properties are of primary importance for application of graphene-based materials in thermal management in nanoscale. Here, we studied the thermal conductivity of graphene helicoid, a newly reported graphene-related nanostructure, using molecular dynamics simulation. Interestingly, in contrast to the converged cross-plane thermal conductivity in multilayer graphene, axial thermal conductivity of graphene helicoid keeps increasing with thickness with a power law scaling relationship, which is a consequence of the divergent in-plane thermal conductivity of two-dimensional graphene. Moreover, the large overlap between adjacent layers in graphene helicoid also promotes higher thermal conductivity than multilayer graphene. Furthermore, in the small strain regime (<10%), compressive strain can effectively increase the thermal conductivity of graphene helicoid, ... read less NOT USED (high confidence) H. Zhan and Y. T. Gu, “Thermal Conductivity of Diamond Nanothread,” arXiv: Materials Science. 2018. link Times cited: 2 NOT USED (high confidence) X. Liu, J. Cai, and S. Luo, “Interfacial anti-fatigue effect in graphene-copper nanolayered composites under cyclic shear loading.,” Physical chemistry chemical physics : PCCP. 2018. link Times cited: 13 Abstract: Low-cycle fatigue behaviors of graphene-copper nanolayered (… read moreAbstract: Low-cycle fatigue behaviors of graphene-copper nanolayered (GCuNL) composites are explored at different interface configurations and repeat layer spacings. The graphene interfaces can trap dislocations through impeding the propagation of dislocations in copper layers, giving rise to the absence of softening, and an increase in the fatigue strength of GCuNL composites (up to 400% that of pure copper). This anti-fatigue effect is independent of the crystal orientation of copper or the chirality of graphene due to interfacial constraints and can be controlled by tailoring the repeat layer spacing. Low repeat layer spacing increases the instability and nonlinearity of the composites, while high repeat layer spacing decreases the anti-fatigue effect. The optimum value of the repeat layer spacing for the GCuNL composites is 3-7 nm, in order to achieve a balanced anti-fatigue capability and interface stability. read less NOT USED (high confidence) G. Lei, Y. Zhang, H. Liu, and F. Song, “Mechanical properties of hollow and water-filled graphyne nanotube and carbon nanotube hybrid structure,” Nanotechnology. 2018. link Times cited: 8 Abstract: By performing molecular dynamics simulations, a GNT/CNT hybr… read moreAbstract: By performing molecular dynamics simulations, a GNT/CNT hybrid structure constructed via combing (6, 6) graphyne nanotube (GNT) with (6, 6) carbon nanotube (CNT) has been designed and investigated. The mechanical properties induced by the percentage of GNT, water content and electric field were examined. Calculation results reveal that the fracture strain and strength of hollow hybrid structure are remarkably smaller than that of perfect (6, 6) CNT. In addition, the Young’s modulus decreases monotonously with the increase of percentage of GNT. More importantly, the tunable mechanical properties of hybrid structure can be achieved through filling with water molecules and applying an electric field along tensile direction. Specifically, increasing water content from 0.0 to 8.70 mmol g−1 in the absence of electric field could result in fracture strain and strength reducing by 15.09% and 12.87%, respectively. Besides, enhancing fracture strain and strength of water-filled hybrid structure with water content of 8.70 mmol g−1 can also be obtained with rising electric field intensity. These findings would provide a valuable theoretical basis for designing and fabricating a nanodevice with controllable mechanical performances. read less NOT USED (high confidence) R. B. Hudson and A. Sinha, “Vibration of carbon nanotubes with defects: order reduction methods,” Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences. 2018. link Times cited: 3 Abstract: Order reduction methods are widely used to reduce computatio… read moreAbstract: Order reduction methods are widely used to reduce computational effort when calculating the impact of defects on the vibrational properties of nearly periodic structures in engineering applications, such as a gas-turbine bladed disc. However, despite obvious similarities these techniques have not yet been adapted for use in analysing atomic structures with inevitable defects. Two order reduction techniques, modal domain analysis and modified modal domain analysis, are successfully used in this paper to examine the changes in vibrational frequencies, mode shapes and mode localization caused by defects in carbon nanotubes. The defects considered are isotope defects and Stone–Wales defects, though the methods described can be extended to other defects. read less NOT USED (high confidence) E. Ghavanloo, R. Izadi, and A. Nayebi, “Computational modeling of the effective Young’s modulus values of fullerene molecules: a combined molecular dynamics simulation and continuum shell model,” Journal of Molecular Modeling. 2018. link Times cited: 10 NOT USED (high confidence) S. I. Kundalwal and V. Choyal, “Transversely isotropic elastic properties of carbon nanotubes containing vacancy defects using MD,” Acta Mechanica. 2018. link Times cited: 66 NOT USED (high confidence) S. I. Kundalwal and V. Choyal, “Transversely isotropic elastic properties of carbon nanotubes containing vacancy defects using MD,” Acta Mechanica. 2018. link Times cited: 0 NOT USED (high confidence) M. Z. Hossain, T. Hao, and B. Silverman, “Stillinger–Weber potential for elastic and fracture properties in graphene and carbon nanotubes,” Journal of Physics: Condensed Matter. 2018. link Times cited: 42 Abstract: This paper presents a new framework for determining the Stil… read moreAbstract: This paper presents a new framework for determining the Stillinger–Weber (SW) potential parameters for modeling fracture in graphene and carbon nanotubes. In addition to fitting the equilibrium material properties, the approach allows fitting the potential to the forcing behavior as well as the mechanical strength of the solid, without requiring ad hoc modification of the nearest-neighbor interactions for avoiding artificial stiffening of the lattice at larger deformation. Consistent with the first-principles results, the potential shows the Young’s modulus of graphene to be isotropic under symmetry-preserving and symmetry-breaking deformation conditions. It also shows the Young’s modulus of carbon nanotubes to be diameter-dependent under symmetry-breaking loading conditions. The potential addresses the key deficiency of existing empirical potentials in reproducing experimentally observed glass-like brittle fracture in graphene and carbon nanotubes. In simulating the entire deformation process leading to fracture, the SW-potential costs several factors less computational time compared to the state-of-the-art interatomic potentials that enables exploration of the fracture processes in large atomistic systems which are inaccessible otherwise. read less NOT USED (high confidence) P. Zhu and R. Li, “Study of Nanoscale Friction Behaviors of Graphene on Gold Substrates Using Molecular Dynamics,” Nanoscale Research Letters. 2018. link Times cited: 15 NOT USED (high confidence) K. Katin, V. Prudkovskiy, and M. Maslov, “Molecular dynamics simulation of nickel-coated graphene bending,” Micro & Nano Letters. 2018. link Times cited: 26 Abstract: The work presents a force field molecular dynamics study of … read moreAbstract: The work presents a force field molecular dynamics study of nickel-coated graphene sheet bending at temperatures 300 and 1300 K. Nickel film is represented by nickel atoms located above the centres of carbon hexagons. Parameters for carbon–nickel interaction are fitted with regard to the accurate density functional calculations. Unstrained or flat configuration of the nickel–graphene system is found to be energetically unfavourable for the considered temperatures. Two types of curvatures are taken into account. Positive curvature is characterised by the nickel atoms located closer to the bending axis than the carbon ones, and negative curvature corresponds to the reverse atomic positions. It is found that the equilibrium radius for the curved nickel–graphene complex with the negative curvature is less than the corresponding value for the positive one. However, in both cases the equilibrium curvature radius of nickel-coated graphene is of the order of several nanometres. It is shown that both temperature and bending directions (zigzag and armchair) weakly affect the bending energy and do not change the equilibrium radius. Bending behaviour of the system is defined by the carbon–nickel interaction rather than the individual properties of isolated graphene and nickel films. read less NOT USED (high confidence) X. Yang, S. Wu, J. Xu, B. Cao, and A. To, “Spurious heat conduction behavior of finite-size graphene nanoribbon under extreme uniaxial strain caused by the AIREBO potential,” Physica E-low-dimensional Systems & Nanostructures. 2018. link Times cited: 15 NOT USED (high confidence) V. Blank et al., “Pressure-Induced Transformation of Graphite and Diamond to Onions.” 2018. link Times cited: 21 Abstract: In this study, we present a number of experiments on the tra… read moreAbstract: In this study, we present a number of experiments on the transformation of graphite, diamond, and multiwalled carbon nanotubes under high pressure conditions. The analysis of our results testifies to the instability of diamond in the 55–115 GPa pressure range, at which onion-like structures are formed. The formation of interlayer sp3-bonds in carbon nanostructures with a decrease in their volume has been studied theoretically. It has been found that depending on the structure, the bonds between the layers can be preserved or broken during unloading. read less NOT USED (high confidence) S. Goel and A. Stukowski, “Comment on ‘Incipient plasticity of diamond during nanoindentation’ by C. Xu, C. Liu and H. Wang, RSC Advances, 2017, 7, 36093,” RSC Advances. 2018. link Times cited: 4 Abstract: A recent molecular dynamics simulation study on nanoindentat… read moreAbstract: A recent molecular dynamics simulation study on nanoindentation of diamond carried out by Xu et al.1 has reported observation of the presence of a controversial hexagonal lonsdaleite phase of carbon in the indentation area. In this comment, we question the reported observation and attribute this anomaly to shortcomings of the long range bond order potential (LCBOP) employed in the nanoindentation study. read less NOT USED (high confidence) X. Zhang, K. Cai, J. Shi, and Q. Qin, “Friction effect of stator in a multi-walled CNT-based rotation transmission system,” Nanotechnology. 2018. link Times cited: 7 Abstract: The rotation transmission system (RTS) made from co-axial mu… read moreAbstract: The rotation transmission system (RTS) made from co-axial multi-walled nanotubes (MWNTs) has the function of regulating the input rotation from a nanomotor. The mechanism for the regulation is that the friction among the tubes during rotation governs the rotation of the rotors in the nanosystem. By integrating a rotary nanomotor and a nanobearing into an MWNT-based RTS, it is discovered that the stator (outer tube) provides relatively greater friction on the rotors by penetrating the motor tube, which has a higher stable rotational frequency. And the output rotation of the rotors in the system depends significantly on the temperature of the system, as the rotor tubes are slightly longer than the motor tube. Briefly, at low temperatures, say 8 K, the rotors rotate synchronously with the motor. However, at high temperatures, the rotors rotate slower than the motor with a bigger difference between their rotational frequencies. Hence, the output rotational frequencies can be adjusted by changing the temperature as well as the input rotational frequency. read less NOT USED (high confidence) Y. Cheng et al., “Large diffusion anisotropy and orientation sorting of phosphorene nanoflakes under a temperature gradient.,” Nanoscale. 2018. link Times cited: 13 Abstract: We perform molecular dynamics simulations to investigate the… read moreAbstract: We perform molecular dynamics simulations to investigate the motion of phosphorene nanoflakes on a large graphene substrate under a thermal gradient. It is found that the atomic interaction between the graphene substrate and the phosphorene nanoflake generates distinct rates of motion for phosphorene nanoflakes with different orientations. Remarkably, for square phosphorene nanoflakes, the motion of zigzag-oriented nanoflakes is 2-fold faster than those of armchair-oriented and randomly-oriented nanoflakes. This large diffusion anisotropy suggests that sorting of phosphorene nanoflakes into specific orientations can be realized by a temperature gradient. The findings here provide interesting insights into strong molecular diffusion anisotropy and offer a novel route for manipulating two-dimensional materials. read less NOT USED (high confidence) Y. Hong, M. Ju, J. Zhang, and X. Zeng, “Phonon thermal transport in a graphene/MoSe2 van der Waals heterobilayer.,” Physical chemistry chemical physics : PCCP. 2018. link Times cited: 25 Abstract: Combining the best of different monolayers in one ultimate v… read moreAbstract: Combining the best of different monolayers in one ultimate van der Waals (vdW) heterostructure is an appealing approach for practical applications. Recently, a graphene (GR) and molybdenum diselenide (MoSe2) heterobilayer was successfully fabricated experimentally. The superior electrical conductivity of GR combined with the unique photoelectrical properties and direct bandgap of MoSe2 can yield many potential applications, such as Li-ion batteries, tunneling field effect transistors and two-dimensional non-volatile memory devices. Efficient heat conduction within the device components is of great importance for nanoelectronic performance. In this work, the cross-plane interfacial thermal resistance (R) and in-plane thermal conductivity (κ) of the GR/MoSe2 vdW heterobilayer are systematically investigated using classical molecular dynamics (MD) simulations. The predicted R at a temperature of 300 K is equal to 1.91 × 10-7 K m2 W-1. Effects of several modulators such as temperature, contact pressure and vacancy defects are evaluated, which are all found to have negative correlations with the calculated interfacial thermal resistance. The highest reduction of R amounts to 75% for doubled coupling strength between GR and MoSe2. Spectral energy density (SED) and phonon density of states (Ph-DOS) analyses are performed to gain further insights into the phonon properties of GR and MoSe2. Our study provides reasonable guidelines to increase heat dissipation efficiency for future GR/MoSe2 based applications. read less NOT USED (high confidence) A. Aghajamali, C. de Tomas, I. Suarez-Martinez, and N. Marks, “Unphysical nucleation of diamond in the extended cutoff Tersoff potential,” Molecular Simulation. 2018. link Times cited: 8 Abstract: In simulations of carbon materials it is common practice to … read moreAbstract: In simulations of carbon materials it is common practice to view the coefficients of the cutoff function as free parameters which can be optimised according to the system of interest. This work examines a common modification to the widely used Tersoff potential in which the coefficient of the upper cutoff is increased to improve the properties of amorphous carbon. Using molecular dynamics simulations, we show that this so-called extended cutoff Tersoff model leads to nucleation of diamond nanocrystals during annealing of amorphous carbon. By varying the density of the system, and examining the radial distribution function in conjunction with the modified cutoff function, we demonstrate that this behaviour is unphysical, and does not represent a new pathway for synthesising diamond. Viewed from a broader perspective, this observation provides a cautionary tale against altering the parameters of empirical potentials without fully considering the wider implications. read less NOT USED (high confidence) J. Li and H.-jun Shen, “Effects of fullerene coalescence on the thermal conductivity of carbon nanopeapods,” Molecular Physics. 2018. link Times cited: 8 Abstract: ABSTRACT The heat conduction and its dependence on fullerene… read moreAbstract: ABSTRACT The heat conduction and its dependence on fullerene coalescence in carbon nanopeapods (CNPs) have been investigated by equilibrium molecular dynamics simulations. The effects of fullerene coalescence on the thermal conductivity of CNPs were discussed under different temperatures. It is shown that the thermal conductivity of the CNPs decreases with the coalescence of encapsulated fullerene molecules. The thermal transmission mechanism of the effect of fullerene coalescence was analysed by the mass transfer contribution, the relative contributions of phonon oscillation frequencies to total heat current and the phonon vibrational density of states (VDOS). The mass transfer in CNPs is mainly attributed to the motion of encapsulated fullerene molecule and it gets more restricted with the coalescence of the fullerene. It shows that the low-frequency phonon modes below 20 THz contribute mostly to thermal conductivity in CNPs. The analysis of VDOS demonstrates that the dominating contribution to heat transfer is from the inner fullerene chain. With the coalescence of fullerene, the interfacial heat transfer between the CNT and fullerene chain is strengthened; however, the heat conduction of the fullerene chain decreases more rapidly at the same time. read less NOT USED (high confidence) S. Hu, W.-guo Sun, J. Fu, Z. Zhang, W. Wu, and Y. Tang, “Initiation mechanisms and kinetic analysis of the isothermal decomposition of poly(α-methylstyrene): a ReaxFF molecular dynamics study,” RSC Advances. 2018. link Times cited: 11 Abstract: This study investigates the thermal decomposition initiation… read moreAbstract: This study investigates the thermal decomposition initiation mechanisms and kinetics of poly(α-methylstyrene) (PαMS) under isothermal conditions, using molecular dynamics simulations with the ReaxFF reactive force field. The unimolecular pyrolysis simulations show that the thermal decomposition of the PαMS molecule is initiated mainly by carbon–carbon backbone cleavage in two types at random points along the main chain that leads to different intermediates, and is accompanied by depolymerization reactions that lead to the formation of the final products. The time evolution of typical species in the process of PαMS thermal decomposition at various temperatures presents specific evolution profiles and shows a temperature-dependence effect. Isothermal decomposition kinetic analysis based on PαMS pyrolysis shows that the activation energy varies with the degree of conversion during the thermal decomposition processes, which infers that the decomposition process at different conversions may have different reaction mechanisms. read less NOT USED (high confidence) H.-ming Ding and Y.-qiang Ma, “Computational approaches to cell-nanomaterial interactions: keeping balance between therapeutic efficiency and cytotoxicity.,” Nanoscale horizons. 2018. link Times cited: 32 Abstract: Owing to their unique properties, nanomaterials have been wi… read moreAbstract: Owing to their unique properties, nanomaterials have been widely used in biomedicine since they have obvious inherent advantages over traditional ones. However, nanomaterials may also cause dysfunction in proteins, genes and cells, resulting in cytotoxic and genotoxic responses. Recently, more and more attention has been paid to these potential toxicities of nanomaterials, especially to the risks of nanomaterials to human health and safety. Therefore, when using nanomaterials for biomedical applications, it is of great importance to keep the balance between therapeutic efficiency and cytotoxicity (i.e., increase the therapeutic efficiency as well as decrease the potential toxicity). This requires a deeper understanding of the interactions between various types of nanomaterials and biological systems at the nano/bio interface. In this review, from the point of view of theoretical researchers, we will present the current status regarding the physical mechanism of cytotoxicity caused by nanomaterials, mainly based on recent simulation results. In addition, the strategies for minimizing the nanotoxicity naturally and artificially will also be discussed in detail. Furthermore, we should notice that toxicity is not always bad for clinical use since causing the death of specific cells is the main way of treating disease. Enhancing the targeting ability of nanomaterials to diseased cells and minimizing their side effects on normal cells will always be hugely challenging issues in nanomedicine. By combining the latest computational studies with some experimental verifications, we will provide special insights into recent advances regarding these problems, especially for the design of novel environment-responsive nanomaterials. read less NOT USED (high confidence) E. Iakovlev, P. Zhilyaev, and I. Akhatov, “Atomistic study of the solid state inside graphene nanobubbles,” Scientific Reports. 2017. link Times cited: 23 NOT USED (high confidence) B. Mobedpour, R. Roumina, and S. Rajabdoust, “Atomic Insights into the Melting Behavior of Metallic Nano-catalysts.” 2017. link Times cited: 0 Abstract: In the present study, molecular dynamics simulations have be… read moreAbstract: In the present study, molecular dynamics simulations have been utilized to provide fundamental understanding of melting behavior of pure Pd and Pt nanoparticles with the size of 10 nm in diameter, both free and graphene-supported during continuous heating. The embedded atom method is employed to model the metal-metal interactions, whereas a Lennard-Jones potential is applied to describe the metal-carbon interactions. In addition, interactions between carbon atoms are defined by the adaptive intermolecular reactive bond order potential. Heating curves calculated between 298 K-2000 K are used to determine solid-liquid transitions. Based on simulation results, three approaches are used to investigate the thermal behavior of Pd and Pt nanoparticles. These include potential energy variation, the percentage of FCC atoms as a function of temperature and the mean square displacement method. Melting temperature of nanoparticles is found to decrease when the particles are supported by the graphene substrate. The decrease in melting temperature of particles is ascribed to the interaction of carbon atoms with nanoparticles. Structural changes during melting of nanoparticles are also detected through the common neighbor analysis and the mean square displacement method. The analyses of crystal structure shows that the supported nanoparticles melt from surface. In addition, a sharp increase in the mean square displacement of supported nanoparticles is observed after melting which is suggested to be responsible for the reduction of melting point of nanoparticles. read less NOT USED (high confidence) A. Alian, S. Meguid, and S. I. Kundalwal, “Unraveling the influence of grain boundaries on the mechanical properties of polycrystalline carbon nanotubes,” Carbon. 2017. link Times cited: 46 NOT USED (high confidence) V. Dozhdikov, A. Basharin, P. Levashov, and D. Minakov, “Atomistic simulations of the equation of state and hybridization of liquid carbon at a temperature of 6000 K in the pressure range of 1-25 GPa.,” The Journal of chemical physics. 2017. link Times cited: 16 Abstract: The equation of state and the structure of liquid carbon are… read moreAbstract: The equation of state and the structure of liquid carbon are studied by molecular simulation. Both classical and quantum molecular dynamics (QMD) are used to calculate the equation of state and the distribution of chemical bonds at 6000 K in the pressure range 1-25 GPa. Our calculations and results of other authors show that liquid carbon has a fairly low density on the order of 1.2-1.35 g/cm3 at pressures about 1 GPa. Owing to the coordination number analysis, this fact can be attributed to the high content of sp1-bonded atoms (more than 50% according to our ab initio computations). Six empirical potentials have been tested in order to describe the density dependence of pressure and structure at 6000 K. As a result, only one potential, ReaxFF/lg, was able to reproduce the QMD simulations for both the equation of state and the fraction of sp1, sp2, sp3-bonded atoms. read less NOT USED (high confidence) M. Saiz-Bretín, M. Saiz-Bretín, A. V. Malyshev, F. Domínguez‐Adame, D. Quigley, and R. Römer, “Lattice thermal conductivity of graphene nanostructures,” Carbon. 2017. link Times cited: 20 NOT USED (high confidence) F. Mehralian and Y. T. Beni, “Molecular dynamics analysis on axial buckling of functionalized carbon nanotubes in thermal environment,” Journal of Molecular Modeling. 2017. link Times cited: 6 NOT USED (high confidence) T. Jacobs and A. Martini, “Measuring and Understanding Contact Area at the Nanoscale: A Review,” Applied Mechanics Reviews. 2017. link Times cited: 80 Abstract: The size of the mechanical contact between nanoscale bodies … read moreAbstract: The size of the mechanical contact between nanoscale bodies that are pressed together under load has implications for adhesion, friction, and electrical and thermal transport at small scales. Yet, because the contact is buried between the two bodies, it is challenging to accurately measure the true contact area and to understand its dependence on load and material properties. Recent advancements in both experimental techniques and simulation methodologies have provided unprecedented insights into nanoscale contacts. This review provides a detailed look at the current understanding of nanocontacts. Experimental methods for determining contact area are discussed, including direct measurements using in situ electron microscopy, as well as indirect methods based on measurements of contact resistance, contact stiffness, lateral forces, and topography. Simulation techniques are also discussed, including the types of nanocontact modeling that has been performed and the various methods for extracting the magnitude of the contact area from a simulation. To describe and predict contact area, three different theories of nanoscale contact are reviewed: single-contact continuum mechanics; multi-contact continuum mechanics; and atomistic accounting. Representative results from nanoscale experimental and simulation investigations are presented in the context of these theories. Finally, the critical challenges are described, as well as the opportunities on the path to establishing a fundamental and actionable understanding of what it means to be “in contact” at the nanoscale. read less NOT USED (high confidence) Z. Fthenakis, G. Kalosakas, G. D. Chatzidakis, C. Galiotis, K. Papagelis, and N. Lathiotakis, “Atomistic potential for graphene and other sp2 carbon systems.,” Physical chemistry chemical physics : PCCP. 2017. link Times cited: 9 Abstract: We introduce a torsional force field for sp2 carbon to augme… read moreAbstract: We introduce a torsional force field for sp2 carbon to augment an in-plane atomistic potential of a previous work [G. Kalosakas et al., J. Appl. Phys., 2013, 113, 134307] so that it is applicable to out-of-plane deformations of graphene and related carbon materials. The introduced force field is fit to reproduce density-functional-theory calculation data of appropriately chosen structures. The aim is to create a force field that is as simple as possible so it can be efficient for large scale atomistic simulations of various sp2 carbon structures without significant loss of accuracy. We show that the complete proposed potential reproduces characteristic properties of fullerenes and carbon nanotubes. In addition, it reproduces very accurately the out-of-plane acoustic and optical modes of graphene's phonon dispersion as well as all phonons with frequencies up to 1000 cm-1. read less NOT USED (high confidence) D. Liao, W. Chen, J. Zhang, and Y. Yue, “Tuning thermal conductance of CNT interface junction via stretching and atomic bonding,” Journal of Physics D: Applied Physics. 2017. link Times cited: 11 Abstract: In this work, various effects of stretching and bonding stre… read moreAbstract: In this work, various effects of stretching and bonding strength on the thermal transport at CNT junctions are comprehensively studied by classical molecular dynamics (MD) simulations. The modeling is performed on a typical parallel-aligned junction formed by two single-walled (10, 10) CNTs. The overlap length is the first condition we studied and it is found that thermal conductance is significantly increased from 1.00 to 11.76 nW K−1 with overlap length from 0.982 to 6.877 nm. Surprisingly, the thermal conductance per unit overlap length is increased rather than a constant value. The van der Waals interaction in non-bonded CNTs has a positive correlation on thermal conductance, which means thermal conductance can be effectively enhanced by applied force in the inter-tube direction. In the axial direction, the applied force is an important condition to adjust thermal conductance at bonded junction. Results show that the thermal conductance for overlap length of 1.966 nm can be enhanced from 2.81 to 3.42 nW K−1 at the initial stage because of the combined squeezing force. However, as applied force approaches the breaking value, the atomic bonding at the junction is greatly weakened with a rapidly dropping thermal conductance from 3.42 to 1.88 nW K−1. read less NOT USED (high confidence) M. Thompson et al., “An Atomistic Carbide-Derived Carbon Model Generated Using ReaxFF-Based Quenched Molecular Dynamics.” 2017. link Times cited: 21 Abstract: We report a novel atomistic model of carbide-derived carbons… read moreAbstract: We report a novel atomistic model of carbide-derived carbons (CDCs), which are nanoporous carbons with high specific surface areas, synthesis-dependent degrees of graphitization, and well-ordered, tunable porosities. These properties make CDCs viable substrates in several energy-relevant applications, such as gas storage media, electrochemical capacitors, and catalytic supports. These materials are heterogenous, non-ideal structures and include several important parameters that govern their performance. Therefore, a realistic model of the CDC structure is needed in order to study these systems and their nanoscale and macroscale properties with molecular simulation. We report the use of the ReaxFF reactive force field in a quenched molecular dynamics routine to generate atomistic CDC models. The pair distribution function, pore size distribution, and adsorptive properties of this model are reported and corroborated with experimental data. Simulations demonstrate that compressing the system after quenching changes the pore size distribution to better match the experimental target. Ring size distributions of this model demonstrate the prevalence of non-hexagonal carbon rings in CDCs. These effects may contrast the properties of CDCs against those of activated carbons with similar pore size distributions and explain higher energy densities of CDC-based supercapacitors. read less NOT USED (high confidence) C. Chen, L. Zhao, J. Wang, and S. Lin, “Reactive Molecular Dynamics Simulations of Biomass Pyrolysis and Combustion under Various Oxidative and Humidity Environments,” Industrial & Engineering Chemistry Research. 2017. link Times cited: 49 Abstract: Biomass, as a renewable carbon neutral energy source with ab… read moreAbstract: Biomass, as a renewable carbon neutral energy source with abundant reserves, is a good candidate for future energy supplies. In this paper, a simplified biomass model composed of cellulose, hemicellulose, and lignin, described by a carefully selected reactive force field (ReaxFF), is investigated using molecular dynamics (MD) simulations. The pyrolysis and combustion processes of the biomass under different temperatures and oxidative and humidity conditions, are studied. We find that the individual products from the pyrolysis of the three biomass components are similar, including H2O, H2, CO, CO2, and small organic molecules. The calculated activation energies for C–C bond dissociation are 34.53, 26.08, and 16.23 kJ mol–1, respectively, for cellulose, hemicellulose, and lignin, consistent with the trend in experiments. Interestingly, light tar (C5–13) production reaches a maximum under intermediate temperatures, which could be further explored to optimize the production of light tar as liquid fuels. Compa... read less NOT USED (high confidence) Y. Joko, R. Sasaki, and K. Shintani, “Dynamic encapsulation of corannulene molecules into a single-walled carbon nanotube.,” Physical chemistry chemical physics : PCCP. 2017. link Times cited: 3 Abstract: The morphology of corannulene molecules encapsulated in a si… read moreAbstract: The morphology of corannulene molecules encapsulated in a single-walled carbon nanotube (SWCNT) is addressed using atomistic simulations. Firstly, dynamic simulation (DS) of encapsulation of corannulene molecules into a SWCNT is performed using a molecular dynamics (MD) method. It is revealed that corannulene molecules encapsulated in a SWCNT tend to form concave-concave (CC) dimers, and these dimers make stacks tilting against the SWCNT axis or take an arrangement such that their convex surfaces face the inner wall of the SWCNT. This tendency arises from the fact that the van der Waals interactions between the convex surfaces of the corannulene molecules and the inner wall of the SWCNT dominate in their dynamic encapsulation into the SWCNT, and CC dimers are favored based on the energetics. Next, conjugate gradient (CG) energy minimizations starting from two kinds of initial arrangement of corannulene molecules in a SWCNT, concave-convex (CV) and CC/convex-convex (VV) arrangements, are performed. The CG energy minimizations confirm the result of DS that CC dimers are the structural motif of corannulene molecules in a SWCNT. From the final configurations of both the simulations, the tilt angles and intermolecular distances of the stacked molecules are calculated. With increasing the SWCNT diameter, the tilt angles decrease while the intermolecular distances remain almost constant. The tilt angles of the stacked corannulene molecules are approximately expressed by a semi-analytical formula which is derived on the basis of a geometrical constraint condition. read less NOT USED (high confidence) P. Rowe, G. Csányi, D. Alfé, and A. Michaelides, “Development of a machine learning potential for graphene,” Physical Review B. 2017. link Times cited: 120 Abstract: © 2018 American Physical Society. We present an accurate int… read moreAbstract: © 2018 American Physical Society. We present an accurate interatomic potential for graphene, constructed using the Gaussian approximation potential (GAP) machine learning methodology. This GAP model obtains a faithful representation of a density functional theory (DFT) potential energy surface, facilitating highly accurate (approaching the accuracy of ab initio methods) molecular dynamics simulations. This is achieved at a computational cost which is orders of magnitude lower than that of comparable calculations which directly invoke electronic structure methods. We evaluate the accuracy of our machine learning model alongside that of a number of popular empirical and bond-order potentials, using both experimental and ab initio data as references. We find that whilst significant discrepancies exist between the empirical interatomic potentials and the reference data - and amongst the empirical potentials themselves - the machine learning model introduced here provides exemplary performance in all of the tested areas. The calculated properties include: graphene phonon dispersion curves at 0 K (which we predict with sub-meV accuracy), phonon spectra at finite temperature, in-plane thermal expansion up to 2500 K as compared to NPT ab initio molecular dynamics simulations and a comparison of the thermally induced dispersion of graphene Raman bands to experimental observations. We have made our potential freely available online at [http://www.libatoms.org]. read less NOT USED (high confidence) A. Nobakht, S. Shin, K. Kihm, D. C. Marable, and W. Lee, “Heat flow diversion in supported graphene nanomesh,” Carbon. 2017. link Times cited: 20 NOT USED (high confidence) X. Yuan and Y. Wang, “Adhesion of single- and multi-walled carbon nanotubes to silicon substrate: atomistic simulations and continuum analysis,” Journal of Physics D: Applied Physics. 2017. link Times cited: 13 Abstract: The radial deformation of carbon nanotubes (CNTs) adhering t… read moreAbstract: The radial deformation of carbon nanotubes (CNTs) adhering to a substrate may prominently affect their mechanical and physical properties. In this study, both classical atomistic simulations and continuum analysis are carried out, to investigate the lateral adhesion of single-walled CNTs (SWCNTs) and multi-walled CNTs (MWCNTs) to a silicon substrate. A linear elastic model for analyzing the adhesion of 2D shells to a rigid semi-infinite substrate is constructed in the framework of continuum mechanics. Good agreement is achieved between the cross-section profiles of adhesive CNTs obtained by the continuum model and by the atomistic simulation approach. It is found that the adhesion of a CNT to the silicon substrate is significantly influenced by its initial diameter and the number of walls. CNTs with radius larger than a certain critical radius are deformed radially on the silicon substrate with flat contact regions. With increasing number of walls, the extent of radial deformation of a MWCNT on the substrate decreases dramatically, and the flat contact area reduces—and eventually vanishes—due to increasing equivalent bending stiffness. It is analytically predicted that large-diameter MWCNTs with a large number of walls are likely to ‘stand’ on the silicon substrate. The present work can be useful for understanding the radial deformation of CNTs adhering to a solid planar substrate. read less NOT USED (high confidence) K. Cai, J. Shi, L. Liu, and Q. Qin, “Fabrication of an ideal nanoring from a black phosphorus nanoribbon upon movable bundling carbon nanotubes,” Nanotechnology. 2017. link Times cited: 11 Abstract: As a low dimensional material, black phosphorus (BP) continu… read moreAbstract: As a low dimensional material, black phosphorus (BP) continues to attract much attention from researchers due to its excellent electric properties. In particular, the one-dimensional material, in the form of a ring or tube formed from BP, has been extensively studied and found to be a perfect semiconductor. But the BP ring has never been reported in laboratories. To form an ideal ring from a rectangular BP ribbon, we choose a carbon nanotube (CNT) bundle to attract the ribbon and move one or more CNTs in the bundle to induce the unsaturated ends of the BP ribbon to become covalently bonded. Numerical experiments are applied to BP ribbons with lengths either equal to, shorter, or longer than the perimeter of the CNT bundle, to investigate the formation of a BP ring. Experiments show that if one end of the BP ribbon is attracted by a CNT, moving the other CNTs away endows the ribbon with high probability of forming an ideal ring. The conclusions drawn from these results will benefit future in situ experiments involving forming a ring from a BP ribbon. read less NOT USED (high confidence) D. Damasceno, E. Mesquita, and R. Rajapakse, “Mechanical Behavior of Nano Structures Using Atomic-Scale Finite Element Method (AFEM),” Latin American Journal of Solids and Structures. 2017. link Times cited: 5 Abstract: THIS WORK PRESENTS A DETAILED DESCRIPTION OF THE FORMULATION… read moreAbstract: THIS WORK PRESENTS A DETAILED DESCRIPTION OF THE FORMULATION AND IM-PLEMENTATION OF THE ATOMISTIC FINITE ELEMENT METHOD AFEM, EXEMPLI-FIED IN THE ANALYSIS OF ONE- AND TWO-DIMENSIONAL ATOMIC DOMAINS GOV-ERNED BY THE LENNARD JONES INTERATOMIC POTENTIAL. THE METHODOLOGY TO SYNTHESIZE ELEMENT STIFFNESS MATRICES AND LOAD VECTORS, THE POTENTIAL ENERGY MODIFICATION OF THE ATOMISTIC FINITE ELEMENTS (AFE) TO ACCOUNT FOR BOUNDARY EDGE EFFECTS, THE INCLUSION OF BOUNDARY CONDITIONS IS CARE-FULLY DESCRIBED. THE CONCEPTUAL RELATION BETWEEN THE CUT-OFF RADIUS OF INTERATOMIC POTENTIALS AND THE NUMBER OF NODES IN THE AFE IS ADDRESSED AND EXEMPLIFIED FOR THE 1D CASE. FOR THE 1D CASE ELEMENTS WITH 3, 5 AND 7 NODES WERE ADDRESSED. THE AFEM HAS BEEN USED TO DESCRIBE THE ME-CHANICAL BEHAVIOR OF ONE-DIMENSIONAL ATOMIC ARRAYS AS WELL AS TWO-DIMENSIONAL LATTICES OF ATOMS. THE EXAMPLES ALSO INCLUDED THE ANALYSIS OF PRISTINE DOMAINS, AS WELL AS DOMAINS WITH MISSING ATOMS, DEFECTS, OR VACANCIES. RESULTS ARE COMPARED WITH CLASSICAL MOLECULAR DYNAMIC SIMULATIONS (MD) PERFORMED USING A COMMERCIAL PACKAGE. THE RESULTS HAVE BEEN VERY ENCOURAGING IN TERMS OF ACCURACY AND IN THE COMPUTA-TIONAL EFFORT NECESSARY TO EXECUTE BOTH METHODOLOGIES, AFEM AND MD. THE METHODOLOGY CAN BE EXPANDED TO MODEL ANY DOMAIN DESCRIBED BY AN INTERATOMIC ENERGY POTENTIAL. read less NOT USED (high confidence) P. Wolski, J. Narkiewicz-Michałek, M. Pańczyk, G. Pastorin, and T. Panczyk, “Molecular Dynamics Modeling of the Encapsulation and De-encapsulation of the Carmustine Anticancer Drug in the Inner Volume of a Carbon Nanotube,” Journal of Physical Chemistry C. 2017. link Times cited: 14 Abstract: This work deals with the design of a nanocontainer that is a… read moreAbstract: This work deals with the design of a nanocontainer that is able to carry hydrolytically labile molecules like carmustine, undergo selective endocytosis by cancer cells, and de-encapsulate its cargo on demand by application of an external magnetic field. The molecular architecture of the nanocontainer does not differ much from the already known and experimentally characterized systems designed for the realization of stimuli-responsive anticancer drugs carriers. It comprises a carbon nanotube (for the encapsulation of drug molecules in its inner volume) and functionalized nanoparticles, which act as caps to the nanotube and are linked with the nanotube tips by linkers containing hydrazone bonds fragments. At acidic pH, the hydrazone bonds hydrolyze, and the nanotube should be uncapped as the nanoparticles are no longer covalently linked with the nanotube. This simple mechanism is, however, not always operational due to the significant role of nonbonded interactions between the nanotube and the nanoparticles... read less NOT USED (high confidence) A. Galashev and O. Rakhmanova, “Molecular-Dynamic Calculation of Effects Appearing in Removing a Lead Film from Graphene,” Journal of Engineering Physics and Thermophysics. 2017. link Times cited: 0 NOT USED (high confidence) S. Sahmani and A. Fattahi, “Development an efficient calibrated nonlocal plate model for nonlinear axial instability of zirconia nanosheets using molecular dynamics simulation.,” Journal of molecular graphics & modelling. 2017. link Times cited: 36 NOT USED (high confidence) K. Cai, J.-zhou Yu, J. Shi, and Q. Qin, “Spectrum of Temperature-Dependent Rotational Frequency of the Rotor in a Thermally Diven Rotary Nanomotor,” Journal of Physical Chemistry C. 2017. link Times cited: 13 Abstract: By fixing of the outer tube of double-walled carbon nanotube… read moreAbstract: By fixing of the outer tube of double-walled carbon nanotubes, a thermally driven rotary nanomotor can be obtained one or more carbon atoms at the end of the stator have an obvious inward radial deviation. Due to the asymmetry of the potential field of the stator, a collision between two tubes leads to the axial component of angular momentum that drives the rotation of the rotor. Relative sliding between the two tubes is resisted due to the roughness of the potential field of stators. Hence, the rotational frequency of the rotor has a maximal value in the balanced state. The spectrum of rotational frequency with respect to temperatures from 8 to 2000 K is presented by means of molecular dynamics simulation. The temperature interval is divided into five zones on the basis of the characteristics of the spectrum. In the robust zone, the nanomotor exhibits stationary rotation. In the controllable zone, the rotational frequency of rotor can be adjusted by varying the temperature. In particular, if a rotating r... read less NOT USED (high confidence) G. D. Chatzidakis, G. Kalosakas, Z. Fthenakis, and N. Lathiotakis, “A torsional potential for graphene derived from fitting to DFT results,” The European Physical Journal B. 2017. link Times cited: 5 NOT USED (high confidence) B. Zhu et al., “Novel Polyethylene Fibers of Very High Thermal Conductivity Enabled by Amorphous Restructuring,” ACS Omega. 2017. link Times cited: 73 Abstract: High-thermal-conductivity polymers are very sought after for… read moreAbstract: High-thermal-conductivity polymers are very sought after for applications in various thermal management systems. Although improving crystallinity is a common way for increasing the thermal conductivity (k) of polymers, it has very limited capacity when the crystallinity is already high. In this work, by heat-stretching a highly crystalline microfiber, a significant k enhancement is observed. More interestingly, it coincides with a reduction in crystallinity. The sample is a Spectra S-900 ultrahigh-molecular-weight polyethylene (UHMW-PE) microfiber of 92% crystallinity and high degree of orientation. The optimum stretching condition is 131.5 °C, with a strain rate of 0.0129 s–1 to a low strain ratio (∼6.6) followed by air quenching. The k enhancement is from 21 to 51 W/(m·K), the highest value for UHMW-PE microfibers reported to date. X-ray diffraction study finds that the crystallinity reduces to 83% after stretching, whereas the crystallite size and crystallite orientation are not changed. Cryogenic thermal characterization shows a reduced level of phonon-defect scattering near 30 K. Polarization Raman spectroscopy finds enhanced alignment of amorphous chains, which could be the main reason for the k enhancement. A possible relocation of amorphous phase is also discussed and indirectly supported by a bending test. read less NOT USED (high confidence) J. Shang, Q. Yang, and X. Liu, “New Coarse-Grained Model and Its Implementation in Simulations of Graphene Assemblies.,” Journal of chemical theory and computation. 2017. link Times cited: 18 Abstract: Graphene is a one-atom thick layer of carbon atoms arranged … read moreAbstract: Graphene is a one-atom thick layer of carbon atoms arranged in a hexagonal pattern, which makes it the strongest material in the world. The Tersoff potential is a suitable potential for simulating the mechanical behavior of the complex covalently bonded system of graphene. In this paper, we describe a new coarse-grained (CG) potential, TersoffCG, which is based on the function form of the Tersoff potential. The TersoffCG applies to a CG model of graphene that uses the same hexagonal pattern as the atomistic model. The parameters of the TersoffCG potential are determined using structural feature and potential-energy fitting between the CG model and the atomic model. The modeling process of graphene is highly simplified using the present CG model as it avoids the necessity to define bonds/angles/dihedrals connectivity. What is more, the present CG model provides a new perspective of coarse-graining scheme for crystal structures of nanomaterials. The structural changes and mechanical properties of multilayer graphene were calculated using the new potential. Furthermore, a CG model of a graphene aerogel was built in a specific form of assembly. The chemical bonding in the joints of graphene-aerogel forms automatically during the energy relaxation process. The compressive and recover test of the graphene aerogel was reproduced to study its high elasticity. Our computational examples show that the TersoffCG potential can be used for simulations of graphene and its assemblies, which have many applications in areas of environmental protection, aerospace engineering, and others. read less NOT USED (high confidence) Q. Pei, X. Zhang, Z. Ding, Y. Zhang, and Y.-W. Zhang, “Thermal stability and thermal conductivity of phosphorene in phosphorene/graphene van der Waals heterostructures.,” Physical chemistry chemical physics : PCCP. 2017. link Times cited: 34 Abstract: Phosphorene, a new two-dimensional (2D) semiconducting mater… read moreAbstract: Phosphorene, a new two-dimensional (2D) semiconducting material, has attracted tremendous attention recently. However, its structural instability under ambient conditions poses a great challenge to its practical applications. A possible solution for this problem is to encapsulate phosphorene with more stable 2D materials, such as graphene, forming van der Waals heterostructures. In this study, using molecular dynamics simulations, we show that the thermal stability of phosphorene in phosphorene/graphene heterostructures can be enhanced significantly. By sandwiching phosphorene between two graphene sheets, its thermally stable temperature is increased by 150 K. We further study the thermal transport properties of phosphorene and find surprisingly that the in-plane thermal conductivity of phosphorene in phosphorene/graphene heterostructures is much higher than that of the free-standing one, with a net increase of 20-60%. This surprising increase in thermal conductivity arises from the increase in phonon group velocity and the extremely strong phonon coupling between phosphorene and the graphene substrate. Our findings have an important meaning for the practical applications of phosphorene in nanodevices. read less NOT USED (high confidence) A. Galashev and O. Rakhmanova, “Molecular-Dynamic Calculation of Effects Appearing in Removing a Lead Film from Graphene,” Journal of Engineering Physics and Thermophysics. 2017. link Times cited: 0 NOT USED (high confidence) J. Shang, Q. Yang, and Y. Lu, “Nature of the pull-out system of carbon nanorope/polyethylene composite and twisting effect on interfacial behavior,” Journal of Wuhan University of Technology-Mater. Sci. Ed. 2017. link Times cited: 0 NOT USED (high confidence) C. Davini, A. Favata, and R. Paroni, “A new material property of graphene: The bending Poisson coefficient,” Europhysics Letters. 2017. link Times cited: 9 Abstract: The in-plane infinitesimal deformations of graphene are well… read moreAbstract: The in-plane infinitesimal deformations of graphene are well understood: they can be computed by solving the equilibrium problem for a sheet of isotropic elastic material with suitable stretching stiffness and Poisson coefficient . Here, we pose the following question: does the Poisson coefficient affect the response to bending of graphene? Despite what happens if one adopts classical structural models, it does not. In this letter we show that a new material property, conceptually and quantitatively different from , has to be introduced. We term this new parameter bending Poisson coefficient; we propose for it a physical interpretation in terms of the atomic interactions and produce a quantitative evaluation. read less NOT USED (high confidence) S. Ambrogio et al., “Modeling resistive switching materials and devices across scales,” Journal of Electroceramics. 2017. link Times cited: 18 NOT USED (high confidence) Y. A. Kvashnina, D. Kvashnin, A. Kvashnin, and P. Sorokin, “New allotropic forms of carbon based on С60 and С20 fullerenes with specific mechanical characteristics,” JETP Letters. 2017. link Times cited: 5 NOT USED (high confidence) Z. Meng et al., “A coarse-grained model for the mechanical behavior of graphene oxide,” Carbon. 2017. link Times cited: 42 NOT USED (high confidence) M. Dewapriya and S. Meguid, “Atomistic modeling of out-of-plane deformation of a propagating Griffith crack in graphene,” Acta Mechanica. 2017. link Times cited: 23 NOT USED (high confidence) M. Dewapriya and S. Meguid, “Atomistic modeling of out-of-plane deformation of a propagating Griffith crack in graphene,” Acta Mechanica. 2017. link Times cited: 0 NOT USED (high confidence) M. Gatchell et al., “Ion-induced molecular growth in clusters of small hydrocarbon chains.,” Physical chemistry chemical physics : PCCP. 2017. link Times cited: 9 Abstract: We report on studies of collisions between 3 keV Ar+ project… read moreAbstract: We report on studies of collisions between 3 keV Ar+ projectile ions and neutral targets of isolated 1,3-butadiene (C4H6) molecules and cold, loosely bound clusters of these molecules. We identify molecular growth processes within the molecular clusters that appears to be driven by knockout processes and that could result in the formation of (aromatic) ring structures. These types of reactions are not unique to specific projectile ions and target molecules, but will occur whenever atoms or ions with suitable masses and kinetic energies collide with aggregates of matter, such as carbonaceous grains in the interstellar medium or aerosol nanoparticles in the atmosphere. read less NOT USED (high confidence) A. Paajanen and J. Vaari, “High-temperature decomposition of the cellulose molecule: a stochastic molecular dynamics study,” Cellulose. 2017. link Times cited: 57 NOT USED (high confidence) F. Mehralian, Y. T. Beni, and Y. Kiani, “Thermal buckling behavior of defective CNTs under pre-load: A molecular dynamics study.,” Journal of molecular graphics & modelling. 2017. link Times cited: 14 NOT USED (high confidence) F. Montero-Chacón et al., “Multiscale thermo-mechanical analysis of multi-layered coatings in solar thermal applications,” Finite Elements in Analysis and Design. 2017. link Times cited: 16 NOT USED (high confidence) J. Zhang, T. Ragab, and C. Basaran, “The effects of vacancy defect on the fracture behaviors of zigzag graphene nanoribbons,” International Journal of Damage Mechanics. 2017. link Times cited: 19 Abstract: Zigzag graphene nanoribbons with and without single vacancy … read moreAbstract: Zigzag graphene nanoribbons with and without single vacancy defect are strained under uniaxial tension using molecular dynamics simulations. In order to understand the influence of vacancy defect on the damage mechanics, the graphene nanoribbons are categorized into six groups based on their width, ranging from 2.5 nm to 15 nm. In each group, the length of GRNGNR also varied from 2.5 nm to 15 nm. The comparison of the stress–strain relationship and the fracture behavior of pristine and defective graphene nanoribbon demonstrate that single vacancy defect has little influence on the elastic modulus and the ultimate strength of graphene nanoribbons. However, size effect does have an influence on the ultimate failure stress of the graphene nanoribbon. read less NOT USED (high confidence) M. Burger, C. Bischof, C. Schröppel, and J. Wackerfuß, “Methods to model and simulate super carbon nanotubes of higher order,” Concurrency and Computation: Practice and Experience. 2017. link Times cited: 4 Abstract: Super carbon nanotubes (SCNTs) are of interest in material d… read moreAbstract: Super carbon nanotubes (SCNTs) are of interest in material design because of their strength and weight characteristics. In this paper, we present a graph algebra‐based approach to model and construct SCNTs of arbitrary order. The SCNTs are represented by directed graphs with Y junctions as basic modeling element. A new data structure to store these graphs is proposed that capitalizes on the hierarchy within SCNTs and allows efficient queries for nodes and edges. Symmetry considerations for SCNTs are conducted and related to the graph algebra‐based modeling. We present an extended and improved algorithm for simulating the mechanical behavior of SCNTs. Compared with our previous work on level 0 SCNTs, the performance is improved by a factor higher than 2 when running in serial and a factor up to 4.4 when running in parallel on a 16‐core symmetric multiprocessing system. A new pre‐processing step exploiting structural symmetry and an improved proximity‐aware matrix‐vector‐multiplication routine make this performance improvement possible while only consuming little additional memory. We also now consider SCNTs of order 1 and 2. Experimental results show that our new solver is up to 1.4 times faster than a compressed‐row‐storage based reference solver, on order 0, 1, and 2 SCNTs, with and without deformations, while requiring only half the memory. Because memory is the limiting factor for the feasibility of such simulations, our new approach significantly expands the realm of feasibility for such simulations. Copyright © 2016 John Wiley & Sons, Ltd. read less NOT USED (high confidence) S. Hernández and A. F. Fonseca, “Anisotropic elastic modulus, high Poisson’s ratio and negative thermal expansion of graphynes and graphdiynes,” Diamond and Related Materials. 2017. link Times cited: 33 NOT USED (high confidence) C. Sun and B. Bai, “Diffusion of gas molecules on multilayer graphene surfaces: Dependence on the number of graphene layers,” Applied Thermal Engineering. 2017. link Times cited: 27 NOT USED (high confidence) C. Si, X.-dong Wang, Z. Fan, Z.-hai Feng, and B. Cao, “Impacts of potential models on calculating the thermal conductivity of graphene using non-equilibrium molecular dynamics simulations,” International Journal of Heat and Mass Transfer. 2017. link Times cited: 64 NOT USED (high confidence) A. Côté, A. Cormack, and A. Tilocca, “Reactive molecular dynamics: an effective tool for modelling the sol–gel synthesis of bioglasses,” Journal of Materials Science. 2017. link Times cited: 20 NOT USED (high confidence) J. Zhang and S. Meguid, “Piezoelectricity of 2D nanomaterials: characterization, properties, and applications,” Semiconductor Science and Technology. 2017. link Times cited: 46 Abstract: The discovery of piezoelectricity in 2D nanomaterials repres… read moreAbstract: The discovery of piezoelectricity in 2D nanomaterials represents a milestone towards embedding low-dimensional materials into future technologies. This article reviews recent progress in the characterization, properties evaluation, and applications of piezoelectricity of 2D piezoelectric nanomaterials (PNs). To begin, an introduction to the existing 2D PNs, which exhibit a wide range of atomic structures and configurations, is presented. The nanoscale measurements and associated experimental techniques as well as the atomic simulations of the piezoelectric properties of 2D PNs are then summarized. Some of the pertinent parameters, which govern the piezoelectric properties of 2D PNs, are discussed. Furthermore, our article concludes with some potential applications including piezotronics, piezophototronics, and energy harvesting of 2D PNs, which can open the doors to the innovative design of next-generation nanoelectronics and nanodevices. Finally, we highlight perspectives and challenges for the future development of 2D PNs. read less NOT USED (high confidence) H. Zhan, G. Zhang, V. Tan, and Y. T. Gu, “The best features of diamond nanothread for nanofibre applications,” Nature Communications. 2017. link Times cited: 55 NOT USED (high confidence) T. T. Trinh, N. Meling, D. Bedeaux, and S. Kjelstrup, “Thermodynamic Properties of Hydrogen Dissociation Reaction from the Small System Method and Reactive Force Field ReaxFF,” Chemical Physics Letters. 2017. link Times cited: 5 NOT USED (high confidence) S. Psakh’e, S. Psakh’e, K. Zolnikov, A. Korchuganov, D. Kryzhevich, and Y. Grinyaev, “Influence of the size and wall curvature of nanopores on the gas distribution pattern in them,” Journal of Applied Mechanics and Technical Physics. 2017. link Times cited: 1 NOT USED (high confidence) B. Deng et al., “The normal-auxeticity mechanical phase transition in graphene,” 2D Materials. 2017. link Times cited: 45 Abstract: When a solid object is stretched, in general, it shrinks tra… read moreAbstract: When a solid object is stretched, in general, it shrinks transversely. However, the abnormal ones are auxetic, which exhibit lateral expansion, or negative Poisson ratio. While graphene is a paradigm 2D material, surprisingly, graphene converts from normal to auxetic at certain strains. Here, we show via molecular dynamics simulations that the normal-auxeticity mechanical phase transition only occurs in uniaxial tension along the armchair direction or the nearest neighbor direction. Such a characteristic persists at temperatures up to 2400 K. Besides monolayer, bilayer and multi-layer graphene also possess such a normal-auxeticity transition. This unique property could extend the applications of graphene to new horizons. read less NOT USED (high confidence) E. Barani et al., “Transverse discrete breathers in unstrained graphene,” The European Physical Journal B. 2017. link Times cited: 55 NOT USED (high confidence) O. Glukhova, M. Slepchenkov, and D. S. Shmygin, “Nanoindentation of a new graphene/phospholipid composite: a numerical simulation,” BiOS. 2017. link Times cited: 2 Abstract: By means of an AMBER/AIREBO hybrid method we investigated in… read moreAbstract: By means of an AMBER/AIREBO hybrid method we investigated indentation of layered graphene/phospholipids composite in which the individual phospholipid molecules arranged between the graphene layers. As a result of calculations it was established that such composite is characterized by negative enthalpy of formation. An armchair carbon nanotube approaching with the speed of 10 m/s to the considered composite was used as an indenter. During the simulation it was found that under the action of indenter upper graphene layer in the composite starts to sag, exerting the pressure on the phospholipids which are located under it. Under the influence of pressure phospholipids begins to move on graphene trying to get away from the indenter. Therefore, by placing the phospholipids under improvised press it is possible to achieve their selective localization on graphene platform. The results of the calculations of the total energy of the studied molecular system showed that the value of energy begins to increase as the tube penetration deep inside the composite, indicating the loss of the structure stability. It was found that the strength of the layered graphene/phospholipids composite will increase with the increase in the number of graphene layers. read less NOT USED (high confidence) R. Smith et al., “A ReaXFF carbon potential for radiation damage studies,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2017. link Times cited: 24 NOT USED (high confidence) M. Kański, D. Maciążek, M. Gołuński, and Z. Postawa, “Sputtering of octatetraene by 15 keV C 60 projectiles: Comparison of reactive interatomic potentials,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2017. link Times cited: 3 NOT USED (high confidence) Y. Huang et al., “Fabrication and molecular dynamics analyses of highly thermal conductive reduced graphene oxide films at ultra-high temperatures.,” Nanoscale. 2017. link Times cited: 49 Abstract: Thin films with high thermal conductivity are urgently neede… read moreAbstract: Thin films with high thermal conductivity are urgently needed as heat dissipation materials for electronic devices. In this study, we developed a readily scalable roller coating method followed by ultra-high temperature annealing to prepare large-sized, free-standing, and flexible reduced graphene oxide (rGO) films with high thermal conductivity. The in-plane thermal conductivity measured by a laser flash method for the sample annealed at 2800 °C was 826.0 W m-1 K-1, which was much higher than that of copper foil. X-ray diffraction, Raman, and SEM analyses indicated that, different from common chemical reduction, heat treatment at high temperature could not only remove O, H, and other impure elements but also develop the in-plane crystal size of graphene and decrease the interlayer spacing of graphene sheets. Meanwhile, tight embedding during annealing and concomitant mechanical impaction was indispensable for retaining the shape and raising the density of the films. Furthermore, molecular dynamics analyses demonstrated that point defects, pentagonal/heptagonal defects, or even large in-plane holes in graphene could be rehabilitated to a great extent during ultra-high temperature annealing. In addition, real-time temperature monitoring demonstrated that the rGO films could act as an excellent thermal dissipation material in LED packages by reducing 10%-15% of the temperature increase. read less NOT USED (high confidence) C. J. Szwejkowski, A. Giri, R. Warzoha, B. F. Donovan, B. Kaehr, and P. Hopkins, “Molecular Tuning of the Vibrational Thermal Transport Mechanisms in Fullerene Derivative Solutions.,” ACS nano. 2017. link Times cited: 10 Abstract: Control over the thermal conductance from excited molecules … read moreAbstract: Control over the thermal conductance from excited molecules into an external environment is essential for the development of customized photothermal therapies and chemical processes. This control could be achieved through molecule tuning of the chemical moieties in fullerene derivatives. For example, the thermal transport properties in the fullerene derivatives indene-C60 monoadduct (ICMA), indene-C60 bisadduct (ICBA), [6,6]-phenyl C61 butyric acid methyl ester (PCBM), [6,6]-phenyl C61 butyric acid butyl ester (PCBB), and [6,6]-phenyl C61 butyric acid octyl ester (PCBO) could be tuned by choosing a functional group such that its intrinsic vibrational density of states bridge that of the parent molecule and a liquid. However, this effect has never been experimentally realized for molecular interfaces in liquid suspensions. Using the pump-probe technique time domain thermotransmittance, we measure the vibrational relaxation times of photoexcited fullerene derivatives in solutions and calculate an effective thermal boundary conductance from the opto-thermally excited molecule into the liquid. We relate the thermal boundary conductance to the vibrational modes of the functional groups using density of states calculations from molecular dynamics. Our findings indicate that the attachment of an ester group to a C60 molecule, such as in PCBM, PCBB, and PCBO, provides low-frequency modes which facilitate thermal coupling with the liquid. This offers a channel for heat flow in addition to direct coupling between the buckyball and the liquid. In contrast, the attachment of indene rings to C60 does not supply the same low-frequency modes and, thus, does not generate the same enhancement in thermal boundary conductance. Understanding how chemical functionalization of C60 affects the vibrational thermal transport in molecule/liquid systems allows the thermal boundary conductance to be manipulated and adapted for medical and chemical applications. read less NOT USED (high confidence) C. Sun and B. Bai, “Gas diffusion on graphene surfaces.,” Physical chemistry chemical physics : PCCP. 2017. link Times cited: 33 Abstract: Graphene provides a possibility where gas adsorption energy … read moreAbstract: Graphene provides a possibility where gas adsorption energy is comparable with molecular collision energy for physically adsorbed gases, resulting in the incompetence of the traditional hopping model to describe graphene-related surface diffusion phenomena. By calculating surface diffusion coefficients based on the Einstein equation, we exactly demonstrate that the gas diffusion on a graphene surface is a two-dimensional gas behavior mainly controlled by the collisions between adsorbed molecules. The surface diffusion on the graphene film just follows the bulk diffusion qualitatively, namely the diffusion coefficients decrease with increasing gas pressure. Quantitatively, the surface diffusion coefficients are lower than the bulk diffusion coefficients, predicted using the hard sphere model, owing to the restriction of graphene films. The reduction in diffusion coefficient is related to the simultaneously suppressed average frequency of molecular collisions and the average travelling distance between successive collisions. In addition, a lower diffusion coefficient on a hydrogen-functionalized graphene surface is identified, caused by the blocking effects of chemical functional groups. read less NOT USED (high confidence) K. Choudhary, F. Y. Congo, T. Liang, C. Becker, R. Hennig, and F. Tavazza, “Evaluation and comparison of classical interatomic potentials through a user-friendly interactive web-interface,” Scientific Data. 2017. link Times cited: 21 NOT USED (high confidence) S. Bhatia, “Characterizing Structural Complexity in Disordered Carbons: From the Slit Pore to Atomistic Models.,” Langmuir : the ACS journal of surfaces and colloids. 2017. link Times cited: 27 Abstract: The reliable characterization of nanoporous carbons is criti… read moreAbstract: The reliable characterization of nanoporous carbons is critical to the design and optimization of their numerous applications; however, the vast majority of carbons in industrial use are highly disordered, with complex structures whose understanding has long challenged researchers. The idealized slit pore model represents the most commonly used approximation to a carbon nanopore; nevertheless, it has been only partially successful in predicting adsorption isotherms and fails significantly in predicting transport properties because of its inability to capture structural disorder and its effect on fluid accessibility. Atomistic modeling of the structure has much potential for overcoming this limitation, and among such approaches, hybrid reverse Monte Carlo simulation has emerged as the most attractive. This method reconstructs the structure of a carbon based on the fitting of its experimentally measured pair distribution function and appropriate properties such as porosity while minimizing the energy. The method is shown to be best implemented using a multistage strategy, with the first stage used to attain a deep minimum of the energy and subsequent stages to refine the structure based on the fitting of specific properties. Methods to determine the accessibility of gases based on the atomistic structure are outlined, and it is shown that energy barriers are very sensitive to small differences in the sizes of constrictions and pore entries. The ability to accurately predict macroscopic transport coefficients of adsorbates in nanoporous carbons appears to be the greatest limitation of such models. Overcoming this will require the fitting of properties more sensitive to long-range disorder than the currently used pair distribution and the use of a suitable multiscaling strategy, which is suggested as a future direction for advancing atomistic models. The inclusion of heteroatoms in the structure is also an important area requiring further attention, particularly in the development of computationally efficient force fields incorporating their interactions. read less NOT USED (high confidence) L. M. Mej’ia-Mendoza, M. Vald’ez-Gonz’alez, J. Muñiz, U. Santiago, A. K. Cuentas-Gallegos, and M. Robles, “A theoretical approach to the nanoporous phase diagram of carbon,” Carbon. 2017. link Times cited: 20 NOT USED (high confidence) Y. Hu, X. Yu, J. Tao, Y. Liu, S. Zhao, and H. Liu, “Blocking effect of benzene-like fluid transport in nanoscale block-pores,” Molecular Simulation. 2017. link Times cited: 5 Abstract: The flux through nanoscale pore is one of the key quantities… read moreAbstract: The flux through nanoscale pore is one of the key quantities in many processes including membrane applications and fluid separation. Whereas many efforts have been dedicated to the investigation of the fluid flux in nano-channels, the fluid transport behaviours in the block-pores, which contain distinct parts with different geometries or interactions with fluid, are still poorly understood. In this work, by combining both non-equilibrium dynamics simulation and density functional theory, we developed an efficient method for investigating the fluid flux in the block-pores, with which the fluxes of benzene in graphene block slit pores containing a hydrophobic and a hydrophilic region are thereafter investigated. We demonstrate that a region with a stronger interaction with fluid generates a bottleneck for the fluid flow, which greatly suppresses the flux in the pore even though there is no geometrical variation. By tuning the fluid-substrate interaction, the flux inside can be controlled. This study gives clues for the practical application of membrane design. read less NOT USED (high confidence) B. Javvaji, S. Raha, and D. Mahapatra, “Length-scale and strain rate-dependent mechanism of defect formation and fracture in carbon nanotubes under tensile loading,” Journal of Nanoparticle Research. 2017. link Times cited: 6 NOT USED (high confidence) J. Shi, H. Cai, K. Cai, and Q. Qin, “Dynamic behavior of a black phosphorus and carbon nanotube composite system,” Journal of Physics D: Applied Physics. 2017. link Times cited: 23 Abstract: A double walled nanotube composite is constructed by placing… read moreAbstract: A double walled nanotube composite is constructed by placing a black-phosphorene-based nanotube (BPNT) in a carbon nanotube (CNT). When driving the CNT to rotate by stators in a thermal driven rotary nanomotor, the BPNT behaves differently from the CNT. For instance, the BPNT can be actuated to rotate by the CNT, but its rotational acceleration differs from that of the CNT. The BPNT oscillates along the tube axis when it is longer than the CNT. The results obtained indicate that the BPNT functions with high structural stability when acting as a rotor with rotational frequency of ~20 GHz at 250 K. If at a higher temperature than 250 K, say 300 K, the rotating BPNT shows weaker structural stability than its status at 250 K. When the two tubes in the rotor are of equal length, the rotational frequency of the BPNT drops rapidly after the BPNT is collapsed, owing to more broken P–P bonds. When the black-phosphorene nanotube is longer than the CNT, it rotates synchronously with the CNT even if it is collapsed. Hence, in the design of a nanomotor with a rotor from BPNT, the working rotational frequency should be lower than a certain threshold at a higher temperature. read less NOT USED (high confidence) X. Hu, N. Chan, A. Martini, and P. Egberts, “Tip convolution on HOPG surfaces measured in AM-AFM and interpreted using a combined experimental and simulation approach,” Nanotechnology. 2017. link Times cited: 8 Abstract: Amplitude modulated atomic force microscopy (AM-AFM) was use… read moreAbstract: Amplitude modulated atomic force microscopy (AM-AFM) was used to examine the influence of the size of the AFM tip apex on the measured surface topography of single highly oriented pyrolytic graphite (HOPG) atomic steps. Experimental measurements were complemented by molecular dynamics simulations of AM-AFM and the results from both were evaluated by comparison of the measured or simulated width of the topography at the step to that predicted using simple rigid-body geometry. The results showed that the step width, which is a reflection of the resolution of the measurement, increased with tip size, as expected, but also that the difference between the measured/simulated step width and the geometric calculation was tip size dependent. The simulations suggested that this may be due to the deformation of the bodies and the effect of that deformation on the interaction force and oscillation amplitude. Overall, this study showed that the resolution of AM-AFM measurements of atomic steps can be correlated to tip size and that this relationship is affected by the deformation of the system. read less NOT USED (high confidence) Y. Qi, J. Liu, J. Zhang, Y. Dong, and Q. Li, “Wear Resistance Limited by Step Edge Failure: The Rise and Fall of Graphene as an Atomically Thin Lubricating Material.,” ACS applied materials & interfaces. 2017. link Times cited: 67 Abstract: Owing to its intrinsically lubricious property, graphene has… read moreAbstract: Owing to its intrinsically lubricious property, graphene has a high potential to be an atomically thin solid lubricant for sliding interfaces. Despite its ultrahigh breaking strength at the nanoscale, graphene often fails to maintain its integrity when subjected to macroscale tribological tests. To reveal the true wear characteristics of graphene, a nanoscale diamond tip was used to scratch monolayer graphene mechanically exfoliated to SiO2 substrates. Our experimental results show that while graphene exhibited extraordinary wear resistance in the interior region, it could be easily damaged at the step edge under a much lower normal load (∼2 orders of magnitude smaller). Similar behavior with substantially reduced wear resistance at the edge was also observed for monatomic graphene layer on graphite surface. Using molecular dynamics simulations, we attributed this markedly weak wear resistance at the step edge to two primary mechanisms, i.e., atom-by-atom adhesive wear and peel induced rupture. Our findings shed light on the paradox that graphene is nanoscopically strong yet macroscopically weak. As step edge is ubiquitous for two-dimensional materials at the macroscale, our study also provides a guiding direction for maximizing the mechanical and tribological performance of these atomically thin materials. read less NOT USED (high confidence) M. Liao, Q. To, C. Léonard, V. monchiet, and V. Vo, “Strain-induced friction anisotropy between graphene and molecular liquids.,” The Journal of chemical physics. 2017. link Times cited: 3 Abstract: In this paper, we study the friction behavior of molecular l… read moreAbstract: In this paper, we study the friction behavior of molecular liquids with anisotropically strained graphene. Due to the changes of lattice and the potential energy surface, the friction is orientation dependent and can be computed by tensorial Green-Kubo formula. Simple quantitative estimations are also proposed for the zero-time response and agree reasonably well with the molecular dynamics results. From simulations, we can obtain the information of structures, dynamics of the system, and study the influence of strain and molecular shapes on the anisotropy degree. It is found that unilateral strain can increase friction in all directions but the strain direction is privileged. Numerical evidences also show that nonspherical molecules are more sensitive to strain and give rise to more pronounced anisotropy effects. read less NOT USED (high confidence) P. Li and K. Merz, “Metal Ion Modeling Using Classical Mechanics,” Chemical Reviews. 2017. link Times cited: 230 Abstract: Metal ions play significant roles in numerous fields includi… read moreAbstract: Metal ions play significant roles in numerous fields including chemistry, geochemistry, biochemistry, and materials science. With computational tools increasingly becoming important in chemical research, methods have emerged to effectively face the challenge of modeling metal ions in the gas, aqueous, and solid phases. Herein, we review both quantum and classical modeling strategies for metal ion-containing systems that have been developed over the past few decades. This Review focuses on classical metal ion modeling based on unpolarized models (including the nonbonded, bonded, cationic dummy atom, and combined models), polarizable models (e.g., the fluctuating charge, Drude oscillator, and the induced dipole models), the angular overlap model, and valence bond-based models. Quantum mechanical studies of metal ion-containing systems at the semiempirical, ab initio, and density functional levels of theory are reviewed as well with a particular focus on how these methods inform classical modeling efforts. Finally, conclusions and future prospects and directions are offered that will further enhance the classical modeling of metal ion-containing systems. read less NOT USED (high confidence) S. Psakh’e, K. P. Zol’nikov, A. Korchuganov, D. S. Kryzhevich, and Y. Grinyaev, “Influence of the size and wall curvature of nanopores on the gas distribution pattern in them,” Journal of Applied Mechanics and Technical Physics. 2017. link Times cited: 0 NOT USED (high confidence) G. L’opez-Pol’in et al., “Tailoring the thermal expansion of graphene via controlled defect creation,” Carbon. 2016. link Times cited: 37 NOT USED (high confidence) A. Tsukanov and S. Psakhie, “ADHESION EFFECTS WITHIN THE HARD MATTER – SOFT MATTER INTERFACE: MOLECULAR DYNAMICS.” 2016. link Times cited: 17 Abstract: In the present study three soft matter – hard matter systems… read moreAbstract: In the present study three soft matter – hard matter systems consisting of different nanomaterials and organic molecules were studied using the steered molecular dynamics approach in order to reveal regularities in the formation of organic-inorganic hybrids and the stability of multimolecular complexes, as well as to analyze the energy aspects of adhesion between bio-molecules and layered ceramics. The combined process free energy estimation (COPFEE) procedure was used for quantitative and qualitative assessment of the considered heterogeneous systems. Interaction of anionic and cationic amino acids with the surface of a [Mg4Al2(OH)122+ 2Cl–] layered double hydroxide (LDH) nanosheet was considered. In both cases, strong adhesion was observed despite the opposite signs of electric charge. The free energy of the aspartic amino acid anion, which has two deprotonated carboxylic groups, was determined to be –45 kJ/mol for adsorption on the LDH surface. For the cationic arginine, with only one carboxylic group and a positive net charge, the energy of adsorption was –26 kJ/mol, which is twice higher than that of chloride anion adsorption on the same cationic nanosheet. This fact clearly demonstrates the capability of “soft matter” species to adjust themselves and fit into the surface, minimizing energy of the system. The adsorption of protonated histamine, having no carboxylic groups, on a boehmite nanosheet is also energetically favorable, but the depth of free energy well is quite small at 3.6 kJ/mol. In the adsorbed state the protonated amino-group of histamine plays the role of proton donor, while the hydroxyl oxygens of the layered hydroxide have the role of proton acceptor, which is unusual. The obtained results represent a small step towards further understanding of the adhesion effects within the hard matter – soft matter contact zone. read less NOT USED (high confidence) Z.-Q. Ye and B. Cao, “Nanoscale thermal cloaking in graphene via chemical functionalization.,” Physical chemistry chemical physics : PCCP. 2016. link Times cited: 26 Abstract: Macro-thermal cloaking is typically produced by coordinate t… read moreAbstract: Macro-thermal cloaking is typically produced by coordinate transformations, but this method is unsuitable for nanostructures. We designed a graphene-based nanoscale thermal cloak using a novel mechanism of phonon localization. The nanocloak in graphene was produced via the chemical functionalization of hydrogen, methyl and hydroxyl using molecular dynamics simulations. The cloaking performance was quantified by the ratio of thermal cloaking (RTC). We found that the RTC correlated with the functionalization fraction and it has a local maximum at a certain width, since the heat flux reduction in the exterior and the protected region reversed if the width was excessive. The atomic mass of the functional group also correlated with the RTC. Our simulations determined that phonon localization occurred due to sp2-to-sp3 bonding transitions, which caused the heat flux to avoid the transition region. Finally, the extent of phonon localization was related to the cloaking performance. read less NOT USED (high confidence) H. M. Yoon and J. S. Lee, “Effect of the contact geometry on nanoscale and sub-nanoscale friction behaviors,” 2016 Asia-Pacific Magnetic Recording Conference Digest (APMRC). 2016. link Times cited: 0 Abstract: Stick-slip motion is the most well-known phenomenon in nano-… read moreAbstract: Stick-slip motion is the most well-known phenomenon in nano-tribology. Maier et al. previously studied the dependency of slip time on contact geometry. In their work, they were able to identify the intermediate state during slip motion. However, detailed study of this intermediate state is difficult due to the fast dynamics. In a friction force microscopy experiment, various parameters, such as surface roughness, temperature, defects, and oxidation condition, affect the tribological behaviors. Hence, current experimental techniques only measure the average or maximum friction and describe the simple shape of stick-slip motion. Molecular dynamics simulation represents an effective solution for this issue. Dong et al. reviewed the molecular dynamics simulation approach with regard to the nano-tribology. The advantage of molecular dynamics simulation is that it can provide detailed information and direct visualization of the tribological phenomena on a time scale of a few nanoseconds. In this study, we investigate the detailed mechanism of stick-slip motion in nanoscale. Molecular dynamics simulation precisely mimics friction force microscopy experiments. In molecular dynamics simulations, a crystalline Si tip slides on a graphene surface, and the tip size is varied. The simulation results provide evidence of the intermediate state during slip motion and reveal the hierarchical structure of the stick-slip motion in nanoscale. Detailed relations among stick-slip motion, contact geometry, and energy state are also analyzed. read less NOT USED (high confidence) J. Shi, K. Cai, and Q. Qin, “A nanoengine governor based on the end interfacial effect,” Nanotechnology. 2016. link Times cited: 7 Abstract: A conceptual design is presented for a nanoengine governor b… read moreAbstract: A conceptual design is presented for a nanoengine governor based on the end interfacial effect of two rotary nanotubes. The governor contains a thermal-driven rotary nanomotor made from double-walled carbon nanotubes (DWCNTs) and a coaxially laid out rotary nanotube near one end of the nanomotor rotor. The rotation of the rotor in the nanomotor can be controlled by two features. One is the stator (the outer tube of DWCNTs) which has some end atoms with inward radial deviation (IRD) on the stator. The other is the relative rotation of the neighboring rotary tube of the rotor. As the configuration of the stator is fixed, the end interfacial interaction between the two rotors will govern the dynamic response of the rotor in the nanomotor system. The obtained results demonstrate that the relative rotational speed between the two rotors provides friction on the rotor in the nanomotor system. In particular, higher relative rotational speed will provide lower friction on rotor 1, which is opposite to that between neighboring shells in DWCNTs. read less NOT USED (high confidence) P. O. Hubin, D. Jacquemin, L. Leherte, and D. P. Vercauteren, “Parameterization of the ReaxFF reactive force field for a proline‐catalyzed aldol reaction,” Journal of Computational Chemistry. 2016. link Times cited: 11 Abstract: A parameterization of the ReaxFF reactive FF is performed us… read moreAbstract: A parameterization of the ReaxFF reactive FF is performed using a Monte Carlo Simulated Annealing procedure for the modeling of a proline‐catalyzed aldol reaction. Emphasis is put on the accurate reproduction of the relative stabilities of several key intermediates of the reaction, as well as, on the description of the reaction path bridging these intermediates based on quantum mechanical calculations. Our training sets include new criteria based on geometry optimizations and short Molecular Dynamics simulations to ensure that the trained ReaxFF potentials adequately predict the structures of all key intermediates. The transferability of the sets of parameters obtained is assessed for various steps of the considered aldol reaction, as well as for different substrates, catalysts, and reagents. This works indeed highlights the challenge of reaching transferable parameters for several reaction steps. © 2016 Wiley Periodicals, Inc. read less NOT USED (high confidence) D. Akinwande et al., “A review on mechanics and mechanical properties of 2D materials—Graphene and beyond,” Extreme Mechanics Letters. 2016. link Times cited: 824 NOT USED (high confidence) L. Bai, N. Srikanth, B. Zhao, B. Liu, Z. Liu, and K. Zhou, “Lubrication mechanisms of graphene for DLC films scratched by a diamond tip,” Journal of Physics D: Applied Physics. 2016. link Times cited: 33 Abstract: The lubrication behavior of graphene for diamond-like carbon… read moreAbstract: The lubrication behavior of graphene for diamond-like carbon (DLC) films scratched by a diamond tip is investigated by molecular dynamics (MD) simulations. Graphene can efficiently lubricate the DLC film, and its lubrication performance can be improved by the increase of its layer number but be degraded by its defects and large size. The friction mechanisms of graphene during its lubrication highly depend on normal force, FN. Under a small FN, a superlow friction force, Ff, is obtained which represents the super-lubrication of graphene. Under a large FN, the Ff increases due to the tribochemical reactions of graphene. Such reactions happen before the rupture of the graphene, which indicates the limitations of the super-lubrication of graphene in realistic situations. read less NOT USED (high confidence) C. Tomas, I. Suarez-Martinez, and N. Marks, “Graphitization of amorphous carbons: A comparative study of interatomic potentials,” Carbon. 2016. link Times cited: 160 NOT USED (high confidence) P. Restuccia, M. Ferrario, P. L. Sivestrelli, G. Mistura, and M. Righi, “Size-dependent commensurability and its possible role in determining the frictional behavior of adsorbed systems.,” Physical chemistry chemical physics : PCCP. 2016. link Times cited: 7 Abstract: Recent nanofriction experiments of xenon on graphene reveale… read moreAbstract: Recent nanofriction experiments of xenon on graphene revealed that the slip onset can be induced by increasing the adsorbate coverage above a critical value, which depends on temperature. Moreover, the xenon slippage on gold is much higher than on graphene in spite of the same physical nature of the interactions. To shed light on these intriguing results we have performed molecular dynamics simulations relying on ab initio derived potentials. By monitoring the interfacial structure factor as a function of coverage and temperature, we show that the key mechanism to interpret the observed frictional phenomena is the size-dependence of the island commensurability. The latter quantity is deeply affected also by the lattice misfit, which explains the different frictional behavior of Xe on graphene and gold. read less NOT USED (high confidence) A. Galashev, “Molecular-dynamic analysis of fast heating of a mercury film on graphene,” High Temperature. 2016. link Times cited: 0 NOT USED (high confidence) K. Li, X. Lin, and J. Greenberg, “Software citation, reuse and metadata considerations: An exploratory study examining LAMMPS,” Proceedings of the Association for Information Science and Technology. 2016. link Times cited: 23 Abstract: Scientific software is as important to scientific studies as… read moreAbstract: Scientific software is as important to scientific studies as raw data. Yet, attention to this genre of research data is limited in studies on data reuse, citation, and metadata standards. This paper presents results from an exploratory study that examined how scientific software's reuse information is presented in the current citation practice and natural language descriptions in research papers. We selected LAMMPS, popular simulation software used in material science, for this study. Both descriptive metadata elements and the types of reuse are examined from a sample of 400 research papers. The results indicate that both descriptive metadata elements and reuse types about LAMMPS are presented in incomplete and inconsistent ways, and this interferes with the values of scientific software, as a type of research data. Our findings necessitate future studies on the metadata standards to facilitate the identification of information related with scientific software reuse. read less NOT USED (high confidence) J.-H. Zou, Z.-Q. Ye, and B. Cao, “Phonon thermal properties of graphene from molecular dynamics using different potentials.,” The Journal of chemical physics. 2016. link Times cited: 67 Abstract: Phonon thermal transport in graphene has attracted significa… read moreAbstract: Phonon thermal transport in graphene has attracted significant interest in recent years. Phonon thermal properties of graphene are investigated by molecular dynamics simulations using the Tersoff, Tersoff-2010, REBO, and AIREBO potentials. By calculating the phonon properties and thermal conductivity of graphene, the performance of the potentials is evaluated based on comparisons with experimental data. It shows that the Tersoff-2010 and REBO display better dispersion curves for graphene than the original Tersoff and AIREBO. The Tersoff-2010 correctly provides the Γ point phonon velocities of the LA and TA branches as well as the G peak frequency with a value of 46 THz. In addition, the acoustic phonon relaxation time derived from the Tersoff-2010 satisfies the ideal relation "τ-1 ∝ ν2." It is also found that the Tersoff-2010 provides the highest graphene thermal conductivity among the used potentials, and estimates about 30.0% contribution for flexural phonons to the total thermal conductivity. By comparison, the Tersoff-2010 potential is demonstrated to be the most suitable one to describe the phonon thermal properties of graphene. read less NOT USED (high confidence) J. Chen, B. Wang, and Y. Hu, “Existence Criterion of Low-Dimensional Materials,” arXiv: Materials Science. 2016. link Times cited: 12 NOT USED (high confidence) M. Friedrich, P. Piovano, and U. Stefanelli, “The Geometry of C_60,” Siam Journal on Applied Mathematics. 2016. link Times cited: 8 Abstract: Molecular Mechanics describes molecules as particle configur… read moreAbstract: Molecular Mechanics describes molecules as particle configurations interacting via classical potentials. These configurational energies usually consist of the sum of different phenomenological terms which are tailored to the description of specific bonding geometries. This approach is followed here to model the fullerene $C_{60}$, an allotrope of carbon corresponding to a specific hollow spherical structure of sixty atoms. We rigorously address different modeling options and advance a set of minimal requirements on the configurational energy able to deliver an accurate prediction of the fine three-dimensional geometry of $C_{60}$ as well as of its remarkable stability. In particular, the experimentally observed truncated-icosahedron structure with two different bond lengths is shown to be a strict local minimizer. read less NOT USED (high confidence) J. Qi and K. Komvopoulos, “A molecular dynamics analysis of ion irradiation of ultrathin amorphous carbon films,” Journal of Applied Physics. 2016. link Times cited: 0 Abstract: Molecular dynamics (MD) simulations provide insight into nan… read moreAbstract: Molecular dynamics (MD) simulations provide insight into nanoscale problems where continuum description breaks down, such as the modeling of ultrathin films. Amorphous carbon (a-C) films are commonly used as protective overcoats in various contemporary technologies, including microelectromechanical systems, bio-implantable devices, optical lenses, and hard-disk drives. In all of these technologies, the protective a-C film must be continuous and very thin. For example, to achieve high storage densities (e.g., on the order of 1 Tb/in.2) in magnetic recording, the thickness of the a-C film used to protect the magnetic media and the recording head against mechanical wear and corrosion must be 2–3 nm. Inert ion irradiation is an effective post-deposition method for reducing the film thickness, while preserving the mechanical and chemical characteristics. In this study, MD simulations of Ar+ ion irradiated a-C films were performed to elucidate the effects of the ion incidence angle and ion kinetic energy on the... read less NOT USED (high confidence) J. Shang, Q. Yang, X.-hui Yan, X. He, and K. Liew, “Ionic Adsorption and Desorption of CNT Nanoropes,” Nanomaterials. 2016. link Times cited: 7 Abstract: A nanorope is comprised of several carbon nanotubes (CNTs) w… read moreAbstract: A nanorope is comprised of several carbon nanotubes (CNTs) with different chiralities. A molecular dynamic model is built to investigate the ionic adsorption and desorption of the CNT nanoropes. The charge distribution on the nanorope is obtained by using a modified gradient method based on classical electrostatic theory. The electrostatic interactions among charged carbon atoms are calculated by using the Coulomb law. It was found here that the charged nanorope can adsorb heavy metal ions, and the adsorption and desorption can be realized by controlling the strength of applied electric field. The distance between the ions and the nanorope as well as the amount of ions have an effect on the adsorption capacity of the nanorope. The desorption process takes less time than that of adsorption. The study indicates that the CNT nanorope can be used as a core element of devices for sewage treatment. read less NOT USED (high confidence) A. Galashev, O. Rakhmanova, and Y. Zaikov, “Defect silicene and graphene as applied to the anode of lithium-ion batteries: Numerical experiment,” Physics of the Solid State. 2016. link Times cited: 15 NOT USED (high confidence) A. Anastasi, K. Ritos, G. Cassar, and M. Borg, “Mechanical properties of pristine and nanoporous graphene,” Molecular Simulation. 2016. link Times cited: 32 Abstract: We present molecular dynamics simulations of monolayer graph… read moreAbstract: We present molecular dynamics simulations of monolayer graphene under uniaxial tensile loading. The Morse, bending angle, torsion and Lennard-Jones potential functions are adopted within the mdFOAM library in the OpenFOAM software, to describe the molecular interactions in graphene. A well-validated graphene model using these set of potentials is not yet available. In this work, we investigate the accuracy of the mechanical properties of graphene when derived using these simpler potentials, compared to the more commonly used complex potentials such as the Tersoff-Brenner and AIREBO potentials. The computational speed up of our approach, which scales O(1.5N), where N is the number of carbon atoms, enabled us to vary a larger number of system parameters, including graphene sheet orientation, size, temperature and concentration of nanopores. The resultant effect on the elastic modulus, fracture stress and fracture strain is investigated. Our simulations show that graphene is anisotropic, and its mechanical properties are dependant on the sheet size. An increase in system temperature results in a significant reduction in the fracture stress and strain. Simulations of nanoporous graphene were created by distributing vacancy defects, both randomly and uniformly, across the lattice. We find that the fracture stress decreases substantially with increasing defect density. The elastic modulus was found to be constant up to around 5% vacancy defects, and decreases for higher defect densities. read less NOT USED (high confidence) K. Xia, H. Zhan, D. Hu, and Y. T. Gu, “Failure mechanism of monolayer graphene under hypervelocity impact of spherical projectile,” Scientific Reports. 2016. link Times cited: 37 NOT USED (high confidence) S. Winczewski, J. Dziedzic, and J. Rybicki, “Central-force decomposition of spline-based modified embedded atom method potential,” Modelling and Simulation in Materials Science and Engineering. 2016. link Times cited: 0 Abstract: Central-force decompositions are fundamental to the calculat… read moreAbstract: Central-force decompositions are fundamental to the calculation of stress fields in atomic systems by means of Hardy stress. We derive expressions for a central-force decomposition of the spline-based modified embedded atom method (s-MEAM) potential. The expressions are subsequently simplified to a form that can be readily used in molecular-dynamics simulations, enabling the calculation of the spatial distribution of stress in systems treated with this novel class of empirical potentials. We briefly discuss the properties of the obtained decomposition and highlight further computational techniques that can be expected to benefit from the results of this work. To demonstrate the practicability of the derived expressions, we apply them to calculate stress fields due to an edge dislocation in bcc Mo, comparing their predictions to those of linear elasticity theory. read less NOT USED (high confidence) Z. Bai, L. Zhang, H. Li, and L. Liu, “Nanopore Creation in Graphene by Ion Beam Irradiation: Geometry, Quality, and Efficiency.,” ACS applied materials & interfaces. 2016. link Times cited: 56 Abstract: Ion beam irradiation is a promising approach to fabricate na… read moreAbstract: Ion beam irradiation is a promising approach to fabricate nanoporous graphene for various applications, including DNA sequencing, water desalination, and phase separation. Further advancement of this approach and rational design of experiments all require improved mechanistic understanding of the physical drilling process. Here, we demonstrate that, by using oblique ion beam irradiation, the nanopore family is significantly expanded to include more types of nanopores of tunable geometries. With the hopping, sweeping, and shoving mechanisms, ions sputter carbon atoms even outside the ion impact zone, leading to extended damage particularly at smaller incident angles. Moreover, with lower energies, ions may be absorbed to form complex ion-carbon structures, making the graphene warped or curly at pore edges. Considering both efficiency and quality, the optimal ion energy is identified to be 1000 eV at an incident angle of 30° with respect to the graphene sheet and 400-500 eV at higher incident angles. All of these results suggest the use of oblique ion beam and moderate energy levels to efficiently fabricate high-quality nanopores of tunable geometries in graphene for a wide range of applications. read less NOT USED (high confidence) A. Nobakht and S. Shin, “Anisotropic control of thermal transport in graphene/Si heterostructures,” Journal of Applied Physics. 2016. link Times cited: 39 Abstract: The cross-plane interaction across interface changes phonon … read moreAbstract: The cross-plane interaction across interface changes phonon kinetics and spectrum near the interface, and the interaction effects on both in-plane and cross-plane thermal transport are investigated in graphene/Si heterostructure. The interaction with substrates dramatically reduces the in-plane thermal conductivity of graphene by changing the behaviors of the out-of-plane phonons as well as adding phonon-substrate scatterings. Applying pressure up to 2.6 GPa to the sandwiched graphene reduces the cross-plane interfacial thermal resistance by 50% without altering the in-plane thermal conductivity in a significant way. The pressure increases the inter-layer coupling and creates a low-energy phonon transport channel between graphene and Si with minor effects on phonons propagating along the graphene. This study suggests the anisotropic control of thermal transport, and the physics and calculation results can be used to improve the thermal design and analysis in two-dimensional nano-electronic devices. read less NOT USED (high confidence) Z. Chao, M. Fei, M. Xiangrui, P. Chengling, and S. Shaoding, “Collision Dynamics of an Energetic Carbon Ion Impinging on the Stone-Wales Defect in a Single-walled Carbon Nanotube,” Chemical Research in Chinese Universities. 2016. link Times cited: 0 NOT USED (high confidence) E. Y. Pashkin et al., “The unexpected stability of multiwall nanotubes under high pressure and shear deformation,” Applied Physics Letters. 2016. link Times cited: 18 Abstract: The behavior of multiwall carbon nanotubes under a high pres… read moreAbstract: The behavior of multiwall carbon nanotubes under a high pressure (up to 55 GPa) combined with shear deformation was studied by experimental and theoretical methods. The unexpectedly high stability of the nanotubes'
structure under high stresses was observed. After the pressure was released, we observed that the nanotubes had restored their shapes. Atomistic simulations show that the hydrostatic and shear stresses affect the nanotubes'
structure in a different way. It was found that the shear stress load in the multiwall nanotubes' outer walls can induce their connection and formation of an amorphized sp
3-hybridized region but internal core keeps the tubular structure. read less NOT USED (high confidence) K.-J. Yoon et al., “Atomistic-Scale Simulations of Defect Formation in Graphene under Noble Gas Ion Irradiation.,” ACS nano. 2016. link Times cited: 108 Abstract: Despite the frequent use of noble gas ion irradiation of gra… read moreAbstract: Despite the frequent use of noble gas ion irradiation of graphene, the atomistic-scale details, including the effects of dose, energy, and ion bombardment species on defect formation, and the associated dynamic processes involved in the irradiations and subsequent relaxation have not yet been thoroughly studied. Here, we simulated the irradiation of graphene with noble gas ions and the subsequent effects of annealing. Lattice defects, including nanopores, were generated after the annealing of the irradiated graphene, which was the result of structural relaxation that allowed the vacancy-type defects to coalesce into a larger defect. Larger nanopores were generated by irradiation with a series of heavier noble gas ions, due to a larger collision cross section that led to more detrimental effects in the graphene, and by a higher ion dose that increased the chance of displacing the carbon atoms from graphene. Overall trends in the evolution of defects with respect to a dose, as well as the defect characteristics, were in good agreement with experimental results. Additionally, the statistics in the defect types generated by different irradiating ions suggested that the most frequently observed defect types were Stone-Thrower-Wales (STW) defects for He(+) irradiation and monovacancy (MV) defects for all other ion irradiations. read less NOT USED (high confidence) J. A. D. L. Rosa-Abad, G. J. Soldano, S. Mejía-Rosales, and M. Mariscal, “Immobilization of Au nanoparticles on graphite tunnels through nanocapillarity,” RSC Advances. 2016. link Times cited: 11 Abstract: Atomistic computer simulations on the generation of nanotunn… read moreAbstract: Atomistic computer simulations on the generation of nanotunnels on graphite and the subsequent immobilization of gold nanoparticles are presented in this work. A Morse potential dependent on the coordination of carbon atoms was parameterized based on density functional theory including long dispersion forces. The set up chosen is such that a direct comparison with the experiments is possible. The model is able to reproduce crucial experimental aspects such as the phenomena of capillarity and the final height of the immobilized nanoparticle. Results presented here can inspire the design of new platforms for protein immobilizations. read less NOT USED (high confidence) K. Cai, J.-zhou Yu, L. Liu, J. Shi, and Q. Qin, “Rotation measurements of a thermally driven rotary nanomotor with a spring wing.,” Physical chemistry chemical physics : PCCP. 2016. link Times cited: 24 Abstract: Due to the extremely small dimensions and super high frequen… read moreAbstract: Due to the extremely small dimensions and super high frequency of the rotor in a thermally driven rotary nanomotor made from carbon nanostructures, measuring the rotational frequency of the nanomotor is still an open issue. To this end, a measuring system is constructed in which a spring wing is connected with the rotor to provide collisions with a probe tip whose deflection reflects the rotational frequency of the rotor. The spring wing is formed by connecting an end-tube from a carbon nanotube and a graphene with differently hydrogenated surfaces. Due to the alternative hydrogenation of the two surfaces, the graphene shrinks like a spring. When the rotational frequency increases, the centrifugal force applied on the wing increases and then the spring is stretched (becoming longer). As the end-tube rotates with the rotor and reaches the probe tip, a collision occurs between the end-tube and the probe tip. After collision, the probe tip undergoes a variation of vertical deflection that can be measured through atomic force microscopy. The relation between the maximal deflection of the probe tip and the rotational frequency of the rotor is determined via numerical experiments. The effects of the configuration (namely hydrogenation and length) of graphene on the rotation of the rotor are investigated. The results provide some insight into the fabrication of nanomachines. read less NOT USED (high confidence) H. Nishizawa, Y. Nishimura, M. Kobayashi, S. Irle, and H. Nakai, “Three pillars for achieving quantum mechanical molecular dynamics simulations of huge systems: Divide‐and‐conquer, density‐functional tight‐binding, and massively parallel computation,” Journal of Computational Chemistry. 2016. link Times cited: 68 Abstract: The linear‐scaling divide‐and‐conquer (DC) quantum chemical … read moreAbstract: The linear‐scaling divide‐and‐conquer (DC) quantum chemical methodology is applied to the density‐functional tight‐binding (DFTB) theory to develop a massively parallel program that achieves on‐the‐fly molecular reaction dynamics simulations of huge systems from scratch. The functions to perform large scale geometry optimization and molecular dynamics with DC‐DFTB potential energy surface are implemented to the program called DC‐DFTB‐K. A novel interpolation‐based algorithm is developed for parallelizing the determination of the Fermi level in the DC method. The performance of the DC‐DFTB‐K program is assessed using a laboratory computer and the K computer. Numerical tests show the high efficiency of the DC‐DFTB‐K program, a single‐point energy gradient calculation of a one‐million‐atom system is completed within 60 s using 7290 nodes of the K computer. © 2016 Wiley Periodicals, Inc. read less NOT USED (high confidence) J. Ewen, C. Gattinoni, F. Thakkar, N. Morgan, H. Spikes, and D. Dini, “Nonequilibrium Molecular Dynamics Investigation of the Reduction in Friction and Wear by Carbon Nanoparticles Between Iron Surfaces,” Tribology Letters. 2016. link Times cited: 46 NOT USED (high confidence) S. Skowron et al., “Reaction kinetics of bond rotations in graphene,” Carbon. 2016. link Times cited: 18 NOT USED (high confidence) M. Gatchell and H. Zettergren, “Knockout driven reactions in complex molecules and their clusters,” Journal of Physics B: Atomic, Molecular and Optical Physics. 2016. link Times cited: 54 Abstract: Energetic ions lose some of their kinetic energy when intera… read moreAbstract: Energetic ions lose some of their kinetic energy when interacting with electrons or nuclei in matter. Here, we discuss combined experimental and theoretical studies on such impulse driven reactions in polycyclic aromatic hydrocarbons (PAHs), fullerenes, and pure or mixed clusters of these molecules. These studies show that the nature of excitation is important for how complex molecular systems respond to ion/atom impact. Rutherford-like nuclear scattering processes may lead to prompt atom knockout and formation of highly reactive fragments, while heating of the molecular electron clouds in general lead to formation of more stable and less reactive fragments. In this topical review, we focus on recent studies of knockout driven reactions, and present new calculations of the angular dependent threshold (displacement) energies for such processes in PAHs. The so-formed fragments may efficiently form covalent bonds with neighboring molecules in clusters. These unique molecular growth processes may be important in astrophysical environments such as low velocity shock waves. read less NOT USED (high confidence) Z. Yao et al., “Stable single helical C- and I-chains inside single-walled carbon nanotubes*,” Chinese Physics B. 2016. link Times cited: 0 Abstract: The helicity of stable single helical carbon chains and iodi… read moreAbstract: The helicity of stable single helical carbon chains and iodine chains inside single-walled carbon nanotubes (SWCNTs) is studied by calculating the systematic van der Waals interaction energy. The results show that the optimal helical radius increases linearly with increasing tube radius, which produces a constant separation between the chain structure and the tube wall. The helical angle exhibits a ladder-like decrease with increasing tube radius, indicating that a large tube can produce a small helicity in the helical structures. read less NOT USED (high confidence) K. Cai, J. Wan, L. Yang, N. Wei, J. Shi, and Q. Qin, “Buckling behaviour of composites with double walled nanotubes from carbon and phosphorus.,” Physical chemistry chemical physics : PCCP. 2016. link Times cited: 14 Abstract: Due to weak interactions among phosphorus atoms in black pho… read moreAbstract: Due to weak interactions among phosphorus atoms in black phosphorene, a nanotube obtained by curling single-layer black phosphorus is not as stable as a carbon nanotube (CNT) at finite temperature. In the present work, we recommend a new 1D composite material with a double-walled nanotube (DWNT) from a black phosphorus nanotube (BPNT) and a CNT. The dynamic response of the composite DWNTs is simulated using a molecular dynamics approach. Effects of the factors including temperature, slenderness and configurations of DWNTs on dynamic behavior of the composite are discussed. Compared with a single-walled BPNT, the composite DWNTs under uniaxial compression show some unique properties. When a BPNT is embedded in a CNT which will not only isolate the BPNT from the ambient conditions, but also improve the capability of axial deformation of the BPNT, the system will not collapse rapidly even if the BPNT has been buckled. read less NOT USED (high confidence) B. Mortazavi, Z. Fan, Z. Fan, L. Pereira, A. Harju, and T. Rabczuk, “Amorphized graphene: A stiff material with low thermal conductivity,” Carbon. 2016. link Times cited: 74 NOT USED (high confidence) D. Lisovenko, J. Baimova, L. Rysaeva, V. Gorodtsov, A. Rudskoy, and S. Dmitriev, “Equilibrium diamond‐like carbon nanostructures with cubic anisotropy: Elastic properties,” physica status solidi (b). 2016. link Times cited: 34 Abstract: Diamond‐like carbon nanostructures with cubic anisotropy mad… read moreAbstract: Diamond‐like carbon nanostructures with cubic anisotropy made by joining fullerene‐like molecules of different types via valence bonds are studied by means of molecular dynamics simulations. The considered structures are interesting because they include both sp2 ‐ and sp3 ‐hybridized carbon atoms, which lead to their distinct properties compared to the structures with one type of hybridization. Seven diamond‐like carbon phases having different shapes of structural units and/or different ways of their connection are studied in the present work. For the relaxed equilibrium structures, the engineering elastic constants (Poisson's ratio, Young's modulus, and shear modulus) are calculated as the functions of the crystal orientation angles. Extreme values of the elastic constants are reported. It is shown that two of the considered diamond‐like structures have negative Poisson's ratio and can be regarded as the partial auxetics. According to the results of the present study, elastic properties of the bulk diamond‐like carbon structures can vary considerably depending on their structure. read less NOT USED (high confidence) L. Guin, J. Raphanel, and J. Kysar, “Atomistically derived cohesive zone model of intergranular fracture in polycrystalline graphene,” Journal of Applied Physics. 2016. link Times cited: 17 Abstract: Pristine single crystal graphene is the strongest known two-… read moreAbstract: Pristine single crystal graphene is the strongest known two-dimensional material, and its nonlinear anisotropic mechanical properties are well understood from the atomic length scale up to a continuum description. However, experiments indicate that grain boundaries in the polycrystalline form reduce the mechanical behavior of polycrystalline graphene. Herein, we perform atomistic-scale molecular dynamics simulations of the deformation and fracture of graphene grain boundaries and express the results as continuum cohesive zone models (CZMs) that embed notions of the grain boundary ultimate strength and fracture toughness. To facilitate energy balance, we employ a new methodology that simulates a quasi-static controlled crack propagation which renders the kinetic energy contribution to the total energy negligible. We verify good agreement between Griffith's critical energy release rate and the work of separation of the CZM, and we note that the energy of crack edges and fracture toughness differs by about 3... read less NOT USED (high confidence) E. Voyiatzis and M. Böhm, “Atomic and global mechanical properties of systems described by the Stillinger–Weber potential,” Journal of Physics: Condensed Matter. 2016. link Times cited: 0 Abstract: Analytical expressions for the stress and elasticity tensors… read moreAbstract: Analytical expressions for the stress and elasticity tensors of materials, in which the interactions are described by the Stillinger–Weber potential, are derived in the context of the stress fluctuation formalism. The derived formulas can be used both in Monte Carlo and molecular dynamics simulations. As an example of possible applications, they are employed to calculate the influence of the temperature and system size on the mechanical properties of crystalline cubic boron nitride. The system has been studied by molecular dynamics simulations. The computed mechanical properties are in good agreement with available experimental data and first principle calculations. In the studied crystalline cubic boron nitride system, the employed formalism is of higher accuracy than the ‘small-strain’ non-equilibrium method. The dominant contributions to the elastic constants stem from the Born and stress fluctuation terms. An increase in the system size reduces the statistical uncertainties in the computation of the mechanical properties. A rise of the temperature leads to a slight increase in the observed uncertainties. The derived expressions for the stress and elasticity tensors are further decomposed into sums of atomic level stress and atomic level elasticity tensors. The developed factorization enables us (i) to quantify the contribution of the various chemical groups, in the case under consideration of the different atoms, to the observed mechanical properties and (ii) to determine the elastic constants with reduced computational uncertainties. The reason is that the exact values of some terms of the proposed factorization can be determined theoretically beforehand. Thus, they can be substituted in the derived formulas leading to an enhanced convergence. read less NOT USED (high confidence) J. Baimova, R. Murzaev, I. Lobzenko, S. V. Dmitriev, and K. Zhou, “Discrete breathers in graphane: Effect of temperature,” Journal of Experimental and Theoretical Physics. 2016. link Times cited: 16 NOT USED (high confidence) Z. K. Kok and C. Wong, “Molecular dynamics simulation studies of mechanical properties of different carbon nanotube systems,” Molecular Simulation. 2016. link Times cited: 17 Abstract: Various mechanical properties of single-walled carbon nanotu… read moreAbstract: Various mechanical properties of single-walled carbon nanotubes (SWCNT) and double-walled carbon nanotubes (DWCNT) are evaluated using molecular dynamics (MD) simulations. A tensioning process was first performed on a SWCNT whose interaction is based on the Brenner’s ‘second generation’ potential under varying length–diameter ratios and strain rates, in order to understand the SWCNT’s behaviour under axial tension. The results showed an increase in the SWCNT’s ultimate tensile strength and a decrease in critical strain given the conditions of increasing strain rate and a decreasing length–diameter ratio. Comparison was done with previous studies on axial tensioning of SWCNT to validate the results obtained from the set-up, based on the general stress–strain relationship and key mechanical properties such as the strain at failure and the Young’s modulus. A DWCNT was then constructed, and Lennard-Jones ‘12-6’ potential was used to describe the energy present between the nanotube layers. Extraction of the inner tube in a DWCNT was performed using two inner wall tubings of different diameters to draw comparison to the energies needed to separate fully the outer and inner tubing. Finally, a bending test was performed on two DWCNTs with different intertube separations. Insights into the entire bending process were obtained through analyses of the variations in the strain energy characteristic of the surface atoms near the bending site, as the DWCNT is gradually bent until failure. read less NOT USED (high confidence) L. Pereira, B. Mortazavi, M. Makaremi, and T. Rabczuk, “Anisotropic thermal conductivity and mechanical properties of phagraphene: a molecular dynamics study,” RSC Advances. 2016. link Times cited: 62 Abstract: Phagraphene is a novel 2D carbon allotrope with interesting … read moreAbstract: Phagraphene is a novel 2D carbon allotrope with interesting electronic properties which has been recently theoretically proposed. Phagraphene is similar to a defective graphene structure with an arrangement of pentagonal, heptagonal and hexagonal rings. In this study we investigate the thermal conductivity and mechanical properties of phagraphene using molecular dynamics simulations. Using the non-equilibrium molecular dynamics method, we found the thermal conductivity of phagraphene to be anisotropic, with room temperature values of 218 ± 20 W m−1 K−1 along the armchair direction and 285 ± 29 W m−1 K−1 along the zigzag direction. Both values are one order of magnitude smaller than for pristine graphene. The analysis of the phonon group velocities also shows a significant reduction in this quantity for phagraphene in comparison to graphene. By performing uniaxial tensile simulations, we studied the deformation process and mechanical response of phagraphene. We found that phagraphene exhibits a remarkable high tensile strength around 85 ± 2 GPa, whereas its elastic modulus is also anisotropic along the in-plane directions, with values of 870 ± 15 GPa and 800 ± 14 GPa for the armchair and zigzag directions, respectively. The lower thermal conductivity of phagraphene along with its predicted electronic properties suggests that it could be a better candidate than graphene in future carbon-based thermoelectric devices. read less NOT USED (high confidence) X. Ou, Q. Han, and C. H. Wang, “Molecular dynamics analysis on tensile properties of carbon nanotubes with different cracks,” Molecular Simulation. 2016. link Times cited: 4 Abstract: Molecular dynamics simulation is employed for the axial tens… read moreAbstract: Molecular dynamics simulation is employed for the axial tension of single-walled carbon nanotubes (SWCNTs) with different cracks. The cracks of SWCNTs in this study actually are the crack-like defects. AIREBO potential is used to simulate the interactions among carbon atoms. The effects of the crack length, temperature, strain rate and tube diameter on the mechanical properties of SWCNTs are studied. It is found that the failure stress and failure strain decrease with the increase of crack length. And the results show that the failure stress and failure strain are related to the applied strain rate and affected by temperature especially by lower temperature. It is also revealed that the failure stress increases with the increase in tube diameter. The deformation behaviours of SWCNTs are also obtained. read less NOT USED (high confidence) A. Pham, M. Barisik, and B. H. Kim, “Interfacial thermal resistance between the graphene-coated copper and liquid water,” International Journal of Heat and Mass Transfer. 2016. link Times cited: 40 NOT USED (high confidence) J. Xia, X. Liu, W. Zhou, F. Wang, and H. Wu, “Transformation between divacancy defects induced by an energy pulse in graphene,” Nanotechnology. 2016. link Times cited: 8 Abstract: The mutual transformations among the four typical divacancy … read moreAbstract: The mutual transformations among the four typical divacancy defects induced by a high-energy pulse were studied via molecular dynamics simulation. Our study revealed all six possible mutual transformations and found that defects transformed by absorbing energy to overcome the energy barrier with bonding, debonding, and bond rotations. The reversibility of defect transformations was also investigated by potential energy analysis. The energy difference was found to greatly influence the transformation reversibility. The direct transformation path was irreversible if the energy difference was too large. We also studied the correlation between the transformation probability and the input energy. It was found that the transformation probability had a local maxima at an optimal input energy. The introduction of defects and their structural evolutions are important for tailoring the exceptional properties and thereby performances of graphene-based devices, such as nanoporous membranes for the filtration and desalination of water. read less NOT USED (high confidence) N. Manini et al., “Friction and nonlinear dynamics,” Journal of Physics: Condensed Matter. 2016. link Times cited: 22 Abstract: The nonlinear dynamics associated with sliding friction form… read moreAbstract: The nonlinear dynamics associated with sliding friction forms a broad interdisciplinary research field that involves complex dynamical processes and patterns covering a broad range of time and length scales. Progress in experimental techniques and computational resources has stimulated the development of more refined and accurate mathematical and numerical models, capable of capturing many of the essentially nonlinear phenomena involved in friction. read less NOT USED (high confidence) R. M. Couto and N. Silvestre, “Finite Element Modelling and Mechanical Characterization of Graphyne,” Journal of Nanomaterials. 2016. link Times cited: 39 Abstract: Graphyne is an allotrope of carbon with excellent mechanical… read moreAbstract: Graphyne is an allotrope of carbon with excellent mechanical, electrical, and optical properties. The scientific community has been increasingly interested in its characterization and computational simulation, using molecular dynamics (MD) simulations and density functional theory (DFT). The present work presents, for the first time (to the authors’ knowledge), a finite element (FE) model to evaluate the elastic properties of graphyne. After presenting a brief literature review on the latest developments of graphyne and its mechanical characterization through computational methods, the FE model of graphyne sheet is presented in detail and the calculation of its elastic properties described. The linear elastic properties (Young’s modulus, Poisson’s ratio, bulk modulus, and shear modulus) obtained from the proposed FE models are in general agreement with those previously obtained by other authors using more complex computational models (MD and DFT). The influence of van der Waals (vdW) interatomic forces on the linear elastic properties of planar graphyne is negligible and can be disregarded if small strain hypothesis is adopted. The FE models also show that graphyne exhibits marginal orthotropic behavior, that is, “quasi-isotropic” behavior, a fact that agrees with the conclusions reported by other researchers. read less NOT USED (high confidence) O. Glukhova, V. A. Kondrashov, V. Nevolin, I. I. Bobrinetsky, G. V. Savostyanov, and M. Slepchenkov, “Prediction of the stability and electronic properties of carbon nanotori synthesized by a high-voltage pulsed discharge in ethanol vapor,” Semiconductors. 2016. link Times cited: 4 NOT USED (high confidence) I. Giordanelli, M. Mendoza, J. S. A. Jr., M. Gomes, and H. Herrmann, “Crumpling Damaged Graphene,” Scientific Reports. 2016. link Times cited: 12 NOT USED (high confidence) M. Stepanova, K. S. Shefov, and S. Slavyanov, “Multifactorial global search algorithm in the problem of optimizing a reactive force field,” Theoretical and Mathematical Physics. 2016. link Times cited: 5 NOT USED (high confidence) T. Panczyk, P. Wolski, and L. Lajtar, “Coadsorption of Doxorubicin and Selected Dyes on Carbon Nanotubes. Theoretical Investigation of Potential Application as a pH-Controlled Drug Delivery System.,” Langmuir : the ACS journal of surfaces and colloids. 2016. link Times cited: 57 Abstract: This work shows results of a theoretical survey, based on mo… read moreAbstract: This work shows results of a theoretical survey, based on molecular dynamics simulation, of potential applicability of doxorubicin coadsorption with various dyes molecules on/in carbon nanotubes as a drug delivery system. The central idea is to take advantage of the dyes charge distribution change upon switching the pH of the environment from neutral (physiological 7.4) to acidic one (∼5.5 which is typical for tumor tissues). This work discusses results obtained for four dye molecules revealing more or less interesting behavior. These were bromothymol blue, methyl red, neutral red, and p-phenylenediamine. All of them reveal pKa in the range 5-7 and thus will undergo protonation in that pH range. We considered coadsorption on external walls of carbon nanotubes and sequential filling of the nanotubes inner hollow space by drug and dyes. The latter approach, with the application of neutral red and p-phenylenediamine as blockers of doxorubicin, led to the most promising results. Closer analysis of these systems allowed us to state that neutral red can be particularly useful as a long-term blocker of doxorubicin encapsulated in the inner cavity of (30,0) carbon nanotube at neutral pH. At acidic pH we observed a spontaneous release of neutral red from the nanotube and unblocking of doxorubicin. We also confirmed, by analysis of free energy profiles, that unblocked doxorubicin can spontaneously leave the nanotube interior at the considered conditions. Thus, that system can realize pH controlled doxorubicin release in acidic environment of tumor tissues. read less NOT USED (high confidence) J. Huang, “Atomistic analyses of mechanical properties of graphene sheet.” 2016. link Times cited: 0 NOT USED (high confidence) X. Yang, Y. Huang, L. Wang, B. Cao, and A. To, “Formation of single carbon chain bridging two SWCNTs via tensile deformation of nanobud junction,” Materials & Design. 2016. link Times cited: 4 NOT USED (high confidence) B. Mas et al., “Group 16 elements control the synthesis of continuous fibers of carbon nanotubes,” Carbon. 2016. link Times cited: 25 NOT USED (high confidence) N. Orekhov and V. Stegailov, “Simulation of the adhesion properties of the polyethylene/carbon nanotube interface,” Polymer Science Series A. 2016. link Times cited: 7 NOT USED (high confidence) W. Wang, Q. Peng, Q. Peng, Y. Dai, Z. Qian, and S. Liu, “Distinctive nanofriction of graphene coated copper foil,” Computational Materials Science. 2016. link Times cited: 37 NOT USED (high confidence) A. Ito and S. Okamoto, “Effects of Vacancies, Nitrogen Atoms, and sp Bonds on Mechanical Properties of Graphene Using Molecular Dynamics Simulations.” 2016. link Times cited: 0 Abstract: Mechanical properties of graphene containing atomic size def… read moreAbstract: Mechanical properties of graphene containing atomic size defects, such as vacancy, nitrogen atom, and sp 3 bond are discussed in this chapter. Molecuar dynamics (MD) simulations on tensile and shear loadings of defective graphene were performed to estimate the mechanical properties, such as strength and modulus. We showed the usefulness of MD simulation for understanding the relationship between nano-structures and mechanical properties. read less NOT USED (high confidence) Z. Bai, L. Zhang, and L. Liu, “Improving low-energy boron/nitrogen ion implantation in graphene by ion bombardment at oblique angles.,” Nanoscale. 2016. link Times cited: 31 Abstract: Ion implantation is a widely adopted approach to structurall… read moreAbstract: Ion implantation is a widely adopted approach to structurally modify graphene and tune its electrical properties for a variety of applications. Further development of the approach requires a fundamental understanding of the mechanisms that govern the ion bombardment process as well as establishment of key relationships between the controlling parameters and the dominant physics. Here, using molecular dynamics simulations with adaptive bond order calculations, we demonstrate that boron and nitrogen ion bombardment at oblique angles (particularly at 70°) can improve both the productivity and quality of perfect substitution by over 25%. We accomplished this by systematically analyzing the effects of the incident angle and ion energy in determining the probabilities of six distinct types of physics that may occur in an ion bombardment event, including reflection, absorption, substitution, single vacancy, double vacancy, and transmission. By analyzing the atomic trajectories from 576,000 simulations, we identified three single vacancy creation mechanisms and four double vacancy creation mechanisms, and quantified their probability distributions in the angle-energy space. These findings further open the door for improved control of ion implantation towards a wide range of applications of graphene. read less NOT USED (high confidence) M. Friedrich, P. Piovano, and U. Stefanelli, “The Geometry of C60: A Rigorous Approach via Molecular Mechanics,” SIAM J. Appl. Math. 2016. link Times cited: 5 Abstract: Molecular Mechanics describes molecules as particle configur… read moreAbstract: Molecular Mechanics describes molecules as particle configurations interacting via classical potentials. These {\it configurational energies} usually consist of the sum of different phenomenological terms which are tailored to the description of specific bonding geometries. This approach is followed here to model the fullerene $C_{60}$, an allotrope of carbon corresponding to a specific hollow spherical structure of sixty atoms. We rigorously address different modeling options and advance a set of minimal requirements on the configurational energy able to deliver an accurate prediction of the fine three-dimensional geometry of $C_{60}$ as well as of its remarkable stability. In particular, the experimentally observed truncated-icosahedron structure with two different bond lengths is shown to be a strict local minimizer. read less NOT USED (high confidence) M. Stepanova, K. S. Shefov, and S. Slavyanov, “Multifactorial global search algorithm in the problem of optimizing a reactive force field,” Theoretical and Mathematical Physics. 2016. link Times cited: 0 NOT USED (high confidence) K.-J. Yoon, A. Ostadhossein, and A. Duin, “Atomistic-scale simulations of the chemomechanical behavior of graphene under nanoprojectile impact,” Carbon. 2016. link Times cited: 82 NOT USED (high confidence) Z. Zheng, J. Shen, J. Liu, Y. Wu, L. Zhang, and W. Wang, “Tuning the visco-elasticity of elastomeric polymer materials via flexible nanoparticles: insights from molecular dynamics simulation,” RSC Advances. 2016. link Times cited: 16 Abstract: Tuning the viscoelasticity of polymeric materials by incorpo… read moreAbstract: Tuning the viscoelasticity of polymeric materials by incorporating nanoparticles (NPs) has received considerable scientific and technological interests. Contrary to increasing the energy dissipation for damping materials, here we direct our attention to study how to decrease the energy dissipation of elastomer nanocomposites (ENCs) under periodic dynamic loading–unloading cycles. Through molecular dynamics simulation, we firstly simulate the pure cis-polybutadiene (cis-PB) system, by calculating the mean-squared end-to-end distance and the radius of gyration as a function of the chain length, the diffusion coefficient of polymer chains as a function of the temperature, the glass transition temperature, the stress–strain curves at different strain rates and temperatures, the tension–recovery and compression–recovery curves at various cross-linking densities. These results validate the accuracy of the united atom model and force-field of cis-PB. Then we show that the incorporation of flexible nanoparticles (NPs) such as graphene nanoribbons and carbon nanotubes can effectively decrease the dynamic hysteresis loss, by taking advantage of the reversible mechanical deformation of the anisotropic NPs. This effect can be further strengthened by the stronger interfacial interaction, higher loading and larger size of this kind of NPs. The underlying reason stems from the synergistic motion between the NPs and their surrounding polymer chains, leading to much smaller internal friction. This work may open up potential opportunities to fabricate high-performance polymer nanocomposites, such as energy-saving ENCs tailored for tire tread. read less NOT USED (high confidence) K. Cai, H. Cai, L. Ren, J. Shi, and Q. Qin, “Over-Speeding Rotational Transmission of a Carbon Nanotube-Based Bearing,” Journal of Physical Chemistry C. 2016. link Times cited: 29 Abstract: In studying the rotational transmission behavior of a carbon… read moreAbstract: In studying the rotational transmission behavior of a carbon nanotube-based bearing (e.g., (5, 5)/(10, 10)) driven by a CNT motor (e.g., (9, 9)) at finite temperature, one can find that the rotor has different dynamic states from the motor at different environmental condition. In particular, the rotor can be in the overspeeding rotational transmission (ORT) state, in which the rotational speed of the rotor is higher than that of the motor. If we change the rotational frequency of the motor (e.g., >100 GHz) and the curved angle of the rotor, the bearing can reach the ORT state. Besides, in the ORT state, the ratio of the rotor’s rotational speed over that of the motor will be not higher than the ratio of the motor’s radius over that of the rotor. There are two major reasons that result in the bearing to the ORT state. One is that the thermal vibration of atoms between the carbon–hydrogen (C–H) end of the motor and that of the rotor has a drastic collision when the motor is in a high rotational speed. The c... read less NOT USED (high confidence) G. Kedziora, S. Barr, R. Berry, J. Moller, and T. Breitzman, “Bond breaking in stretched molecules: multi-reference methods versus density functional theory,” Theoretical Chemistry Accounts. 2016. link Times cited: 27 NOT USED (high confidence) S. K. Jalali, E. Jomehzadeh, N. Pugno, N. Pugno, and N. Pugno, “Influence of out-of-plane defects on vibration analysis of graphene: Molecular Dynamics and Non-local Elasticity approaches,” Superlattices and Microstructures. 2016. link Times cited: 19 NOT USED (high confidence) M. Pykal, P. Jurečka, F. Karlický, and M. Otyepka, “Modelling of graphene functionalization.,” Physical chemistry chemical physics : PCCP. 2016. link Times cited: 157 Abstract: Graphene has attracted great interest because of its remarka… read moreAbstract: Graphene has attracted great interest because of its remarkable properties and numerous potential applications. A comprehensive understanding of its structural and dynamic properties and those of its derivatives will be required to enable the design and optimization of sophisticated new nanodevices. While it is challenging to perform experimental studies on nanoscale systems at the atomistic level, this is the 'native' scale of computational chemistry. Consequently, computational methods are increasingly being used to complement experimental research in many areas of chemistry and nanotechnology. However, it is difficult for non-experts to get to grips with the plethora of computational tools that are available and their areas of application. This perspective briefly describes the available theoretical methods and models for simulating graphene functionalization based on quantum and classical mechanics. The benefits and drawbacks of the individual methods are discussed, and we provide numerous examples showing how computational methods have provided new insights into the physical and chemical features of complex systems including graphene and graphene derivatives. We believe that this overview will help non-expert readers to understand this field and its great potential. read less NOT USED (high confidence) K. Krylova, Y. A. Baimova, S. Dmitriev, and R. Mulyukov, “Calculation of the structure of carbon clusters based on fullerene-like C24 and C48 molecules,” Physics of the Solid State. 2016. link Times cited: 22 NOT USED (high confidence) B. L. Mooney et al., “Elucidating the Properties of Surrogate Fuel Mixtures Using Molecular Dynamics,” Energy & Fuels. 2016. link Times cited: 14 Abstract: The wide compositional differences between conventional and … read moreAbstract: The wide compositional differences between conventional and alternative fuels have resulted in much research aimed at determining which alternative fuels can be used, and in what proportions, in conventional engines. Atomic-scale modeling is uniquely positioned to lend insight into this question without extensive large-scale tests. The predictive power such modeling affords could narrow the phase space that must be examined experimentally. This study utilizes molecular dynamics (MD) simulations to predict the properties of a set of pure hydrocarbons, as well as binary and multicomponent surrogate fuel mixtures for alternative fuels created from these pure components. The accuracy and transferability of the modified Lennard-Jones adaptive intermolecular reactive empirical bond-order potential (mod-LJ AIREBO) [Liu, A.; Stuart, S. J. J. Comput. Chem. 2008, 29, 601−611] was assessed by calculating densities, heats of vaporization, and bulk moduli of pure hydrocarbons and the mixtures of these hydrocarbons, i.... read less NOT USED (high confidence) S. Hartmann et al., “Experimental and computational studies on the role of surface functional groups in the mechanical behavior of interfaces between single-walled carbon nanotubes and metals,” Journal of Materials Science. 2016. link Times cited: 8 NOT USED (high confidence) Y. Zhang, Q. Pei, J.-W. Jiang, N. Wei, and Y.-W. Zhang, “Thermal conductivities of single- and multi-layer phosphorene: a molecular dynamics study.,” Nanoscale. 2016. link Times cited: 136 Abstract: As a new two-dimensional (2D) material, phosphorene has draw… read moreAbstract: As a new two-dimensional (2D) material, phosphorene has drawn growing attention owing to its novel electronic properties, such as layer-dependent direct bandgaps and high carrier mobility. Herein we investigate the in-plane and cross-plane thermal conductivities of single- and multi-layer phosphorene, focusing on geometrical (sample size, orientation and layer number) and strain (compression and tension) effects. A strong anisotropy is found in the in-plane thermal conductivity with its value along the zigzag direction being much higher than that along the armchair direction. Interestingly, the in-plane thermal conductivity of multi-layer phosphorene is insensitive to the layer number, which is in strong contrast to that of graphene where the interlayer interactions strongly influence the thermal transport. Surprisingly, tensile strain leads to an anomalous increase in the in-plane thermal conductivity of phosphorene, in particular in the armchair direction. Both the in-plane and cross-plane thermal conductivities can be modulated by external strain; however, the strain modulation along the cross-plane direction is more effective and thus more tunable than that along the in-plane direction. Our findings here are of great importance for the thermal management in phosphorene-based nanoelectronic devices and for thermoelectric applications of phosphorene. read less NOT USED (high confidence) S. Bhoi, T. Banerjee, and K. Mohanty, “Insights on the combustion and pyrolysis behavior of three different ranks of coals using reactive molecular dynamics simulation,” RSC Advances. 2016. link Times cited: 39 Abstract: The process of combustion and pyrolysis of coal can be consi… read moreAbstract: The process of combustion and pyrolysis of coal can be considered to be convoluted where numerous intermediates are expected to form during the course of the reaction. In this work, we have investigated the reactive products using the ReaxFF force field for three different ranked (low to high) coals, namely lignite, bituminous, and anthracite. It was observed that during the pyrolysis and combustion processes, the gases CO and CO2 were predominant. The formation rate of CO and CO2 was found to be higher for lignite coal which agreed with the experimental trend reported in the literature. In a similar manner, the fraction of CO and CO2 was found to be higher in the pyrolysis process. Further, a large number of principal intermediates such as methane, ethane and ethylene are also generated for low to high ranking (lignite, bituminous, and anthracite) coal. The pyrolysis and combustion processes were affected by temperature (2000–4000 K) with respect to the formation of various intermediates (methane, ethane and ethylene). They were found to be high throughout irrespective of the rank of coal. A higher temperature (2000–4000 K) was adopted in the reactive molecular dynamics (MD) simulation so as to visualize the chemical reactions within a computationally affordable time. read less NOT USED (high confidence) A. I. Khan, I. Navid, M. Noshin, H. Uddin, F. F. Hossain, and S. Subrina, “Equilibrium Molecular Dynamics (MD) Simulation Study of Thermal Conductivity of Graphene Nanoribbon: A Comparative Study on MD Potentials,” Electronics. 2015. link Times cited: 66 Abstract: The thermal conductivity of graphene nanoribbons (GNRs) has … read moreAbstract: The thermal conductivity of graphene nanoribbons (GNRs) has been investigated using equilibrium molecular dynamics (EMD) simulation based on Green-Kubo (GK) method to compare two interatomic potentials namely optimized Tersoff and 2nd generation Reactive Empirical Bond Order (REBO). Our comparative study includes the estimation of thermal conductivity as a function of temperature, length and width of GNR for both the potentials. The thermal conductivity of graphene nanoribbon decreases with the increase of temperature. Quantum correction has been introduced for thermal conductivity as a function of temperature to include quantum effect below Debye temperature. Our results show that for temperatures up to Debye temperature, thermal conductivity increases, attains its peak and then falls off monotonically. Thermal conductivity is found to decrease with the increasing length for optimized Tersoff potential. However, thermal conductivity has been reported to increase with length using 2nd generation REBO potential for the GNRs of same size. Thermal conductivity, for the specified range of width, demonstrates an increasing trend with the increase of width for both the concerned potentials. In comparison with 2nd generation REBO potential, optimized Tersoff potential demonstrates a better modeling of thermal conductivity as well as provides a more appropriate description of phonon thermal transport in graphene nanoribbon. Such comparative study would provide a good insight for the optimization of the thermal conductivity of graphene nanoribbons under diverse conditions. read less NOT USED (high confidence) T. Han, Y. Luo, and C. Wang, “Effects of SI, N and B Doping on the Mechanical Properties of Graphene Sheets,” Acta Mechanica Solida Sinica. 2015. link Times cited: 15 NOT USED (high confidence) M. Moradi and J. A. Mohandesi, “Mechanical behavior of carbon nanotube and graphene junction as a building block for 3D carbon nanostructures,” AIP Advances. 2015. link Times cited: 15 Abstract: The incorporation of defects in junction area of 1D and 2D c… read moreAbstract: The incorporation of defects in junction area of 1D and 2D carbon nanostructures has a major impact on properties of their 3D structures. In the present study, molecular dynamics simulation is utilized to examine the mechanical behavior of graphene sheet (GS) in carbon nanotube (CNT)-GS junctions. The tensile load was applied along the GS in connection with CNTs of different chiralities. The adaptive intermolecular reactive empirical bond order potential was chosen to model C-C interactions. It provided a reliable model for CNT, GS and their junctions. The results revealed that the connection of CNT to the GS with a hole could improve the mechanical properties of defective GS, which appeared to be independent of CNT type. It was found that the high strength C-C bonds postpone the crack propagation and motivates new crack nucleation. When a hole or CNT placed on the GS, it caused stress concentration, exactly along a line on its side. The lower mechanical properties were consequently associated with crack ... read less NOT USED (high confidence) J. Wang, A. Zhang, and Y.-gui Tang, “Tunable thermal conductivity in carbon allotrope sheets: Role of acetylenic linkages,” Journal of Applied Physics. 2015. link Times cited: 13 Abstract: The versatility of carbon in forming the hybridization state… read moreAbstract: The versatility of carbon in forming the hybridization states allows one to design more carbon allotropes with various fascinating properties by replacing some aromatic bonds with acetylenic linkages. We investigate thermal conductivities of carbon allotrope sheets with different configurations by nonequilibrium molecular dynamic simulations. It is found that the acetylenic linkages not only considerably reduce thermal conductivity but also can effectively tune thermal conductivity through the various bonding methods. We suggest that the structure of stripes of benzene rings transversely bonded with the acetylenic linkages can potentially be one of high thermoelectric materials. We find that the reason for the manipulation of thermal conductivity by the acetylenic linkage can be attributed to the strong localizations of phonon modes that result in the reduced phonon group velocity and the shortened lifetime of phonons. It is also observed that thermal conductivity of graphyne sheet shows a power-law diver... read less NOT USED (high confidence) M. M. Zaeri and S. Ziaei-Rad, “Elastic behavior of carbon nanocoils: A molecular dynamics study,” AIP Advances. 2015. link Times cited: 16 Abstract: Elastic behavior of carbon nanocoils is investigated through… read moreAbstract: Elastic behavior of carbon nanocoils is investigated through molecular dynamics simulations. In particular, spring constants of various nanocoils are derived. To do so, first a geometric model is prepared with the aid of finite element mesh generator. Then applying AIREBO potential, the model is simulated under tensile loading. Using the obtained deformation data, the spring constant is calculated. In order to study the effect of structural parameters, change of elastic properties with helix diameter as well as tube diameter is examined. The results are compared to those obtained via other methods reported in literature. read less NOT USED (high confidence) Y. Sakane, K. Mouri, and K. Shintani, “Morphology of a columnar stack of coronene molecules encapsulated in a single-walled carbon nanotube,” AIP Advances. 2015. link Times cited: 8 Abstract: The morphology of stacked coronene molecules encapsulated in… read moreAbstract: The morphology of stacked coronene molecules encapsulated in a single-walled carbon nanotube (SWCNT) is investigated using atomistic simulation. First, the minimum energy configuration of coronene molecules in a SWCNT is sought by means of conjugate gradient (CG) minimization. Secondly, encapsulation of coronene molecules into a SWCNT existing in a coronene atmosphere is simulated by means of molecular dynamics (MD). In both of the simulations, the diameter of the SWCNT ranges from 1.35 to 1.69 nm, and the final configurations of coronene molecules within a SWCNT are examined. In a thin SWCNT, coronene molecules tilt against the radial direction of the SWCNT and slide relative to each other, whereas in a thick SWCNT, they do not tilt but rotate relative to each other. In a SWCNT of the intermediate diameter, they tilt, slide, and rotate. For the SWCNT diameter less than or equal to 1.52 nm, the mean tilt angle of the stacked coronene molecules almost linearly decreases with increasing the diameter, whereas for the diameter above 1.52 nm, it is approximately 0∘. To check the validity of the results, the MD simulations are performed changing the density of the coronene atmosphere and the length of the SWCNT; the results prove to be valid. Finally, the effects of temperature on the mean tilt angle and mean intermolecular distance of stacked coronene molecules are examined by a rather simplified simulation, which shows that both of them increase with increasing temperature. read less NOT USED (high confidence) A. Gamboa, B. Farbos, P. Aurel, G. Vignoles, and J.-M. Leyssale, “Mechanism of strength reduction along the graphenization pathway,” Science Advances. 2015. link Times cited: 16 Abstract: Stable single-bond cracks retard failure in low-temperature … read moreAbstract: Stable single-bond cracks retard failure in low-temperature polycrystalline graphenes with respect to heat-treated samples. Even though polycrystalline graphene has shown a surprisingly high tensile strength, the influence of inherent grain boundaries on such property remains unclear. We study the fracture properties of a series of polycrystalline graphene models of increasing thermodynamic stability, as obtained from a long molecular dynamics simulation at an elevated temperature. All of the models show the typical and well-documented brittle fracture behavior of polycrystalline graphene; however, a clear decrease in all fracture properties is observed with increasing annealing time. The remarkably high fracture properties obtained for the most disordered (less annealed) structures arise from the formation of many nonpropagating prefracture cracks, significantly retarding failure. The stability of these reversible cracks is due to the nonlocal character of load transfer after a bond rupture in very disordered systems. It results in an insufficient strain level on neighboring bonds to promote fracture propagation. Although polycrystallinity seems to be an unavoidable feature of chemically synthesized graphenes, these results suggest that targeting highly disordered states might be a convenient way to obtain improved mechanical properties. read less NOT USED (high confidence) L. Cui, Y. Feng, and X. Zhang, “Dependence of Thermal Conductivity of Carbon Nanopeapods on Filling Ratios of Fullerene Molecules.,” The journal of physical chemistry. A. 2015. link Times cited: 18 Abstract: Focusing on carbon nanopeapods (CNPs), i.e., carbon nanotube… read moreAbstract: Focusing on carbon nanopeapods (CNPs), i.e., carbon nanotubes (CNTs) filled with fullerene C60 molecules, the thermal conductivity and its dependence on the filling ratio of C60 molecules have been investigated by equilibrium molecular dynamics simulations. It turns out that the CNP thermal conductivity increases first, reaches its maximum value at filling ratio of 50%, and then decreases with increasing filling ratio. The heat transfer mechanisms were analyzed by the motion of C60 molecules, the mass transfer contribution, the phonon vibrational density of states, and the relative contributions of tube and C60 molecules to the total heat flux. The mass transfer in CNPs is mainly attributed to the rotational and translational motion of C60 molecules in tubes. As the filling ratio is larger than 50%, the axially translational motion of C60 molecules gets more and more restricted with increasing filling ratio. For either the mass transfer contribution to heat transfer or the phonon coupling between the tube wall and C60, the peaking behavior occurs at a filling ratio of 50%, which confirms the corresponding maximum thermal conductivity of CNP. With the filling ratio increasing, the dominating contribution to heat transfer changes from tube-wall atoms to fullerene atoms. Their relative contributions almost keep stable when the filling ratio is larger than 50% until it reaches 100%, where the contribution from fullerene atoms suddenly drops because of strong confinement of translational motion of C60 molecules. This work may offer valuable routes for probing heat transport in CNT hybrid structures, and possible device applications. read less NOT USED (high confidence) D. Marshall and H. Sadeghpour, “Simulating the Formation of Carbon-rich Molecules on an idealised Graphitic Surface,” arXiv: Earth and Planetary Astrophysics. 2015. link Times cited: 3 Abstract: There is accumulating evidence for the presence of complex m… read moreAbstract: There is accumulating evidence for the presence of complex molecules, including carbon-bearing and organic molecules, in the interstellar medium. Much of this evidence comes to us from studies of chemical composition, photo- and mass-spectroscopy in cometary, meteoritic and asteroid samples, indicating a need to better understand the surface chemistry of astrophysical objects. There is also considerable interest in the origins of life-forming and life-sustaining molecules on Earth. Here, we perform reactive molecular dynamics simulations to probe the formation of carbon-rich molecules and clusters on carbonaceous surfaces resembling dust grains and meteoroids. Our results show that large chains form on graphitic surfaces at low temperatures (100K - 500K) and smaller fullerene-like molecules form at higher temperatures (2000K - 3000K). The formation is faster on the surface than in the gas at low temperatures but slower at high temperatures as surface interactions prevent small clusters from coagulation. We find that for efficient formation of molecular complexity, mobility about the surface is important and helps to build larger carbon chains on the surface than in the gas phase at low temperatures. Finally, we show that the temperature of the surface strongly determines what kind of structures forms and that low turbulent environments are needed for efficient formation. read less NOT USED (high confidence) A. Galashev and V. Polukhin, “Removal of a lead film from graphene by xenon-beam bombardment: Computer experiment,” Journal of Surface Investigation. X-ray, Synchrotron and Neutron Techniques. 2015. link Times cited: 1 NOT USED (high confidence) X. Song, J. Liu, H. Li, and L. Zhao, “Atomistic simulation of electrical enhanced nanowelding of carbon nanotube to metal,” Microsystem Technologies. 2015. link Times cited: 5 NOT USED (high confidence) A. Galashev and Y. Zaikov, “Molecular dynamics study of Li+ migration through graphene membranes,” Russian Journal of Electrochemistry. 2015. link Times cited: 13 NOT USED (high confidence) A. Montazeri, S. Ebrahimi, and H. Rafii-Tabar, “A molecular dynamics investigation of buckling behaviour of hydrogenated graphene,” Molecular Simulation. 2015. link Times cited: 13 Abstract: Molecular dynamics simulations have been performed to charac… read moreAbstract: Molecular dynamics simulations have been performed to characterise the stability behaviour of graphene nanoribbons having different hydrogen coverage, subject to a uniaxial compressive load. The temperature is set at a very low value to circumvent the contribution of thermal agitations. The results show that hydrogen coverage promotes to a rapid drop in the strain of buckling onset due to the effects of easy rotation of newly unsupported sp3 bonds. Furthermore, we have also found a critical value of the hydrogen adsorption above which the declining trend in the stability behaviour of hydrogenated graphene nanoribbons is reversed. read less NOT USED (high confidence) J. Harrison, M. Fallet, K. E. Ryan, B. L. Mooney, M. T. Knippenberg, and J. Schall, “Recent developments and simulations utilizing bond-order potentials,” Modelling and Simulation in Materials Science and Engineering. 2015. link Times cited: 12 Abstract: Bond-order potentials (BOPs) have been used successfully in … read moreAbstract: Bond-order potentials (BOPs) have been used successfully in simulations of a wide range of processes. A brief overview of bond-order potentials is provided which focuses on the reactive empirical bond-order (REBO) potential for hydrocarbons (Brenner et al 2002 J. Phys.: Condens. Matter 14 783) and the large number of useful potentials it has spawned. Two specific extensions of the REBO potential that make use of its formalism are discussed. First, the 2B-SiCH potential (Schall and Harrison 2013 J. Phys. Chem. C 117 1323) makes the appropriate changes to the hydrocarbon REBO potential so that three atom types, Si, C, and H, can be modeled. Second, we recently added the electronegative element O, along with the associated charge terms, to the adaptive intermolecular REBO (AIREBO) potential (Stuart et al 2000 J. Chem. Phys. 112 6472). The resulting qAIREBO potential (Knippenberg et al 2012 J. Chem. Phys. 136 164701) makes use of the bond-order potential/split-charge (BOP/SQE) equilibration method (Mikulski et al 2009 J. Chem. Phys. 131 241105) and the Lagrangian approach to charge dynamics (Rick et al 1994 J. Chem. Phys. 101 6141). The integration of these two techniques allows for atomic charges to evolve with time during MD simulations: as a result, chemical reactions can be modeled in C-, O-, and H-containing systems. The usefulness of the 2B-SiCH potential for tribological investigations is demonstrated in molecular dynamics (MD) simulations of axisymmetric tips composed of Si and SiC placed in sliding contact with diamond(1 1 1) surfaces with varying amounts of hydrogen termination. The qAIREBO potential is used to investigate confinement of sub-monolayer coverages of water between nanostructured surfaces. read less NOT USED (high confidence) C. Wang, H. Yang, H. Fan, X.-gang Yu, and P. Yang, “Heat transfer regulation of hole defect graphene by nitrogen doping,” Applied Physics A. 2015. link Times cited: 5 NOT USED (high confidence) I. Tejada, L. Brochard, T. Lelièvre, G. Stoltz, F. Legoll, and É. Cancès, “Coupling a reactive potential with a harmonic approximation for atomistic simulations of material failure,” Computer Methods in Applied Mechanics and Engineering. 2015. link Times cited: 1 NOT USED (high confidence) S. Ekesan and J. Herzfeld, “Pointillist rendering of electron charge and spin density suffices to replicate trends in atomic properties,” Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences. 2015. link Times cited: 7 Abstract: The monotonic and non-monotonic variations of atomic propert… read moreAbstract: The monotonic and non-monotonic variations of atomic properties within and between the rows of the periodic table underlie our understanding of chemistry and accounting for these variations has been a signature strength of quantum mechanics (QM). However, the computational burden of QM motivates the development of more efficient means of describing electrons and reactivity. The recently developed LEWIS• model incorporates lessons learnt from QM into a force field that includes electrons as explicit pseudo-classical particles. Here, we extend LEWIS• across the 2p and 3p elements, and show that it is capable of reproducing both monotonic and non-monotonic variations of chemically important atomic properties in a cost-effective manner. An indicator of the strength of the construct is the ability of pairwise potentials trained on ionization energies and the order of spin configurations to predict atomic polarizabilities. In this manner, some insights of QM are uncoupled from its onerous computational burden. read less NOT USED (high confidence) A. Sadeghirad, N. Su, and F. Liu, “Mechanical modeling of graphene using the three-layer-mesh bridging domain method,” Computer Methods in Applied Mechanics and Engineering. 2015. link Times cited: 12 NOT USED (high confidence) U. Monteverde et al., “Under pressure: control of strain, phonons and bandgap opening in rippled graphene,” Carbon. 2015. link Times cited: 59 NOT USED (high confidence) C. Daniels et al., “Elastic, plastic, and fracture mechanisms in graphene materials,” Journal of Physics: Condensed Matter. 2015. link Times cited: 24 Abstract: In both research and industry, materials will be exposed to … read moreAbstract: In both research and industry, materials will be exposed to stresses, be it during fabrication, normal use, or mechanical failure. The response to external stress will have an important impact on properties, especially when atomic details govern the functionalities of the materials. This review aims at summarizing current research involving the responses of graphene and graphene materials to applied stress at the nanoscale, and to categorize them by stress–strain behavior. In particular, we consider the reversible functionalization of graphene and graphene materials by way of elastic deformation and strain engineering, the plastic deformation of graphene oxide and the emergence of such in normally brittle graphene, the formation of defects as a response to stress under high temperature annealing or irradiation conditions, and the properties that affect how, and mechanisms by which, pristine, defective, and polycrystalline graphene fail catastrophically during fracture. Overall we find that there is significant potential for the use of existing knowledge, especially that of strain engineering, as well as potential for additional research into the fracture mechanics of polycrystalline graphene and device functionalization by way of controllable plastic deformation of graphene. read less NOT USED (high confidence) M. P. Ariza and J. P. Mendez, “Stability of discrete topological defects in graphene,” Journal of Mechanics of Materials and Structures. 2015. link Times cited: 3 NOT USED (high confidence) J. Song, S. Lee, J. Lee, and C.-D. Yeo, “Atomic Degradation and Wear of Thin Carbon Films Under High-Speed Sliding Contact Using Molecular Dynamics Simulation,” Tribology Letters. 2015. link Times cited: 63 NOT USED (high confidence) T. Zhang, X. Li, and H. Gao, “Fracture of graphene: a review,” International Journal of Fracture. 2015. link Times cited: 141 NOT USED (high confidence) A. Sellerio, A. Taloni, and S. Zapperi, “Fracture size effects in nanoscale materials: the case of graphene,” arXiv: Mesoscale and Nanoscale Physics. 2015. link Times cited: 11 Abstract: Nanoscale materials display enhanced strength and toughness … read moreAbstract: Nanoscale materials display enhanced strength and toughness but also larger fluctuations and more pronounced size effects with respect to their macroscopic counterparts. Here we study the system size-dependence of the failure strength distribution of a monolayer graphene sheet with a small concentration of vacancies by molecular dynamics simulations. We simulate sheets of varying size encompassing more than three decades and systematically study their deformation as a function of disorder, temperature and loading rate. We generalize the weakest-link theory of fracture size effects to rate and temperature dependent failure and find quantitative agreement with the simulations. Our numerical and theoretical results explain the crossover of the fracture strength distribution between a thermal and rate-dependent regime and a disorder-dominated regime described by extreme value theory. read less NOT USED (high confidence) Y. D. Fomin, V. Ryzhov, and E. N. Tsiok, “The behavior of cyclohexane confined in slit carbon nanopore.,” The Journal of chemical physics. 2015. link Times cited: 14 Abstract: It is well known that confining a liquid into a pore strongl… read moreAbstract: It is well known that confining a liquid into a pore strongly alters the liquid behavior. Investigations of the effect of confinement are of great importance for many scientific and technological applications. Here we present a molecular dynamics study of the behavior of cyclohexane confined in carbon slit pores. The local structure and orientational ordering of cyclohexane molecules are investigated. It is shown that the system freezes with decreasing the pore width, and the freezing temperature of nanoconfined cyclohexane is higher than the bulk one. read less NOT USED (high confidence) B. D. Jensen, K. Wise, and G. Odegard, “The effect of time step, thermostat, and strain rate on ReaxFF simulations of mechanical failure in diamond, graphene, and carbon nanotube,” Journal of Computational Chemistry. 2015. link Times cited: 83 Abstract: As the sophistication of reactive force fields for molecular… read moreAbstract: As the sophistication of reactive force fields for molecular modeling continues to increase, their use and applicability has also expanded, sometimes beyond the scope of their original development. Reax Force Field (ReaxFF), for example, was originally developed to model chemical reactions, but is a promising candidate for modeling fracture because of its ability to treat covalent bond cleavage. Performing reliable simulations of a complex process like fracture, however, requires an understanding of the effects that various modeling parameters have on the behavior of the system. This work assesses the effects of time step size, thermostat algorithm and coupling coefficient, and strain rate on the fracture behavior of three carbon‐based materials: graphene, diamond, and a carbon nanotube. It is determined that the simulated stress‐strain behavior is relatively independent of the thermostat algorithm, so long as coupling coefficients are kept above a certain threshold. Likewise, the stress‐strain response of the materials was also independent of the strain rate, if it is kept below a maximum strain rate. Finally, the mechanical properties of the materials predicted by the Chenoweth C/H/O parameterization for ReaxFF are compared with literature values. Some deficiencies in the Chenoweth C/H/O parameterization for predicting mechanical properties of carbon materials are observed. © 2015 Wiley Periodicals, Inc. read less NOT USED (high confidence) A. Favata, A. Micheletti, S. Ryu, and N. Pugno, “An analytical benchmark and a Mathematica program for MD codes: Testing LAMMPS on the 2nd generation Brenner potential,” Comput. Phys. Commun. 2015. link Times cited: 13 NOT USED (high confidence) M. Migliorato et al., “Beyond ZnO nanowires for piezotronics and nanogenerators,” 2015 IEEE 15th International Conference on Nanotechnology (IEEE-NANO). 2015. link Times cited: 0 Abstract: In the past decade ZnO nanowires have been the key enabling … read moreAbstract: In the past decade ZnO nanowires have been the key enabling material for demonstrating novel electronics components in the field of piezotronics and in the first realization of a nanogenerator. What are the materials that will be crucial in demonstrating even more novel devices in future years? We propose the use of both core shell nanowires and graphene as key enablers of new functionalities. read less NOT USED (high confidence) A. Fraile, E. Koukaras, K. Papagelis, N. Lazarides, and G. P. Tsironis, “Long-lived discrete breathers in free-standing graphene,” Chaos Solitons & Fractals. 2015. link Times cited: 20 NOT USED (high confidence) T. Guo et al., “Tuning the thermal conductivity of multi-layer graphene with interlayer bonding and tensile strain,” Applied Physics A. 2015. link Times cited: 28 NOT USED (high confidence) C. D. Latham, A. J. McKenna, T. Trevethan, M. Heggie, M. Rayson, and P. Briddon, “On the validity of empirical potentials for simulating radiation damage in graphite: a benchmark,” Journal of Physics: Condensed Matter. 2015. link Times cited: 23 Abstract: In this work, the ability of methods based on empirical pote… read moreAbstract: In this work, the ability of methods based on empirical potentials to simulate the effects of radiation damage in graphite is examined by comparing results for point defects, found using ab initio calculations based on density functional theory (DFT), with those given by two state of the art potentials: the Environment-Dependent Interatomic Potential (EDIP) and the Adaptive Intermolecular Reactive Empirical Bond Order potential (AIREBO). Formation energies for the interstitial, the vacancy and the Stone–Wales (5775) defect are all reasonably close to DFT values. Both EDIP and AIREBO can thus be suitable for the prompt defects in a cascade, for example. Both potentials suffer from arefacts. One is the pinch defect, where two α-atoms adopt a fourfold-coordinated sp3 configuration, that forms a cross-link between neighbouring graphene sheets. Another, for AIREBO only, is that its ground state vacancy structure is close to the transition state found by DFT for migration. The EDIP fails to reproduce the ground state self-interstitial structure given by DFT, but has nearly the same formation energy. Also, for both potentials, the energy barriers that control diffusion and the evolution of a damage cascade, are not well reproduced. In particular the EDIP gives a barrier to removal of the Stone–Wales defect as 0.9 eV against DFT's 4.5 eV. The suite of defect structures used is provided as supplementary information as a benchmark set for future potentials. read less NOT USED (high confidence) T. Wejrzanowski, M. Grybczuk, M. Wasiluk, and K. Kurzydłowski, “Heat transfer through metal-graphene interfaces,” AIP Advances. 2015. link Times cited: 19 Abstract: The paper presents the results of Molecular Dynamics (MD) st… read moreAbstract: The paper presents the results of Molecular Dynamics (MD) studies of the thermal properties of Cu and Ag composites with single- (SLG) and multi-layered (MLG) graphene. We show that the thermal boundary conductance (TBC) of the metal-graphene interface drops significantly for the systems containing more than one layer of graphene. It is also concluded that the TBC for a single graphene layer is significantly higher for silver than for copper. For both systems, however, we found that the interface is a barrier for heat transfer with the thermal conductance being at least two orders of magnitude lower than for metal. Moreover, we found that the TBC decreases with an increase in the number of graphene layers. The interfacial effect becomes negligible for a thickness bigger than two graphene layers. Above this thickness the thermal conductivity of the region of multilayered graphene is not influenced by the interface and becomes similar to that of graphite. The results are compared with available experimental... read less NOT USED (high confidence) A. Muniz and A. F. Fonseca, “Carbon-Based Nanostructures Derived from Bilayer Graphene with Zero Thermal Expansion Behavior,” Journal of Physical Chemistry C. 2015. link Times cited: 16 Abstract: Low or zero thermal expansion (ZTE) materials are suitable f… read moreAbstract: Low or zero thermal expansion (ZTE) materials are suitable for applications requiring low dimensional changes under large temperature variations. Using density functional theory calculations and classical molecular dynamics simulations, we demonstrate that tailoring the density of covalent carbon–carbon interlayer bonds in bilayer graphene tunes its thermal expansion coefficient from negative to positive values at room temperature and, most exciting, causes it to exhibit ZTE behavior in a wide range of temperatures. read less NOT USED (high confidence) J. Baimova, L. Rysaeva, B. Liu, S. Dmitriev, and K. Zhou, “From flat graphene to bulk carbon nanostructures,” physica status solidi (b). 2015. link Times cited: 31 Abstract: Studies on thin sheets and related materials are of high imp… read moreAbstract: Studies on thin sheets and related materials are of high importance nowadays because of their great potential in various applications. The latest success in the production of graphene opens many new opportunities for the construction of novel three‐dimensional carbon nanostructures that exhibit good mechanical and electronic properties together with high specific surface area. Such novel nanostructures based on graphene sheets are very promising for energy storage devices, supercapacitors and stretchable electronics, to name a few. In this work, the mechanical responses of new bulk carbon nanostructures under hydrostatic pressure or shear strain are investigated, respectively, via molecular dynamics simulations. The size effect of the structural units on the strength of crumpled graphene is analyzed. The studied bulk carbon nanostructures are found to be extremely stable against diamondization. It is shown that the structures and mechanical properties of bulk carbon nanomaterials can be altered by severe plastic shear deformation. Shear strain leads to the formation of stable structures, even at relatively small strain. read less NOT USED (high confidence) X. Wu, H. Zhao, D. Yan, and J. Pei, “Investigation on gallium ions impacting monolayer graphene,” AIP Advances. 2015. link Times cited: 13 Abstract: In this paper, the physical phenomena of gallium (Ga+) ion i… read moreAbstract: In this paper, the physical phenomena of gallium (Ga+) ion impacting monolayer graphene in the nanosculpting process are investigated experimentally, and the mechanisms are explained by using Monte Carlo (MC) and molecular dynamics (MD) simulations. Firstly, the MC method is employed to clarify the phenomena happened to the monolayer graphene target under Ga+ ion irradiation. It is found that substrate has strong influence on the damage mode of graphene. The mean sputtering yield of graphene under 30 keV Ga+ ion irradiation is 1.77 and the least ion dose to completely remove carbon atoms in graphene is 21.6 ion/nm2. Afterwards, the focused ion beam over 21.6 ion/nm2 is used for the irradiation on a monolayer graphene supported by SiO2 experimentally, resulting in the nanostructures, i.e., nanodot and nanowire array on the graphene. The performances of the nanostructures are characterized by atomic force microscopy and Raman spectrum. A plasma plume shielding model is put forward to explain the nanosculpting results of graphene under different irradiation parameters. In addition, two damage mechanisms are found existing in the fabrication process of the nanostructures by using empirical MD simulations. The results can help us open the possibilities for better control of nanocarbon devices. read less NOT USED (high confidence) H. W. Kim et al., “Nanoscale control of phonon excitations in graphene,” Nature Communications. 2015. link Times cited: 48 NOT USED (high confidence) J. Kroes, F. Pietrucci, A. V. van Duin, and W. Andreoni, “Atom Vacancies on a Carbon Nanotube: To What Extent Can We Simulate their Effects?,” Journal of chemical theory and computation. 2015. link Times cited: 7 Abstract: Atom vacancies are intrinsic defects of carbon nanotubes. Us… read moreAbstract: Atom vacancies are intrinsic defects of carbon nanotubes. Using a zigzag nanotube as reference, this paper focuses on the comparison of calculations performed within density functional theory and a number of classical force fields widely used for carbon systems. The results refer to single and double vacancies and, in particular, to the induced structural changes, the formation energies, and the energy barriers relative to elementary processes such as reconstruction, migration, and coalescence. Characterization of these processes is remarkably different in the different approaches. These findings are meant to contribute to the construction of DFT-based classical schemes for carbon nanostructures. read less NOT USED (high confidence) O. Glukhova, A. Kolesnikova, M. Slepchenkov, and D. S. Shmygin, “Atomic structure of energetically stable carbon nanotubes/graphene composites,” Physics of the Solid State. 2015. link Times cited: 11 NOT USED (high confidence) J. Chen, W. Qi, M. Zhang, and H. Zhao, “Kinetic behavior of subsonic solitary wave in graphene nanoribbon,” Journal of Statistical Mechanics: Theory and Experiment. 2015. link Times cited: 3 Abstract: In this paper we investigate the kinetic behavior of subsoni… read moreAbstract: In this paper we investigate the kinetic behavior of subsonic solitary waves in graphene nanoribbons by means of molecular dynamics simulations. Unlike generating the supersonic solitary waves by a strong excitation, we generate three types of subsonic solitary waves by absorbing the thermal fluctuations in the armchair and zigzag graphene nanoribbons. They are localized in longitudinal, transverse, or coupled in both velocity directions with propagation speeds lower than the sound speeds. Their typical width is about 20–80 nm, which is much longer than the width of the supersonic solitary wave. More interestingly, they correspond to energy cavities rather than energy summits in the energy distribution due to the deformation in the density distribution. The observation of subsonic solitary waves with energy cavities implies the numerical evidence of dark solitary waves in graphene. Furthermore, the collisions between two solitary waves are investigated. The nonlinear phase shift only occurs during the collision of two solitary waves localized in the same velocity direction. We hope our results shed light on understanding the particular nonlinear properties of graphene. read less NOT USED (high confidence) N. Orekhov and V. Stegailov, “Graphite melting: Atomistic kinetics bridges theory and experiment,” Carbon. 2015. link Times cited: 38 NOT USED (high confidence) T. Jacobs, J. A. Lefever, and R. Carpick, “Measurement of the Length and Strength of Adhesive Interactions in a Nanoscale Silicon–Diamond Interface,” Advanced Materials Interfaces. 2015. link Times cited: 20 Abstract: The adhesive interactions between nanoscale silicon atomic f… read moreAbstract: The adhesive interactions between nanoscale silicon atomic force microscope (AFM) probes and a diamond substrate are characterized using in situ adhesion tests inside of a transmission electron microscope (TEM). In particular, measurements are presented both for the strength of the adhesion acting between the two materials (characterized by the intrinsic work of adhesion Wadh,int) and for the length scale of the interaction (described by the range of adhesion z0). These values are calculated using a novel analysis technique that requires measurement of the AFM probe geometry, the adhesive force, and the position where the snap‐in instability occurs. Values of Wadh = 0.66 J m−2 and z0 = 0.25 nm are extracted using this technique. This value of work of adhesion is 70% higher than the work of adhesion calculated if one uses a conventional paraboloidal asperity model. Comparing to literature, the work of adhesion obtained using the new method is significantly higher than most experimental and simulation values for similar material pairs. The discrepancy is attributed to nanoscale roughness, which was not accounted for previously. Furthermore, the value of the range of adhesion is comparable to previously reported values, but is significantly larger than the commonly assumed value of the interatomic spacing. read less NOT USED (high confidence) G. Palka, M. Kański, D. Maciążek, B. Garrison, and Z. Postawa, “Computer simulations of material ejection during C60 and Arm bombardment of octane and β-carotene,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2015. link Times cited: 4 NOT USED (high confidence) S. Skowron, I. Lebedeva, A. Popov, and E. Bichoutskaia, “Energetics of atomic scale structure changes in graphene.,” Chemical Society reviews. 2015. link Times cited: 107 Abstract: The presence of defects in graphene has an essential influen… read moreAbstract: The presence of defects in graphene has an essential influence on its physical and chemical properties. The formation, behaviour and healing of defects are determined by energetic characteristics of atomic scale structure changes. In this article, we review recent studies devoted to atomic scale reactions during thermally activated and irradiation-induced processes in graphene. The formation energies of vacancies, adatoms and topological defects are discussed. Defect formation, healing and migration are quantified in terms of activation energies (barriers) for thermally activated processes and by threshold energies for processes occurring under electron irradiation. The energetics of defects in the graphene interior and at the edge is analysed. The effects of applied strain and a close proximity of the edge on the energetics of atomic scale reactions are overviewed. Particular attention is given to problems where further studies are required. read less NOT USED (high confidence) X. Qiu, D. Xu, T. Lin, X. Yang, Y. Liu, and P. He, “Molecular dynamics simulation of the effect of carbon nanotube chirality on nano-joining with gold particle,” Materials Transactions. 2015. link Times cited: 0 Abstract: The behavior of gold atoms depending on the CNT chirality in… read moreAbstract: The behavior of gold atoms depending on the CNT chirality in a nanojoining process is studied by molecular dynamics simulation. The deformation regularity and the diffusing characteristic of the gold particle during the joining process, as well as the C-Au bonds distribution in the final joint are studied. Our results show that when joining with higher spirality CNT, gold particle tends to deform more. With the CNT more similar to armchair type, the gold particle as a whole displaces more. In the final joint, the total bonds number decreases from typical armchair CNT to typical zig-zag CNT. However, the bonds distribution in detail is irregular from joint to joint, which is the consequence of lattice structure of both materials. [doi:10.2320/matertrans.MI201403] read less NOT USED (high confidence) N. Onofrio and A. Strachan, “Voltage equilibration for reactive atomistic simulations of electrochemical processes.,” The Journal of chemical physics. 2015. link Times cited: 37 Abstract: We introduce electrochemical dynamics with implicit degrees … read moreAbstract: We introduce electrochemical dynamics with implicit degrees of freedom (EChemDID), a model to describe electrochemical driving force in reactive molecular dynamics simulations. The method describes the equilibration of external electrochemical potentials (voltage) within metallic structures and their effect on the self-consistent partial atomic charges used in reactive molecular dynamics. An additional variable assigned to each atom denotes the local potential in its vicinity and we use fictitious, but computationally convenient, dynamics to describe its equilibration within connected metallic structures on-the-fly during the molecular dynamics simulation. This local electrostatic potential is used to dynamically modify the atomic electronegativities used to compute partial atomic changes via charge equilibration. Validation tests show that the method provides an accurate description of the electric fields generated by the applied voltage and the driving force for electrochemical reactions. We demonstrate EChemDID via simulations of the operation of electrochemical metallization cells. The simulations predict the switching of the device between a high-resistance to a low-resistance state as a conductive metallic bridge is formed and resistive currents that can be compared with experimental measurements. In addition to applications in nanoelectronics, EChemDID could be useful to model electrochemical energy conversion devices. read less NOT USED (high confidence) T. Panczyk, P. Wolski, L. Konczak, and J. Narkiewicz-Michałek, “Sidewall Functionalization of Carbon Nanotubes as a Method of Controlling Structural Transformations of the Magnetically Triggered Nanocontainer: A Molecular Dynamics Study,” Journal of Physical Chemistry C. 2015. link Times cited: 6 Abstract: The magnetically triggered nanocontainer, that is, magnetic … read moreAbstract: The magnetically triggered nanocontainer, that is, magnetic nanoparticles covalently linked to carbon nanotube tips, is able to make reversible cycles of capping and uncapping of the nanotube inner cavity. The capped form is when the magnetic nanoparticles adhere to the nanotube tips, whereas the uncapped configuration forms when the magnetic nanoparticle shifts to the nanotube sidewall. The feasibility and likelihood of these two structural forms of the nanocontainer depend on the energetic profile associated with the transitions between them. This paper discusses two approaches for controlling that balance: the covalent functionalization of the nanotube sidewalls by incorporation of polar amide groups and noncovalent functionalization based on adsorption of charged fine colloid nanoparticles. Single- and triple-walled carbon nanotubes were analyzed as was the presence of cisplatin molecules encapsulated in the nanotube inner cavities. Both approaches might result in obtaining the preferred energetic bal... read less NOT USED (high confidence) S. K. Jalali, M. H. Naei, and N. Pugno, “Graphene-Based Resonant Sensors for Detection of Ultra-Fine Nanoparticles: Molecular Dynamics and Nonlocal Elasticity Investigations,” NANO. 2015. link Times cited: 34 Abstract: Application of single layered graphene sheets (SLGSs) as res… read moreAbstract: Application of single layered graphene sheets (SLGSs) as resonant sensors in detection of ultra-fine nanoparticles (NPs) is investigated via molecular dynamics (MD) and nonlocal elasticity approaches. To take into consideration the effect of geometric nonlinearity, nonlocality and atomic interactions between SLGSs and NPs, a nonlinear nonlocal plate model carrying an attached mass-spring system is introduced and a combination of pseudo-spectral (PS) and integral quadrature (IQ) methods is proposed to numerically determine the frequency shifts caused by the attached metal NPs. In MD simulations, interactions between carbon–carbon, metal–metal and metal–carbon atoms are described by adaptive intermolecular reactive empirical bond order (AIREBO) potential, embedded atom method (EAM), and Lennard–Jones (L–J) potential, respectively. Nonlocal small-scale parameter is calibrated by matching frequency shifts obtained by nonlocal and MD simulation approaches with same vibration amplitude. The influence of nonlinearity, nonlocality and distribution of attached NPs on frequency shifts and sensitivity of the SLGS sensors are discussed in detail. read less NOT USED (high confidence) Z. Ye, A. Otero-de-la-Roza, E. Johnson, and A. Martini, “Oscillatory motion in layered materials: graphene, boron nitride, and molybdenum disulfide,” Nanotechnology. 2015. link Times cited: 19 Abstract: Offset-driven self-retraction and oscillatory motion of bila… read moreAbstract: Offset-driven self-retraction and oscillatory motion of bilayer graphene has been observed experimentally and is potentially relevant for nanoscale technological applications. In a previous article, we showed that friction between laterally offset graphene layers is controlled by roughness and proposed a simple reduced-order model based on density-functional theory (DFT) and molecular dynamics (MD) data, with which predictions on the experimental size-scale could be made. In this article, we extend our study to other layered materials, with emphasis on boron nitride (BN) and molybdenum disulfide (MoS2). Using MD and DFT simulations of these systems and a generalized version of the reduced-order model, we predict that BN will exhibit behavior similar to graphene (heavily-damped oscillation with a decay rate that increases with roughness) and that MoS2 shows no oscillatory behavior even in the absence of roughness. This is attributed to the higher energy barrier for sliding in MoS2 as well as the surface structure. Our generalized reduced-order model provides a guide to predicting and tuning experimental oscillation behavior using a few parameters that can be derived from simulation data. read less NOT USED (high confidence) K. Cai, H. Cai, H. Yin, and Q. Qin, “Dynamic behavior of curved double-wall carbon nanotubes with rotating inner tube,” RSC Advances. 2015. link Times cited: 14 Abstract: It is noted that an oscillator from a curved double-walled n… read moreAbstract: It is noted that an oscillator from a curved double-walled nanotube can provide a local stronger periodic adjustable magnetic field than that from a straight double-walled carbon nanotube when the inner tube loses electric neutrality at the ends. Therefore, it is interesting to study the damped rotational and oscillatory behavior of curved double-wall carbon nanotubes (DWCNTs) through a molecular dynamics (MD) simulation approach. As the outer tube is curved, intuitionally, the intertube friction becomes stronger. Hence, the rotational and oscillatory characteristics of a single-wall carbon nanotube (SWCNT) within a curved outer tube might be obviously different from those of SWCNTs within straight DWCNTs. To investigate the effects of curvature on dynamic behavior, a straight (9, 9)/(14, 14) DWCNT is geometrically mapped into three curved bitube systems with different curvatures. In the microcanonical NVE ensemble, the inner tube with initial high speed rotation has damped rotation and oscillation along the curved axis of the outer tube. Energy transfer between two curved tubes is faster than that between two straight tubes. Further, the oscillation of the inner tube is disordered when the curvature is relatively high. The rotational frequency of an inner tube in a curved outer tube decreases more quickly than that in a straight outer tube. Effects of temperature on dynamic behavior of curved double-walled nanotubes are also investigated through a numerical example. read less NOT USED (high confidence) O. Glukhova, A. Kolesnikova, M. Slepchenkov, G. V. Savostyanov, and D. S. Shmygin, “Atomic structure of energetically stable composites, based on carbon nanotubes and graphene,” Biomedical optics. 2015. link Times cited: 0 Abstract: The investigation of energy stability of composites based on… read moreAbstract: The investigation of energy stability of composites based on graphene sheets and carbon nanotubes was investigated. The dependence of enthalpy of formation from geometry parameters, such as length and diameter of nanotubes, distance between nanotubes on graphene sheet, of composites parts, optimal geometry for most energy sustainable composites were found. read less NOT USED (high confidence) R. Mirzaeifar, Z. Qin, and M. Buehler, “Mesoscale mechanics of twisting carbon nanotube yarns.,” Nanoscale. 2015. link Times cited: 37 Abstract: Fabricating continuous macroscopic carbon nanotube (CNT) yar… read moreAbstract: Fabricating continuous macroscopic carbon nanotube (CNT) yarns with mechanical properties close to individual CNTs remains a major challenge. Spinning CNT fibers and ribbons for enhancing the weak interactions between the nanotubes is a simple and efficient method for fabricating high-strength and tough continuous yarns. Here we investigate the mesoscale mechanics of twisting CNT yarns using full atomistic and coarse grained molecular dynamics simulations, considering concurrent mechanisms at multiple length-scales. To investigate the mechanical response of such a complex structure without losing insights into the molecular mechanism, we applied a multiscale strategy. The full atomistic results are used for training a coarse grained model for studying larger systems consisting of several CNTs. The mesoscopic model parameters are updated as a function of the twist angle, based on the full atomistic results, in order to incorporate the atomistic scale deformation mechanisms in larger scale simulations. By bridging across two length scales, our model is capable of accurately predicting the mechanical behavior of twisted yarns while the atomistic level deformations in individual nanotubes are integrated into the model by updating the parameters. Our results focused on studying a bundle of close packed nanotubes provide novel mechanistic insights into the spinning of CNTs. Our simulations reveal how twisting a bundle of CNTs improves the shear interaction between the nanotubes up to a certain level due to increasing the interaction surface. Furthermore, twisting the bundle weakens the intertube interactions due to excessive deformation in the cross sections of individual CNTs in the bundle. read less NOT USED (high confidence) P. Süle and M. Szendrő, “Time-lapsed graphene moiré superlattices on Cu(1 1 1),” Modelling and Simulation in Materials Science and Engineering. 2015. link Times cited: 7 Abstract: We report classical molecular dynamics simulations (CMD) of … read moreAbstract: We report classical molecular dynamics simulations (CMD) of the moiré superlattice of graphene on Cu(1 1 1) using a new parameterized Abell–Tersoff potential for the graphene/Cu(1 1 1) interface fitted in this paper to nonlocal van der Waals density functional theory calculations. The interfacial force field with time-lapsed CMD provides superlattices in good quantitative agreement with the available experimental results. The long range coincidence supercells with nonequivalent moiré hills have also been identified and analyzed. Spot profile analysis reveals that the moiré spots are inequivalent over large areas, and their heights are randomly distributed. This result is in accordance with recent atomic force microscopy studies. Our simulations also shed light on the transient dynamics of the moiré superlattice in atomic detail. The moiré superlattice exhibits a pattern which is dynamical rather than statically pinned to the support, and can be observed mostly via time-lapsing. The instantaneous snapshots of the periodic moiré pattern at low temperature are already weakly disordered, lacking the apparent sharpness of the time-averaged pattern and of the scanning tunneling microscopy images. This suggests the existence of competition of orders—between a static (first-order) moiré superstructure and a dynamical (second-order) moiré superstructure. read less NOT USED (high confidence) M. Becton, L. Zhang, and X. Wang, “On the crumpling of polycrystalline graphene by molecular dynamics simulation.,” Physical chemistry chemical physics : PCCP. 2015. link Times cited: 29 Abstract: Crumpled graphene has been emerging as a valuable component … read moreAbstract: Crumpled graphene has been emerging as a valuable component for a variety of devices such as supercapacitors or hydrophobic surface coatings due to its geometric change from a 2D to a 3D structure accompanied by changes in its material behavior. As polycrystalline graphene is easier to produce than pristine graphene, certain applications of crumpled graphene may be better suited to polycrystalline graphene. However, the crumpling process of polycrystalline graphene and its relevant mechanical properties remain poorly understood. Here we employ molecular dynamics simulation to model the behavior of polycrystalline graphene under geometric confinement and elucidate the effect of grain size, with a focus on the mechanical stabilizing mechanisms and properties of the crumpled structures in comparison to pristine graphene. Simulation results show that crumpled polycrystalline graphene exhibits a slight negative correlation between average grain size and measured hardness, bulk modulus, and crumpled size. As the size of the grains decreases, the crumpled structures formed are harder and smaller, with sharp edges caused by the grain boundaries. These findings provide evidence towards the feasibility of using polycrystalline graphene in place of pristine graphene in applications involving crumpled carbon structures. read less NOT USED (high confidence) Z. Ding, J.-W. Jiang, Q. Pei, and Y.-W. Zhang, “In-plane and cross-plane thermal conductivities of molybdenum disulfide,” Nanotechnology. 2015. link Times cited: 67 Abstract: We investigate the in-plane and cross-plane thermal conducti… read moreAbstract: We investigate the in-plane and cross-plane thermal conductivities of molybdenum disulfide (MoS2) using non-equilibrium molecular dynamics simulations. We find that the in-plane thermal conductivity of monolayer MoS2 is about 19.76 W mK−1. Interestingly, the in-plane thermal conductivity of multilayer MoS2 is insensitive to the number of layers, which is in strong contrast to the in-plane thermal conductivity of graphene where the interlayer interaction strongly affects the in-plane thermal conductivity. This layer number insensitivity is attributable to the finite energy gap in the phonon spectrum of MoS2, which makes the phonon–phonon scattering channel almost unchanged with increasing layer number. For the cross-plane thermal transport, we find that the cross-plane thermal conductivity of multilayer MoS2 can be effectively tuned by applying cross-plane strain. More specifically, a 10% cross-plane compressive strain can enhance the thermal conductivity by a factor of 10, while a 5% cross-plane tensile strain can reduce the thermal conductivity by 90%. Our findings are important for thermal management in MoS2 based nanodevices and for thermoelectric applications of MoS2. read less NOT USED (high confidence) T. Klaver, S.-E. Zhu, M. Sluiter, and G. Janssen, “Molecular dynamics simulation of graphene on Cu (1 0 0) and (1 1 1) surfaces,” Carbon. 2015. link Times cited: 31 NOT USED (high confidence) M. Rouha and P. Cummings, “Thickness-dependent structural arrangement in nano-confined imidazolium-based ionic liquid films.,” Physical chemistry chemical physics : PCCP. 2015. link Times cited: 15 Abstract: A fundamental understanding of interfacial processes in nano… read moreAbstract: A fundamental understanding of interfacial processes in nano-confined ionic liquids is crucial to increase the performance of modern energy storage devices. It is well-known that interfaces between electrodes and ionic liquids exhibit structures distinct from that of the bulk liquid. Following the recent interest in these systems, we studied the structure of thin ionic liquid films confined in flexible uncharged carbon nano-pores by using fully-atomistic molecular dynamics simulations. We show that the interfacial ions self-assemble into a closely-packed chequerboard-like pattern, formed by both cations and anions in direct contact with the pore wall, and that within this structure we find changes dependent on the thickness of the confined films. At low coverages a dense layer is formed in which both the imidazolium-ring and its alkyl-tail lie parallel to the pore wall. With increasing coverage the alkyl-chains reorient perpendicular to the surface, making space for additional ions until a densified highly ordered layer is formed. This wall-induced self-patterning into interfacial layers with significantly higher than bulk density is consistent with recent experimental and theoretical studies of similar systems. This work reveals additional molecular-level details on the effect of the film-thickness on the structure and density of the ionic liquid. read less NOT USED (high confidence) J. M. Alred, Z. Zhang, Z. Hu, and B. Yakobson, “Interface-induced warping in hybrid two-dimensional materials,” Nano Research. 2015. link Times cited: 14 NOT USED (high confidence) X.-Y. Sun, H. Hu, C. Cao, and Y. Xu, “Anisotropic vacancy-defect-induced fracture strength loss of graphene,” RSC Advances. 2015. link Times cited: 6 Abstract: The mechanical strength of graphene is much larger than any … read moreAbstract: The mechanical strength of graphene is much larger than any other materials, but is orientation-dependent and can be significantly weakened by vacancy defects existing in the lattices. In this work, we investigated the orientational anisotropic effect on the fracture strength of vacancy-defective graphene using molecular dynamics simulations. The results show that the fracture strength of graphene at the orientation angle of 15° has the smallest sensitivity to vacancy defects due to the minimization of stress concentration in this direction. Although the fracture strength of defect-free graphene in the zigzag direction is larger than that in the armchair direction, the fracture strength in the zigzag direction is much more sensitive to the vacancy defects. This study is helpful not only for understanding the physical properties of defective graphene but also providing guidance for developing graphene-based materials or devices in engineering. read less NOT USED (high confidence) C. Li and A. Strachan, “Molecular scale simulations on thermoset polymers: A review,” Journal of Polymer Science Part B. 2015. link Times cited: 172 Abstract: This article reviews the field of molecular simula- tions of… read moreAbstract: This article reviews the field of molecular simula- tions of thermoset polymers. This class of polymers is of inter- est in applications ranging from structural components for aerospace to electronics packaging and predictive simulations of their response is playing an increasing role in understanding the molecular origin of their properties and complementing experiments in the search for tailored materials for specific applications. It focuses on modeling and simulation of the pro- cess of curing to predict the molecular structure of these poly- mers and their thermomechanical response by all-atom molecular dynamics simulations. Results from Monte Carlo and coarse-grained simulations are briefly summarized. V C 2014 Wiley Periodicals, Inc. J. Polym. Sci., Part B: Polym. Phys. 2014, 00, 000-000 read less NOT USED (high confidence) T. C. O’Connor, J. Andzelm, and M. Robbins, “AIREBO-M: a reactive model for hydrocarbons at extreme pressures.,” The Journal of chemical physics. 2015. link Times cited: 189 Abstract: The Adaptive Intermolecular Reactive Empirical Bond Order po… read moreAbstract: The Adaptive Intermolecular Reactive Empirical Bond Order potential (AIREBO) for hydrocarbons has been widely used to study dynamic bonding processes under ambient conditions. However, its intermolecular interactions are modeled by a Lennard-Jones (LJ) potential whose unphysically divergent power-law repulsion causes AIREBO to fail when applied to systems at high pressure. We present a modified potential, AIREBO-M, where we have replaced the singular Lennard-Jones potential with a Morse potential. We optimize the new functional form to improve intermolecular steric repulsions, while preserving the ambient thermodynamics of the original potentials as much as possible. The potential is fit to experimental measurements of the layer spacing of graphite up to 14 GPa and first principles calculations of steric interactions between small alkanes. To validate AIREBO-M's accuracy and transferability, we apply it to a graphite bilayer and orthorhombic polyethylene. AIREBO-M gives bilayer compression consistent with quantum calculations, and it accurately reproduces the quasistatic and shock compression of orthorhombic polyethlyene up to at least 40 GPa. read less NOT USED (high confidence) L. Zhang, M. Becton, and X. Wang, “Mechanical analysis of graphene-based woven nano-fabric,” Materials Science and Engineering A-structural Materials Properties Microstructure and Processing. 2015. link Times cited: 18 NOT USED (high confidence) M. U. Kucukkal and S. Stuart, “Simulation of carbon nanotube welding through Ar bombardment,” Journal of Molecular Modeling. 2014. link Times cited: 4 NOT USED (high confidence) S. Svatek et al., “Adsorbate-Induced Curvature and Stiffening of Graphene,” Nano Letters. 2014. link Times cited: 25 Abstract: The adsorption of the alkane tetratetracontane (TTC, C44H90)… read moreAbstract: The adsorption of the alkane tetratetracontane (TTC, C44H90) on graphene induces the formation of a curved surface stabilized by a gain in adsorption energy. This effect arises from a curvature-dependent variation of a moiré pattern due to the mismatch of the carbon–carbon separation in the adsorbed molecule and the period of graphene. The effect is observed when graphene is transferred onto a deformable substrate, which in our case is the interface between water layers adsorbed on mica and an organic solvent, but is not observed on more rigid substrates such as boron nitride. Our results show that molecular adsorption can be influenced by substrate curvature, provide an example of two-dimensional molecular self-assembly on a soft, responsive interface, and demonstrate that the mechanical properties of graphene may be modified by molecular adsorption, which is of relevance to nanomechanical systems, electronics, and membrane technology. read less NOT USED (high confidence) B. Cheng and M. Ceriotti, “Direct path integral estimators for isotope fractionation ratios.,” The Journal of chemical physics. 2014. link Times cited: 36 Abstract: Fractionation of isotopes among distinct molecules or phases… read moreAbstract: Fractionation of isotopes among distinct molecules or phases is a quantum effect which is often exploited to obtain insights on reaction mechanisms, biochemical, geochemical, and atmospheric phenomena. Accurate evaluation of isotope ratios in atomistic simulations is challenging, because one needs to perform a thermodynamic integration with respect to the isotope mass, along with time-consuming path integral calculations. By re-formulating the problem as a particle exchange in the ring polymer partition function, we derive new estimators giving direct access to the differential partitioning of isotopes, which can simplify the calculations by avoiding thermodynamic integration. We demonstrate the efficiency of these estimators by applying them to investigate the isotope fractionation ratios in the gas-phase Zundel cation, and in a few simple hydrocarbons. read less NOT USED (high confidence) T. L. Jensen, J. Moxnes, E. Unneberg, and O. Dullum, “Calculation of Decomposition Products from Components of Gunpowder by using ReaxFF Reactive Force Field Molecular Dynamics and Thermodynamic Calculations of Equilibrium Composition,” Propellants, Explosives, Pyrotechnics. 2014. link Times cited: 8 Abstract: Jensen, Tomas Lunde; Moxnes, John Fredrik; Unneberg, Erik; D… read moreAbstract: Jensen, Tomas Lunde; Moxnes, John Fredrik; Unneberg, Erik; Dullum, Ove.
Calculation of decomposition products from components of gunpowder by using ReaxFF reactive force field molecular dynamics and thermodynamic calculations of equilibrium composition. Propellants, explosives, pyrotechnics 2014 ;Volum 39.(6) s. 830-837 read less NOT USED (high confidence) K. Endo, K. Hayashi, T. Ida, and T. Takemura, “IR and Py-GC/MS spectral simulation of polymer film by quantum chemical and quantum molecular dynamics calculations using the polymer models,” Russian Journal of Physical Chemistry A. 2014. link Times cited: 3 NOT USED (high confidence) X. Chen, L. Zhang, Y. Zhao, X. Wang, and C. Ke, “Graphene folding on flat substrates,” Journal of Applied Physics. 2014. link Times cited: 43 Abstract: We present a combined experimental-theoretical study of grap… read moreAbstract: We present a combined experimental-theoretical study of graphene folding on flat substrates. The structure and deformation of the folded graphene sheet are experimentally characterized by atomic force microscopy. The local graphene folding behaviors are interpreted based on nonlinear continuum mechanics modeling and molecular dynamics simulations. Our study on self-folding of a trilayer graphene sheet reports a bending stiffness of about 6.57 eV, which is about four times the reported values for monolayer graphene. Our results reveal that an intriguing free sliding phenomenon occurs at the interlayer van der Waals interfaces during the graphene folding process. This work demonstrates that it is a plausible venue to quantify the bending stiffness of graphene based on its self-folding conformation on flat substrates. The findings reported in this work are useful to a better understanding of the mechanical properties of graphene and in the pursuit of its applications. read less NOT USED (high confidence) X. Song, J. Liu, H. Li, and L. Zhao, “Atomistic simulation of electrical enhanced nanowelding of carbon nanotube to metal,” Microsystem Technologies. 2014. link Times cited: 0 NOT USED (high confidence) S. K. Schnell, R. Skorpa, D. Bedeaux, S. Kjelstrup, T. Vlugt, and J. Simon, “Partial molar enthalpies and reaction enthalpies from equilibrium molecular dynamics simulation.,” The Journal of chemical physics. 2014. link Times cited: 24 Abstract: We present a new molecular simulation technique for determin… read moreAbstract: We present a new molecular simulation technique for determining partial molar enthalpies in mixtures of gases and liquids from single simulations, without relying on particle insertions, deletions, or identity changes. The method can also be applied to systems with chemical reactions. We demonstrate our method for binary mixtures of Weeks-Chandler-Anderson particles by comparing with conventional simulation techniques, as well as for a simple model that mimics a chemical reaction. The method considers small subsystems inside a large reservoir (i.e., the simulation box), and uses the construction of Hill to compute properties in the thermodynamic limit from small-scale fluctuations. Results obtained with the new method are in excellent agreement with those from previous methods. Especially for modeling chemical reactions, our method can be a valuable tool for determining reaction enthalpies directly from a single MD simulation. read less NOT USED (high confidence) V. A. Saroka, K. Batrakov, and L. Chernozatonskii, “Edge-modified zigzag-shaped graphene nanoribbons: Structure and electronic properties,” Physics of the Solid State. 2014. link Times cited: 23 NOT USED (high confidence) F. Rose et al., “Complete characterization by Raman spectroscopy of the structural properties of thin hydrogenated diamond-like carbon films exposed to rapid thermal annealing,” Journal of Applied Physics. 2014. link Times cited: 70 Abstract: We have demonstrated that multi-wavelength Raman and photolu… read moreAbstract: We have demonstrated that multi-wavelength Raman and photoluminescence spectroscopies are sufficient to completely characterize the structural properties of ultra-thin hydrogenated diamond-like carbon (DLC:H) films subjected to rapid thermal annealing (RTA, 1 s up to 659 °C) and to resolve the structural differences between films grown by plasma-enhanced chemical vapor deposition, facing target sputtering and filtered cathodic vacuum arc with minute variations in values of mass density, hydrogen content, and sp3 fraction. In order to distinguish unequivocally between films prepared with different density, thickness, and RTA treatment, a new method for analysis of Raman spectra was invented. This newly developed analysis method consisted of plotting the position of the Raman G band of carbon versus its full width at half maximum. Moreover, we studied the passivation of non-radiative recombination centers during RTA by performing measurements of the increase in photoluminescence in conjunction with the analysis of DLC:H networks simulated by molecular dynamics. The results show that dangling bond passivation is primarily a consequence of thermally-induced sp2 clustering rather than hydrogen diffusion in the film. read less NOT USED (high confidence) A. M. Christmann and A. R. Muniz, “DETERMINAÇÃO DAS PROPRIEDADES MECÂNICAS DE NANOMALHAS DE GRAFENO POR SIMULAÇÃO MOLECULAR.” 2014. link Times cited: 0 Abstract: RESUMO –Nanomalhas de grafeno sao nanoestruturas formadas a … read moreAbstract: RESUMO –Nanomalhas de grafeno sao nanoestruturas formadas a partir da insercao de poros em lâminas de grafeno, recentemente em laboratorio. Aplicacoes em diversas areas vem sendo propostas, como por exemplo, em nanoeletronica e nanofiltracao. Entretanto, pouco se sabe sobre o efeito da criacao destes defeitos estruturais nas propriedades mecânicas do grafeno. O objetivo deste trabalho e avaliar o impacto destas mudancas estruturais nas propriedades mecânicas do material, atraves de simulacoes de dinâmica molecular. Sao estimados o modulo de Young e a tensao e deformacao de ruptura em testes de tracao uniaxial, variando-se parâmetros estruturais do material (densidade e distribuicao dos poros). Os resultados mostram que o aumento da porosidade diminui a resistencia mecânica do grafeno, porem os valores estimados para as propriedades se mantem na mesma ordem de magnitude em relacao ao material original, apresentando-se superior a materiais convencionais. read less NOT USED (high confidence) L. Radosinski and B. Kuchta, “Hydrogen chemisorption on carbon structure with mixed sp2–sp3 hybridization: empirical potential studies,” Adsorption. 2014. link Times cited: 11 NOT USED (high confidence) M. Becton, L. Zhang, and X. Wang, “Molecular Dynamics Study of Programmable Nanoporous Graphene,” Journal of Nanomechanics and Micromechanics. 2014. link Times cited: 17 Abstract: AbstractNanoporous graphene has emerged as a powerful altern… read moreAbstract: AbstractNanoporous graphene has emerged as a powerful alternative to conventional membrane filters and gained an appreciable popularity in a variety of applications because of its many remarkable and unique properties. Careful regulation of the size and density of nanopores can generate graphene membranes with controllable selectivity and flow rate, thereby greatly enhancing the potential marketability of graphene-based membranes. In this research, molecular dynamics simulation is employed to systematically investigate the mechanistic and quantitative effect of significant parameters such as temperature, impact energy, strain, and pore density on the nanopore morphology of graphene by impacting fullerenes into a graphene sheet. Simulation results have demonstrated that both nanopore size and morphology in a graphene sheet can be tailored by carefully controlling the energy of the impact cluster, the temperature of the environment, and the strain applied on the graphene sheet. This serves as a conceptual g... read less NOT USED (high confidence) S. B. Kylasa, H. Aktulga, and A. Grama, “PuReMD-GPU: A reactive molecular dynamics simulation package for GPUs,” J. Comput. Phys. 2014. link Times cited: 49 NOT USED (high confidence) R. Skorpa, J. Simon, D. Bedeaux, and S. Kjelstrup, “The reaction enthalpy of hydrogen dissociation calculated with the Small System Method from simulation of molecular fluctuations.,” Physical chemistry chemical physics : PCCP. 2014. link Times cited: 9 Abstract: We show how we can find the enthalpy of a chemical reaction … read moreAbstract: We show how we can find the enthalpy of a chemical reaction under non-ideal conditions using the Small System Method to sample molecular dynamics simulation data for fluctuating variables. This method, created with Hill's thermodynamic analysis, is used to find properties in the thermodynamic limit, such as thermodynamic correction factors, partial enthalpies, volumes, heat capacities and compressibility. The values in the thermodynamic limit at (T,V, μj) are then easily transformed into other ensembles, (T,V,Nj) and (T,P,Nj), where the last ensemble gives the partial molar properties which are of interest to chemists. The dissociation of hydrogen from molecules to atoms was used as a convenient model system. Molecular dynamics simulations were performed with three densities; ρ = 0.0052 g cm(-3) (gas), ρ = 0.0191 g cm(-3) (compressed gas) and ρ = 0.0695 g cm(-3) (liquid), and temperatures in the range; T = 3640-20,800 K. The enthalpy of reaction was observed to follow a quadratic trend as a function of temperature for all densities. The enthalpy of reaction was observed to only have a small pressure dependence. With a reference point close to an ideal state (T = 3640 K and ρ = 0.0052 g cm(-3)), we were able to calculate the thermodynamic equilibrium constant, and thus the deviation from ideal conditions for the lowest density. We found the thermodynamic equilibrium constant to increase with increasing temperature, and to have a negligible pressure dependence. Taking the enthalpy variation into account in the calculation of the thermodynamic equilibrium constant, we found the ratio of activity coefficients to be in the order of 0.7-1.0 for the lowest density, indicating repulsive forces between H and H2. This study shows that the compressed gas- and liquid density values at higher temperatures are far from those calculated under ideal conditions. It is important to have a method that can give access to partial molar properties, independent of the ideality of the reacting mixture. Our results show how this can be achieved with the use of the Small System Method. read less NOT USED (high confidence) Y. Li, K.-A. N. Duerloo, and E. Reed, “Strain engineering in monolayer materials using patterned adatom adsorption.,” Nano letters. 2014. link Times cited: 10 Abstract: We utilize reactive empirical bond order (REBO)-based intera… read moreAbstract: We utilize reactive empirical bond order (REBO)-based interatomic potentials to explore the potential for the engineering of strain in monolayer materials using lithographically or otherwise patterned adatom adsorption. In the context of graphene, we discover that the monolayer strain results from a competition between the in-plane elasticity and out-of-plane relaxation deformations. For hydrogen adatoms on graphene, the strain outside the adsorption region vanishes due to out-of-plane relaxation deformations. Under some circumstances, an annular adsorption pattern generates homogeneous tensile strains of approximately 2% in graphene inside the adsorption region, approximately 30% of the strain in the adsorbed region. We find that an elliptical adsorption pattern produces strains of as large as 5%, close to the strain in the adsorbed region. Also, nonzero maximum shear strain (∼ 4%) can be introduced by the elliptical adsorption pattern. We find that an elastic plane stress model provides qualitative guidance for strain magnitudes and conditions under which strain-diminishing buckling can be avoided. We identify geometric conditions under which this effect has potential to be scaled to larger areas. Our results elucidate a method for strain engineering at the nanoscale in monolayer devices. read less NOT USED (high confidence) A. Galashev and V. Polukhin, “Removal of copper from graphene by bombardment with argon clusters: Computer experiment,” The Physics of Metals and Metallography. 2014. link Times cited: 22 NOT USED (high confidence) J. Park, J. Han, and S. Im, “Coarse-graining of cohesive zone at interface of amorphous material,” Journal of Mechanical Science and Technology. 2014. link Times cited: 3 NOT USED (high confidence) L. Yang, J. Chen, N. Yang, and B. Li, “Significant Reduction of Graphene Thermal Conductivity by Phononic Crystal Structure,” International Journal of Heat and Mass Transfer. 2014. link Times cited: 86 NOT USED (high confidence) S. Lee and W. Lu, “Controlling the number of graphene sheets exfoliated from graphite by designed normal loading and frictional motion,” Journal of Applied Physics. 2014. link Times cited: 8 Abstract: We use molecular dynamics to study the exfoliation of patter… read moreAbstract: We use molecular dynamics to study the exfoliation of patterned nanometer-sized graphite under various normal loading conditions for friction-induced exfoliation. Using highly ordered pyrolytic graphite (HOPG) as well as both amorphous and crystalline SiO2 substrate as example systems, we show that the exfoliation process is attributed to the corrugation of the HOPG surface and the atomistic roughness of the substrate when they contact under normal loading. The critical normal strain, at which the exfoliation occurs, is higher on a crystalline substrate than on an amorphous substrate. This effect is related to the atomistic flatness and stiffness of the crystalline surface. We observe that an increase of the van der Waals interaction between the graphite and the substrate results in a decrease of the critical normal strain for exfoliation. We find that the magnitude of the normal strain can effectively control the number of exfoliated graphene layers. This mechanism suggests a promising approach of applyi... read less NOT USED (high confidence) X. Hong, Z. Wu, L. Chen, F. Wu, L. Wei, and W. Yuan, “Hydrogel Microneedle Arrays for Transdermal Drug Delivery,” Nano-Micro Letters. 2014. link Times cited: 74 NOT USED (high confidence) R. E. Roman and S. W. Cranford, “Strength and Toughness of Graphdiyne/Copper Nanocomposites,” Advanced Engineering Materials. 2014. link Times cited: 20 Abstract: The recent studies on graphene – an atomistically thin metho… read moreAbstract: The recent studies on graphene – an atomistically thin methods. Pei studied the elastic and electronic properties, and monolayer of carbon atoms isolated from graphite in 2004 – and its exceptional properties has motivated further investigation of similar two-dimensional systems, including allcarbon allotropes of graphene. One such recently emerging allotrope is so-called graphdiyne (Figure 1), which belongs to the family of graphynes, proposed by Haley et al., and recently investigated.. The framework of graphdiyne and graphynes in general consist of characteristic hexagonal carbon rings connected by acetylenic linkages (e.g., [ C1⁄4C ]), specifically diacetylenic in the case of graphdiyne. Presently, thin films of graphdiyne have been successfully fabricated on a copper (Cu) substrate by a cross-coupling reaction using hexaethynylbenzene. In the process, the Cu foil serves as both the catalyst and substrate for growing the graphdiyne films. Although the mechanical performance of graphdiyne is noticeably inferior to graphene, the graphdiyne structure is predicted to be the most synthetically approachable, and the most stable diacetylenic non-natural carbon allotrope. It has been found that graphdiyne exhibits semiconductive characteristics and, advantageously, the natural band gap in graphdiyne, which can vary as a function of directional anisotropy, is similar to that of silicon and makes it the possible supplant material to silicon electronic devices. The possible applications of graphdiyne sheets and nanoribbons due to its promising properties include nanoelectronics, energy storage, anode materials in batteries, for hydrogen storage, or as membranes for gases separation. That being said, the successful implementation of graphdiyne in novel nanotechnological applications requires a thorough understanding of the mechanical properties of the material beyond stability (e.g., the potential strain-engineering of the band gap). The mechanical properties of monolayer graphdiyne have been reported by a few previous reports using computational read less NOT USED (high confidence) V. Vijayaraghavan and C. Wong, “Torsional Characteristics of SingleWalled Carbon Nanotube with Water Interactions by Using Molecular Dynamics Simulation,” Nano-Micro Letters. 2014. link Times cited: 35 NOT USED (high confidence) J. Park, J. Han, and S. Im, “Coarse-graining of cohesive zone at interface of amorphous material,” Journal of Mechanical Science and Technology. 2014. link Times cited: 0 NOT USED (high confidence) O. Glukhova, A. Kolesnikova, M. Slepchenkov, and V. Shunaev, “Moving of fullerene between potential wells in the external icosahedral shell,” Journal of Computational Chemistry. 2014. link Times cited: 3 Abstract: The results of the theoretical investigation of the behavior… read moreAbstract: The results of the theoretical investigation of the behavior of fullerenes C20 and C60 inside the icosahedral external shell on example of carbon nanoclusters, C20@С240 and C60@С540, are presented in this article. The multiwell potential of interaction between fullerenes in investigated nanoclusters is calculated to reveal the regularities of moving for internal fullerene in the field of holding potential of the external shell. The possible variants of fullerenes C20 and C60 moving between the potential wells are predicted on base of topology data of the fullerenes relative positioning in nanoparticle and analysis of relief of the energy surface of interaction between fullerenes. The formulated prediction is confirmed by the data of the numerical experiment. The investigation of two‐shell fullerenes allows to conclude that the light fullerene С20 will probably jump between the potential wells already at small temperatures (139–400 K) if the external shell is slightly bigger. © 2014 Wiley Periodicals, Inc. read less NOT USED (high confidence) L. Zhang and X. Wang, “Tailoring Pull-out Properties of Single-Walled Carbon Nanotube Bundles by Varying Binding Structures through Molecular Dynamics Simulation.,” Journal of chemical theory and computation. 2014. link Times cited: 9 Abstract: Single-walled carbon nanotubes (SWCNTs) have demonstrated a … read moreAbstract: Single-walled carbon nanotubes (SWCNTs) have demonstrated a remarkable capacity for self-assembly into nanobundles through intermolecular van der Waals interactions, bestowing these agglomerates extraordinary mechanical, thermal, and electrical properties. However, how to improve the binding ability of SWCNT bundles to mitigate the delamination and sliding effects between individual nanotubes remains to be further investigated. By utilizing molecular dynamics simulation, here we present the construction of SWCNT bundles with discrete cylindrical and continuous helical binders by noncovalent coating of the bundle surface with sp(2)-hybridized carbon networks. Meanwhile, by modifying the binding potentials between the binder and SWCNT bundles to mimic the different binding types actually used, the bound SWCNT bundle presents a variety of distinct mechanical properties unmatched by unbound bundles. The pull-out tests with discrete binders portray an intriguing force-displacement curve which can help determine the number of discrete binders used in the system. SWCNT bundles with binders depict unique mechanical properties which can differentiate them from unbound SWCNT bundles. These findings provide compelling evidence that bound SWCNT bundles will open up novel avenues for a variety of applications, especially in nanocomposites. read less NOT USED (high confidence) Y. Feng, J. Zhu, and D. Tang, “Influence of chirality on the thermal conductivity of single-walled carbon nanotubes,” Chinese Physics B. 2014. link Times cited: 12 Abstract: The influence of chirality on the thermal conductivity of si… read moreAbstract: The influence of chirality on the thermal conductivity of single-walled carbon nanotubes (SWNTs) is discussed in this paper, using a non-equilibrium molecular dynamics (NEMD) method. The tube lengths of the SWNTs studied here are 20, 50, and 100 nm, respectively, and at each length the relationship between chiral angle and thermal conductivity of a SWNT is revealed. We find that if the tube length is relatively short, the influence of chirality on the thermal conductivity of a SWNT is more obvious and that a SWNT with a larger chiral angle has a greater thermal conductivity. Moreover, the thermal conductivity of a zigzag SWNT is smaller than that of an armchair one. As the tube length becomes longer, the thermal conductivity increases while the influence of chirality on the thermal conductivity decreases. read less NOT USED (high confidence) N. Wang and K. Komvopoulos, “The effect of deposition energy of energetic atoms on the growth and structure of ultrathin amorphous carbon films studied by molecular dynamics simulations,” Journal of Physics D: Applied Physics. 2014. link Times cited: 14 Abstract: The growth and structure of ultrathin amorphous carbon films… read moreAbstract: The growth and structure of ultrathin amorphous carbon films was investigated by molecular dynamics simulations. The second-generation reactive-empirical-bond-order potential was used to model atomic interactions. Films with different structures were simulated by varying the deposition energy of carbon atoms in the range of 1–120 eV. Intrinsic film characteristics (e.g. density and internal stress) were determined after the system reached equilibrium. Short- and intermediate-range carbon atom ordering is examined in the context of atomic hybridization and ring connectivity simulation results. It is shown that relatively high deposition energy (i.e., 80 eV) yields a multilayer film structure consisting of an intermixing layer, bulk film and surface layer, consistent with the classical subplantation model. The highest film density (3.3 g cm−3), sp3 fraction (∼43%), and intermediate-range carbon atom ordering correspond to a deposition energy of ∼80 eV, which is in good agreement with experimental findings. read less NOT USED (high confidence) F. Soberon, “Surface activation of cyclo olefin polymer by oxygen plasma discharge: a molecular dynamics study,” Modelling and Simulation in Materials Science and Engineering. 2014. link Times cited: 3 Abstract: Thermoplastic substrates made of cyclo olefin polymer (COP) … read moreAbstract: Thermoplastic substrates made of cyclo olefin polymer (COP) are treated with oxygen plasma discharges to introduce polar groups at the surface. This is the first step in the process of surface functionalization of COP substrates used in biosensor devices. A molecular dynamics model of basic COP structure is implemented using the second-generation reactive empirical bond order (REBO) potentials for hydrocarbon–oxygen interactions. The model includes covalent bond and Van der Waals interactions. The bombardment of a COP surface with mono-energetic atomic oxygen ions, energy in the range 1-35 eV, is simulated and reported here. The dynamics of the substrate modification reveals that the substrate top layer is de-hydrogenated and subsequently builds up an oxygen–carbon matrix layer, ∼10 Å thick. Analysis of the modified substrates indicates that surface yield is predominantly peroxide groups. read less NOT USED (high confidence) D. Hlaváč, “Modeling the Interaction of Nanoparticles with Biomembranes: A Review,” Transactions of the VŠB: Technical University of Ostrava, Safety Engineering Series. 2014. link Times cited: 0 Abstract: 1 VŠB Technical University of Ostrava, IT4Innovations, Ostra… read moreAbstract: 1 VŠB Technical University of Ostrava, IT4Innovations, Ostrava, Czech Republic, dominik.hlavac@vsb.cz Abstract: Nowadays, with a growing number of produced nanoparticles, the question related to human and environmental safety arises. Because of their small dimensions, nanoparticles may overcome biological membranes more easily. The detailed pathway is still not understood well and, therefore, toxic potential of many nanoparticles remains unclear. Although several experimental techniques are able to capture changes in biomembranes, many effects may be effectively studied only using computational modeling. Therefore, in the fi rst part of this article, basic experimental and simulation methods often used in the study of nanoparticle-biomembrane interaction will be shortly introduced, and, in the following part, the most recent relevant modeling studies published since 2008 will be reviewed with an emphasis on key factors playing role in nanoparticle-biomembrane interaction. read less NOT USED (high confidence) B. Mortazavi and G. Cuniberti, “Atomistic modeling of mechanical properties of polycrystalline graphene,” Nanotechnology. 2014. link Times cited: 86 Abstract: We performed molecular dynamics (MD) simulations to investig… read moreAbstract: We performed molecular dynamics (MD) simulations to investigate the mechanical properties of polycrystalline graphene. By constructing molecular models of ultra-fine-grained graphene structures, we studied the effect of different grain sizes of 1–10 nm on the mechanical response of graphene. We found that the elastic modulus and tensile strength of polycrystalline graphene decrease with decreasing grain size. The calculated mechanical proprieties for pristine and polycrystalline graphene sheets are found to be in agreement with experimental results in the literature. Our MD results suggest that the ultra-fine-grained graphene structures can show ultrahigh tensile strength and elastic modulus values that are very close to those of pristine graphene sheets. read less NOT USED (high confidence) X. Liu, G. Zhang, and Y.-W. Zhang, “Thermal Conduction Across Graphene Cross-Linkers,” Journal of Physical Chemistry C. 2014. link Times cited: 44 Abstract: Controlling the thermal conduction across graphene layers is… read moreAbstract: Controlling the thermal conduction across graphene layers is of great importance for their applications in nanoscale thermal management. However, how to quantitatively control the thermal conduction across the graphene layers is still largely unknown. Here, we performed molecular dynamics simulations to investigate the thermal transport across a junction formed by covalent cross-linkers between two graphene nanoribbons (GNRs). We find that the cross-linkers are effective for transmitting the out-of-plane phonon modes of GNRs, but ineffective for the in-plane modes. Each cross-linker possesses a constant thermal conductance, and there is little thermal coupling between them. Interestingly, the total heat current across the junction is not linearly dependent on the number of cross-linkers; instead, it increases sublinearly initially, and then levels off to about 50% of that of the same size single-layer GNR. A theoretical model is proposed to explain this surprising observation. Our work reveals important n... read less NOT USED (high confidence) J. Wang, D. Chen, J. Wallace, J. Gigax, X. Wang, and L. Shao, “Introducing thermally stable inter-tube defects to assist off-axial phonon transport in carbon nanotube films,” Applied Physics Letters. 2014. link Times cited: 12 Abstract: Through integrated molecular dynamics (MD) simulations and e… read moreAbstract: Through integrated molecular dynamics (MD) simulations and experimental studies, we demonstrated the feasibility of an ion-irradiation-and-annealing based phonon engineering technique to enhance thermal conductivity of carbon nanotube (CNT) films. Upon ion irradiation of CNT films, both inter-tube defects and intra-tube defects are introduced. Our MD simulations show that inter-tube defects created between neighboring tubes are much more stable than intra-tube defects created on tube graphitic planes. Upon thermal annealing, intra-tube defects are preferentially removed but inter-tube defects stay. Consequently, axial phonon transport increases due to reduced phonon scattering and off-axial phonon transport is sustained due to the high stability of inter-tube defects, leading to a conductivity enhancement upon annealing. The modeling predictions agree with experimental observations that thermal conductivities of CNT films were enhanced after 2 MeV hydrogen ion irradiations and conductivities were further enhanced upon post irradiation annealing. read less NOT USED (high confidence) Y. Magnin, G. D. Förster, F. Rabilloud, F. Calvo, A. Zappelli, and C. Bichara, “Thermal expansion of free-standing graphene: benchmarking semi-empirical potentials,” Journal of Physics: Condensed Matter. 2014. link Times cited: 55 Abstract: The thermodynamical properties of free-standing graphene hav… read moreAbstract: The thermodynamical properties of free-standing graphene have been investigated under constant zero pressure as a function of temperature using Monte Carlo simulations. A variety of atomistic models have been used, including the simple three-body Stillinger potential and a series of bond-order many-body potentials based on the Tersoff–Brenner seminal models, with recent reparametrizations dedicated to graphene, extensions to medium-range or long-range dispersion corrections. In addition, we have also tested a tight-binding potential in the fourth-moment approximation. The simulations reveal significant discrepancies in the in-plane lattice parameter and the thermal expansion coefficient, which despite showing monotonically increasing variations with temperature, can be positive, negative or change sign at moderate temperature depending on the potential. Comparison with existing experimental and theoretical data obtained from complementary approaches indicates that empirical potentials limited to nearest-neighbour interactions give rather dispersed results, and that van der Waals corrections generally tend to flatten the variations of the in-plane lattice constant, in contradiction with experiment. Only the medium-range corrected potentials of Los and Fasolino, as well as the tight-binding model in the fourth-moment approximation, are reasonably close to the reference results near room temperature. Our results suggest that classical potentials should be used with caution for thermal properties. read less NOT USED (high confidence) R. Nazemnezhad, H. Shokrollahi, and S. Hosseini-Hashemi, “Sandwich beam model for free vibration analysis of bilayer graphene nanoribbons with interlayer shear effect,” Journal of Applied Physics. 2014. link Times cited: 25 Abstract: In this study, sandwich beam model (SM) is proposed for free… read moreAbstract: In this study, sandwich beam model (SM) is proposed for free vibration analysis of bilayer graphene nanoribbons (BLGNRs) with interlayer shear effect. This model also takes into account the intralayer (in-plane) stretch of graphene nanoribbons. The molecular dynamics (MD) simulations using the software LAMMPS and Adaptive Intermolecular Reactive Empirical Bond Order (AIREBO) potential are done to validate the accuracy of the sandwich model results. The MD simulation results include the two first frequencies of cantilever BLGNRs with different lengths and two interlayer shear moduli, i.e., 0.25 and 4.6 GPa. These two interlayer shear moduli, 0.25 and 4.6 GPa, can be obtained by sliding a small flake of graphene on a large graphene substrate when the parameter of E_LJ term in AIREBO potential, epsilon_CC, is set to be 2.84 and 45.44 meV, respectively. The SM results for a wide range of bending rigidity values show that the proposed model, i.e., the SM, predicts much better than the previous beam model in wh... read less NOT USED (high confidence) N. Liu, Y.-gang Wang, M. Li, and J. Jia, “Nonlinear buckling analyses of a small-radius carbon nanotube,” Journal of Applied Physics. 2014. link Times cited: 5 Abstract: Carbon nanotube (CNT) was first discovered by Sumio Iijima. … read moreAbstract: Carbon nanotube (CNT) was first discovered by Sumio Iijima. It has aroused extensive attentions of scholars from all over the world. Over the past two decades, we have acquired a lot of methods to synthesize carbon nanotubes and learn their many incredible mechanical properties such as experimental methods, theoretical analyses, and computer simulations. However, the studies of experiments need lots of financial, material, and labor resources. The calculations will become difficult and time-consuming, and the calculations may be even beyond the realm of possibility when the scale of simulations is large, as for computer simulations. Therefore, it is necessary for us to explore a reasonable continuum model, which can be applied into nano-scale. This paper attempts to develop a mathematical model of a small-radius carbon nanotube based on continuum theory. An Isotropic circular cross-section, Timoshenko beam model is used as a simplified mechanical model for the small-radius carbon nanotube. Theoretical par... read less NOT USED (high confidence) S. Hartmann et al., “Quantitative in-situ scanning electron microscope pull-out experiments and molecular dynamics simulations of carbon nanotubes embedded in palladium,” Journal of Applied Physics. 2014. link Times cited: 16 Abstract: In this paper, we present our results of experimental and nu… read moreAbstract: In this paper, we present our results of experimental and numerical pull-out tests on carbon nanotubes (CNTs) embedded in palladium. We prepared simple specimens by employing standard silicon wafers, physical vapor deposition of palladium and deposition of CNTs with a simple drop coating technique. An AFM cantilever with known stiffness connected to a nanomanipulation system was utilized inside a scanning electron microscope (SEM) as a force sensor to determine forces acting on a CNT during the pull-out process. SEM-images of the cantilever attached to a CNT have been evaluated for subsequent displacement steps with greyscale correlation to determine the cantilever deflection. We compare the experimentally obtained pull-out forces with values of numerical investigations by means of molecular dynamics and give interpretations for deviations according to material impurities or defects and their influence on the pull-out data. We find a very good agreement of force data from simulation and experiment, which is 17 nN and in the range of 10–61 nN, respectively. Our findings contribute to the ongoing research of the mechanical characterization of CNT-metal interfaces. This is of significant interest for the design of future mechanical sensors utilizing the intrinsic piezoresistive effect of CNTs or other future devices incorporating CNT-metal interfaces. read less NOT USED (high confidence) Y. Wang, A. Vallabhaneni, B. Qiu, and X. Ruan, “Two-Dimensional Thermal Transport in Graphene: A Review of Numerical Modeling Studies,” Nanoscale and Microscale Thermophysical Engineering. 2014. link Times cited: 54 Abstract: This article reviews recent numerical studies of thermal tra… read moreAbstract: This article reviews recent numerical studies of thermal transport in graphene, with a focus on molecular dynamics simulation, the atomistic Green’s function method, and the phonon Boltzmann transport equation method. The mode-wise phonon contribution to the intrinsic thermal conductivity (κ) of graphene and the effects of extrinsic mechanisms—for example, substrate, isotope, impurities, and defects—on κ are discussed. We also highlight the insights from numerical studies aimed at bridging the gaps between 1D, 2D, and 3D thermal transport in carbon nanotubes/graphene nanoribbons, graphene, and graphite. Numerical studies on thermal transport across the interface between graphene and other materials and nonlinear thermal transport phenomena such as thermal rectification and negative differential thermal resistance are also reviewed. read less NOT USED (high confidence) J.-M. Leyssale and G. Vignoles, “A Large-Scale Molecular Dynamics Study of the Divacancy Defect in Graphene,” Journal of Physical Chemistry C. 2014. link Times cited: 39 Abstract: We report on the dynamical behavior of single divacancy defe… read moreAbstract: We report on the dynamical behavior of single divacancy defects in large graphene sheets as studied by extensive classical molecular dynamics (MD) simulations at high temperatures and static calculations. In the first part of the paper, the ability of the used interatomic potential to properly render the stability and dynamics (energy barriers) of such defects is validated against electronic structure calculations from the literature. Then, results from MD simulations are presented. In agreement with recent TEM studies, some mobility is observed through a series of Stone–Wales-like bond rotations involving the 5–8–5, 555–777, and 5555–6–7777 reconstructions. Although these three structures are by far the most probable structures of the DV defect, not less than 18 other full reconstructions, including the experimentally observed 55–66–77 defect, were occasionally observed in the ≈1.5 μs of MD trajectories analyzed in this work. Most of these additional reconstructions have moderate formation energies and c... read less NOT USED (high confidence) C. Mücksch, C. Anders, H. Gnaser, and H. Urbassek, “Dynamics of l-Phenylalanine Sputtering by Argon Cluster Bombardment,” Journal of Physical Chemistry C. 2014. link Times cited: 20 Abstract: We simulate the impact of an Ar1000 cluster (energy 10 keV, … read moreAbstract: We simulate the impact of an Ar1000 cluster (energy 10 keV, impact angle 55°) into an amorphous l-phenylalanine target. By use of a ReaxFF potential, it is possible to model not only the emission dynamics of intact Phe molecules but also the fragmentation and reaction pathways taken. The simulated sputter yield is in close agreement with experiment. The simulated emission mass spectrum features both emission of large Phen clusters and entrainment of reaction products in the ejected flow, again in agreement with experimental observation. While H abstraction is a common fragmentation channel, the H radicals quickly combine with Phe in the amino group; no isolated H atom is ejected. read less NOT USED (high confidence) J. Baimova, B. Liu, S. Dmitriev, and K. Zhou, “Mechanical properties and structures of bulk nanomaterials based on carbon nanopolymorphs,” physica status solidi (RRL) – Rapid Research Letters. 2014. link Times cited: 31 Abstract: Bulk nanomaterials based on sp2 carbon nanopolymorphs are pr… read moreAbstract: Bulk nanomaterials based on sp2 carbon nanopolymorphs are promising candidates for supercapacitors due to their unique properties such as extremely high specific surface area, high conductivity and stability against graphitization. However, the mechanical response of such materials to external loading is not understood well. This Letter studies the effect of hydrostatic pressure on the mechanical properties and structures of these materials via molecular dynamics simulations. Three types of nanopolymorphs‐based nanomaterials that are composed of bended graphene flakes, short carbon nanotubes and fullerenes are considered. It is found that these three materials show a distinct relation between the pressure and volume strain. Moreover, their resistance to graphitization depends on the structure of their constituent components. The phenomena are explained by analysing the radial distribution function and coordination numbers of the atoms. (© 2014 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim) read less NOT USED (high confidence) Z. Zhang, X. Wang, and J. D. Lee, “An atomistic methodology of energy release rate for graphene at nanoscale,” Journal of Applied Physics. 2014. link Times cited: 30 Abstract: Graphene is a single layer of carbon atoms packed into a hon… read moreAbstract: Graphene is a single layer of carbon atoms packed into a honeycomb architecture, serving as a fundamental building block for electric devices. Understanding the fracture mechanism of graphene under various conditions is crucial for tailoring the electrical and mechanical properties of graphene-based devices at atomic scale. Although most of the fracture mechanics concepts, such as stress intensity factors, are not applicable in molecular dynamics simulation, energy release rate still remains to be a feasible and crucial physical quantity to characterize the fracture mechanical property of materials at nanoscale. This work introduces an atomistic simulation methodology, based on the energy release rate, as a tool to unveil the fracture mechanism of graphene at nanoscale. This methodology can be easily extended to any atomistic material system. We have investigated both opening mode and mixed mode at different temperatures. Simulation results show that the critical energy release rate of graphene is indepen... read less NOT USED (high confidence) S. D. Nath and S.-G. Kim, “Study of the Nanomechanics of CNTs under Tension by Molecular Dynamics Simulation Using Different Potentials,” International Scholarly Research Notices. 2014. link Times cited: 21 Abstract: At four different strain rates, the tensile stress strain re… read moreAbstract: At four different strain rates, the tensile stress strain relationship of single-walled 12-12 CNT with aspect ratio 9.1 obtained by Rebo potential (Brenner, 1990), Airebo potential (Stuart et al., 2000), and Tersoff potential (Tersoff, 1988) is compared with that of Belytschko et al. (2002) to validate the present model. Five different empirical potentials such as Rebo potential (Brenner, 1990), Rebo potential (Brenner et al., 2002), Inclusion LJ with Rebo potential (Brenner, 1990), Airebo potential (Stuart et al., 2000), and Tersoff potential (Tersoff, 1988) are used to simulate CNT subjected to axial tension differing its geometry at high strain rate. In Rebo potential (Mashreghi and Moshksar, 2010) only bond-order term is used and in Rebo potential (Brenner et al., 2002) torsional term is included with the bond-order term. At high strain rate the obtained stress strain relationships of CNTs subjected to axial tension differing its geometries using five different potentials are compared with the published results and from the comparison of the results, the drawback of the published results and limitations of different potentials are evaluated and the appropriate potential is selected which is the best among all other potentials to study the elastic, elastic-plastic properties of different types of CNTs. The present study will help a new direction to get reliable elastic, elastic-plastic properties of CNTs at different strain rates. Effects of long range Van der Waals interaction and torsion affect the elastic, elastic-plastic properties of CNTs and why these two effects are really needed to consider in bond-order Rebo potential (Brenner, 1990) to get reliable elastic, elastic-plastic properties of CNTs is also discussed. Effects of length-to-diameter ratio, layering of CNTs, and different empirical potentials on the elastic, elastic-plastic properties of CNTs are discussed in graphical and tabular forms with published results as a comparative manner to understand the nanomechanics of CNTs under tension using molecular dynamics simulation. read less NOT USED (high confidence) O. Glukhova, A. Kolesnikova, M. Slepchenkov, and V. Shunaev, “Theoretical investigation of bilayer fullerene C60@C540 in term of its biomedical application,” Biomedical optics. 2014. link Times cited: 0 Abstract: The results of theoretical study of bilayer fullerene C60@C5… read moreAbstract: The results of theoretical study of bilayer fullerene C60@C540 are presented in this paper. In order to identify regularities of internal fullerene movement in the field of the outer shell retaining potential multiwell potential of C60 and C540 fullerenes interaction was calculated. On the basis of the two-shell fullerene structure topology data and analysis of the fullerenes interaction energy surface relief possible options of C60 tunneling between potential wells are predicted. Compiled forecast is confirmed by the data of numerical experiment. read less NOT USED (high confidence) K. Nordlund and F. Djurabekova, “Multiscale modelling of irradiation in nanostructures,” Journal of Computational Electronics. 2014. link Times cited: 42 NOT USED (high confidence) K. E. Ryan et al., “Simulated adhesion between realistic hydrocarbon materials: effects of composition, roughness, and contact point.,” Langmuir : the ACS journal of surfaces and colloids. 2014. link Times cited: 34 Abstract: The work of adhesion is an interfacial materials property th… read moreAbstract: The work of adhesion is an interfacial materials property that is often extracted from atomic force microscope (AFM) measurements of the pull-off force for tips in contact with flat substrates. Such measurements rely on the use of continuum contact mechanics models, which ignore the atomic structure and contain other assumptions that can be challenging to justify from experiments alone. In this work, molecular dynamics is used to examine work of adhesion values obtained from simulations that mimic such AFM experiments and to examine variables that influence the calculated work of adhesion. Ultrastrong carbon-based materials, which are relevant to high-performance AFM and nano- and micromanufacturing applications, are considered. The three tips used in the simulations were composed of amorphous carbon terminated with hydrogen (a-C-H), and ultrananocrystalline diamond with and without hydrogen (UNCD-H and UNCD, respectively). The model substrate materials used were amorphous carbon with hydrogen termination (a-C-H) and without hydrogen (a-C); ultrananocrystalline diamond with (UNCD-H) and without hydrogen (UNCD); and the (111) face of single crystal diamond with (C(111)-H) and without a monolayer of hydrogen (C(111)). The a-C-H tip was found to have the lowest work of adhesion on all substrates examined, followed by the UNCD-H and then the UNCD tips. This trend is attributable to a combination of roughness on both the tip and sample, the degree of alignment of tip and substrate atoms, and the surface termination. Continuum estimates of the pull-off forces were approximately 2-5 times larger than the MD value for all but one tip-sample pair. read less NOT USED (high confidence) M. Dewapriya, M. Dewapriya, R. Rajapakse, and A. Phani, “Atomistic and continuum modelling of temperature-dependent fracture of graphene,” International Journal of Fracture. 2014. link Times cited: 108 NOT USED (high confidence) M. Hamdi and A. Ferreira, “Guidelines for the Design of Magnetic Nanorobots to Cross the Blood–Brain Barrier,” IEEE Transactions on Robotics. 2014. link Times cited: 19 Abstract: This study proposes molecular dynamics simulations used to d… read moreAbstract: This study proposes molecular dynamics simulations used to derive guidelines for the design of the superparamagnetic nanocapsules (spherical-like or rod-like) dedicated to cross the brain-blood barrier (BBB) by magnetic forces. We focus our study on capillaries that have opened fenestrations when the integrity of the endothelial barrier is perturbed by tumors. We identified three different categories of governing parameters: geometrical (radius and length of nanocapsules), biophysical (ligand-to-receptor surface density ratio, nonspecific interaction parameters) and biological (ligand/receptor binding affinity). The main novelty of our study is to carry out computational simulations to determine design criteria-the size, charge, and shape of various magnetic nanocapsules (spherical and rod-shaped nanocapsules)-that optimize their penetration into the BBB. Finally, the simulation results show that the superparamagnetic nanorobotic capsules were able to cross the endothelial barrier by using magnetic forces compatible with medical constraints. read less NOT USED (high confidence) D. Georgakaki, O. G. Ziogos, and H. Polatoglou, “Vibrational and mechanical properties of Si/Ge nanowires as resonators: A molecular dynamics study,” physica status solidi (a). 2014. link Times cited: 22 Abstract: In this work, we examine the vibrational and mechanical prop… read moreAbstract: In this work, we examine the vibrational and mechanical properties of clamped‐clamped rectangular SixGe1−x and Si/SixGe1−x nanowires (NWs) using molecular dynamics simulations. A virtual atomic force microscope nanotip is used to drive the vibration. The frequency response, the beat vibration phenomenon and the calculation of mechanical properties such as quality factor Q and Young's modulus E are thoroughly analyzed. The influence of added mass and hydrogen passivation on the NW resonator performance is also demonstrated. The decreasing frequency trend with increasing Ge concentration was different for binary alloys and alloy superlattices, while it remained unaffected by the superlattice period. The beat vibration phenomenon driven by a single excitation was observed at elevated temperatures for all studied configurations. The resonance frequency decreases linearly with increasing temperature whereas the Q‐factor follows a power law decrease. The Young's modulus E obtained through stress–strain computational experiments is found to be overestimated compared to the classical beam theory. Frequency decreases linearly as more atoms are added to the resonator. For low temperatures, the quality factor of composite Si/Ge resonators increased from 104 to 105 at T = 23 K, after performing hydrogen passivation on the NW free surfaces. read less NOT USED (high confidence) Y. Liu and X. Chen, “Mechanical properties of nanoporous graphene membrane,” Journal of Applied Physics. 2014. link Times cited: 89 Abstract: Nanoporous graphene holds great promise in the application o… read moreAbstract: Nanoporous graphene holds great promise in the application of filtration such as seawater desalination, gas separation, and ionic channels. In this paper, we study the mechanical properties of nanoporous graphene with different size, shape, and density of nanopore. The strength decreases as the size and porosity of the nanopore increases. However, the rough edges of the nanopore has significant influence to the strength where the blunt tip perpendicular to the loading direction has higher strength. The effective tensile modulus is only determined by porosity of the nanopore as ΔE ∼ -p0.64, while the strength is determined by the size, shape, and porosity of the nanopore, for the same type of nanopore the strength scales with the porosity as Δσs ∼ −p. In contrast, the effective fracture strain increases as porosity increases for small and moderate porosities. The work is a first study of the relation between mechanical properties and porosity of nanoporous graphene and is helpful to the design of high perf... read less NOT USED (high confidence) J. Polvi and K. Nordlund, “Low-energy irradiation effects in cellulose,” Journal of Applied Physics. 2014. link Times cited: 14 Abstract: Using molecular dynamics simulations, we determined the thre… read moreAbstract: Using molecular dynamics simulations, we determined the threshold energy for creating defects as a function of the incident angle for all carbon and oxygen atoms in the cellulose monomer. Our analysis shows that the damage threshold energy is strongly dependent on the initial recoil direction and on average slightly higher for oxygen atoms than for carbon atoms in cellulose chain. We also performed cumulative bombardment simulations mimicking low-energy electron irradiation (such as TEM imaging) on cellulose. Analyzing the results, we found that formation of free molecules and broken glucose rings were the most common forms of damage, whereas cross-linking and chain scission were less common. Pre-existing damage was found to increase the probability of cross-linking. read less NOT USED (high confidence) S. Meguid and F. A. Jahwari, “Modeling the pullout test of nanoreinforced metallic matrices using molecular dynamics,” Acta Mechanica. 2014. link Times cited: 17 NOT USED (high confidence) S. Meguid and F. A. Jahwari, “Modeling the pullout test of nanoreinforced metallic matrices using molecular dynamics,” Acta Mechanica. 2014. link Times cited: 0 NOT USED (high confidence) L. Xu, Y.-zhong Hu, T. Ma, and H. Wang, “Tunable giant anisotropic diffusion of water sub-monolayers between graphene layers,” Nanotechnology. 2013. link Times cited: 6 Abstract: We investigate the in-plane confinement effect of two graphe… read moreAbstract: We investigate the in-plane confinement effect of two graphene layers on the diffusion behaviour of water sub-monolayers using molecular dynamics simulations. An unexpected fast diffusion state with giant anisotropy is observed when the two confining graphene walls have certain shifts applied to their relative positions. The phenomenon is mainly attributed to the smooth one-dimensional potential channels produced by the composition effect of the potential energy landscapes of the two graphene walls, and the concerted motion of water molecules due to hydrogen bonding. Unique duality in the diffusion mechanism is observed in the fast diffusion state, as is ballistic motion along the potential channels and Fickian diffusion across such channels. The smooth potential channels can be created in certain directions simply by shifting the confining walls, which provides a novel measure to manipulate the motion of confined molecules in real-time. read less NOT USED (high confidence) V. R. Saranam and P. Greaney, “Surprising behaviour during dissipation and collision of flexural waves in carbon nanotubes,” Journal of Physics D: Applied Physics. 2013. link Times cited: 0 Abstract: The manuscript reports on simulations of the intrinsic dissi… read moreAbstract: The manuscript reports on simulations of the intrinsic dissipation of standing and travelling flexural vibrations in carbon nanotubes. It is found that extended travelling and standing waves exhibit anomalous dissipation, during which the excited modes experience massive damping that is triggered by the accumulation of energy in special gateway modes. In the second part of this work the attenuation of travelling flexural wave packets is examined—including the collisions between wave packets. Surprisingly, these wave packets show markedly different dissipation behaviour from extended waves with the same wavelength and amplitude. Moreover, the wave packet collisions are seen to be sensitive to the direction of collision, hinting at temperature gradient induced reduction of the thermal conductivity. Following the cascade of energy as it dissipates it is seen that scattering of energy into other flexural modes has little effect on the net energy flux, while dissipation into non-flexural modes is thermally resistive. read less NOT USED (high confidence) J. Wu, J. He, and Z. Zhang, “Fracture and negative Poisson’s ratio of novel spanned-fullerenes nanotube networks under tension,” Computational Materials Science. 2013. link Times cited: 18 NOT USED (high confidence) M. Li, Z. Kang, R. Li, X. Meng, and Y. Lu, “A molecular dynamics study on tensile strength and failure modes of carbon nanotube junctions,” Journal of Physics D: Applied Physics. 2013. link Times cited: 17 Abstract: Carbon nanotube (CNT) junctions have a wide range of potenti… read moreAbstract: Carbon nanotube (CNT) junctions have a wide range of potential applications in nanoelectronic devices, whose performance strongly relies on the stability of the junctions. The tensile strength and failure mode of zigzag junctions are investigated under different strain rates, temperatures, and geometrical dimensions. Firstly, both the modified transition state theory model and molecular dynamics (MD) simulations reveal that the yield strain of a junction depends linearly on the temperature and logarithmically on the strain rate. Moreover, MD simulations show that the yield strain is also affected by the curvature of the junction and the limit yield strain can be predicted by considering an unwrapped junction with the minimal curvature. Secondly, a junction may undergo a brittle or a ductile failure mode and the brittle–ductile transition (BDT) is dependent on the strain rate, temperature and geometrical dimension. The dominant geometrical factor affecting the failure modes is shown to be the aspect ratio rather than merely the diameter or length. Also, the BDT temperature, strain rate and aspect ratio is obtained. These findings may help to gain a deeper understanding of the tensile behaviour of CNT junctions and to provide a useful guidance for the design of CNT junction-based nanoelectronic devices. read less NOT USED (high confidence) Y. D. Fomin, “Molecular dynamics simulation of benzene in graphite and amorphous carbon slit pores,” Journal of Computational Chemistry. 2013. link Times cited: 7 Abstract: It is well known that confining a liquid into a pore strongl… read moreAbstract: It is well known that confining a liquid into a pore strongly alters the liquid behavior. Investigations of the effect of confinement are of great importance for many scientific and technological applications. Here, we present a study of the behavior of benzene confined in carbon slit pores. Two types of pores are considered–graphite and amorphous carbon ones. We show that the effect of different pore structure is of crucial importance for the benzene behavior. © 2013 Wiley Periodicals, Inc. read less NOT USED (high confidence) J. Wu, S. Nagao, J. He, and Z. Zhang, “Nanohinge-induced plasticity of helical carbon nanotubes.,” Small. 2013. link Times cited: 44 Abstract: Helical carbon nanotubes with intentionally incorporated non… read moreAbstract: Helical carbon nanotubes with intentionally incorporated non-hexagonal defects have unexpectedly high toughness and plasticity, in addition to the well-recognized extreme elasticity. The obtained toughness approaches 5000 J g(-1) with decreasing spring radius. The high toughness originates from the plastic nanohinge formation as a result of distributed partial fractures. A strong spring size effect, contradictory to the continuum solution, is precisely described by an atomistic bond-breaking model. read less NOT USED (high confidence) A. Galashev and V. Polukhin, “Computer simulation of thin nickel films on single-layer graphene,” Physics of the Solid State. 2013. link Times cited: 14 NOT USED (high confidence) Z. Bin et al., “Molecular Dynamics Simulation of Damage to Coiled Carbon Nanotubes under C Ion Irradiation,” Chinese Physics Letters. 2013. link Times cited: 1 Abstract: The stability of coiled carbon nanotubes under C ion irradia… read moreAbstract: The stability of coiled carbon nanotubes under C ion irradiation is investigated by molecular dynamics simulations. The defect statistics shows that small curvature coiled carbon nanotubes have better radiation tolerance than normal straight carbon nanotubes. To understand the effect of the curvature on defect production, the threshold displacement energies for the upper and lower walls, as well as those for the side parts, are calculated. The results show that the lower wall has better radiation tolerance than the upper wall. For the upper wall, a small increase in the curvature of nanotube axis gives rise to an increase in the radiation tolerance and then a decrease with the curvature becomes larger. However, for the lower wall, as the curvature of the nanotube axis increases, the radiation tolerance increases as the bonds compressed slightly in our simulation. read less NOT USED (high confidence) K. L. Joshi, S. Raman, and A. Duin, “Connectivity-Based Parallel Replica Dynamics for Chemically Reactive Systems: From Femtoseconds to Microseconds,” Journal of Physical Chemistry Letters. 2013. link Times cited: 57 Abstract: Reactive force field methods such as AIREBO, ReaxFF and COMB… read moreAbstract: Reactive force field methods such as AIREBO, ReaxFF and COMB, are extremely useful for studying physical and chemical interactions between molecules and materials. However, many chemical reactions have relatively high activation energies, putting them beyond the times-scale of conventional molecular dynamics (MD) at modest temperatures. To capture the low-temperature long-lived radical chemistry in atomistic simulations, we have developed a new transition detection scheme for performing Reactive Parallel Replica Dynamics (RPRD) simulation enabling an extended MD time-scales, essentially up to a microsecond using ReaxFF. In the newly implemented event detection scheme, the transition events are identified whenever there is a change in connectivity of any atom. 1-Heptene pyrolysis is chosen as a model system, and RPRD simulations are performed at temperatures as low as 1350K for up to 1 μs for a system consisting of 40 heptene molecules. The chemical mechanism and the product distribution that were obtained... read less NOT USED (high confidence) K. Henriksson, C. Björkas, and K. Nordlund, “Atomistic simulations of stainless steels: a many-body potential for the Fe–Cr–C system,” Journal of Physics: Condensed Matter. 2013. link Times cited: 65 Abstract: Stainless steels found in real-world applications usually ha… read moreAbstract: Stainless steels found in real-world applications usually have some C content in the base Fe–Cr alloy, resulting in hard and dislocation-pinning carbides—Fe3C (cementite) and Cr23C6—being present in the finished steel product. The higher complexity of the steel microstructure has implications, for example, for the elastic properties and the evolution of defects such as Frenkel pairs and dislocations. This makes it necessary to re-evaluate the effects of basic radiation phenomena and not simply to rely on results obtained from purely metallic Fe–Cr alloys. In this report, an analytical interatomic potential parameterization in the Abell–Brenner–Tersoff form for the entire Fe–Cr–C system is presented to enable such calculations. The potential reproduces, for example, the lattice parameter(s), formation energies and elastic properties of the principal Fe and Cr carbides (Fe3C, Fe5C2, Fe7C3, Cr3C2, Cr7C3, Cr23C6), the Fe–Cr mixing energy curve, formation energies of simple C point defects in Fe and Cr, and the martensite lattice anisotropy, with fair to excellent agreement with empirical results. Tests of the predictive power of the potential show, for example, that Fe–Cr nanowires and bulk samples become elastically stiffer with increasing Cr and C concentrations. High-concentration nanowires also fracture at shorter relative elongations than wires made of pure Fe. Also, tests with Fe3C inclusions show that these act as obstacles for edge dislocations moving through otherwise pure Fe. read less NOT USED (high confidence) W.-Q. Wu, Y. Yang, Q. Yuan, and D. Sun, “The collapse of an elastic tube induced by encapsulated liquid droplets,” Soft Matter. 2013. link Times cited: 1 Abstract: Using molecular dynamic simulations, we studied the equilibr… read moreAbstract: Using molecular dynamic simulations, we studied the equilibrium structure of an elastic nanotube filled with separated liquid droplets. When the filling of liquid droplets exceeded a certain critical ratio, the circular carbon nanotube was observed to be deformed into an elliptical one, associated with the coalescence of liquid droplets. We have proposed a theoretical model to explain such an abrupt structural deformation. Based on the competition between capillary and elastic energy, our theoretical model explained the collapse of the elastic tube very well and gave consistent predictions with the simulation results. The theoretical model was quite general and can be extended to other similar soft matter systems although it was originally deduced from the liquid-filled carbon nanotube systems. read less NOT USED (high confidence) X. Li and G. Zhang, “Enhancing the extremely high thermal conduction of graphene nanoribbons,” Frontiers in Physics. 2013. link Times cited: 5 Abstract: Graphene and Graphene nanoribbons (GNRs) are found to have s… read moreAbstract: Graphene and Graphene nanoribbons (GNRs) are found to have superior high thermal conductivity favorable for high-performance heat dissipation. In this letter, by using molecular dynamics simulations, we show that constructing specific structure can further enhance high thermal conduction of GNRs. By introducing a small gap at the center, the average heat flux (thermal conductivity) can be enhanced by up to 23%, the corresponding increase in total heat current is 16%. This unusual thermal conduction enhancement is achieved by an intriguing physical mechanism of suppress phonon-phonon scattering. Our findings uncover new mechanism to increase thermal conduction of GNRs. read less NOT USED (high confidence) J. Polvi and K. Nordlund, “Irradiation effects in high-density polyethylene,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2013. link Times cited: 13 NOT USED (high confidence) J. Wu, J. He, G. Odegard, S. Nagao, Q. Zheng, and Z. Zhang, “Giant stretchability and reversibility of tightly wound helical carbon nanotubes.,” Journal of the American Chemical Society. 2013. link Times cited: 61 Abstract: There is a surging interest in 3D graphitic nanostructures w… read moreAbstract: There is a surging interest in 3D graphitic nanostructures which possess outstanding properties enabling them to be prime candidates for a new generation of nanodevices and energy-absorbing materials. Here we study the stretching instability and reversibility of tightly wound helical carbon nanotubes (HCNTs) by atomistic simulations. The intercoil van der Waals (vdW) interaction-induced flattening of HCNT walls prior to loading is constrained by the defects coordinated for the curvature formation of helices. The HCNTs exhibit extensive stretchability in the range from 400% to 1000% as a result of two distinct deformation mechanisms depending on the HCNT size. For small HCNTs tremendous deformation is achieved by domino-type partial fracture events, whereas for large HCNTs this is accomplished by stepwise buckling of coils. The formation and fracture of edge-closed graphene ribbons occur at lower temperatures, while at elevated temperatures the highly distributed fracture realizes a phenomenal stretchability. The results of cyclic stretching-reversing simulations of large HCNTs display pronounced hysteresis loops, which produce large energy dissipation via full recovery of buckling and vdW bondings. This study provides physical insights into the origins of high ductility and superior reversibility of hybrid CNT structures. read less NOT USED (high confidence) F. Furuhashi and K. Shintani, “Morphology of a graphene nanoribbon encapsulated in a carbon nanotube,” AIP Advances. 2013. link Times cited: 14 Abstract: The morphologies of graphene nanoribbons (GNRs) encapsulated… read moreAbstract: The morphologies of graphene nanoribbons (GNRs) encapsulated in single-walled carbon nanotubes (SWNTs) are investigated using molecular-dynamics (MD) simulation. The GNRs are assumed to be hydrogen-terminated and formed by connecting polycyclic aromatic hydrocarbons, perylene or coronene molecules. The combined structures consisting of a GNR and an encapsulating SWNT are equilibrated at room temperature. It is shown that if the diameter of a SWNT is larger than the sum of the width of the GNR and twice the length of a C-H bond, a twisted GNR is obtained, whereas if the diameter of a SWNT is smaller than the sum of the two, the cross section of the SWNT cannot maintain its original circular shape and elliptically distorts, and a non-twisted GNR or a twisted GNR of long pitch is obtained. The estimated pitch of a regularly-twisted GNR agrees with the experimentally observed one in order of magnitude. read less NOT USED (high confidence) L. Hu and A. McGaughey, “Energy Accommodation between Noble Gases and Carbon Nanotubes,” Journal of Physical Chemistry C. 2013. link Times cited: 17 Abstract: Molecular dynamics simulations are used to predict the energ… read moreAbstract: Molecular dynamics simulations are used to predict the energy accommodation coefficients (EACs) between the noble gases He, Ne, and Ar and the outside of single-walled carbon nanotubes (CNTs) with diameters between 0.41 and 6.10 nm at a temperature of 300 K. The EAC increases monotonically with CNT diameter and approaches the value predicted for graphene. The EAC also increases monotonically with gas atom mass. The CNT EAC data collapse to a linear trend when they are normalized by the graphene EAC and plotted versus the depth of their potential energy well on the CNT normalized by that for graphene. The EACs are used to estimate that the thermal boundary conductance between noble gases and graphene will be of order 0.1 MW/m2·K at a gas pressure of 1 atm, corresponding to a gas Kapitza length of order 100 nm. read less NOT USED (high confidence) N. Pugno, Q. Yin, X. Shi, and R. Capozza, “A generalization of the Coulomb’s friction law: from graphene to macroscale,” Meccanica. 2013. link Times cited: 30 NOT USED (high confidence) A. Marconnet, M. Panzer, and K. Goodson, “Thermal conduction phenomena in carbon nanotubes and related nanostructured materials,” Reviews of Modern Physics. 2013. link Times cited: 350 Abstract: The extremely high thermal conductivities of carbon nanotube… read moreAbstract: The extremely high thermal conductivities of carbon nanotubes have motivated a wealth of research. Progress includes innovative conduction metrology based on microfabricated platforms and scanning thermal probes as well as simulations exploring phonon dispersion and scattering using both transport theory and molecular dynamics. This article highlights these advancements as part of a detailed review of heat conduction research on both individual carbon nanotubes and nanostructured films consisting of arrays of nanotubes or disordered nanotube mats. Nanotube length, diameter, and chirality strongly influence the thermal conductivities of individual nanotubes and the transition from primarily diffusive to ballistic heat transport with decreasing temperature. A key experimental challenge, for both individual nanotubes and aligned films, is the separation of intrinsic and contact resistances. Molecular dynamics simulations have studied the impacts of specific types of imperfections on the nanotube conductance and its variation with length and chirality. While the properties of aligned films fall short of predictions based on individual nanotube data, improvements in surface engagement and postfabrication nanotube quality are promising for a variety of applications including mechanically compliant thermal contacts. read less NOT USED (high confidence) W. Li, L. Liang, S. Zhao, S. Zhang, and J. Xue, “Fabrication of nanopores in a graphene sheet with heavy ions: A molecular dynamics study,” Journal of Applied Physics. 2013. link Times cited: 60 Abstract: Molecular dynamics simulations were performed to study the f… read moreAbstract: Molecular dynamics simulations were performed to study the formation process of nanopores in a suspended graphene sheet irradiated by using energetic ions though a mask. By controlling the ion parameters including mass, energy, and incident angle, different kinds of topography were observed in the graphene sheet. Net-like defective structures with carbon atom chains can be formed at low ion fluences, which provide the possibility to functionalize the irradiated sample with subsequent chemical methods; finally a perfect nanopore with smooth edge appears when the ion fluence is high enough. We found that the dependence of ion damage efficiency on ion fluence, energy, and incident angle are different from that predicted by the semi-empirical model based on the binary-collision approximation, which results from the special structure of graphene. Our results demonstrate that it is feasible to fabricate controlled nanopores/nanostructures in graphene via heavy ion irradiation. read less NOT USED (high confidence) M. Dewapriya, A. Phani, and R. Rajapakse, “Influence of temperature and free edges on the mechanical properties of graphene,” Modelling and Simulation in Materials Science and Engineering. 2013. link Times cited: 88 Abstract: A systematic molecular dynamics simulation study is performe… read moreAbstract: A systematic molecular dynamics simulation study is performed to assess the effects of temperature and free edges on the ultimate tensile strength and Young's modulus of a single-layer graphene sheet. It is observed that graphene sheets at higher temperatures fail at lower strains, due to the high kinetic energy of atoms. A numerical model, based on kinetic analysis, is used to predict the ultimate strength of the graphene under various temperatures and strain rates. As the width of a graphene reduces, the excess edge energy associated with free edge atoms induces an initial strain on the relaxed configuration of the sheets. This initial strain has a greater influence on the Young's modulus of the zigzag sheet compared with that of the armchair sheets. The simulations reveal that the carbon–carbon bond length and amplitude of intrinsic ripples of the graphene increases with temperature. The initial out-of-plane displacement of carbon atoms is necessary to simulate the physical behaviour of a graphene when the Nosé–Hoover or Berendsen thermostat is used. read less NOT USED (high confidence) K. Solvik, J. Weaver, A. M. Brockway, and J. Schrier, “Entropy-driven Molecular Separations in 2D-Nanoporous Materials, with Application to High-performance Paraffin/Olefin Membrane Separations,” Journal of Physical Chemistry C. 2013. link Times cited: 18 Abstract: Nanometer-scale pores in carbon-based materials such as grap… read moreAbstract: Nanometer-scale pores in carbon-based materials such as graphene, carbon nanotubes, and two-dimensional polymers have emerged as a promising approach to high permeance, high selectivity gas separation membranes. In previous studies, quantum-mechanical mass-dependent tunneling, classical size-exclusion and differences in surface adsorption have been used to obtain high selectivity. Here, we illustrate a new classical approach in which an entropic barrier causes the selective separation of gas molecules. Using atomistic molecular dynamics simulations, we study the separation of ethane, ethene, propane, propene, n-butane, isobutane, 1-butene, cis-2-butene, trans-2-butene, isobutene, and 1,3-butadiene through a novel nanoporous two-dimensional hydrocarbon polymer (denoted PG-TP1), as a function of temperature and pressure. Despite the absence of a potential energy barrier for both types of species and the greater surface adsorption of the paraffins, selective passage of olefins results from the greater number... read less NOT USED (high confidence) A. Wilmes and S. Pinho, “A New Multi-Physics Molecular Dynamics Finite Element Method for designing graphene based nano-structures,” 2013 13th IEEE International Conference on Nanotechnology (IEEE-NANO 2013). 2013. link Times cited: 0 Abstract: A new Multi-Physics Molecular Dynamics Finite Element Method… read moreAbstract: A new Multi-Physics Molecular Dynamics Finite Element Method (MDFEM) is proposed, which exactly embeds the equilibrium equations of Molecular Dynamics (MD) within the computationally more favourable Finite Element Method (FEM). This MDFEM can readily implement any force field because constitutive relations are explicitly uncoupled from the geometrical element topologies. Different force fields, including bond-order reactive and fluctuating charge-dipole potentials, are implemented exactly in a commercial FE code, with both explicit and implicit dynamic formulations. The latter allows for larger length and time scales as well as eigenvalue analyses. The MDFEM is shown to be equivalent to MD, but at a considerably reduced computational cost. Results and applications include conformational and parametric topology studies of Pillared Graphene Structures, the analyses of brittle fracture in defective Carbon Nanotubes, electric field induced vibrations and electron-emissions in CNT, electric charge distribution in graphene, and the concurrent multi-scale simulation with continuum mechanics and MD domains. read less NOT USED (high confidence) J. Petucci, C. LeBlond, M. Karimi, and G. Vidali, “Diffusion, adsorption, and desorption of molecular hydrogen on graphene and in graphite.,” The Journal of chemical physics. 2013. link Times cited: 45 Abstract: The diffusion of molecular hydrogen (H2) on a layer of graph… read moreAbstract: The diffusion of molecular hydrogen (H2) on a layer of graphene and in the interlayer space between the layers of graphite is studied using molecular dynamics computer simulations. The interatomic interactions were modeled by an Adaptive Intermolecular Reactive Empirical Bond Order (AIREBO) potential. Molecular statics calculations of H2 on graphene indicate binding energies ranging from 41 meV to 54 meV and migration barriers ranging from 3 meV to 12 meV. The potential energy surface of an H2 molecule on graphene, with the full relaxations of molecular hydrogen and carbon atoms is calculated. Barriers for the formation of H2 through the Langmuir-Hinshelwood mechanism are calculated. Molecular dynamics calculations of mean square displacements and average surface lifetimes of H2 on graphene at various temperatures indicate a diffusion barrier of 9.8 meV and a desorption barrier of 28.7 meV. Similar calculations for the diffusion of H2 in the interlayer space between the graphite sheets indicate high and low temperature regimes for the diffusion with barriers of 51.2 meV and 11.5 meV. Our results are compared with those of first principles. read less NOT USED (high confidence) V. Y. Bohn, M. Piccolo, and G. Perillo, “Características bio-ópticas y morfometría de una laguna de zona templada.” 2013. link Times cited: 2 Abstract: The aim of this study was to evaluate the correlation betwee… read moreAbstract: The aim of this study was to evaluate the correlation between field sensors and sate - llite images in the bio-optical characterization of Lake Chasico (Argentina) during the February-April 2010 period. The morphometric parameters of the body of water were obtained from in situ measurements and satellite data processing. The sensors that were used allowed spectral signatures to be acquired and then surface water characteristics were detected: turbidity, chlorophyll-a and depth variations. Results obtained from the morphometric analysis included that the lake surpassed the 50 km 2 extension and showed a sub-rectangular elongated shape. The chlorophyll-a spatial distribution in the lake was modeled from the satellite image processing, in situ chlorophyll-a data and the Normalized Difference Vegetation Index (NDVI) calculation. 53.2 % of its area showed a chlorophyll-a range between 5 and 10 g/l. Therefore, the body of water was characterized as a mesotrophic lake, during the studied period. read less NOT USED (high confidence) N. Pineau, “Molecular Dynamics Simulations of Shock Compressed Graphite,” Journal of Physical Chemistry C. 2013. link Times cited: 27 Abstract: We present molecular dynamic simulations of the shock compre… read moreAbstract: We present molecular dynamic simulations of the shock compression of graphite with the LCBOPII potential. The range of shock intensities covers the full range of available experimental data, including near-terapascal pressures. The results are in excellent agreement with the available DFT data and point to a graphite-diamond transition for shock pressures above 65 GPa, a value larger than the experimental data (20 to 50 GPa). The transition mechanism leads preferentially to hexagonal diamond through a diffusionless process but is submitted to irreversible regraphitization upon release: this result is in good agreement with the lack of highly ordered diamond observed in post-mortem experimental samples. Melting is found for shock pressures ranging from 200 to 300 GPa, close to the approximate LCBOPII diamond melting line. A good overall agreement is found between the calculated and experimental Hugoniot data up to 46% compression rate. read less NOT USED (high confidence) E. Iype, M. Hütter, A. Jansen, S. S. Nedea, and C. Rindt, “Parameterization of a reactive force field using a Monte Carlo algorithm,” Journal of Computational Chemistry. 2013. link Times cited: 79 Abstract: Parameterization of a molecular dynamics force field is esse… read moreAbstract: Parameterization of a molecular dynamics force field is essential in realistically modeling the physicochemical processes involved in a molecular system. This step is often challenging when the equations involved in describing the force field are complicated as well as when the parameters are mostly empirical. ReaxFF is one such reactive force field which uses hundreds of parameters to describe the interactions between atoms. The optimization of the parameters in ReaxFF is done such that the properties predicted by ReaxFF matches with a set of quantum chemical or experimental data. Usually, the optimization of the parameters is done by an inefficient single‐parameter parabolic‐search algorithm. In this study, we use a robust metropolis Monte‐Carlo algorithm with simulated annealing to search for the optimum parameters for the ReaxFF force field in a high‐dimensional parameter space. The optimization is done against a set of quantum chemical data for MgSO4 hydrates. The optimized force field reproduced the chemical structures, the equations of state, and the water binding curves of MgSO4 hydrates. The transferability test of the ReaxFF force field shows the extend of transferability for a particular molecular system. This study points out that the ReaxFF force field is not indefinitely transferable. © 2013 Wiley Periodicals, Inc. read less NOT USED (high confidence) A. A. Selezenev, A. Aleinikov, N. S. Ganchuk, S. Ganchuk, R. Jones, and J. Zimmerman, “Molecular dynamics calculation of the thermal conductivity coefficient of single-layer and multilayer graphene sheets,” Physics of the Solid State. 2013. link Times cited: 5 NOT USED (high confidence) Y. Zhang and Y. T. Gu, “Mechanical properties of graphene : effects of layer number, temperature and isotope,” Science & Engineering Faculty. 2013. link Times cited: 143 NOT USED (high confidence) T. L. Borders, A. F. Fonseca, H. Zhang, K. Cho, and A. Rusinko, “Developing Descriptors To Predict Mechanical Properties of Nanotubes,” Journal of chemical information and modeling. 2013. link Times cited: 10 Abstract: Descriptors and quantitative structure property relationship… read moreAbstract: Descriptors and quantitative structure property relationships (QSPR) were investigated for mechanical property prediction of carbon nanotubes (CNTs). 78 molecular dynamics (MD) simulations were carried out, and 20 descriptors were calculated to build quantitative structure property relationships (QSPRs) for Young's modulus and Poisson's ratio in two separate analyses: vacancy only and vacancy plus methyl functionalization. In the first analysis, C(N2)/C(T) (number of non-sp2 hybridized carbons per the total carbons) and chiral angle were identified as critical descriptors for both Young's modulus and Poisson's ratio. Further analysis and literature findings indicate the effect of chiral angle is negligible at larger CNT radii for both properties. Raman spectroscopy can be used to measure C(N2)/C(T), providing a direct link between experimental and computational results. Poisson's ratio approaches two different limiting values as CNT radii increases: 0.23-0.25 for chiral and armchair CNTs and 0.10 for zigzag CNTs (surface defects <3%). In the second analysis, the critical descriptors were C(N2)/C(T), chiral angle, and M(N)/C(T) (number of methyl groups per total carbons). These results imply new types of defects can be represented as a new descriptor in QSPR models. Finally, results are qualified and quantified against experimental data. read less NOT USED (high confidence) H. Wang, J. Gong, Y. Pei, and Z. Xu, “Thermal transfer in graphene-interfaced materials: contact resistance and interface engineering.,” ACS applied materials & interfaces. 2013. link Times cited: 41 Abstract: We investigate here heat transfer across interfaces consisti… read moreAbstract: We investigate here heat transfer across interfaces consisting of single- and few-layer graphene sheets between silicon carbides by performing nonequilibrium molecular dynamics simulations. The interfacial thermal conducitivity κI is calculated by considering graphene layers as an interfacial phase. The results indicate that κI decreases with its thickness and heat flux but increases with the environmental temperature. Interface engineering of κI is explored by intercalating molecules between graphene layers. These guest molecules decouple electronic states across the interface, but tune κI slightly, leading to a thermally transparent but electronically insulating interface. These results provide a fundamental understanding in thermal transport across weakly bound interfaces, and design recipes for multifunctional thermal interface materials, composites and thermal management in graphene-based devices. read less NOT USED (high confidence) A. Wagner, L. Rivera-Rivera, D. Bachellerie, J. Perry, and D. Thompson, “A classical trajectory study of the dissociation and isomerization of C2H5.,” The journal of physical chemistry. A. 2013. link Times cited: 7 Abstract: Motivated by photodissociation experiments in which non-RRKM… read moreAbstract: Motivated by photodissociation experiments in which non-RRKM nanosecond lifetimes of the ethyl radical were reported, we have performed a classical trajectory study of the dissociation and isomerization of C2H5 over the energy range 100-150 kcal/mol. We used a customized version of the AIREBO semiempirical potential (Stuart, S. J.; et al. J. Chem. Phys. 2000, 112, 6472-6486) to more accurately describe the gas-phase decomposition of C2H5. This study constitutes one of the first gas-phase applications of this potential form. At each energy, 10,000 trajectories were run and all underwent dissociation in less than 100 ps. The calculated dissociation rate constants are consistent with RRKM models; no evidence was found for nanosecond lifetimes. An analytic kinetics model of isomerization/dissociation competition was developed that incorporated incomplete mode mixing through a postulated divided phase space. The fits of the model to the trajectory data are good and represent the trajectory results in detail through repeated isomerizations at all energies. The model correctly displays single exponential decay at lower energies, but at higher energies, multiexponential decay due to incomplete mode mixing becomes more apparent. At both ends of the energy range, we carried out similar trajectory studies on CD2CH3 to examine isotopic scrambling. The results largely support the assumption that a H or a D atom is equally likely to dissociate from the mixed-isotope methyl end of the molecule. The calculated fraction of products that have the D atom dissociation is ∼20%, twice the experimental value available at one energy within our range. The calculated degree of isotopic scrambling is non-monotonic with respect to energy due to a non-monotonic ratio of the isomerization to dissociation rate constants. read less NOT USED (high confidence) Y. Dong, Q. Li, and A. Martini, “Molecular dynamics simulation of atomic friction: A review and guide,” Journal of Vacuum Science and Technology. 2013. link Times cited: 158 Abstract: This paper reviews recent progress in molecular dynamics sim… read moreAbstract: This paper reviews recent progress in molecular dynamics simulation of atomic-scale friction measured by an atomic force microscopy. Each section of the review focuses on an individual condition or parameter that affects atomic friction including materials, surfaces, compliance, contact area, normal load, temperature, and velocity. The role each parameter plays is described in the context of both experimental measurements and simulation predictions. In addition, the discussion includes an overview of the research community's current understanding of observed effects, guidelines for implementation of those effects in an atomistic simulation, and suggestions for future research to address open questions. Taken together, this review conveys the message that friction at the atomic scale is affected by many interrelated parameters and that the use of molecular dynamics simulation as a predictive tool can be accomplished only through careful model design. read less NOT USED (high confidence) P. Yang, X. Li, H. Yang, X. Wang, Y. Tang, and X. Yuan, “Numerical investigation on thermal conductivity and thermal rectification in graphene through nitrogen-doping engineering,” Applied Physics A. 2013. link Times cited: 28 NOT USED (high confidence) S. M. M. Ehteshami and S. Chan, “Molecular Simulations in Activated Carbons for Carbon Monoxide Removal From Wet Mixture of Hydrogen and Carbon Monoxide,” Separation Science and Technology. 2013. link Times cited: 2 Abstract: Activated carbons are porous materials with a high surface a… read moreAbstract: Activated carbons are porous materials with a high surface area which are widely used in gases separation and catalysis. This work focuses on the understanding of the separation characteristics of activated carbons for purifying hydrogen from the wet mixture of hydrogen and carbon monoxide (in hundreds of ppm). This study would build a basic insight of the separation mechanism of the activated carbon and determine whether activated carbons are suitable for CO removal from the mixture. Systematic Grand Canonical Monte Carlo (GCMC) simulations have been carried out to assess the adsorption properties and selectivity of the activated carbon to the gaseous mixture with different gas phase compositions, temperatures, and pressures. The calculated adsorption isotherms, both for single and multi-component gas mixture, and isosteric heats of adsorption on the activated carbon showed reasonably good agreement with the experimental data available in the literature. read less NOT USED (high confidence) T. Panczyk and W. Rudziński, “Effects of surface heterogeneity of carbon nanotubes in adsorption of colloid nanoparticles studied by means of computer simulations,” Adsorption. 2013. link Times cited: 1 NOT USED (high confidence) M. Hamdi, A. Subramanian, L. Dong, A. Ferreira, and B. Nelson, “Simulation of Rotary Motion Generated by Head-to-Head Carbon Nanotube Shuttles,” IEEE/ASME Transactions on Mechatronics. 2013. link Times cited: 23 Abstract: A novel rotary nanomotor is described using two axially alig… read moreAbstract: A novel rotary nanomotor is described using two axially aligned, opposing chirality nanotube shuttles. Based on intershell screw-like motion of nanotubes, rotary motion is generated by electrostatically pulling the two cores together. Simulations using molecular dynamics show the generation of rotation from armchair nanotube pairs and their actuation properties. The simulation results point toward the use of these motors as building blocks in nanoelectromechanical systems and nanorobotic systems for sensing, actuation, and computation applications. read less NOT USED (high confidence) E. H. Cook, M. Buehler, and Z. Spakovszky, “Mechanism of friction in rotating carbon nanotube bearings,” Journal of The Mechanics and Physics of Solids. 2013. link Times cited: 87 NOT USED (high confidence) G. Slotman and A. Fasolino, “Structure, stability and defects of single layer hexagonal BN in comparison to graphene,” Journal of Physics: Condensed Matter. 2013. link Times cited: 58 Abstract: We study by molecular dynamics the structural properties of … read moreAbstract: We study by molecular dynamics the structural properties of single layer hexagonal boron nitride (h-BN) in comparison to graphene. We show that the Tersoff bond order potential developed for BN by Albe et al (1997 Radiat. Eff. Defects Solids 141 85–97) gives a thermally stable hexagonal single layer with a bending constant κ = 0.54 eV at T = 0. We find that the non-monotonic behaviour of the lattice parameter, the expansion of the interatomic distance and the growth of the bending rigidity with temperature are qualitatively similar to those of graphene. Conversely, the energetics of point defects is extremely different: instead of Stone–Wales defects, the two lowest energy defects in h-BN involve either a broken bond or an out-of-plane displacement of a N atom to form a tetrahedron with three B atoms in the plane. We provide the formation energies and an estimate of the energy barriers. read less NOT USED (high confidence) L. Abbott, K. E. Hart, and C. Colina, “Polymatic: a generalized simulated polymerization algorithm for amorphous polymers,” Theoretical Chemistry Accounts. 2013. link Times cited: 198 NOT USED (high confidence) P. Kennedy, Z. Postawa, and B. Garrison, “Dynamics displayed by energetic C60 bombardment of metal overlayers on an organic substrate.,” Analytical chemistry. 2013. link Times cited: 3 Abstract: Cluster bombardments of 15 keV C(60) on metal-organic interf… read moreAbstract: Cluster bombardments of 15 keV C(60) on metal-organic interfaces composed of silver atoms and octatetraene molecules were modeled using molecular dynamics computer simulations. Dynamics revealed by the simulations include the formation of holes in the metal overlayers from which underlying organic molecules are sputtered predominantly by a rapid jetlike motion and the implantation of metal atoms and clusters in the underlying organic solid. Both of these processes negatively affect the information depth for cluster bombardment of metal-organic interfaces; therefore, the simulations presented here give a clear picture of the issues associated with depth profiling through metal-organic interfaces. read less NOT USED (high confidence) T. Luo and G. Chen, “Nanoscale heat transfer–from computation to experiment.,” Physical chemistry chemical physics : PCCP. 2013. link Times cited: 200 Abstract: Heat transfer can differ distinctly at the nanoscale from th… read moreAbstract: Heat transfer can differ distinctly at the nanoscale from that at the macroscale. Recent advancement in computational and experimental techniques has enabled a large number of interesting observations and understanding of heat transfer processes at the nanoscale. In this review, we will first discuss recent advances in computational and experimental methods used in nanoscale thermal transport studies, followed by reviews of novel thermal transport phenomena at the nanoscale observed in both computational and experimental studies, and discussion on current understanding of these novel phenomena. Our perspectives on challenges and opportunities on computational and experimental methods are also presented. read less NOT USED (high confidence) J. Schall and J. Harrison, “Reactive Bond-Order Potential for Si-, C-, and H-Containing Materials,” Journal of Physical Chemistry C. 2013. link Times cited: 8 Abstract: A new bond-order potential for modeling systems containing s… read moreAbstract: A new bond-order potential for modeling systems containing silicon, carbon, and hydrogen, such as organosilicon molecules (CxSiyHz), solid silicon, solid carbon, and alloys of silicon and carbon, is presented. This reactive potential utilizes the formalism of the second-generation reactive empirical bond-order potential (REBO) [Brenner et al. J. Phys.: Condens. Matter 2002, 14, 783] for hydrocarbons and the REBO parameters for silicon [Schall, Gao, Harrison. Phys. Rev. B 2008, 77, 115209]. Modifications to the hydrocarbon REBO potential were made to improve the description of three-atom type systems. The widespread use of Brenner’s REBO potential, its ability to model a wide range of hydrocarbon materials, and the existence of parameters for several atom types are some of the motivating factors for obtaining this Si–C–H (2B-SiCH) parametrization. The usefulness and flexibility of this potential is demonstrated by examining the properties of organosilicon molecules, the bulk, surface, and defect properties... read less NOT USED (high confidence) X. Meng, M. Li, Z. Kang, X. Zhang, and J. Xiao, “Mechanics of self-folding of single-layer graphene,” Journal of Physics D: Applied Physics. 2013. link Times cited: 73 Abstract: The extreme out-of-plane flexibility makes single-layer grap… read moreAbstract: The extreme out-of-plane flexibility makes single-layer graphene vulnerable to self-folding, driven by van der Waals interactions. Racket shaped bilayer graphene edges form after self-folding, which can significantly affect the electrical properties of graphenes. To study the self-folding behaviour, a theoretical model based on finite deformation beam theory is established. The critical folding lengths for both metastable and stable self-folding, as well as the edge profile of a folded single-layer graphene, are given. They all agree very well with MD simulations. MD simulations also show that folding directions do not have strong influence on the shape of folded graphene edges. read less NOT USED (high confidence) Z. Zhang, W. Duan, and C. Wang, “A grillage model for predicting wrinkles in annular graphene under circular shearing,” Journal of Applied Physics. 2013. link Times cited: 14 Abstract: This paper is concerned with a Timoshenko grillage model for… read moreAbstract: This paper is concerned with a Timoshenko grillage model for modeling the wrinkling phenomenon in annular graphene under circular shearing applied at its inner edge. By calibrating the grillage model results against the molecular mechanics (MM) results, the grillage model comprising beams of elliptical cross-section orientated along the carbon-carbon bond has section dimensions of 0.06 nm for the major axis length and 0.036 nm for the minor axis length. Moreover, the beams are connected to one another at 0.00212 nm from the geometric centric. This eccentric connection of beams allows the proposed grillage model to cater for the cross-couplings among bonds that produce the out-of-plane wrinkling pattern. The out-of-plane to in-plane bending stiffnesses' ratio is 0.36, and the cross bending stiffness provided by the ellipse eccentricity is 0.025 times that of the in-plane bending stiffness. Besides furnishing identical wave numbers as well as amplitudes and wavelengths that are in good agreement with MM results, the grillage model can capture wrinkling patterns with a boundary layer, whereas plate and membrane models could not mimic the boundary layer. read less NOT USED (high confidence) M. Hamdi and A. Ferreira, “Computational study of superparamagnetic nanocapsules crossing the blood-brain barrier: A robotics approach,” 2012 IEEE/RSJ International Conference on Intelligent Robots and Systems. 2012. link Times cited: 8 Abstract: This work proposes molecular dynamics simulations used to de… read moreAbstract: This work proposes molecular dynamics simulations used to derive guidelines for the design of the superparamagnetic nanocapsules (spherical-like or tubular-like) dedicated to cross the brain-blood barrier by magnetic forces. We focus our study on capillaries that have opened fenestrations when the integrity of the endothelial barrier is perturbed by tumors. We identified three different categories of governing parameters: geometrical (radius and length of nanocapsules); biophysical (ligand-to-receptor surface density ratio; non-specific interaction parameter) and biological (ligandreceptor binding affinity). It was demonstrated from MD simulations that the optimized size was for CNTs with dimensions greater than for 20 to 200 nm. Finally, the simulation results show that the superparamagnetic nanorobotic capsules were able to cross the endothelial barrier by using magnetic forces compatible with medical constraints. read less NOT USED (high confidence) Y. Shin, H. Kwak, C. Zou, A. Vasenkov, and A. V. van Duin, “Development and validation of a ReaxFF reactive force field for Fe/Al/Ni alloys: molecular dynamics study of elastic constants, diffusion, and segregation.,” The journal of physical chemistry. A. 2012. link Times cited: 59 Abstract: We have developed a ReaxFF force field for Fe/Al/Ni binary a… read moreAbstract: We have developed a ReaxFF force field for Fe/Al/Ni binary alloys based on quantum mechanical (QM) calculations. In addition to the various bulk phases of the binary alloys, the (100), (110) and (111) surface energies and adatom binding energies were included in the training set for the force field parametrization of the Fe/Al/Ni binary alloys. To validate these optimized force fields, we studied (i) elastic constants of the binary alloys at finite temperatures, (ii) diffusivity of alloy components in Al/Ni alloy, and (iii) segregation on the binary alloy surfaces. First, we calculated linear elastic constants of FeAl, FeNi(3), and Ni(3)Al in the temperature range 300 to 1100 K. The temperature dependences of the elastic constants of these three alloys, showing a decrease in C(11), C(12), and C(44) as temperature increases, were in good agreement with the experimental results. We also performed ReaxFF molecular dynamics (MD) simulations for Al or Ni diffusion in the system modeled as Al/Ni mixed layers with the linear composition gradients. At 1000 K, Al diffusivity at the pure Al end was 2 orders of magnitude larger than that in the Al trace layers, probably explaining the nature of different diffusion behavior between molten metals and alloys. However, the diffusivity of Ni at the pure Ni end was only slightly larger than that in the Ni trace layers at the system temperature much lower than the melting temperature of Ni. Third, we investigated the surface segregation in L1(2)-Fe(3)Al, Fe(3)Ni, and Ni(3)Al clusters at high temperature (2500 K). From the analysis of composition distribution of the alloy components from the bulk to the surface layer, it was found that the degree of segregation depended on the chemical composition of the alloy. Al surface segregation occurred most strongly in Fe(3)Al, whereas it occurred most weakly in Ni(3)Al. These results may support the segregation mechanism that surface segregation results from the interplay between the energetic stability of the ordered bulk phase and the surface reconstruction. In addition, the surface segregation induced the depletion layers of segregating metal species (Al in Fe(3)Al and Ni(3)Al, and Ni in Fe(3)Ni) next to the segregation layers. These simulation results qualitatively agreed with early experimental observations of segregation in Fe/Al/Ni binary alloys. read less NOT USED (high confidence) T. Chantawansri, T. Sirk, E. Byrd, J. Andzelm, and B. Rice, “Shock Hugoniot calculations of polymers using quantum mechanics and molecular dynamics.,” The Journal of chemical physics. 2012. link Times cited: 36 Abstract: Using quantum mechanics (QM) and classical force-field based… read moreAbstract: Using quantum mechanics (QM) and classical force-field based molecular dynamics (FF), we have calculated the principle shock Hugoniot curves for numerous amorphous polymers including poly[methyl methacrylate] (PMMA), poly[styrene], polycarbonate, as well as both the amorphous and crystalline forms of poly[ethylene]. In the FF calculations, we considered a non-reactive force field (i.e., polymer consistent FF). The QM calculations were performed with density functional theory (DFT) using dispersion corrected atom centered pseudopotentials. Overall, results obtained by DFT show much better agreement with available experimental data than classical force fields. In particular, DFT calculated Hugoniot curves for PMMA up to 74 GPa are in very good agreement with experimental data, where a preliminary study of chain fracture and association was also performed. Structure analysis calculations of the radius of gyration and carbon-carbon radial distribution function were also carried out to elucidate contraction of the polymer chains with increasing pressure. read less NOT USED (high confidence) S. W. Cranford, D. B. Brommer, and M. Buehler, “Extended graphynes: simple scaling laws for stiffness, strength and fracture.,” Nanoscale. 2012. link Times cited: 152 Abstract: The mono-atomistic structure and chemical stability of graph… read moreAbstract: The mono-atomistic structure and chemical stability of graphene provides a promising platform to design a host of novel graphene-like materials. Using full atomistic first-principles based ReaxFF molecular dynamics, here we perform a systematic comparative study of the stability, structural and mechanical properties of graphynes - a variation of the sp(2) carbon motif wherein the characteristic hexagons of graphene are linked by sp(1) acetylene (single- and triple-bond) carbyne-like chains. The introduction of acetylene links introduces an effective penalty in terms of stability, elastic modulus (i.e., stiffness), and failure strength, which can be predicted as a function of acetylene repeats, or, equivalently, lattice spacing. We quantify the mechanical properties of experimental accessible graphdiyne, with a modulus on the order of 470 to 580 GPa and a ultimate strength on the order of 36 GPa to 46 GPa (direction dependent). We derive general scaling laws for the cumulative effects of additional acetylene repeats, formulated through a simple discrete spring-network framework, allowing extrapolation of mechanical performance to highly extended graphyne structures. Onset of local tensile buckling results in a transitional regime characterized by a severe reduction of strength (ultimate stress), providing a new basis for scaling extended structures. Simple fracture simulations support the scaling functions, while uncovering a "two-tier" failure mode for extended graphynes, wherein structural realignment facilitates stress transfer beyond initial failure. Finally, the specific modulus and strength (normalized by areal density) is found to be near-constant, suggesting applications for light-weight, yet structurally robust molecular components. read less NOT USED (high confidence) M. A. Reyes-Martinez, A. Ramasubramaniam, A. Briseno, and A. Crosby, “The Intrinsic Mechanical Properties of Rubrene Single Crystals,” Advanced Materials. 2012. link Times cited: 56 Abstract: The study of the electrical properties of rubrene single cry… read moreAbstract: The study of the electrical properties of rubrene single crystals ( Figure 1 ) has provided a better understanding of the charge transport mechanisms in organic semiconductors while opening the doors to a new generation of high-performance electronic devices. [ 1–4 ] Despite the high charge carrier mobilities of rubrene crystals, their fragile nature and associated handling diffi culty have limited their use to fundamental charge transport studies, where throughput and bendability are not a requirement. Recent advances in the patterning techniques of organic single crystals over large-areas, [ 5 , 6 ] bring new promise for the utilization of these materials beyond charge transport studies, especially in the fi eld of fl exible electronics. [ 7 ] However, in order to effectively take advantage of the electrical properties of rubrene single-crystals in fl exible devices, their fundamental mechanical properties need to be understood and characterized. Here we present an experimental and computational investigation of the mechanical properties of rubrene single-crystals. The in-plane elastic constants are obtained by inducing the wrinkling instability in crystals laminated on elastomeric substrates. Our results demonstrate a dependence of wrinkling wavelength on crystallographic direction resembling the well-known anisotropic charge-transport properties of rubrene. The observed elastic anisotropy can be correlated to the crystal structure of rubrene (Figure 1 b) and suggests a non-linear coupling between mechanical and electrical properties. This fi nding expands the knowledge of structure-property correlations in organic semiconductors. Furthermore, insight into the mechanical properties of organic single crystals will be useful in defi ning limits on performance, processing, and manufacturing of devices, as well as elucidating their failure under mechanical and thermal loadings. [ 8 ] read less NOT USED (high confidence) J.-M. Leyssale, J.-P. D. Costa, C. Germain, P. Weisbecker, and G. Vignoles, “Structural features of pyrocarbon atomistic models constructed from transmission electron microscopy images,” Carbon. 2012. link Times cited: 70 NOT USED (high confidence) K. Zhang et al., “Structure, stability, and motion of dislocations in double-wall carbon nanotubes,” Chinese Physics B. 2012. link Times cited: 2 Abstract: In this paper, a novel double-wall carbon nanotube (DWCNT) w… read moreAbstract: In this paper, a novel double-wall carbon nanotube (DWCNT) with both edge and screw dislocations is studied by using the molecular dynamics (MD) method. The differences between two adjacent tubule indexes of armchair and zigzag nanotubes are determined to be 5 and 9, respectively, by taking into account the symmetry, integrality, and thermal stability of the composite structures. It is found that melting first occurs near the dislocations, and the melting temperatures of the dislocated armchair and zigzag DWCNTs are around 2600 K—2700 K. At the pre-melting temperatures, the shrink of the dislocation loop, which is comprised of edge and screw dislocations, implies that the composite dislocation in DWCNTs has self-healing ability. The dislocated DWCNTs first fracture at the edge dislocations, which induces the entire break in axial tensile test. The dislocated DWCNTs have a smaller fracture strength compared to the perfect DWCNTs. Our results not only match with the dislocation glide of carbon nanotubes (CNTs) in experiments, but also can free from the electron beam radiation under experimental conditions observed by the high resolution transmission electron microscope (HRTEM), which is deemed to cause the motion of dislocation loop. read less NOT USED (high confidence) C. Wu, T. Senftle, and W. Schneider, “First-principles-guided design of ionic liquids for CO2 capture.,” Physical chemistry chemical physics : PCCP. 2012. link Times cited: 71 Abstract: The identification of sorbents that combine selectively and … read moreAbstract: The identification of sorbents that combine selectively and reversibly with CO(2) is essential for efficient and economical abatement of ever-increasing CO(2) emissions. Room temperature ionic liquids (ILs) are a promising class of potential absorbents, especially when modified to chemically combine with CO(2). In this perspective we describe the evolution of IL-based CO(2) capture chemistries over the last ten years and in particular the important role that first principles simulations have played in helping guide those developments. Current anion-functionalized ILs achieve high CO(2) capture efficiencies tailorable to a wide range of separation conditions and avoid the viscosity problems that plagued the earliest amine-functionalized, CO(2)-reactive ILs. Further progress is needed to develop ILs able to meet all the requirements of a CO(2) separation system, and simulations will play a central role in those developments. read less NOT USED (high confidence) Y. Chen, F. Zhu, H. Liao, S. Song, and S. Liu, “The effect of temperature on compressive mechanical behavior of SWCNT-Ni,” 2012 13th International Conference on Electronic Packaging Technology & High Density Packaging. 2012. link Times cited: 1 Abstract: Now, many specialists and scholars have used atomistic model… read moreAbstract: Now, many specialists and scholars have used atomistic models and continuum models to investigate mechanical behaviors of carbon nanotube about axially compressed buckling.But the studies on axially compressed buckling were mostly theoretic analysis. This work focused on compressive buckling of carbon nanotube plated with nickel in axial movement. In this work, when carbon nanotubes (CNTs) were coated with nickel, mechanical properties of CNTs were discussed. Buckling behavior of single-walled carbon nanotube under the condition of axial compression was defined by the method of molecular dynamics. Then the influence of the nickel on the properties of CNTs could be estimated. In this work, two different situations were considered, which included naked single-walled carbon nanotube (SWCNT) and SWCNT with nickel atoms coated on the surface of SWCNT (SWCNT-Ni). To define the temperature effect, two different models of SWCNT and SWCNT-Ni were analyzed at 300K, 500K and 700K respectively. Then it could be found that the SWCNT was more unstable than SWCNT with nickel atoms at the same temperature, and the deformation of SWCNT-Ni was slower. However, the stiffness of SWCNT was much more than that of SWCNT-Ni. read less NOT USED (high confidence) J. Hur and S. Stuart, “Modified reactive empirical bond-order potential for heterogeneous bonding environments.,” The Journal of chemical physics. 2012. link Times cited: 11 Abstract: An improvement to the AIREBO potential for hydrocarbons is p… read moreAbstract: An improvement to the AIREBO potential for hydrocarbons is presented in which contributions to the bond order are determined by the local bonding environment around the bond, rather than the average of the environments around the two constituent atoms. This bond-centric approach decreases the errors by ~80% in the fullerene-type systems for which the original approach leads to the most severe errors. With the newly developed and parameterized method, energy errors are less than 0.7 eV for a collection of hydrocarbon molecules not used in the fitting. This modified AIREBO potential is expected to be more useful not only for the molecular hydrocarbons and fullerene isomers studied here, but also for the full range of carbon and hydrocarbon systems to which the AIREBO potential has been applied. read less NOT USED (high confidence) T. Liang, B. Devine, S. Phillpot, and S. Sinnott, “Variable charge reactive potential for hydrocarbons to simulate organic-copper interactions.,” The journal of physical chemistry. A. 2012. link Times cited: 89 Abstract: A variable charge reactive empirical potential for carbon-ba… read moreAbstract: A variable charge reactive empirical potential for carbon-based materials, hydrocarbons, organometallics, and their interfaces is developed within the framework of charge optimized many-body (COMB) potentials. The resulting potential contains improved expressions for the bond order and self-energy, which gives a flexible, robust, and integrated treatment of different bond types in multicomponent and multifunctional systems. It furthermore captures the dissociation and formation of the chemical bonds and appropriately and dynamically determines the associated charge transfer, thus providing a powerful method to simulate the complex chemistry of many-atom systems in changing environments. The resulting COMB potential is used in a classical molecular dynamics simulation of the room temperature, low energy deposition of ethyl radicals on the Cu (111) surface (a system with ∼5000 atoms) to demonstrate its capabilities at describing organic-metal interactions in a dynamically changing environment. read less NOT USED (high confidence) J. Jakowski et al., “Optimization of density functional tight-binding and classical reactive molecular dynamics for high-throughput simulations of carbon materials,” Extreme Science and Engineering Discovery Environment. 2012. link Times cited: 2 Abstract: Carbon materials and nanostructures (fullerenes, nanotubes) … read moreAbstract: Carbon materials and nanostructures (fullerenes, nanotubes) are promising building blocks of nanotechnology. Potential applications include optical and electronic devices, sensors, and nano-scale machines. The multiscale character of processes related to fabrication and physics of such materials requires using a combination of different approaches such as (a) classical dynamics, (b) direct Born-Oppenheimer dynamics, (c) quantum dynamics for electrons and (d) quantum dynamics for selected nuclei. We describe our effort on optimization of classical reactive molecular dynamics and density-functional tight binding method, which is a core method in our direct and quantum dynamics studies. We find that optimization is critical for efficient use of high-end machines. Choosing the optimal configuration for the numerical library and compilers can result in four-fold speedup of direct dynamics as compared with default programming environment. The integration algorithm and parallelization approach must also be tailored for the computing environment. The efficacy of possible choices is discussed. read less NOT USED (high confidence) J. Schrier, “Carbon dioxide separation with a two-dimensional polymer membrane.,” ACS applied materials & interfaces. 2012. link Times cited: 121 Abstract: Carbon dioxide gas separation is important for many environm… read moreAbstract: Carbon dioxide gas separation is important for many environmental and energy applications. Molecular dynamics simulations are used to characterize a two-dimensional hydrocarbon polymer, PG-ES1, that uses a combination of surface adsorption and narrow pores to separate carbon dioxide from nitrogen, oxygen, and methane gases. The CO2 permeance is 3 × 10(5) gas permeation units (GPU). The CO2/N2 selectivity is 60, and the CO2/CH4 selectivity exceeds 500. The combination of high CO2 permeance and selectivity surpasses all known materials, enabling low-cost postcombustion CO2 capture, utilization of landfill gas, and horticulture applications. read less NOT USED (high confidence) P. T. Araujo et al., “In situ atomic force microscopy tip-induced deformations and Raman spectroscopy characterization of single-wall carbon nanotubes.,” Nano letters. 2012. link Times cited: 16 Abstract: In this work, an atomic force microscope (AFM) is combined w… read moreAbstract: In this work, an atomic force microscope (AFM) is combined with a confocal Raman spectroscopy setup to follow in situ the evolution of the G-band feature of isolated single-wall carbon nanotubes (SWNTs) under transverse deformation. The SWNTs are pressed by a gold AFM tip against the substrate where they are sitting. From eight deformed SWNTs, five exhibit an overall decrease in the Raman signal intensity, while three exhibit vibrational changes related to the circumferential symmetry breaking. Our results reveal chirality dependent effects, which are averaged out in SWNT bundle measurements, including a previously elusive mode symmetry breaking that is here explored using molecular dynamics calculations. read less NOT USED (high confidence) Z. Qin and M. Buehler, “Bioinspired design of functionalised graphene,” Molecular Simulation. 2012. link Times cited: 15 Abstract: Functionalised graphene is an attractive candidate for novel… read moreAbstract: Functionalised graphene is an attractive candidate for novel applications in the fabrication of nanodevices or novel composites. Here, we apply molecular dynamics simulations to investigate the assembly of functionalised graphene ribbons and sheets. We illustrate that by designing the location and density of functional groups, the material self-assembles into a defined stable folded structure with lower energy and mechanical properties distinct from the pristine graphene. We show that the hydrogen bonds formed between the functional groups are crucial for this folding process, similar to the driving forces of assembly in many biological protein materials. We propose that such functionalised graphene materials could be employed to realise the bottom-up design of structural materials with tunable mechanical properties as they are expected to achieve multiple mechanical functions under varied conditions. read less NOT USED (high confidence) J. Baimova, S. Dmitriev, and K. Zhou, “Strain‐induced ripples in graphene nanoribbons with clamped edges,” physica status solidi (b). 2012. link Times cited: 41 Abstract: Molecular dynamics is employed to study the mechanical behav… read moreAbstract: Molecular dynamics is employed to study the mechanical behavior of graphene nanoribbons with clamped edges under in‐plane strain. Buckling of nanoribbons results in the appearance of periodic ripples whose orientation, wavelength, and amplitude can be controlled by varying strain components and nanoribbon width. This study shows a way of controlling physical properties of nanoribbons by introducing strain‐induced ripples. read less NOT USED (high confidence) N. Klimov et al., “Electromechanical Properties of Graphene Drumheads,” Science. 2012. link Times cited: 240 Abstract: Straining Suspended Graphene The electronic properties of gr… read moreAbstract: Straining Suspended Graphene The electronic properties of graphene are best displayed by suspended sheets free from contact with an underlying substrate. Klimov et al. (p. 1557) probed how deformation of suspended graphene sheets could lead to further tuning of its electronic properties with a scanning tunneling microscope; the graphene sheets could also be deformed via an electric field from an underlying electrode. Spectroscopic studies reveal that the induced strain led to charge-carrier localization into spatially confined quantum dots, an effect consistent with the formation of strain-induced pseudomagnetic fields. Mechanical straining of suspended graphene films leads to confinement of charge carriers into quantum dots. We determined the electromechanical properties of a suspended graphene layer by scanning tunneling microscopy (STM) and scanning tunneling spectroscopy (STS) measurements, as well as computational simulations of the graphene-membrane mechanics and morphology. A graphene membrane was continuously deformed by controlling the competing interactions with a STM probe tip and the electric field from a back-gate electrode. The probe tip–induced deformation created a localized strain field in the graphene lattice. STS measurements on the deformed suspended graphene display an electronic spectrum completely different from that of graphene supported by a substrate. The spectrum indicates the formation of a spatially confined quantum dot, in agreement with recent predictions of confinement by strain-induced pseudomagnetic fields. read less NOT USED (high confidence) T. Luo and J. Lloyd, “Enhancement of Thermal Energy Transport Across Graphene/Graphite and Polymer Interfaces: A Molecular Dynamics Study,” Advanced Functional Materials. 2012. link Times cited: 306 Abstract: Understanding thermal energy transport in polymeric nanocomp… read moreAbstract: Understanding thermal energy transport in polymeric nanocomposite materials is important to the engineering of polymer composites with better engineered heat transfer properties. Interfacial thermal resistance between the filling particles and the polymer matrices is a major bottleneck for the thermal conductivity improvement of polymer composite materials. Here, thermal energy transport in graphene/graphite‐polymer (paraffin wax‐C30H62) composite systems are systematically studied using molecular dynamics simulations. The influences of graphene size, interfacial bonding strength, and polymer density on the interfacial thermal transport are studied. According to the simulation results, approaches to improve interfacial thermal transport are proposed. Spectral analysis is performed to explore the mechanism of thermal transport. It is found that thermal energy transport across graphene/graphite‐polymer interfaces can be enhanced by increasing the polymer density and graphene size or forming covalent bonds between the graphite edges and polymer molecules. The results offer valuable guidance on improving thermal transport properties of polymeric nanocomposite. read less NOT USED (high confidence) M. P. Ariza, R. Serrano, J. P. Mendez, and M. Ortiz, “Stacking faults and partial dislocations in graphene,” Philosophical Magazine. 2012. link Times cited: 15 Abstract: We investigate two mechanisms of crystallographic slip in gr… read moreAbstract: We investigate two mechanisms of crystallographic slip in graphene, corresponding to glide and shuffle generalized stacking faults (GSF), and compute their γ-curves using Sandia National Laboratories Large-scale Atomic/Molecular Massively Parallel Simulator (LAMMPS). We find evidence of metastable partial dislocations for the glide GSF only. The computed values of the stable and unstable stacking-fault energies are suggestive of a high stability of full dislocations against dissociation and of dislocation dipoles against annihilation. read less NOT USED (high confidence) S. Zhao, J. Xue, Y. Wang, and S. Yan, “Chemical bonding assisted damage production in single-walled carbon nanotubes induced by low-energy ions,” Applied Physics A. 2012. link Times cited: 8 NOT USED (high confidence) L. Pastewka, M. Mrovec, M. Moseler, and P. Gumbsch, “Bond order potentials for fracture, wear, and plasticity,” MRS Bulletin. 2012. link Times cited: 55 Abstract: Coulson’s bond order is a chemically intuitive quantity that… read moreAbstract: Coulson’s bond order is a chemically intuitive quantity that measures the difference in the occupation of bonding and anti-bonding orbitals. Both empirical and rigorously derived bond order expressions have evolved in the course of time and proven very useful for atomistic modeling of materials. The latest generation of empirical formulations has recently been augmented by screening-function approaches. Using friction and wear of diamond and diamond-like carbon as examples, we demonstrate that such a screened bond order scheme allows for a faithful description of dynamical bond-breaking processes in materials far from equilibrium. The rigorous bond order expansions are obtained by systematic coarse-graining of the tight binding approximation and form a bridge between the electronic structure and the atomistic modeling hierarchies. They have enabled bottom-up derivations of bond order potentials for covalently bonded semiconductors, transition metals, and multicomponent intermetallics. The recently developed magnetic bond order potential gives a correct description of both directional covalent bonds and magnetic interactions in iron and is able to correctly predict the stability of bulk Fe polymorphs as well as the intricate properties of dislocation cores. The bond order schemes hence represent a family of reliable and powerful models that can be applied in large-scale simulations of complex processes involving fracture, wear, and plasticity. read less NOT USED (high confidence) O. Yermolenko and G. V. Kornich, “Molecular dynamics simulation of the ion bombardment of interlayer Cu13 clusters in graphite,” Bulletin of the Russian Academy of Sciences: Physics. 2012. link Times cited: 0 NOT USED (high confidence) M. T. Knippenberg, P. Mikulski, K. E. Ryan, S. Stuart, G. Gao, and J. Harrison, “Bond-order potentials with split-charge equilibration: application to C-, H-, and O-containing systems.,” The Journal of chemical physics. 2012. link Times cited: 25 Abstract: A method for extending charge transfer to bond-order potenti… read moreAbstract: A method for extending charge transfer to bond-order potentials, known as the bond-order potential/split-charge equilibration (BOP/SQE) method [P. T. Mikulski, M. T. Knippenberg, and J. A. Harrison, J. Chem. Phys. 131, 241105 (2009)], is integrated into a new bond-order potential for interactions between oxygen, carbon, and hydrogen. This reactive potential utilizes the formalism of the adaptive intermolecular reactive empirical bond-order potential [S. J. Stuart, A. B. Tutein, and J. A. Harrison, J. Chem. Phys. 112, 6472 (2000)] with additional terms for oxygen and charge interactions. This implementation of the reactive potential is able to model chemical reactions where partial charges change in gas- and condensed-phase systems containing oxygen, carbon, and hydrogen. The BOP/SQE method prevents the unrestricted growth of charges, often observed in charge equilibration methods, without adding significant computational time, because it makes use of a quantity which is calculated as part of the underlying covalent portion of the potential, namely, the bond order. The implementation of this method with the qAIREBO potential is designed to provide a tool that can be used to model dynamics in a wide range of systems without significant computational cost. To demonstrate the usefulness and flexibility of this potential, heats of formation for isolated molecules, radial distribution functions of liquids, and energies of oxygenated diamond surfaces are calculated. read less NOT USED (high confidence) O. Yermolenko, G. V. Kornich, and S. Buga, “Molecular dynamics simulation of the low-energy interaction between Cun@C60 endofullerenes and the surface of a copper crystal,” Journal of Surface Investigation. X-ray, Synchrotron and Neutron Techniques. 2012. link Times cited: 0 NOT USED (high confidence) K. Farah, F. Müller-Plathe, and M. Böhm, “Classical reactive molecular dynamics implementations: state of the art.,” Chemphyschem : a European journal of chemical physics and physical chemistry. 2012. link Times cited: 71 Abstract: Reactive molecular dynamics (RMD) implementations equipped w… read moreAbstract: Reactive molecular dynamics (RMD) implementations equipped with force field approaches to simulate both the time evolution as well as chemical reactions of a broad class of materials are reviewed herein. We subdivide the RMD approaches developed during the last decade as well as older ones already reviewed in 1995 by Srivastava and Garrison and in 2000 by Brenner into two classes. The methods in the first RMD class rely on the use of a reaction cutoff distance and employ a sudden transition from the educts to the products. Due to their simplicity these methods are well suited to generate equilibrated atomistic or material-specific coarse-grained polymer structures. In connection with generic models they offer useful qualitative insight into polymerization reactions. The methods in the second RMD class are based on empirical reactive force fields and implement a smooth and continuous transition from the educts to the products. In this RMD class, the reactive potentials are based on many-body or bond-order force fields as well as on empirical standard force fields, such as CHARMM, AMBER or MM3 that are modified to become reactive. The aim with the more sophisticated implementations of the second RMD class is the investigation of the reaction kinetics and mechanisms as well as the evaluation of transition state geometries. Pure or hybrid ab initio, density functional, semi-empirical, molecular mechanics, and Monte Carlo methods for which no time evolution of the chemical systems is achieved are excluded from the present review. So are molecular dynamics techniques coupled with quantum chemical methods for the treatment of the reactive regions, such as Car-Parinello molecular dynamics. read less NOT USED (high confidence) H. Aktulga, J. C. Fogarty, S. A. Pandit, and A. Grama, “Parallel reactive molecular dynamics: Numerical methods and algorithmic techniques,” Parallel Comput. 2012. link Times cited: 681 NOT USED (high confidence) B. Peng, Y. Li, S. Liu, Z. Guo, and L. Ding, “The roles of crosslinks in the buckling behaviors and load transferring mechanisms of double-walled nanotubes under compression,” Computational Materials Science. 2012. link Times cited: 5 NOT USED (high confidence) R. C. Ehemann, P. Krstic, J. Dadras, P. Kent, and J. Jakowski, “Detection of hydrogen using graphene,” Nanoscale Research Letters. 2012. link Times cited: 25 NOT USED (high confidence) M. Bosson, S. Grudinin, X. Bouju, and S. Redon, “Interactive physically-based structural modeling of hydrocarbon systems,” J. Comput. Phys. 2012. link Times cited: 24 NOT USED (high confidence) B. A. Stormer et al., “Mechanical properties of SWNT X-Junctions through molecular dynamics simulation,” International Journal of Smart and Nano Materials. 2012. link Times cited: 13 Abstract: The mechanical behavior of seven different carbon nanotube (… read moreAbstract: The mechanical behavior of seven different carbon nanotube (CNT) X-junctions with a varying number of bonds was investigated through molecular dynamics simulations. The X-junctions are composed of two (6,0) single-walled carbon nanotubes (SWNTs) created via vibration-assisted heat welding. The junctions, containing anywhere between one and seven bonds, are subject to uniaxial tensile, shear and torsional strain, and then the stiffness values are determined for each case. When subjected to tensile and shear strain, both the arrangement and orientation of bonds are found to affect the stiffness of junctions more substantially than the number of bonds, bond length or bond order. Surprisingly, anisotropic shear behavior is observed in the X-junctions, which can be attributed to the junction's bond orientation. Also, the stiffness of X-junctions tested under an applied torque (torsion) differs from the stiffness under tensile and shear strain, however, in that it is more substantially affected by the number of bonds present in the junction than by any other property. read less NOT USED (high confidence) P. Pahari and S. Chaturvedi, “Determination of best-fit potential parameters for a reactive force field using a genetic algorithm,” Journal of Molecular Modeling. 2012. link Times cited: 32 NOT USED (high confidence) A. Muniz and D. Maroudas, “Formation of fullerene superlattices by interlayer bonding in twisted bilayer graphene,” Journal of Applied Physics. 2012. link Times cited: 27 Abstract: Based on first-principles density functional theory calculat… read moreAbstract: Based on first-principles density functional theory calculations, we report a novel class of carbon nanostructures consisting of superlattice arrangements of caged fullerene configurations of various sizes embedded within planes of twisted bilayer graphene. Formation of these structures is the outcome of interlayer C-C bonding between pairs of graphene planes chemically modified with certain patterns of chemisorbed hydrogen and rotated with respect to each other by angles around 30°. A specific subclass of these nanostructures preserves the main features of the electronic structure of pristine single-layer graphene. Our study proposes possible functionalization strategies to systematically tailor the electronic properties of bilayer graphene. read less NOT USED (high confidence) D. Spagnoli and J. Gale, “Atomistic theory and simulation of the morphology and structure of ionic nanoparticles.,” Nanoscale. 2012. link Times cited: 12 Abstract: Computational techniques are widely used to explore the stru… read moreAbstract: Computational techniques are widely used to explore the structure and properties of nanomaterials. This review surveys the application of both quantum mechanical and force field based atomistic simulation methods to nanoparticles, with a particular focus on the methodologies available and the ways in which they can be utilised to study structure, phase stability and morphology. The main focus of this article is on partially ionic materials, from binary semiconductors through to mineral nanoparticles, with more detailed considered of three examples, namely titania, zinc sulphide and calcium carbonate. read less NOT USED (high confidence) O. Glukhova, A. Kolesnikova, E. Kossovich, and R. Y. Zhnichkov, “Super strong nanoindentors for biomedical applications based on bamboo-like nanotubes,” Other Conferences. 2012. link Times cited: 7 Abstract: The results of quantum-chemical analysis of elastic and stre… read moreAbstract: The results of quantum-chemical analysis of elastic and strength properties of the bamboo-like tube are presented in this paper. For the first time the configuration of the thinnest stable bamboo-like tube was established. The bamboo-like nanotube breaking point is established to be under compression of 11GPa. Configuration of the nanoindentor based on symmetric and streamlined tip of the tube (15,15), presented in this work, provides perfect interaction between the nanoindentor tip and the tissue because tip has no sharp protruding pieces. read less NOT USED (high confidence) F. Liu, Q. H. Tang, B. S. Shang, and T. C. Wang, “Simple optimized Brenner potential for thermodynamic properties of diamond,” Philosophical Magazine. 2012. link Times cited: 3 Abstract: We have examined the commonly used Brenner potentials in the… read moreAbstract: We have examined the commonly used Brenner potentials in the context of the thermodynamic properties of diamond. A simple optimized Brenner potential is proposed that provides very good predictions of the thermodynamic properties of diamond. It is shown that, compared to the experimental data, the lattice wave theory of molecular dynamics (LWT) with this optimized Brenner potential can accurately predict the temperature dependence of specific heat, lattice constant, Grüneisen parameters and coefficient of thermal expansion (CTE) of diamond. read less NOT USED (high confidence) J.-M. Leyssale, G. Vignoles, and A. Villesuzanne, “Rippled nanocarbons from periodic arrangements of reordered bivacancies in graphene or nanotubes.,” The Journal of chemical physics. 2012. link Times cited: 7 Abstract: We report on various nanocarbons formed from a unique struct… read moreAbstract: We report on various nanocarbons formed from a unique structural pattern containing two pentagons, three hexagons, and two heptagons, resulting from local rearrangements around a divacancy in pristine graphene, or nanotubes. This defect can be inserted in sheets or tubes either individually or as extended defect lines. Sheets or tubes containing only this defect as a pattern can also be obtained. These fully defective sheets, and most of the tubes, present a very pronounced rippled (wavy) structure and their energies are lower than other structures based on pentagons and heptagons published so far. Another particularity of these rippled carbon sheets is their ability to fold themselves into a two-dimensional porous network of interconnected tubes upon heat treatment as shown by hybrid Monte Carlo simulations. Finally, contrary to the common belief that pentagon/heptagon based structures are metallic, this work shows that this defect pattern should give rise to semimetallic conduction. read less NOT USED (high confidence) A. Vanossi, N. Manini, M. Urbakh, S. Zapperi, and E. Tosatti, “Colloquium: Modeling friction: From nanoscale to mesoscale,” Reviews of Modern Physics. 2011. link Times cited: 359 Abstract: The physics of sliding friction is gaining impulse from nano… read moreAbstract: The physics of sliding friction is gaining impulse from nanoscale and mesoscale experiments, simulations, and theoretical modeling. This Colloquium reviews some recent developments in modeling and in atomistic simulation of friction, covering open-ended directions, unconventional nanofrictional systems, and unsolved problems. read less NOT USED (high confidence) T. W. Kemper and S. Sinnott, “Mechanisms of Ion-Beam Modification of Terthiophene Oligomers from Atomistic Simulations,” Journal of Physical Chemistry C. 2011. link Times cited: 5 Abstract: Ion-beam deposition on organic surfaces is a common approach… read moreAbstract: Ion-beam deposition on organic surfaces is a common approach to induce surface modification. Here, the difference in argon and polyatomic thiophene hyperthermal deposition on terthiophene oligomers is explored in classical molecular dynamics simulations. The forces on the atoms are determined using the second-generation reactive empirical bond order potential for hydrocarbons that is modified to include sulfur. Details of the potential fit and parametrization are provided. The simulations predict that the thiophene induces fracture of the terthiophene rings while largely retaining the chemical structure of terthiophene. Conversely, argon is predicted to alter the number of carbons within the terthiophene during modification. read less NOT USED (high confidence) V. Kuzkin and A. Krivtsov, “Description for mechanical properties of graphene using particles with rotational degrees of freedom,” Doklady Physics. 2011. link Times cited: 25 NOT USED (high confidence) D. Duffy, “Modelling materials for fusion power,” International Materials Reviews. 2011. link Times cited: 12 Abstract: Fusion has the potential for delivering safe, clean, low car… read moreAbstract: Fusion has the potential for delivering safe, clean, low carbon power; however, significant scientific and engineering hurdles must first be overcome. One such hurdle is the design of materials that will withstand the harsh conditions. The materials which line the vessel walls will experience exceptionally high heat and particle fluxes, which will gradually erode the materials and contaminate the plasma. The deuterium–tritium fusion reaction will produce high energy neutrons, which will create defects and transmutation reactions in the vessel walls. These defects, along with the transmutation gasses, evolve over time and change the microstructure and properties of the material. In order to design suitable materials for fusion, the radiation damage, and its evolution over time, must be understood and evaluated for a broad class of materials. Modelling has a vital role to play because it can provide details about processes that occur on length and timescales that are inaccessible to experiment. In this review, the challenges that face designers of fusion power plants are discussed. The modelling techniques that are used to model radiation effects are described and the links between modelling and experiment are discussed. The review concludes with a discussion about the future direction for fusion materials research. read less NOT USED (high confidence) Z. Zhang and T. Li, “Determining graphene adhesion via substrate-regulated morphology of graphene,” Journal of Applied Physics. 2011. link Times cited: 58 Abstract: Understanding the adhesion between graphene and other materi… read moreAbstract: Understanding the adhesion between graphene and other materials is crucial for achieving more reliable graphene-based applications in electronic devices and nanocomposites. The ultra-thin profile of graphene, however, poses a significant challenge to direct measurement of its adhesion property using conventional approaches. We show that there is a strong correlation between the morphology of graphene on a compliant substrate with patterned surface and the graphene-substrate adhesion. We establish an analytic model to quantitatively determine such a strong correlation. Results show that, depending on the graphene-substrate adhesion, number of graphene layers, and substrate stiffness, graphene exhibits two distinct types of morphology: (I) graphene remains bonded to the substrate and corrugates to an amplitude up to that of the substrate surface patterns; (II) graphene debonds from the substrate and remains flat on top of the substrate surface patterns. The sharp transition between these two types of graphe... read less NOT USED (high confidence) C. Chou and M. Buehler, “Bond energy effects on strength, cooperativity and robustness of molecular structures,” Interface Focus. 2011. link Times cited: 11 Abstract: A fundamental challenge in engineering biologically inspired… read moreAbstract: A fundamental challenge in engineering biologically inspired materials and systems is the identification of molecular structures that define fundamental building blocks. Here, we report a systematic study of the effect of the energy of chemical bonds on the mechanical properties of molecular structures, specifically, their strength and robustness. By considering a simple model system of an assembly of bonds in a cluster, we demonstrate that weak bonding, as found for example in H-bonds, results in a highly cooperative behaviour where clusters of bonds operate synergistically to form relatively strong molecular clusters. The cooperative effect of bonding results in an enhanced robustness since the drop of strength owing to the loss of a bond in a larger cluster only results in a marginal reduction of the strength. Strong bonding, as found in covalent interactions such as disulphide bonds or in the backbone of proteins, results in a larger mechanical strength. However, the ability for bonds to interact cooperatively is lost, and, as a result, the overall robustness is lower since the mechanical strength hinges on individual bonds rather than a cluster of bonds. The systematic analysis presented here provides general insight into the interplay of bond energy, robustness and other geometric parameters such as bond spacing. We conclude our analysis with a correlation of structural data of natural protein structures, which confirms the conclusions derived from our study. read less NOT USED (high confidence) A. Kumar, S. Mukherjee, J. T. Paci, K. Chandraseker, and G. Schatz, “A rod model for three dimensional deformations of single-walled carbon nanotubes,” International Journal of Solids and Structures. 2011. link Times cited: 35 NOT USED (high confidence) B. Devine et al., “Atomistic simulations of copper oxidation and Cu/Cu2O interfaces using charge-optimized many-body potentials,” Physical Review B. 2011. link Times cited: 64 Abstract: Bryce Devine,1 Tzu-Ray Shan( ),1 Yu-Ting Cheng( ),1 Alan J. … read moreAbstract: Bryce Devine,1 Tzu-Ray Shan( ),1 Yu-Ting Cheng( ),1 Alan J. H. McGaughey,1,2 Minyoung Lee,2 Simon R. Phillpot,1 and Susan B. Sinnott1,* 1Department of Materials Science and Engineering, University of Florida, Gainesville, FL 32611-6400, USA 2Department of Mechanical Engineering, Carnegie-Mellon University, Pittsburgh, PA, 15213, USA (Received 14 February 2011; revised manuscript received 21 July 2011; published 12 September 2011) read less NOT USED (high confidence) O. Glukhova and A. Kolesnikova, “Empirical modeling of longitudinal tension and compression of graphene nanoparticles and nanoribbons,” Physics of the Solid State. 2011. link Times cited: 11 NOT USED (high confidence) X. Yang, P. He, and H. Gao, “Modeling frequency- and temperature-invariant dissipative behaviors of randomly entangled carbon nanotube networks under cyclic loading,” Nano Research. 2011. link Times cited: 46 NOT USED (high confidence) H. S. Park, M. Devel, and Z. Wang, “A new multiscale formulation for the electromechanical behavior of nanomaterials,” Computer Methods in Applied Mechanics and Engineering. 2011. link Times cited: 18 NOT USED (high confidence) S. W. Cranford and M. Buehler, “Twisted and coiled ultralong multilayer graphene ribbons,” Modelling and Simulation in Materials Science and Engineering. 2011. link Times cited: 100 Abstract: The mechanical behavior and properties of multilayer graphen… read moreAbstract: The mechanical behavior and properties of multilayer graphene sheets and nanoribbons have been a subject of intensive research in recent years, due to their potential in electronic, structural and thermal applications. Calculations of effective properties range from molecular dynamic simulations to use of structural mechanical continuum models. Here, structural and elastic parameters are obtained via full atomistic simulations, and a two-dimensional mesoscopic model for a sheet of graphene is developed utilizing coarse-grain bead-spring elements with rotational-spring potentials. The assertion of energy conservation between atomistic and mesoscale models through elastic strain energy is enforced to arrive at model parameters, incorporating normal and shear strains, out-of-plane bending and intramolecular interactions. We then apply our mesoscopic model to investigate the structure and conformational behavior of twisted ultralong multilayer graphene ribbons with lengths of hundreds of nanometers, representing several millions of individual atoms, beyond the accessible regime of full atomistic molecular dynamics. We find a distinct transition from a twisted (saddle-like) configuration to a helical (coil-like) configuration as a function of imposed rotation and number of graphene layers. Further, for single layer graphene ribbons, multiple, stable configurations occur at discrete rotations due to the surface adhesion. The model developed and applied here can be more generally used to investigate properties of other two-dimensional membrane and ribbon-like systems for mesoscale hierarchical material design. read less NOT USED (high confidence) C. Cornwell and C. R. Welch, “Brittle ductile transition in carbon nanotube bundles,” Molecular Simulation. 2011. link Times cited: 1 Abstract: The superior strength and stiffness of carbon nanotubes (CNT… read moreAbstract: The superior strength and stiffness of carbon nanotubes (CNTs) make them attractive for many structural applications. Although the strength and stiffness of CNTs are extremely high, fibres of aligned CNTs have been found to date to be far weaker than the constituent CNTs. The intermolecular interactions between the CNTs in the fibres are governed by weak van der Waals forces, resulting in slippage between CNTs which occurs at tensions well below the breaking strength of the CNTs. Both theoretical and experimental studies show that by introducing chemical bonds between the CNTs increases load transfer and prevents the CNTs from slipping. read less NOT USED (high confidence) K. Nordlund et al., “Mechanism of swift chemical sputtering: comparison of Be/C/W dimer bond breaking,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2011. link Times cited: 9 NOT USED (high confidence) C. Cornwell and C. R. Welch, “Very-high-strength (60-GPa) carbon nanotube fiber design based on molecular dynamics simulations.,” The Journal of chemical physics. 2011. link Times cited: 60 Abstract: The mechanical properties of carbon nanotubes such as low de… read moreAbstract: The mechanical properties of carbon nanotubes such as low density, high stiffness, and exceptional strength make them ideal candidates for reinforcement material in a wide range of high-performance composites. Molecular dynamics simulations are used to predict the tensile response of fibers composed of aligned carbon nanotubes with intermolecular bonds of interstitial carbon atoms. The effects of bond density and carbon nanotube length distribution on fiber strength and stiffness are investigated. The interstitial carbon bonds significantly increase load transfer between the carbon nanotubes over that obtained with van der Waals forces. The simulation results indicate that fibers with tensile strengths to 60 GPa could be produced by employing interstitial cross-link atoms. The elastic modulus of the fibers is also increased by the bonds. read less NOT USED (high confidence) D. Wei, Y. Song, and F. Wang, “A simple molecular mechanics potential for μm scale graphene simulations from the adaptive force matching method.,” The Journal of chemical physics. 2011. link Times cited: 54 Abstract: A simple molecular mechanics force field for graphene (PPBE-… read moreAbstract: A simple molecular mechanics force field for graphene (PPBE-G) was created by force matching the density functional theory Perdew-Burke-Ernzerhof forces using the adaptive force matching method recently developed in our group. The PPBE-G potential was found to provide significantly more accurate forces than other existing force fields. Several properties of graphene, such as Young's modulus, bending rigidity, and thermal conductivity, have been studied with our potential. The calculated properties are in good agreement with corresponding density functional theory and experimental values. The thermal conductivity calculated with reverse non-equilibrium molecular dynamics depends sensitively on graphene size thus requiring the simulation of large sheets for convergence. Since the PPBE-G potential only contains simple additive energy expressions, it is very computationally efficient and is capable of modeling large graphene sheets in the μm length scale. read less NOT USED (high confidence) F. Wang and Y.-pu Zhao, “The unique properties of the solid-like confined liquid films: A large scale molecular dynamics simulation approach,” Acta Mechanica Solida Sinica. 2011. link Times cited: 14 NOT USED (high confidence) J. Marian, “Generation of an amorphous graphite substrate by cumulative deuterium bombardment using molecular dynamics with full nonbonded interactions,” Journal of Applied Physics. 2011. link Times cited: 0 Abstract: A deuterated amorphous carbon target is generated from a fre… read moreAbstract: A deuterated amorphous carbon target is generated from a fresh graphite layer via hyperthermal irradiation with deuterium ions using molecular dynamics (MD) simulations. We use interatomic potentials that include nonbonded (long-range) interactions for maximum accuracy and simulate cumulative bombardment up to doses of 5.80 × 1016 ions cm−2 at 1000 K. The graphite target goes through several stages of erosion and swelling, leading to complete amorphization and significant density loss. The calculations show a transition from graphitelike hybridization to a mixture of diamondlike and linear hybridizations with dose. It is concluded that the current sample sizes obtained directly by cumulative irradiation affordable with MD are not sufficiently large to be used for sputtering calculations under steady-state conditions. read less NOT USED (high confidence) A. Khoei, E. Ban, P. Banihashemi, and M. J. A. Qomi, “Effects of temperature and torsion speed on torsional properties of single-walled carbon nanotubes,” Materials Science and Engineering: C. 2011. link Times cited: 33 NOT USED (high confidence) A. K. Naieni, P. Yaghoobi, D. Woodsworth, and A. Nojeh, “Structural deformations and current oscillations in armchair-carbon nanotube cross devices: a theoretical study,” Journal of Physics D: Applied Physics. 2011. link Times cited: 7 Abstract: A carbon nanotube (CNT) cross is a structure consisting of t… read moreAbstract: A carbon nanotube (CNT) cross is a structure consisting of two CNTs with one draped over the other at an angle. Because of the localized mechanical deformation induced at the intersection point, the electronic properties of the nanotubes in a cross could vary significantly compared with those of intact nanotubes, potentially leading to the formation of nanoscale quantum dots. Using classical molecular dynamics, we determined the relaxed nanotube structures and the induced mechanical deformations in a CNT cross. We found that the final relaxed shape of the cross structure is relatively insensitive to the starting shape. We then calculated the electronic transport properties of this device using a first-principles, non-equilibrium Green's function approach. We obtained current oscillations that can be attributed to the formation of a nanoscale quantum dot in the top nanotube at the intersection region. read less NOT USED (high confidence) T. Kunze, S. Gemming, M. Posselt, and G. Seifert, “Tribological Aspects of Carbon-Based Nanocoatings – Theory and Simulation,” Zeitschrift für Physikalische Chemie. 2011. link Times cited: 2 Abstract: Nanocoatings have the potential to improve the surface prope… read moreAbstract: Nanocoatings have the potential to improve the surface properties of various materials. They are of extreme importance for surfaces in sliding contact such as highly stressed engine parts. Here, nanocoatings have to be optimized with respect to low friction properties and a high wear resistance to enhance the energetic and environmental efficiency. An important example are diamond-like carbon (DLC) films, which exhibit high mechanical stability depending on their deposition process. We present an introduction to this field of tribology by giving a short overview on DLC films, on the influence of lubricants from a theoretical point of view and in a broader sense, on basic principles of modeling tribological processes with molecular dynamic methods. read less NOT USED (high confidence) P. Mikulski, K. Workum, G. M. Chateaueuf, G. Gao, J. Schall, and J. Harrison, “The Effects of Interface Structure and Polymerization on the Friction of Model Self-Assembled Monolayers,” Tribology Letters. 2011. link Times cited: 10 NOT USED (high confidence) Y. Li, “Twist-enhanced stretchability of graphene nanoribbons: a molecular dynamics study,” Journal of Physics D: Applied Physics. 2010. link Times cited: 23 Abstract: Graphene nanoribbons (GNRs) have many applications in electr… read moreAbstract: Graphene nanoribbons (GNRs) have many applications in electronics due to their exceptional mechanical, electronic and thermal properties. In order to utilize GNRs for stretchable electronics, it is an important issue to enhance the stretchability of GNRs. In this work, we report that the stretchability of GNRs can be considerably strengthened by a small twist angle through molecular dynamics simulations. Compared with the tension simulation on untwisted GNRs, twist effect can help the C–C covalent bond go into large nonlinear deformation, when the twisted GNR is under tension. Therefore, the breaking strain of a twisted GNR can be 37.6% larger than that of an untwisted one at room temperature. At the same time, the stiffness of the twisted GNR could also be enhanced. Such results could be useful for further application of GNRs in stretchable electronics with multi-functionality. read less NOT USED (high confidence) A. Muniz and D. Maroudas, “Hydrogenation effects on the structure and morphology of graphene and single-walled carbon nanotubes,” Journal of Applied Physics. 2010. link Times cited: 14 Abstract: A systematic computational study is presented of the effects… read moreAbstract: A systematic computational study is presented of the effects of atomic hydrogen chemisorption on the structure and morphology of graphene layers and single-walled carbon nanotubes (SWCNTs). The study is based on a combination of classical molecular-dynamics (MD) and Monte Carlo simulations of structural and compositional relaxation of the hydrogenated surfaces, employing hydrogen distributions consistent with experimental observations and first-principles calculations. Results are reported for the strains induced on the graphene and the SWCNTs, as a result of sp2-sp3 bonding transitions due to atomic H chemisorption, and their dependence on the H surface coverage, Θ, over the entire range 0≤Θ≤1 and on nanotube diameters and chiralities. Detailed structural analysis of the relaxed hydrogenated surfaces demonstrates a tendency for clustering of hydrogenated and of nonhydrogenated sites; this leads to surface morphologies characterized by ripples, which consist of hills that form due to clustering of hydroge... read less NOT USED (high confidence) M. Schwarzbart, A. Steindl, and H. Troger, “Buckling of Carbon Nanotubes: a Molecular Static Approach,” PAMM. 2010. link Times cited: 2 Abstract: Axially loaded cylindrical continuous shells collapse either… read moreAbstract: Axially loaded cylindrical continuous shells collapse either globally like a rod (Euler buckling), or locally (local shell wall buckling), depending on the ratio of the length of the shell over the diameter [1]. There are many published investigations, which show that this behaviour is also true for Carbon Nanotubes CNTs [2]. In this work a systematic analysis of the problem is given in the framework of molecular statics. This approach has the advantage of taking care of the discrete structure of CNTs. The covalent bonds of the hexagonal carbon network are modelled as nonlinear springs, and the compressive load is applied quasistatically, excluding follower forces. The software package LAMMPS [3] offers the AIREBO potential [4] and is suitable for describing CNTs. To identify the stability boundary in the parameter plane, LAMMPS is extended to compute the definiteness of the Hessian. (© 2010 Wiley‐VCH Verlag GmbH & Co. KGaA, Weinheim) read less NOT USED (high confidence) K. L. Joshi, A. Duin, and T. Jacob, “Development of a ReaxFF description of gold oxides and initial application to cold welding of partially oxidized gold surfaces,” Journal of Materials Chemistry. 2010. link Times cited: 30 Abstract: We present the ReaxFF reactive force field methodology for m… read moreAbstract: We present the ReaxFF reactive force field methodology for modeling a gold–oxygen binary system. The force field parameters were fitted against a data set including equations of state, heats of formation and binding energies derived from DFT calculations. The trained force field was then used to study the diffusion properties of oxygen on a gold surface. The diffusion study shows that oxygen atoms have a relatively low mobility on the gold surface. We also present a prospective application of this force field by performing molecular dynamics simulations studying the effect of oxidation level on contact strength of a cold welded joint. The results indicate that low levels of oxidation can significantly impact the joint cohesive energy. read less NOT USED (high confidence) M. Ma, J. Z. Liu, L. Wang, L. Shen, and Q. Zheng, “Effects of vacancies on interwall spacings of multi-walled carbon nanotubes,” Journal of Zhejiang University-SCIENCE A. 2010. link Times cited: 2 Abstract: We use molecular dynamics (MD) simulations to study the effe… read moreAbstract: We use molecular dynamics (MD) simulations to study the effects of vacancies on tube diameters and interwall spacings of multi-walled carbon nanotubes (MWCNTs). Two types of vacancies, double vacancy and three dangling-bond (3DB) single vacancy, are identified to have opposite effects on the tube size change, which explains the inconsistency of the experimentally measured interwall spacings of MWCNTs after electron beam irradiation. A theoretical model to quantitatively predict the shrunk structures of the irradiated MWCNTs is further developed. We also discuss the fabrications of prestressed MWCNTs, in which reduced interwall spacings are desired to enhance the overall elastic modulus and strength. read less NOT USED (high confidence) M. P. Ariza, M. Ortiz, and R. Serrano, “Long-term dynamic stability of discrete dislocations in graphene at finite temperature,” International Journal of Fracture. 2010. link Times cited: 21 NOT USED (high confidence) F. Khademolhosseini, R. Rajapakse, and A. Nojeh, “Torsional buckling of carbon nanotubes based on nonlocal elasticity shell models,” Computational Materials Science. 2010. link Times cited: 104 NOT USED (high confidence) M. Hamdi, A. Subramanian, L. Dong, A. Ferreira, and B. Nelson, “Rotary nanomotors based on head-to-head nanotube shuttles,” 2010 IEEE International Conference on Robotics and Automation. 2010. link Times cited: 1 Abstract: A novel rotary nanomotor is described using two axially alig… read moreAbstract: A novel rotary nanomotor is described using two axially aligned, opposing chirality nanotube shuttles. Based on inter-shell screw-like motion of nanotubes, rotary motion is generated by electrostatically pulling the two cores together. Simulations using molecular dynamics show the generation of rotation from armchair nanotube pairs and their actuation properties. The simulation results, together with recently reported progress in realizing batch-fabricated ultra-high density nanotube shuttles, point towards the use of these motors as building blocks in nanoelectromechanical systems (NEMS) and nanorobotic systems for sensing, actuation, and computation applications. read less NOT USED (high confidence) M. P. Ariza and M. Ortiz, “Discrete dislocations in graphene,” Journal of The Mechanics and Physics of Solids. 2010. link Times cited: 71 NOT USED (high confidence) N. Prodanov and A. Khomenko, “Computational investigation of the temperature influence on the cleavage of a graphite surface,” Surface Science. 2010. link Times cited: 22 NOT USED (high confidence) A. Krasheninnikov and K. Nordlund, “Ion and electron irradiation-induced effects in nanostructured materials,” Journal of Applied Physics. 2010. link Times cited: 877 Abstract: A common misconception is that the irradiation of solids wit… read moreAbstract: A common misconception is that the irradiation of solids with energetic electrons and ions has exclusively detrimental effects on the properties of target materials. In addition to the well-known cases of doping of bulk semiconductors and ion beam nitriding of steels, recent experiments show that irradiation can also have beneficial effects on nanostructured systems. Electron or ion beams may serve as tools to synthesize nanoclusters and nanowires, change their morphology in a controllable manner, and tailor their mechanical, electronic, and even magnetic properties. Harnessing irradiation as a tool for modifying material properties at the nanoscale requires having the full microscopic picture of defect production and annealing in nanotargets. In this article, we review recent progress in the understanding of effects of irradiation on various zero-dimensional and one-dimensional nanoscale systems, such as semiconductor and metal nanoclusters and nanowires, nanotubes, and fullerenes. We also consider the t... read less NOT USED (high confidence) J. Schall, G. Gao, and J. Harrison, “Effects of Adhesion and Transfer Film Formation on the Tribology of Self-Mated DLC Contacts†,” Journal of Physical Chemistry C. 2010. link Times cited: 139 Abstract: Diamond and diamondlike carbon (DLC) films exhibit a wide ra… read moreAbstract: Diamond and diamondlike carbon (DLC) films exhibit a wide range of sometimes contradictory tribological behavior. Experimentally, isolating the influences of factors such as film structure, testing conditions, and environmental effects has proven difficult. In this work, molecular dynamics simulations were used to examine the effects of film structure, passivation, adhesion, tribochemistry, and load on the tribology of self-mated DLC contacts. Addition of hydrogen to a DLC film causes a large decrease in the unsaturated carbon bonds at the interface of the film when compared to both the bulk and non-hydrogenated films. These unsaturated carbon atoms serve as initiation points for the formation of covalent bonds between the counterface and the film. These adhesive interactions cause an increase in friction during sliding. The formation and breaking of covalent bonds during sliding results in the formation of a transfer film. When covalent bonds break, friction decreases and there is a concomitant increase ... read less NOT USED (high confidence) O. Yermolenko, G. V. Kornich, and G. Betz, “Molecular dynamics simulation of sputtering of metal clusters on polyethylene surface,” Bulletin of the Russian Academy of Sciences: Physics. 2010. link Times cited: 2 NOT USED (high confidence) M. T. Knippenberg, P. Mikulski, and J. Harrison, “Effects of tip geometry on interfacial contact forces,” Modelling and Simulation in Materials Science and Engineering. 2010. link Times cited: 15 Abstract: Experimental techniques that utilize atomic force microscopy… read moreAbstract: Experimental techniques that utilize atomic force microscopy are routinely used to examine tribological properties of tip–sample interactions. While analysis of data obtained with these methods provides values for macroscale properties, such as interfacial shear strength, understanding nanoscale properties, such as contact radius, requires an atomic-scale approach. Molecular dynamics simulations provide the ability to numerically analyze the nanoscale origins of a wide-range of material and tribological properties. In this paper, the sliding contact between a self-assembled monolayer (SAM) and two countersurfaces (a nominally flat, amorphous carbon surface and a nearly spherical fullerene tip) is compared. By examining contact forces between the tip and monolayer atoms, large differences in monolayer behavior that occur due to tip geometry can be elucidated. The structure factor reveals that the fullerene tip creates a more disordered monolayer than the amorphous counterface. Friction forces were also studied using the atomic-level contact forces, which show that the depth at which the fullerene tip affects the SAMs substrate is much deeper than the amorphous counterface. The distribution of contact forces that contribute to friction and load were studied and show a difference in behavior between the two countersurfaces. Finally, while there are a large number of atoms that have a non-zero load during sliding, a smaller subset of 32 atoms carries ∼96% of the load. Using this subset of atoms to compute contact radius reveals a greater agreement with the continuum mechanics models than using all atoms with a non-zero load. This paper highlights how computer simulations can yield insight into tribological interactions at the atomic scale. read less NOT USED (high confidence) H. Li and F.-hua Sun, “Nanowires with Unimaginable Characteristics.” 2010. link Times cited: 1 NOT USED (high confidence) Y. Xiao, W. Dong, and H. F. Busnengo, “Reactive force fields for surface chemical reactions: A case study with hydrogen dissociation on Pd surfaces.,” The Journal of chemical physics. 2010. link Times cited: 35 Abstract: An approach based on reactive force fields is applied to the… read moreAbstract: An approach based on reactive force fields is applied to the parametrization of potential energy surface (PES) for chemical reactions on surfaces with a benchmark system, H(2)/Pd(111). We show that a simple reactive force field based on the second moment approximation does not allow for obtaining reliable results of reaction dynamics for the considered system. With a more elaborate reactive force field, i.e., reactive bond order (REBO) force field, we succeeded in obtaining a reliable PES for H(2)/Pd(111). The accuracy of the constructed REBO force field is carefully checked through various tests including the comparison not only between energies calculated with density functional theory and those with REBO force field but also between the available results of ab initio molecular dynamics simulations and those with our force field. Moreover, our REBO force field is endowed with some transferability since the force field constructed with a database containing only information on H(2)/Pd(111) allows for obtaining also accurate results for H(2)/Pd(100) and qualitatively correct results for H(2)/Pd(110) without any refitting. With the help of our reactive force field, the molecular dynamics simulation for the dissociation of H(2) on the considered Pd surfaces is speeded up by five orders of magnitude compared to ab initio molecular dynamics method. The demonstrated reliability and the very high computational efficiency of reactive force fields open extremely attractive perspectives for studying large-scale complex reacting systems. read less NOT USED (high confidence) P. Piotrowski, R. Cannara, G. Gao, J. Urban, R. Carpick, and J. Harrison, “Atomistic Factors Governing Adhesion between Diamond, Amorphous Carbon and Model Diamond Nanocomposite Surfaces,” Journal of Adhesion Science and Technology. 2010. link Times cited: 27 Abstract: Complementary atomic force microscopy (AFM) measurements and… read moreAbstract: Complementary atomic force microscopy (AFM) measurements and molecular dynamics (MD) simulations were conducted to determine the work of adhesion for diamond (C)(111)(1 × 1) and C(001)(2 × 1) surfaces paired with carbon-based materials. While the works of adhesion from experiments and simulations are in reasonable agreement, some differences were identified. Experimentally, the work of adhesion between an amorphous carbon tip and individual C(001)(2 × 1)–H and C(111)(1 × 1)–H surfaces yielded adhesion values that were larger on the C(001)(2 × 1)–H surface. The simulations revealed that the average adhesion between self-mated C(001)(2 × 1) surfaces was smaller than for self-mated C(111)(1 × 1) contacts. Adhesion was reduced when amorphous carbon counterfaces were paired with both types of diamond surfaces. Pairing model diamond nanocomposite surfaces with the C(111)(1 × 1)–H sample resulted in even larger reductions in adhesion. These results point to the importance of atomic-scale roughness for adhesion. The simulated adhesion also shows a modest dependence on hydrogen coverage. Density functional theory calculations revealed small, C–H bond dipoles on both diamond samples, with the C(001)(2 × 1)–H surface having the larger dipole, but having a smaller dipole moment per unit area. Thus, charge separation at the surface is another possible source of the difference between the measured and calculated works of adhesion. read less NOT USED (high confidence) P. P. Pampanelli, J. P. Peçanha, A. M. Campos, M. Vieira, M. Lobosco, and S. Dantas, “Rectangular Hexagonal Mesh Generation for Parametric Modeling,” 2009 XXII Brazilian Symposium on Computer Graphics and Image Processing. 2009. link Times cited: 3 Abstract: This paper addresses the problem of rectangular hexagonal me… read moreAbstract: This paper addresses the problem of rectangular hexagonal mesh generation for surface modeling. Hexagonal grids are important for several applications such as the simulation of carbon nanostructures. A fast and accurate method to obtain a rectangular region over a hexagonal grid is proposed. Strips of hexagons defined by the Hamada indexes are constructed and stacked using a variation of the Bresenham's algorithm. The final hexagonal mesh is tessellated using half-edges in order to be suitable for several operations and simulation processes. This mesh can be used as a parameter space for obtaining different geometric models. Experimental results show that arbitrarily large meshes are generated fast. The enumeration of rectangular regions with high number of hexagons is accurate despite its dimensions. An evaluation of the method under several circumstances is presented indicating its high performance for the generation of a high number of hexagons. read less NOT USED (high confidence) X. Wang, H. Liu, J. Wang, W. Zhang, and Z. Li, “Package heat dissipation with integrated carbon nanotube micro heat sink,” 2009 International Conference on Electronic Packaging Technology & High Density Packaging. 2009. link Times cited: 6 Abstract: Micro-channel cooler is a very promising approach to meet th… read moreAbstract: Micro-channel cooler is a very promising approach to meet the requirements of microelectronics package cooling. A lot of investigations about micro-channels have been undertaken in the past years. A silicon micro-channel can remove 790W/cm2 heat with a temperature rise of 71 degrees between the substrate and the coolant. The width and height of the silicon channel are 50um and 302um separately [1]. However, as the trends in the electronics industry moves towards higher packaging density, the high-pressure drop problem limits the performance of traditional silicon heat sink. Replacing the silicon fins with nanotube fins to enhance the thermal exchange rate between cooling liquid and substrate is one way to overcome this problem. Growing aligned nanotubes on the whole substrate is another one [2]. Carbon nanotubes (CNTs) are a new form of carbon which was discovered in 1991 by Iijima [3]. CNTs can be grown directly on the surface of silicon accurately according to predefined small-scale catalyst patterns normally transferred by standard photolithography processes. It was reported that nanotubes have an extremely high thermal conductivity over 3000W/(km) [4], so in the present work, the thermo physical properties of CNTs are obtained via molecular dynamics (MD) method. Fig.1 shows one single-wall CNT simulation by LAMMPS. Several CNTs-fin heat sinks (1cm∗1cm) with different fin width varied from 2um to 200um are tested (Fig.2). Then the aligned CNTs heat sink is also simulated to compare with the long CNTs-fin model. The heat transfer coefficients and pressure drop of these structures are computed. Results indicate replacing the silicon-fin with CNTs-fin is a promising method and the long CNT-fin model shows better performance than the aligned CNTs for generating little pressure drop. Among the models, the best one is chosen for experiments in next work. read less NOT USED (high confidence) Z. Wang and R. Scharstein, “Electrostatics of graphene: Charge distribution and capacitance,” Chemical Physics Letters. 2009. link Times cited: 41 NOT USED (high confidence) Z. Wang, “Alignment of graphene nanoribbons by an electric-field,” arXiv: Mesoscale and Nanoscale Physics. 2009. link Times cited: 159 NOT USED (high confidence) R. Paruch, L. Rzeznik, B. Czerwinski, B. Garrison, N. Winograd, and Z. Postawa, “Sputtering of Langmuir–Blodgett multilayers by keV C60 projectiles as seen by computer simulations,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2009. link Times cited: 3 NOT USED (high confidence) J. Quenneville and T. Germann, “A quantum chemistry study of Diels-Alder dimerizations in benzene and anthracene.,” The Journal of chemical physics. 2009. link Times cited: 16 Abstract: There is considerable experimental evidence of covalent dime… read moreAbstract: There is considerable experimental evidence of covalent dimerization of aromatic compounds occurring under shock conditions. Because of their endothermicity, these reactions could play a large role in the shock initiation process of aromatic molecular explosives such as 2,4,6-trinitrotoluene and 1,3,5-triamino-2,4,6-trinitrobenzene by withdrawing energy from the shock compression. Very little is known about the energetics, however, and this knowledge is crucial for the design of empirical force fields that can treat shock-induced chemistry. We have employed ab initio electronic structure and density functional methods to study the Diels-Alder (DA) dimerizations of benzene and anthracene. The enthalpy of reaction for DA benzene dimerization is predicted to be +35.9 kcal/mol. The stepwise pathway to this dimer involves formation of a stable triplet intermediate that requires 71.8 kcal/mol of energy. Transition states along both the concerted and stepwise pathways were optimized and the energetics of the reaction pathways are detailed. The former is found to be the energetically preferred mechanism. Nine DA dimers of anthracene were found, with six predicted to have dimerization DeltaH(rxn)'s of 24-55 kcal/mol, two with dimerization energies near zero and one that is formed through an exothermic reaction. Twelve triplet dimers of anthracene, with DeltaH(rxn)'s ranging from 33-50 kcal/mol, are also described. Finally, the potential importance of these reactions in the context of shock compression of these materials is discussed. read less NOT USED (high confidence) J. Végh and D. Graves, “Molecular Dynamics Simulations of Ar+–Organic Polymer Interactions,” Plasma Processes and Polymers. 2009. link Times cited: 16 Abstract: MD simulations of ion―organic styrene-containing polymer int… read moreAbstract: MD simulations of ion―organic styrene-containing polymer interactions are reviewed and compared to experiment. We report results for argon ion bombardment of PS, PαMS and P4MS. All three polymers exhibit the formation of a similar, highly cross-linking, dehydrogenated near-surface damaged layer at steady state, but small changes in the structure of the polymer (P4MS and PαMS are isomers) can lead to drastic changes in the initial transient sputtering of the material. We correlate this behavior to differences in radiation chemistry (P4MS and PS are cross-linking while PaMS is a chain scission polymer), and examine how the behavior in MD may relate to larger-scale experimental results, such as roughness formation. read less NOT USED (high confidence) A. Henry and G. Chen, “Explicit Treatment of Hydrogen Atoms in Thermal Simulations of Polyethylene,” Nanoscale and Microscale Thermophysical Engineering. 2009. link Times cited: 13 Abstract: Most atomistic simulation studies of polyethylene employ a u… read moreAbstract: Most atomistic simulation studies of polyethylene employ a united-atom representation to reduce complexity and computational costs. The ramifications of such an approximation have been discussed with respect to structural properties but have not been examined with respect to thermal properties. Here we investigate the consequences of simplified united-atom representations by comparing results from the Kirkwood model to molecular dynamics simulations and lattice dynamics calculations based on a more recent potential, which treats all atoms explicitly. Our results indicate that an explicit treatment of all degrees of freedom is necessary and that significant errors can arise if united-atom approaches are used. read less NOT USED (high confidence) L. Rzeznik, B. Czerwinski, R. Paruch, B. Garrison, and Z. Postawa, “Sputtering of thin benzene films by large noble gas clusters,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2009. link Times cited: 6 NOT USED (high confidence) M. C. Wu and J. Hsu, “Thermal conductivity of carbon nanotubes with quantum correction via heat capacity,” Nanotechnology. 2009. link Times cited: 27 Abstract: The molecular dynamics simulation with the use of the empiri… read moreAbstract: The molecular dynamics simulation with the use of the empirical Tersoff potential is applied to study the thermal characteristics of carbon nanotubes (CNTs). A thermal reservoir is devised to control the temperature and to exact the heat flux input. The quantum effect defining the precise temperature from the absolute zero Kelvin and up is included by applying phonon (boson) statistics to the specific heat. At low temperature, the CNT thermal conductivity increases with increasing temperature. After reaching its peak, which is limited by the length of the CNT, it decreases with temperature due to phonon–phonon interactions. The scaling law of thermal conductivity as a function of temperature and length is inferred from the simulation results, allowing prediction for CNTs of much longer length beyond what MD could simulate. read less NOT USED (high confidence) T. Kumagai, S. Hara, J. Choi, S. Izumi, and T. Kato, “Development of empirical bond-order-type interatomic potential for amorphous carbon structures,” Journal of Applied Physics. 2009. link Times cited: 21 Abstract: A bond-order-type interatomic potential has been developed f… read moreAbstract: A bond-order-type interatomic potential has been developed for reproducing amorphous carbon (a-C) structures. Several improvements have been incorporated into the conventional Brenner potential so that the material properties of carbon crystals remain unchanged. The main characteristics of the potential function developed in the present research are the use of a screening function instead of a cutoff function and the introduction of a dihedral angle potential around the bond between two threefold coordinated atoms. By using the developed interatomic potential, we can reproduce the material properties of a-C structures, such as the fraction of sp3-bonded atoms, radial distribution function, and ring statistics. It is found that the correction term enhances the formation of cluster structures in a-C, which is confirmed in the first-principles calculation. read less NOT USED (high confidence) Y. Zheng, S. K. Pregler, J. Myers, J. Ouyang, S. Sinnott, and J. Xue, “Computational and experimental studies of phase separation in pentacene:C60 mixtures,” Journal of Vacuum Science & Technology B. 2009. link Times cited: 22 Abstract: Phase separation in molecular donor-acceptor mixtures compos… read moreAbstract: Phase separation in molecular donor-acceptor mixtures composed of pentacene and C60 is examined using a combination of computational and experimental methods. Classical molecular dynamics simulations of the relaxation process of pentacene:C60 mixtures predict the formation of pentacene stacks and C60 clusters in the equilibrated structures. These findings are consistent with experimental observations, where x-ray diffraction and atomic force microscopy characterization of the mixed films confirm the existence of polycrystalline pentacene domains. The scanning electron and atomic force micrographs of mixed films deposited at different rates as well as with various mixing ratios show that the aggregation of pentacene, and therefore the degree of phase separation in the mixtures, can be manipulated by the processing conditions. Finally, bulk heterojunction photovoltaic devices using different pentacene:C60 mixtures as an active layer are fabricated and their photovoltaic performance characteristics are compa... read less NOT USED (high confidence) L. Rzeznik, B. Czerwinski, B. Garrison, N. Winograd, and Z. Postawa, “Molecular dynamics simulations of sputtering of organic overlayers by slow, large clusters,” Applied Surface Science. 2008. link Times cited: 13 NOT USED (high confidence) M. T. Knippenberg, P. Mikulski, B. Dunlap, and J. Harrison, “Atomic contributions to friction and load for tip-self-assembled monolayers interactions,” Physical Review B. 2008. link Times cited: 26 Abstract: Scanning force microscopies SFM are being routinely used to … read moreAbstract: Scanning force microscopies SFM are being routinely used to examine the mechanical and tribological properties of materials with the goal of obtaining information, such as Young’s Moduli and shear strengths from the experimental data Unertl, J. Vac. Sci. Technol. A 17, 1779 1999. Analysis of data obtained from an SFM experiment typically requires the use of continuum mechanics models to extract materials properties. When applying these models care must be taken to ensure that the experimental conditions meet the requirements of the model being applied. For example, despite many successful applications of the Johnson-KendallRoberts JKR model to SFM data, it does not take into account the presence of a compliant layer on the sample surface. Recent AFM experiments that examined the friction of self-assembled monolayers SAMs have confirmed that friction versus load data cannot be fit by the JKR model. The authors suggest that the penetration of the SAM by the tip gives rise to an additional contribution to friction due to “plowing” Flater et al., Langmuir 23, 9242 2007. Herein, molecular-dynamics simulations are used to study atomic contact forces between a spherical tip in sliding contact with a SAM. These simulations show that different regions around the tip contribute in unanticipated ways to the total friction between the tip and the monolayer and allow for the number and location of monolayer atoms contributing friction to be determined. The use of atomic contact forces within the monolayer, instead of forces on the rigid tip layers, allows for the contributions to friction force and load to be deconvoluted into forces that resist repel and assist attract tip motion. The findings presented here yield insight into the AFM experiments of SAMs and may have important consequences for the adaptation of continuum contact models for the contact between a sphere and surface where penetration into the sample is possible. read less NOT USED (high confidence) M. Buehler, S. Keten, and T. Ackbarow, “Theoretical and computational hierarchical nanomechanics of protein materials: Deformation and fracture,” Progress in Materials Science. 2008. link Times cited: 179 NOT USED (high confidence) M. Lísal, P. Cosoli, W. Smith, S. Jain, and K. Gubbins, “Molecular-level simulations of chemical reaction equilibrium for nitric oxide dimerization reaction in disordered nanoporous carbons,” Fluid Phase Equilibria. 2008. link Times cited: 14 NOT USED (high confidence) H. Amara, J. Roussel, C. Bichara, J. Gaspard, and F. Ducastelle, “Tight-binding potential for atomistic simulations of carbon interacting with transition metals: Application to the Ni-C system,” Physical Review B. 2008. link Times cited: 95 Abstract: We present a tight-binding potential for transition metals, … read moreAbstract: We present a tight-binding potential for transition metals, carbon, and transition-metal carbides, which has been optimized through a systematic fitting procedure. A minimal basis, including the s and p electrons of carbon and the d electrons of the transition metal, is used to obtain a transferable tight-binding model of the carbon-carbon, metal-metal, and metal-carbon interactions applicable to binary systems. The Ni-C system is more specifically discussed. The successful validation of the potential for different atomic configurations indicates a good transferability of the model and makes it a good choice for atomistic simulations sampling a large configuration space. This approach appears to be very efficient to describe interactions in systems containing carbon and transition-metal elements. By way of example, we present results concerning the epitaxial growth of graphene sheets on (111) Ni surfaces, as well as the catalytic nucleation of carbon nanotubes. read less NOT USED (high confidence) T. Lu, E. Goldfield, and S. Gray, “Classical Trajectory Studies of the D + H2 → HD + H Reaction Confined in Carbon Nanotubes: Parallel Trajectories,” Journal of Physical Chemistry C. 2008. link Times cited: 7 Abstract: We use full-dimensional classical trajectories to study how … read moreAbstract: We use full-dimensional classical trajectories to study how reaction probabilities for the D + H2 → DH + H reaction are altered when the system is confined to move within various-sized carbon nanotubes (CNTs). This study focuses on D atoms initially moving parallel to the long axis of the tube. We compare our results with standard gas-phase reaction probabilities. Enhanced reaction probabilities are found for the smaller diameter CNTs, and slight quenching is found for the largest diameter CNT studied. These results are also consistent with those of a reduced-dimensional, quantum study. The origins of the confinement effects are discussed in terms of how the CNT modifies the H2 reactant state and of the modified forces experienced by the incoming D atom. read less NOT USED (high confidence) C. Sanz-Navarro et al., “Molecular Dynamics Simulations of Carbon-Supported Ni Clusters Using the Reax Reactive Force Field,” Journal of Physical Chemistry C. 2008. link Times cited: 30 Abstract: Molecular dynamics simulations have been performed using a R… read moreAbstract: Molecular dynamics simulations have been performed using a Reax force field for C/H/Ni systems to study the structural changes of an Ni_(100) cluster adsorbed on a carbon platelet. Three different edges of a carbon platelet are considered. We find a complete restructuring of the initial structure of the Ni_(100) clusters adsorbed on the armchair and zigzag edges. Nonetheless, the mean Ni−Ni bond length hardly changes. Several preferential sites on each of the graphite edges are identified. Diffusion of the entire cluster is found both for adsorption on the basal plane and for binding to a hydrogen terminated graphite edge. read less NOT USED (high confidence) J. Harrison, J. Schall, M. T. Knippenberg, G. Gao, and P. Mikulski, “Elucidating atomic-scale friction using molecular dynamics and specialized analysis techniques,” Journal of Physics: Condensed Matter. 2008. link Times cited: 51 Abstract: Because all quantities associated with a given atom are know… read moreAbstract: Because all quantities associated with a given atom are known as a function of time, molecular dynamics simulations can provide unparalleled insight into dynamic processes. Many quantities calculated from simulations can be directly compared to experimental values, while others provide information not available from experiment. For example, the tilt and methyl angles of chains within a self-assembled monolayer and the amount of hydrogen in a diamond-like carbon (DLC) film are measurable in an experiment. In contrast, the atomic contact force on a single substrate atom, i.e., the force on that atom due to the tip atoms only, and the changes in hybridization of a carbon atom within a DLC film during sliding are not quantities that are currently obtainable from experiments. Herein, the computation of many quantities, including the ones discussed above, and the unique insights that they provided into compression, friction, and wear are discussed. read less NOT USED (high confidence) D. Majure et al., “Large-Scale Atomic/Molecular Massively Parallel Simulator (LAMMPS) Simulations of the Effects of Chirality and Diameter on the Pullout Force in a Carbon Nanotube Bundle,” 2008 DoD HPCMP Users Group Conference. 2008. link Times cited: 29 Abstract: The unique mechanical, electrical, and thermal properties of… read moreAbstract: The unique mechanical, electrical, and thermal properties of carbon nanotube (CNT) molecules place them at the forefront of nanotechnology. The mechanical properties of carbon nanotubes such as high tensile strength and modulus provide an effective pathway for better construction materials. Before this potential can be realized, effective techniques of creating load transfer in bulk material must be developed. Carbon nanotubes possess a variety of chiralities and diameters and can cluster into self-organizing, aligned bundles caused by van der Waals (vdW) forces. This paper describes the results of molecular mechanics simulations using the large-scale atomic/molecular massively parallel simulator (LAMMPS) molecular dynamics code to examine the effect that chirality and diameter have on the pullout force of a single tube from a bundle with hexagonal closest packing (HCP). Pullout force is defined as the force required to extract a tube from a bundle. The different chiralities and diameters create different corrugated surfaces and different areas of contact that influence pullout force. Studying the interaction between CNTs is essential for improving the fundamental understanding of load transfer from CNT to CNT. Additionally, since larger diameter CNTs deform against one another in a bundle, the relationship between diameter and pullout force is quantified in this paper. This research will be used as a basis for studying more advanced load transfer techniques such as twisting, sidewall functionalization, and knotting. read less NOT USED (high confidence) B. Garrison and Z. Postawa, “Computational view of surface based organic mass spectrometry.,” Mass spectrometry reviews. 2008. link Times cited: 125 Abstract: Surface based mass spectrometric approaches fill an importan… read moreAbstract: Surface based mass spectrometric approaches fill an important niche in the mass analysis portfolio of tools. The particular niche depends on both the underlying physics and chemistry of molecule ejection as well as experimental characteristics. In this article, we use molecular dynamics computer simulations to elucidate the fundamental processes giving rise to ejection of organic molecules in atomic and cluster secondary ion mass spectrometry (SIMS), massive cluster impact (MCI) mass spectrometry, and matrix-assisted laser desorption ionization (MALDI) mass spectrometry. This review is aimed at graduate students and experimental researchers. read less NOT USED (high confidence) I. Szlufarska, M. Chandross, and R. Carpick, “Recent advances in single-asperity nanotribology,” Journal of Physics D: Applied Physics. 2008. link Times cited: 407 Abstract: As the size of electronic and mechanical devices shrinks to … read moreAbstract: As the size of electronic and mechanical devices shrinks to the nanometre regime, performance begins to be dominated by surface forces. For example, friction, wear and adhesion are known to be central challenges in the design of reliable micro- and nano-electromechanical systems (MEMS/NEMS). Because of the complexity of the physical and chemical mechanisms underlying atomic-level tribology, it is still not possible to accurately and reliably predict the response when two surfaces come into contact at the nanoscale. Fundamental scientific studies are the means by which these insights may be gained. We review recent advances in the experimental, theoretical and computational studies of nanotribology. In particular, we focus on the latest developments in atomic force microscopy and molecular dynamics simulations and their application to the study of single-asperity contact. read less NOT USED (high confidence) Y. Shi, “A mimetic porous carbon model by quench molecular dynamics simulation.,” The Journal of chemical physics. 2008. link Times cited: 65 Abstract: A mimetic porous carbon model is generated using quench mole… read moreAbstract: A mimetic porous carbon model is generated using quench molecular dynamics simulations that reproduces experimental radial distribution functions of activated carbon. The resulting structure is composed of curved and defected graphene sheets. The curvature is induced by nonhexagonal rings. The quench conditions are systematically varied and the final porous structure is scrutinized in terms of its pore size distribution, pore connectivity, and fractal dimension. It is found that the initial carbon density affects the fractal dimension but only causes a minor shift in the pore size distribution. On the other hand, the quench rate affects the pore size distribution but only causes a minor shift in the fractal dimension. read less NOT USED (high confidence) M. J. Brukman, G. Gao, R. Nemanich, and J. Harrison, “Temperature Dependence of Single-Asperity Diamond−Diamond Friction Elucidated Using AFM and MD Simulations,” Journal of Physical Chemistry C. 2008. link Times cited: 46 Abstract: Complementary experimental (atomic force microscopy) and the… read moreAbstract: Complementary experimental (atomic force microscopy) and theoretical (molecular dynamics) techniques were used to investigate friction between diamond−diamond junctions as a function of temperature. The simulation and experimental conditions were designed to correspond as closely as possible. In the atomic force microscopy (AFM) experiments, two microcrystalline-diamond (μCD) AFM tips of differing contact radii were used to examine the friction of diamond (111) and (001) single crystals from 24 to 225 K in an ultrahigh vacuum. At all temperatures, the experimentally determined dependence of friction on load was consistent with the occurrence of single-asperity interfacial friction, where friction is proportional to contact area. In addition, the behavior of the contact was fit well by the Derjaguin−Muller−Toporov continuum model. Friction measurements within a given series were highly repeatable; however, as is typical with AFM measurements, there was some variation in measurements taken from different re... read less NOT USED (high confidence) J. Harrison, G. Gao, J. Schall, M. T. Knippenberg, and P. Mikulski, “Friction between solids,” Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences. 2008. link Times cited: 33 Abstract: The theoretical examination of the friction between solids i… read moreAbstract: The theoretical examination of the friction between solids is discussed with a focus on self-assembled monolayers, carbon-containing materials and antiwear additives. Important findings are illustrated by describing examples where simulations have complemented experimental work by providing a deeper understanding of the molecular origins of friction. Most of the work discussed herein makes use of classical molecular dynamics (MD) simulations. Of course, classical MD is not the only theoretical tool available to study friction. In view of that, a brief review of the early models of friction is also given. It should be noted that some topics related to the friction between solids, i.e. theory of electronic friction, are not discussed here but will be discussed in a subsequent review. read less NOT USED (high confidence) L. Ghiringhelli, C. Valeriani, J. H. Los, E. Meijer, A. Fasolino, and D. Frenkel, “State-of-the-art models for the phase diagram of carbon and diamond nucleation,” Molecular Physics. 2008. link Times cited: 52 Abstract: We review recent developments in the modelling of the phase … read moreAbstract: We review recent developments in the modelling of the phase diagram and the kinetics of crystallization of carbon. In particular, we show that a particular class of bond-order potentials (the so-called LCBOP models) account well for many of the known structural and thermodynamic properties of carbon at high pressures and temperatures. We discuss the LCBOP models in some detail. In addition, we briefly review the ‘history’ of experimental and theoretical studies of the phase behaviour of carbon. Using a well-tested version of the LCBOP model (viz. LCBOPI+) we address some of the more controversial hypotheses concerning the phase behaviour of carbon, in particular: the suggestion that liquid carbon can exist in two phases separated by a first-order phase transition and the conjecture that diamonds could have formed by homogeneous nucleation in Uranus and Neptune. read less NOT USED (high confidence) J. Kermode, “Multiscale hybrid simulation of brittle fracture.” 2008. link Times cited: 5 NOT USED (high confidence) F. Mota, E. F. A. Júnior, and C. D. Castilho, “How can encapsulated C60 fullerenes escape from a carbon nanotube?: A molecular dynamics simulation answer,” Brazilian Journal of Physics. 2008. link Times cited: 3 Abstract: This work aim is to determine how a C60 fullerene, encapsula… read moreAbstract: This work aim is to determine how a C60 fullerene, encapsulated into a (10,10) carbon nanotube, can be ballistically expelled from it by using a colliding capsule. Initially, the C60 fullerene is positioned at rest inside the nanotube. The capsule, also starting from rest but outside of the nanotube, is put in a position such that it can be trapped towards the interior of the nanotube by attraction forces between their atoms. The energy gain associated to the capsule penetration is kinetic energy, giving rise to a high velocity for it. When the capsule reaches the C60 fullerene, it transfers energy to it in an amount that enables the fullerene to escape from the nanotube. The mechanical behavior was simulated by classical molecular dynamics. The intermolecular interactions are described by a van der Waals potential while the intramolecular interactions are described by an empirical Tersoff-Brenner potential for the carbon system. read less NOT USED (high confidence) A. Liu and S. Stuart, “Empirical bond‐order potential for hydrocarbons: Adaptive treatment of van der Waals interactions,” Journal of Computational Chemistry. 2008. link Times cited: 31 Abstract: Bond‐order potentials provide a powerful class of models for… read moreAbstract: Bond‐order potentials provide a powerful class of models for simulating chemically reactive systems with classical potentials. In these models, the covalent bonding interactions adapt to the environment, allowing bond strength to change in response to local chemical changes. However, the non‐bonded interactions should also adapt in response to chemical changes, an effect which is neglected in current bond‐order potentials. Here the AIREBO potential is extended to include adaptive Lennard‐Jones terms, allowing the van der Waals interactions to vary adaptively with the chemical environment. The resulting potential energy surface and its gradient remain continuous, allowing it to be used for dynamics simulations. This new potential is parameterized for hydrocarbons, and is fit to the energetics and densities of a variety of condensed phase molecular hydrocarbons. The resulting model is more accurate for modeling aromatic and other unsaturated hydrocarbon species, for which the original AIREBO potential had some deficiencies. Testing on compounds not used in the fitting procedure shows that the new model performs substantially better in predicting heats of vaporization and pressures (or densities) of condensed‐phase molecular hydrocarbons. © 2007 Wiley Periodicals, Inc. J Comput Chem, 2008 read less NOT USED (high confidence) M. T. Knippenberg, S. Stuart, and H. Cheng, “Molecular dynamics simulations on hydrogen adsorption in finite single walled carbon nanotube bundles,” Journal of Molecular Modeling. 2008. link Times cited: 16 NOT USED (high confidence) C. H. Turner, J. Brennan, M. Lísal, W. Smith, J. K. Johnson, and K. Gubbins, “Simulation of chemical reaction equilibria by the reaction ensemble Monte Carlo method: a review†,” Molecular Simulation. 2008. link Times cited: 96 Abstract: Understanding and predicting the equilibrium behaviour of ch… read moreAbstract: Understanding and predicting the equilibrium behaviour of chemically reacting systems in highly non-ideal environments is critical to many fields of science and technology, including solvation, nanoporous materials, catalyst design, combustion and propulsion science, shock physics and many more. A method with recent success in predicting the equilibrium behaviour of reactions under non-ideal conditions is the reaction ensemble Monte Carlo method (RxMC). RxMC has been applied to reactions confined in porous solids or near solid surfaces, reactions at high temperature and/or high pressure, reactions in solution and at phase interfaces. The only required information is a description of the intermolecular forces among the system molecules and standard free-energy data for the reacting components. Extensions of the original method include its combination with algorithms for systems involving phase equilibria, constant-enthalpy and constant-internal energy adiabatic conditions, a method to include reaction kinetics, a method to study the dynamics of reacting systems, and a mesoscale method to simulate long-chain molecule phase separation. This manuscript surveys the various applications and adaptations of the RxMC method to date. Additionally, the relationship between the RxMC method and other techniques that simulate chemical reaction behaviour is given, along with insight into some technical nuances not found in the pioneering papers. read less NOT USED (high confidence) H. Yasumatsu, Y. Yamaguchi, and T. Kondow, “Ejection of clusters from solid surface by impact of size-selected cluster ion,” Molecular Physics. 2008. link Times cited: 5 Abstract: Ejection of clusters from a solid surface by impact of size-… read moreAbstract: Ejection of clusters from a solid surface by impact of size-selected clusters was investigated by mass spectroscopy and molecular dynamics (MD) simulation. It was found experimentally that carbon cluster anions, (m = 1–12), are ejected from a graphite surface by impact of (N = 1–25) at collision energies (E col) of 0.2–14.0 keV per CO2 molecule. A yield, η, of the carbon-atom ejection in the form of C m − was measured to increase with the 4th power of E col as well as the 3.6th power of N, that is, η∼N 3.6 , and levels off as E col increases further. The size distribution of the ejected remains unchanged with E col, while the average size, ⟨m⟩, of increases in proportion to N 0.17. On the other hand, MD simulation showed that C m are produced by recombination of carbon atoms evaporated from a hot surface of a cylindrical crater-shaped defect temporarily formed on the graphite surface by the cluster impact. The E col and N dependences of η and ⟨m⟩ were explained by a thermal desorption model parameterized using the results of the MD simulation. It was concluded that the higher efficiency of the cluster ejection by the larger cluster impact is attained in terms of efficient energy localization in a larger surface area and in a shallower region due to the instantaneous energy deposition by the cluster impact and the fragile nature of graphene sheets. read less NOT USED (high confidence) T. Roussel, A. Didion, R. Pellenq, R. Gadiou, C. Bichara, and C. Vix‐Guterl, “Experimental and Atomistic Simulation Study of the Structural and Adsorption Properties of Faujasite Zeolite−Templated Nanostructured Carbon Materials†,” Journal of Physical Chemistry C. 2007. link Times cited: 51 Abstract: Nanostructured carbon materials were obtained by templating … read moreAbstract: Nanostructured carbon materials were obtained by templating faujasite zeolites. This was achieved by liquid infiltration of furfuryl alcool and chemical vapor deposition of propylene and acetonitrile. These carbon materials were characterized by adsorption of gaseous nitrogen and carbon dioxide, and the carbon structure was investigated by X-ray diffraction (XRD). They exhibit a very large pore volume in the micropore region (i.e., narrower than 2 nm), and the XRD spectra show the presence of a nanostructured carbon material with a well-defined unit cell whose size and symmetry are imposed by the zeolite template. We made use of Grand Canonical Monte Carlo simulation of carbon adsorption in order to obtain numerical models of such materials and study their texture and mechanical and adsorption properties on an atomistic scale. The carbon−carbon interactions were modeled within the frame of the tight binding and the reactive bond order (REBO) formalisms, while carbon−zeolite interactions were assumed to be... read less NOT USED (high confidence) Y. Shi and D. Brenner, “Simulated thermal decomposition and detonation of nitrogen cubane by molecular dynamics.,” The Journal of chemical physics. 2007. link Times cited: 18 Abstract: We present simulations of a model molecular solid of nitroge… read moreAbstract: We present simulations of a model molecular solid of nitrogen cubane subject to thermal agitation and mechanical shock. A new approach, a reactive state summation potential, has been used to model nitrogen cubane dissociation. At elevated temperatures, the system decomposes to N(2) mixed with a small amount of oligomeric nitrogen. When subject to shock loading the system detonates above some critical threshold after which a shock front is self-sustained by the energy release from chemical reactions at a constant intrinsic speed. This is the first example of a fully three-dimensional atomic simulation of a chemically-sustained detonation. The spatial confinement of the shock front results in longer chain intermediates than in the case of thermal decomposition, suggesting that shock intermediates can be structurally very different from the same material subject to comparable temperatures and pressures. read less NOT USED (high confidence) J. E. Goose and P. Clancy, “Exploring the Energetic Deposition of Pentacene on Pentacene through Molecular Dynamics Simulations,” Journal of Physical Chemistry C. 2007. link Times cited: 22 Abstract: We use molecular dynamics simulations to explore in detail t… read moreAbstract: We use molecular dynamics simulations to explore in detail the factors affecting the behavior of an incident pentacene molecule colliding with the pentacene (010) step edge. We examine the effect of molecular orientation in conjunction with incident kinetic energy (Ei) and angle (θi) of the incoming molecule and proximity of the collision of the incoming molecule to the step edge in determining the relative contributions of fundamental mechanisms such as insertion, ejection, and interlayer transport. We find that to maximize 2D growth through experimentally controllable parameters, Ei and θi, the molecular orientation within the beam must be controlled. For θi = 0°, when the momentum of the incident molecule is aligned along the long axis of the molecule, downward interlayer transport of the incident molecule is dominant for all hyperthermal energies. When the molecular orientation is random, higher energies must be employed to achieve the same degree of downward interlayer transport. For nonzero values o... read less NOT USED (high confidence) K. E. Ryan, I. A. Wojciechowski, and B. Garrison, “Reaction dynamics following keV cluster bombardment,” Journal of Physical Chemistry C. 2007. link Times cited: 25 Abstract: The nature of the regions that are favorable for chemical re… read moreAbstract: The nature of the regions that are favorable for chemical reactions has been investigated for a pure amorphous water ice substrate following energetic bombardment by C60 and Au3 cluster projectiles using molecular dynamics (MD) simulations. The simulations show that both projectiles, especially C60, produce regions where a plethora of reactions occur at elevated densities indicating that multiple atoms or molecules are involved simultaneously in the reactions initiated by cluster bombardment. The total number of reacted water molecules is significantly less than the total sputtering yield, which confirms that both cluster projectiles are useful for molecular depth profiling experiments. read less NOT USED (high confidence) P. Krstic, C. Reinhold, and S. Stuart, “Chemical sputtering from amorphous carbon under bombardment by deuterium atoms and molecules,” New Journal of Physics. 2007. link Times cited: 46 Abstract: We perform classical molecular dynamics simulations of the c… read moreAbstract: We perform classical molecular dynamics simulations of the chemical sputtering of deuterated amorphous carbon surfaces by D and D2, at energies of 7.5–30 eV D−1. Particular attention is paid to the preparation of the target surfaces for varying impact projectile fluence, energy and species, to the vibrational state of D2 projectiles, as well as to the variation in sputtering yields with target surface and impact projectile. The methane and acetylene sputtering yields per deuteron, obtained with atomic and molecular projectiles, agree quantitatively with recent experimental values. We study the distribution of sputtered species, as well as their kinetic energy and angular spectra. read less NOT USED (high confidence) B. Czerwinski et al., “Organic mass spectrometry with low-energy projectiles,” Vacuum. 2007. link Times cited: 2 NOT USED (high confidence) H. Duan et al., “Initial growth of single-walled carbon
nanotubes on supported iron clusters: a molecular dynamics
study,” The European Physical Journal D. 2007. link Times cited: 10 NOT USED (high confidence) N. Mosey and M. Müser, “Atomistic Modeling of Friction.” 2007. link Times cited: 7 Abstract: Friction is a well-known, but poorly understood, phenomenon … read moreAbstract: Friction is a well-known, but poorly understood, phenomenon that affects virtually all aspects of daily life. In some cases, friction is desirable, e.g., high friction in clutches leads to the effective transmission of forces between an automobile’s engine and its wheels, while in other cases friction is a significant drawback, e.g., friction between the piston and cylinder wall decreases the efficiency of automobile engines. Although macroscopic friction laws were introduced a few centuries ago,1 and the existence of friction was recognized long before that, the underlying atomic-level mechanisms leading to friction have remained elusive. The identification of these mechanisms has emerged as a topic of significant interest, which has been driven by the miniaturization of mechanical devices, the peculiar behavior of condensed matter at the nanoscale, and advances in simulating chemically complex lubricants and surfaces with ever-increasing accuracy.2–4 Although a great deal of research has been directed towards elucidating the fundamental, atomic-level origins of friction in recent years, many key questions remain unanswered. Atomic-level simulation has been used extensively in the study of friction, not simply as a means of supplementing experimental studies, but as a powerful tool for gaining unique insight into the relevant processes. Indeed, simulations allow one to study well-defined systems under a variety of conditions that may be difficult, or even impossible, to examine in real laboratory experiments. As such, simulations have shed much-needed light on fundamental aspects of friction, and in some cases have even overturned conventional wisdom regarding the origins of friction. In this chapter, read less NOT USED (high confidence) J. Marian et al., “Characterization of sputtering products during graphite exposure to deuterium ions by molecular dynamics,” Journal of Applied Physics. 2007. link Times cited: 26 Abstract: We study sputtering by 100eV deuterium irradiation on deuter… read moreAbstract: We study sputtering by 100eV deuterium irradiation on deuterated amorphous carbon layers at 300K using molecular dynamics (MD) simulations. Two main results are reported here. First, a special mechanism for carbon release—additional to and distinct from the standard definitions for physical and chemical sputtering of carbon by hydrogen isotopes—has been identified and quantified. This process, here termed ion induced release of unsaturated hydrocarbons (IRUH’s), is primarily due to a recently identified atomic collision process where momentum from an impacting particle is transferred approximately perpendicular to the C–C bond, severing it. For the prescribed conditions, the IRUH yield has been found to be comparable to that of standard physical and chemical sputtering, the former being also consistently and simultaneously calculated here. IRUH release of single C atoms does not involve any hydrogenic chemistry and is therefore properly considered to be a distinct and additive type of physical sputtering ... read less NOT USED (high confidence) M. Lísal, J. Brennan, and W. Smith, “Mesoscale simulation of polymer reaction equilibrium: combining dissipative particle dynamics with reaction ensemble Monte Carlo. I. Polydispersed polymer systems.,” The Journal of chemical physics. 2006. link Times cited: 52 Abstract: We present a mesoscale simulation technique, called the reac… read moreAbstract: We present a mesoscale simulation technique, called the reaction ensemble dissipative particle dynamics (RxDPD) method, for studying reaction equilibrium of polymer systems. The RxDPD method combines elements of dissipative particle dynamics (DPD) and reaction ensemble Monte Carlo (RxMC), allowing for the determination of both static and dynamical properties of a polymer system. The RxDPD method is demonstrated by considering several simple polydispersed homopolymer systems. RxDPD can be used to predict the polydispersity due to various effects, including solvents, additives, temperature, pressure, shear, and confinement. Extensions of the method to other polymer systems are straightforward, including grafted, cross-linked polymers, and block copolymers. To simulate polydispersity, the system contains full polymer chains and a single fractional polymer chain, i.e., a polymer chain with a single fractional DPD particle. The fractional particle is coupled to the system via a coupling parameter that varies between zero (no interaction between the fractional particle and the other particles in the system) and one (full interaction between the fractional particle and the other particles in the system). The time evolution of the system is governed by the DPD equations of motion, accompanied by changes in the coupling parameter. The coupling-parameter changes are either accepted with a probability derived from the grand canonical partition function or governed by an equation of motion derived from the extended Lagrangian. The coupling-parameter changes mimic forward and reverse reaction steps, as in RxMC simulations. read less NOT USED (high confidence) K. van Workum, G. Gao, J. Schall, and J. Harrison, “Expressions for the stress and elasticity tensors for angle-dependent potentials.,” The Journal of chemical physics. 2006. link Times cited: 20 Abstract: The stress and elasticity tensors for interatomic potentials… read moreAbstract: The stress and elasticity tensors for interatomic potentials that depend explicitly on bond bending and dihedral angles are derived by taking strain derivatives of the free energy. The resulting expressions can be used in Monte Carlo and molecular dynamics simulations in the canonical and microcanonical ensembles. These expressions are particularly useful at low temperatures where it is difficult to obtain results using the fluctuation formula of Parrinello and Rahman [J. Chem. Phys. 76, 2662 (1982)]. Local elastic constants within heterogeneous and composite materials can also be calculated as a function of temperature using this method. As an example, the stress and elasticity tensors are derived for the second-generation reactive empirical bond-order potential. This potential energy function was used because it has been used extensively in computer simulations of hydrocarbon materials, including carbon nanotubes, and because it is one of the few potential energy functions that can model chemical reactions. To validate the accuracy of the derived expressions, the elastic constants for diamond and graphite and the Young's Modulus of a (10,10) single-wall carbon nanotube are all calculated at T = 0 K using this potential and compared with previously published data and results obtained using other potentials. read less NOT USED (high confidence) B. Czerwinski, R. Samson, B. Garrison, N. Winograd, and Z. Postawa, “Desorption of organic overlayers by Ga and C60 bombardment,” Vacuum. 2006. link Times cited: 31 NOT USED (high confidence) M. Buehler, “Atomistic and continuum modeling of mechanical properties of collagen: Elasticity, fracture, and self-assembly,” Journal of Materials Research. 2006. link Times cited: 268 Abstract: We report studies of the mechanical properties of tropocolla… read moreAbstract: We report studies of the mechanical properties of tropocollagen molecules under different types of mechanical loading including tension, compression, shear, and bending. Our modeling yields predictions of the fracture strength of single tropocollagen molecules and polypeptides, and also allows for quantification of the interactions between tropocollagen molecules. Atomistic modeling predicts a persistence length of tropocollagen molecules ξ ≈ 23.4 nm, close to experimental measurements. Our studies suggest that to describe large-strain or hyperelastic properties, it is critical to include a correct description of the bond behavior and breaking processes at large bond stretch, information that stems from the quantum chemical details of bonding. We use full atomistic calculations to derive parameters for a mesoscopic bead-spring model of tropocollagen molecules. We demonstrate that the mesoscopic model enables one to study the finite temperature, long-time scale behavior of tropocollagen fibers, illustrating the dynamics of solvated tropocollagen molecules for different molecular lengths. read less NOT USED (high confidence) A. Violi and A. Venkatnathan, “Combustion-generated nanoparticles produced in a benzene flame: a multiscale approach.,” The Journal of chemical physics. 2006. link Times cited: 47 Abstract: This paper details the multiscale methodology developed to a… read moreAbstract: This paper details the multiscale methodology developed to analyze the formation of nanoparticles in a manner that makes it possible to follow the evolution of the structures in a chemically specific way. The atomistic model for particle inception code that combines the strengths of kinetic Monte Carlo and molecular dynamics is used to study the chemical and physical properties of nanoparticles generated in a premixed fuel-rich benzene flame, providing atomistic scale structures (bonds, bond angles, dihedral angles) as soot precursors evolve into a three-dimensional structure. Morphology, density, porosity, and other physical properties are computed. Two heights corresponding to two different times in the benzene flame, experimentally studied by Bittner and Howard [Proc. Combust. Inst. 18, 1105 (1981)], were chosen to examine the influence of different environments on structural properties of the particles formed. read less NOT USED (high confidence) E. J. Smiley, Z. Postawa, I. A. Wojciechowski, N. Winograd, and B. Garrison, “Coarse-grained molecular dynamics studies of cluster-bombarded benzene crystals,” Applied Surface Science. 2006. link Times cited: 40 NOT USED (high confidence) B. Czerwinski, A. Delcorte, B. Garrison, R. Samson, N. Winograd, and Z. Postawa, “Sputtering of thin benzene and polystyrene overlayers by keV Ga and C 60 bombardment,” Applied Surface Science. 2006. link Times cited: 16 NOT USED (high confidence) V. Solomko, M. Verstraete, A. Delcorte, B. Garrison, X. Gonze, and P. Bertrand, “Modeling the dissociation and ionization of a sputtered organic molecule,” Applied Surface Science. 2006. link Times cited: 3 NOT USED (high confidence) G. Gao, K. Workum, J. Schall, and J. A. Harrison, “Elastic constants of diamond from molecular dynamics simulations,” Journal of Physics: Condensed Matter. 2006. link Times cited: 48 Abstract: The elastic constants of diamond between 100 and 1100 K have… read moreAbstract: The elastic constants of diamond between 100 and 1100 K have been calculated for the first time using molecular dynamics and the second-generation, reactive empirical bond-order potential (REBO). This version of the REBO potential was used because it was redesigned to be able to model the elastic properties of diamond and graphite at 0 K while maintaining its original capabilities. The independent elastic constants of diamond, C11, C12, and C44, and the bulk modulus were all calculated as a function of temperature, and the results from the three different methods are in excellent agreement. By extrapolating the elastic constant data to 0 K, it is clear that the values obtained here agree with the previously calculated 0 K elastic constants. Because the second-generation REBO potential was fit to obtain better solid-state force constants for diamond and graphite, the agreement with the 0 K elastic constants is not surprising. In addition, the functional form of the second-generation REBO potential is able to qualitatively model the functional dependence of the elastic constants and bulk modulus of diamond at non-zero temperatures. In contrast, reactive potentials based on other functional forms do not reproduce the correct temperature dependence of the elastic constants. The second-generation REBO potential also correctly predicts that diamond has a negative Cauchy pressure in the temperature range examined. read less NOT USED (high confidence) F. Moulin, S. Picaud, P. Hoang, L. Pártay, and P. Jedlovszky, “A grand canonical Monte-Carlo simulation study of water adsorption on a model soot particle,” Molecular Simulation. 2006. link Times cited: 19 Abstract: The grand canonical Monte-Carlo (GCMC) method is used to sim… read moreAbstract: The grand canonical Monte-Carlo (GCMC) method is used to simulate the adsorption of water molecules on a spherical soot particle. Soot is modelled by graphite-type layers arranged in an onion-like structure. The calculated water adsorption isotherm at 298 K exhibits two plateaus, corresponding to the filling of the internal core of the soot particle and to the three-dimensional condensation of the water molecules around it, respectively. Moreover, no wetting of the external soot surface is evidenced. The results of these simulations can help in interpreting experimental isotherms of water adsorbed on aircraft soot. read less NOT USED (high confidence) T. X. Nguyen, S. Bhatia, S. Jain, and K. Gubbins, “Structure of saccharose-based carbon and transport of confined fluids: hybrid reverse Monte Carlo reconstruction and simulation studies,” Molecular Simulation. 2006. link Times cited: 43 Abstract: We present results of the reconstruction of a saccharose-bas… read moreAbstract: We present results of the reconstruction of a saccharose-based activated carbon (CS1000a) using hybrid reverse Monte Carlo (HRMC) simulation, recently proposed by Opletal et al. [1]. Interaction between carbon atoms in the simulation is modeled by an environment dependent interaction potential (EDIP) [2,3]. The reconstructed structure shows predominance of sp2 over sp3 bonding, while a significant proportion of sp hybrid bonding is also observed. We also calculated a ring distribution and geometrical pore size distribution of the model developed. The latter is compared with that obtained from argon adsorption at 87 K using our recently proposed characterization procedure [4], the finite wall thickness (FWT) model. Further, we determine self-diffusivities of argon and nitrogen in the constructed carbon as functions of loading. It is found that while there is a maximum in the diffusivity with respect to loading, as previously observed by Pikunic et al. [5], diffusivities in the present work are 10 times larger than those obtained in the prior work, consistent with the larger pore size as well as higher porosity of the activated saccharose carbon studied here. read less NOT USED (high confidence) W. K. Liu, E. Karpov, and H. S. Park, “Classical Molecular Dynamics.” 2006. link Times cited: 0 NOT USED (high confidence) J. Marian, L. Zepeda-Ruiz, G. Gilmer, E. Bringa, and T. Rognlien, “Simulations of carbon sputtering in amorphous hydrogenated samples,” Physica Scripta. 2006. link Times cited: 29 Abstract: The interaction of edge plasma with material surfaces raises… read moreAbstract: The interaction of edge plasma with material surfaces raises key issues for the viability of the international thermonuclear reactor (ITER) and future fusion reactors, including heat-flux limits, net material erosion and impurity production. After exposure of the graphite divertor plates to the plasma in a fusion device, an amorphous C/H layer forms. This layer contains 20–30 atomic percent D/T bonded to C. Subsequent D/T impingement on this layer produces a variety of hydrocarbons that are sputtered back into the sheath region. We present molecular dynamics (MD) simulations of D/T impacts on amorphous carbon layer as a function of ion energy and orientation, using the AIREBO potential. In particular, energies are varied between 10 and 150 eV to transition from chemical to physical sputtering. These results are used to quantify yield, hydrocarbon composition and eventual plasma contamination. read less NOT USED (high confidence) K. Nordlund, “Atomistic simulations of plasma–wall interactions in fusion reactors,” Physica Scripta. 2006. link Times cited: 6 Abstract: Atomistic computer simulations, especially molecular dynamic… read moreAbstract: Atomistic computer simulations, especially molecular dynamics, but also kinetic Monte Carlo simulations and electronic structure calculations, have proven to be a valuable tool for studying radiation effects in fusion reactor materials. In this paper, I will first review a few cases where these methods have given additional insights into the interaction between a fusion plasma and the first wall of a reactor. Then I will, in the spirit of the workshop theme of ‘new directions in plasma–wall interactions’ discuss some possible future avenues of research. read less NOT USED (high confidence) N. Juslin et al., “Analytical interatomic potential for modeling nonequilibrium processes in the W–C–H system,” Journal of Applied Physics. 2005. link Times cited: 264 Abstract: A reactive interatomic potential based on an analytical bond… read moreAbstract: A reactive interatomic potential based on an analytical bond-order scheme is developed for the ternary system W–C–H. The model combines Brenner’s hydrocarbon potential with parameter sets for W–W, W–C, and W–H interactions and is adjusted to materials properties of reference structures with different local atomic coordinations including tungsten carbide, W–H molecules, as well as H dissolved in bulk W. The potential has been tested in various scenarios, such as surface, defect, and melting properties, none of which were considered in the fitting. The intended area of application is simulations of hydrogen and hydrocarbon interactions with tungsten, which have a crucial role in fusion reactor plasma-wall interactions. Furthermore, this study shows that the angular-dependent bond-order scheme can be extended to second nearest-neighbor interactions, which are relevant in body-centered-cubic metals. Moreover, it provides a possibly general route for modeling metal carbides. © 2005 American Institute of Physics. DOI: 10.1063/1.2149492 read less NOT USED (high confidence) P. Mikulski, L. A. Herman, and J. Harrison, “Odd and even model self-assembled monolayers: links between friction and structure.,” Langmuir : the ACS journal of surfaces and colloids. 2005. link Times cited: 54 Abstract: The friction between an amorphous carbon tip and two n-alkan… read moreAbstract: The friction between an amorphous carbon tip and two n-alkane monolayers has been examined using classical molecular dynamics simulations. The two monolayers have the same packing density, but the chains comprising each monolayer differ in length by one -CH2- unit. The simulations show that the monolayers composed of C13 chains have higher friction than those composed of C14 chains when sliding in the direction of chain cant; the difference in friction becomes more pronounced as the load is increased. Examination of the contact forces between the chains and the tip, along with conformational differences between the two chain types, lends insight into the friction differences. read less NOT USED (high confidence) A. Delcorte, “Organic surfaces excited by low-energy ions: atomic collisions, molecular desorption and buckminsterfullerenes.,” Physical chemistry chemical physics : PCCP. 2005. link Times cited: 18 Abstract: This article reviews the recent progress in the understandin… read moreAbstract: This article reviews the recent progress in the understanding of kiloelectronvolt particle interactions with organic solids, including atomic displacements in a light organic medium, vibrational excitation and desorption of fragments and entire molecules. This new insight is the result of a combination of theoretical and experimental approaches, essentially molecular dynamics (MD) simulations and secondary ion mass spectrometry (SIMS). Classical MD simulations provide us with a detailed microscopic view of the processes occurring in the bombarded target, from the collision cascade specifics to the scenarios of molecular emission. Time-of-flight SIMS measures the mass and energy distributions of sputtered ionized fragments and molecular species, a precious source of information concerning their formation, desorption, ionization and delayed unimolecular dissociation in the gas phase. The mechanisms of energy transfer and sputtering are compared for bulk molecular solids, organic overlayers on metal and large molecules embedded in a low-molecular weight matrix. These comparisons help understand some of the beneficial effects of metal substrates and matrices for the analysis of molecules by SIMS. In parallel, I briefly describe the distinct ionization channels of molecules sputtered from organic solids and overlayers. The specific processes induced by polyatomic projectile bombardment, especially fullerenes, are discussed on the basis of new measurements and calculations. Finally, the perspective addresses the state-of-the-art and potential developments in the fields of surface modification and analysis of organic materials by kiloelectronvolt ion beams. read less NOT USED (high confidence) I. Valuev, “Reactive potentials for molecular dynamics with cluster multi-range interpolation,” Comput. Phys. Commun. 2005. link Times cited: 1 NOT USED (high confidence) M. Grujicic, G. Cao, and W. Roy, “Computational analysis of the lattice contribution to thermal conductivity of single-walled carbon nanotubes,” Journal of Materials Science. 2005. link Times cited: 55 NOT USED (high confidence) A. Strachan, E. Kober, A. V. van Duin, J. Oxgaard, and W. Goddard, “Thermal decomposition of RDX from reactive molecular dynamics.,” The Journal of chemical physics. 2005. link Times cited: 356 Abstract: We use the recently developed reactive force field ReaxFF wi… read moreAbstract: We use the recently developed reactive force field ReaxFF with molecular dynamics to study thermal induced chemistry in RDX [cyclic-[CH(2)N(NO(2))](3)] at various temperatures and densities. We find that the time evolution of the potential energy can be described reasonably well with a single exponential function from which we obtain an overall characteristic time of decomposition that increases with decreasing density and shows an Arrhenius temperature dependence. These characteristic timescales are in reasonable quantitative agreement with experimental measurements in a similar energetic material, HMX [cyclic-[CH(2)N(NO(2))](4)]. Our simulations show that the equilibrium population of CO and CO(2) (as well as their time evolution) depend strongly of density: at low density almost all carbon atoms form CO molecules; as the density increases larger aggregates of carbon appear leading to a C deficient gas phase and the appearance of CO(2) molecules. The equilibrium populations of N(2) and H(2)O are more insensitive with respect to density and form in the early stages of the decomposition process with similar timescales. read less NOT USED (high confidence) P. Mikulski, G. Gao, G. M. Chateauneuf, and J. Harrison, “Contact forces at the sliding interface: mixed versus pure model alkane monolayers.,” The Journal of chemical physics. 2005. link Times cited: 36 Abstract: Classical molecular dynamics simulations of an amorphous car… read moreAbstract: Classical molecular dynamics simulations of an amorphous carbon tip sliding against monolayers of n-alkane chains are presented. The tribological behavior of tightly packed, pure monolayers composed of chains containing 14 carbon atoms is compared to mixed monolayers that randomly combine equal amounts of 12- and 16-carbon-atom chains. When sliding in the direction of chain cant under repulsive (positive) loads, pure monolayers consistently show lower friction than mixed monolayers. The distribution of contact forces between individual monolayer chain groups and the tip shows pure and mixed monolayers resist tip motion similarly. In contrast, the contact forces "pushing" the tip along differ in the two monolayers. The pure monolayers exhibit a high level of symmetry between resisting and pushing forces which results in a lower net friction. Both systems exhibit a marked friction anisotropy. The contact force distribution changes dramatically as a result of the change in sliding direction, resulting in an increase in friction. Upon continued sliding in the direction perpendicular to chain cant, both types of monolayers are often capable of transitioning to a state where the chains are primarily oriented with the cant along the sliding direction. A large change in the distribution of contact forces and a reduction in friction accompany this transition. read less NOT USED (high confidence) A. Violi, “Modeling of soot particle inception in aromatic and aliphatic premixed flames,” Combustion and Flame. 2004. link Times cited: 133 NOT USED (high confidence) H. Yamada and S. Hamaguchi, “Molecular-dynamics simulations of organic polymer etching by hydrocarbon beams,” Journal of Applied Physics. 2004. link Times cited: 33 Abstract: Molecular-dynamics simulations of hydrocarbon beam injection… read moreAbstract: Molecular-dynamics simulations of hydrocarbon beam injections into a poly (1,4-phenylene) substrate surface are carried out with the use of classical potential functions for covalent bonds of carbon and hydrogen atoms. Van der Waals interactions among carbon atoms are also taken into account. In the low injection energy (50eV) regime, we have observed that injected carbon atoms tend to be deposited on the surface, whereas hydrogen atoms tend to chemically break carbon bonds in the substrate. With the combination of chemical effects by hydrogen with large momenta carried by the injected carbon atoms, hydrogen-rich carbon clusters can etch organic polymer surfaces with relatively high efficiency. Implications of our simulation results on etching processes of low-dielectric-constant organic polymers by hydrogen-nitrogen plasmas are also discussed. read less NOT USED (high confidence) O. Kum, B. Dickson, S. Stuart, B. Uberuaga, and A. Voter, “Parallel replica dynamics with a heterogeneous distribution of barriers: application to n-hexadecane pyrolysis.,” The Journal of chemical physics. 2004. link Times cited: 24 Abstract: Parallel replica dynamics simulation methods appropriate for… read moreAbstract: Parallel replica dynamics simulation methods appropriate for the simulation of chemical reactions in molecular systems with many conformational degrees of freedom have been developed and applied to study the microsecond-scale pyrolysis of n-hexadecane in the temperature range of 2100-2500 K. The algorithm uses a transition detection scheme that is based on molecular topology, rather than energetic basins. This algorithm allows efficient parallelization of small systems even when using more processors than particles (in contrast to more traditional parallelization algorithms), and even when there are frequent conformational transitions (in contrast to previous implementations of the parallel replica algorithm). The parallel efficiency for pyrolysis initiation reactions was over 90% on 61 processors for this 50-atom system. The parallel replica dynamics technique results in reaction probabilities that are statistically indistinguishable from those obtained from direct molecular dynamics, under conditions where both are feasible, but allows simulations at temperatures as much as 1000 K lower than direct molecular dynamics simulations. The rate of initiation displayed Arrhenius behavior over the entire temperature range, with an activation energy and frequency factor of E(a) = 79.7 kcal/mol and log A/s(-1) = 14.8, respectively, in reasonable agreement with experiment and empirical kinetic models. Several interesting unimolecular reaction mechanisms were observed in simulations of the chain propagation reactions above 2000 K, which are not included in most coarse-grained kinetic models. More studies are needed in order to determine whether these mechanisms are experimentally relevant, or specific to the potential energy surface used. read less NOT USED (high confidence) G. M. Chateauneuf, P. Mikulski, G. Gao, and J. Harrison, “Compression- and Shear-Induced Polymerization in Model Diacetylene-Containing Monolayers,” Journal of Physical Chemistry B. 2004. link Times cited: 27 Abstract: Molecular dynamics simulations have been used to examine the… read moreAbstract: Molecular dynamics simulations have been used to examine the response of monolayers composed of alkyne chains, which contain diacetylene moieties, to compression and shear. The simulations show that both compression and shear result in cross-linking, or polymerization, between chains. Irregular polymerization patterns appear among the carbon backbones. The vertical positioning of the diacetylene moieties within the alkyne chains (spacer length) and the sliding direction have an influence on the pattern of cross-linking and friction. In addition, chemical reactions between the chains of the monolayer and the amorphous carbon tip occur when diacetylene moieties are located at the ends of the chains closest to the tip. These adhesive interactions increase friction. read less NOT USED (high confidence) S. Stuart, Y. Li, O. Kum, J. Mintmire, and A. Voter, “Reactive Bond-Order Simulations Using Both Spatial and Temporal Approaches to Parallelism,” Structural Chemistry. 2004. link Times cited: 11 NOT USED (high confidence) B. Ni, K.-H. Lee, and S. Sinnott, “A reactive empirical bond order (REBO) potential for hydrocarbon oxygen interactions,” Journal of Physics: Condensed Matter. 2004. link Times cited: 108 Abstract: The expansion of the second-generation reactive empirical bo… read moreAbstract: The expansion of the second-generation reactive empirical bond order (REBO) potential for hydrocarbons, as parametrized by Brenner and co-workers, to include oxygen is presented. This involves the explicit inclusion of C–O, H–O, and O–O interactions to the existing C–C, C–H, and H–H interactions in the REBO potential. The details of the expansion, including all parameters, are given. The new, expanded potential is then applied to the study of the structure and chemical stability of several molecules and polymer chains, and to modelling chemical reactions among a series of molecules, within classical molecular dynamics simulations. read less NOT USED (high confidence) E. Santiso and K. Gubbins, “Multi-scale Molecular Modeling of Chemical Reactivity,” Molecular Simulation. 2004. link Times cited: 62 Abstract: We present a review of the most widely used methods to model… read moreAbstract: We present a review of the most widely used methods to model chemical reactions, at both the electronic and atomistic levels. While, in principle, ab initio methods alone should provide the required prediction of reaction mechanisms, yields and rates, in practice this can rarely be achieved due to the intensive nature of the computations and the poor scaling of the computational burden with the number of electrons. In many applications a combination of ab initio and semi-classical atomistic simulations will be needed. Specialized atomistic simulation methods are necessary, since the reactions are themselves rare events, and the free energy landscape for the reaction is often rugged with many possible reaction paths. We provide a survey of these methods, with comments on their applicability and a description of their strengths and weaknesses. read less NOT USED (high confidence) J. Pomoell, A. Krasheninnikov, K. Nordlund, and J. Keinonen, “Ion ranges and irradiation-induced defects in multiwalled carbon nanotubes,” Journal of Applied Physics. 2004. link Times cited: 85 Abstract: Recent experiments on ion irradiation of carbon nanotubes ha… read moreAbstract: Recent experiments on ion irradiation of carbon nanotubes have revealed a wealth of intriguing phenomena. However, in spite of the experimental progress, the production of irradiation-induced defects in multiwalled nanotubes (MWNTs) and their properties are not yet well understood. By employing molecular dynamics with analytical potentials we simulate irradiation of MWNTs with various noble-gas ions and calculate the ion ranges as a function of ion energy. We also use the conventional binary collision stochastic approach to estimate the ranges and compare the results obtained through the two methods. We further characterize the irradiation-induced defects which appear in MWNTs under both single ion impacts and high-dose bombardment. We finally study if, similarly to carbon onions, irradiation can give rise to transformations of nanotubes to nanodiamond rods and demonstrate that such transformations do not occur in MWNTs due to their tubular structure. read less NOT USED (high confidence) M. Grujicic, G. Cao, and B. Gersten, “Atomic-scale computations of the lattice contribution to thermal conductivity of single-walled carbon nanotubes,” Materials Science and Engineering B-advanced Functional Solid-state Materials. 2004. link Times cited: 86 NOT USED (high confidence) A. Krasheninnikov and K. Nordlund, “Irradiation effects in carbon nanotubes,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2004. link Times cited: 219 NOT USED (high confidence) M. Nyden, S. Stoliarov, P. R. Westmoreland, Z. Guo, and C. Jee, “Applications of reactive molecular dynamics to the study of the thermal decomposition of polymers and nanoscale structures,” Materials Science and Engineering A-structural Materials Properties Microstructure and Processing. 2004. link Times cited: 51 NOT USED (high confidence) B. Arezki, A. Delcorte, A. Chami, B. Garrison, and P. Bertrand, “Gold-thiolate cluster emission from SAMs under keV ion bombardment: Experiments and molecular dynamics simulations,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2003. link Times cited: 17 NOT USED (high confidence) O. Kum, F. Ree, S. Stuart, and C. J. Wu, “Molecular dynamics investigation on liquid–liquid phase change in carbon with empirical bond-order potentials,” Journal of Chemical Physics. 2003. link Times cited: 16 Abstract: A liquid–liquid phase transition in carbon is investigated w… read moreAbstract: A liquid–liquid phase transition in carbon is investigated with two recent bond-order potentials. In contrary to a previous bond-order model, they show no phase change in liquid carbon, which agrees with simulations based on the nonempirical density-functional theory (DFT). Ab initio and DFT studies carried out in this work show that the observed discrepancy lies not in any inherent shortcoming in using empirical models for the bonding process, but rather in the quality of individual expressions used to represent a conjugated local environment in liquid carbon. The present work shows that the current bond-order models and a slightly modified potential proposed in this work agree with recent quantum mechanical simulations and will provide a viable tool for a large-scale study of carbon over a wide range of pressures and temperatures. read less NOT USED (high confidence) J. Los and A. Fasolino, “Intrinsic long-range bond-order potential for carbon: Performance in Monte Carlo simulations of graphitization,” Physical Review B. 2003. link Times cited: 233 Abstract: We propose a bond order potential for carbon with built-in l… read moreAbstract: We propose a bond order potential for carbon with built-in long-range interactions. The potential is defined as the sum of an angular and coordination dependent short-range part accounting for the strong covalent interactions and a radial long-range part describing the weak interactions responsible, e.g., for the interplanar binding in graphite. The short-range part is a Brenner type of potential, with several modifications introduced to get an improved description of elastic properties and conjugation. Contrary to previous long-range extensions of existing bond order potentials, we prevent the loss of accuracy by compensating for the additional long-range interactions by an appropriate parametrization of the short-range part. We also provide a short-range bond order potential. In Monte Carlo simulations our potential gives a good description of the diamond to graphite transformation. For thin (111) slabs graphitization proceeds perpendicular to the surface as found in ab initio simulations, whereas for thick layers we find that graphitization occurs layer by layer. read less NOT USED (high confidence) M. Elert, S. Zybin, and C. T. White, “Molecular dynamics study of shock-induced chemistry in small condensed-phase hydrocarbons,” Journal of Chemical Physics. 2003. link Times cited: 27 Abstract: Molecular dynamics simulations using an empirical bond order… read moreAbstract: Molecular dynamics simulations using an empirical bond order potential have been performed to investigate shock-induced chemistry in solid acetylene, ethylene, and methane. Acetylene was found to undergo significant polymerization reactions for flyer plate impact speeds above 10 km/s. These conditions are similar to those which would be experienced upon planetary impact of comets, which are known to contain condensed-phase acetylene. Ethylene exhibits similar reactivity above 15 km/s. Methane undergoes hydrogen abstraction reactions at flyer plate impact speeds of 16–20 km/s and produces hydrocarbon chains at higher impact speeds. The latter results are significant for elucidating the fate of atmospheric methane upon cometary or meteor impact, and for predicting the initial reaction steps in the reactivity of methane ices in the high-pressure, high-temperature interiors of Neptune and Uranus. read less NOT USED (high confidence) Z. Postawa, K. Ludwig, J. Piaskowy, K. D. Krantzman, N. Winograd, and B. Garrison, “Molecular dynamic simulations of the sputtering of multilayer organic systems,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2003. link Times cited: 14 NOT USED (high confidence) S. Stuart, J. Hicks, and M. T. Mury, “An Iterative Variable-timestep Algorithm for Molecular Dynamics Simulations,” Molecular Simulation. 2003. link Times cited: 8 Abstract: A method for performing variable-timestep molecular dynamics… read moreAbstract: A method for performing variable-timestep molecular dynamics integration is described, in which an iterative algorithm is used to select the largest timestep consistent with the desired simulation accuracy. Accuracy in this context is defined in terms of energy conservation, rather than trajectory correctness. Specifically, a timestep-independent measure of the rate of "diffusion" of the total energy is used. This variable timestep approach is compared to fixed-timestep integration for three different hydrocarbon systems (polyethylene, liquid benzene and ethylene), which are modeled with a reactive bond-order potential. These systems represent both equilibrium and highly non-equilibrium systems at temperatures ranging from 298 to 2500 K. The variable-timestep method is found to be approximately twice as computationally efficient as fixed-timestep integration for the non-equilibrium sputtering of polyethylene, and the two methods were competitive for the equilibrium systems. The algorithm requires the specification of two parameters controlling the rates of timestep growth and decay, but it is found that one set of values is appropriate for all three systems studied, and there is reason to believe that the parameters are transferable to other systems. The algorithm was developed specifically for simulations involving disparate timescales, such as are encountered with the reactive bond-order model used here, but it should also prove beneficial for a wide range of molecular dynamics applications. read less NOT USED (high confidence) A. Delcorte, B. Arezki, P. Bertrand, and B. Garrison, “Sputtering kilodalton fragments from polymers,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2002. link Times cited: 7 NOT USED (high confidence) D. Brenner, O. Shenderova, J. Harrison, S. Stuart, B. Ni, and S. Sinnott, “A second-generation reactive empirical bond order (REBO) potential energy expression for hydrocarbons,” Journal of Physics: Condensed Matter. 2002. link Times cited: 3204 Abstract: A second-generation potential energy function for solid carb… read moreAbstract: A second-generation potential energy function for solid carbon and hydrocarbon molecules that is based on an empirical bond order formalism is presented. This potential allows for covalent bond breaking and forming with associated changes in atomic hybridization within a classical potential, producing a powerful method for modelling complex chemistry in large many-atom systems. This revised potential contains improved analytic functions and an extended database relative to an earlier version (Brenner D W 1990 Phys. Rev. B 42 9458). These lead to a significantly better description of bond energies, lengths, and force constants for hydrocarbon molecules, as well as elastic properties, interstitial defect energies, and surface energies for diamond. read less NOT USED (high confidence) K. D. Krantzman, Z. Postawa, B. Garrison, N. Winograd, S. Stuart, and J. Harrison, “Understanding collision cascades in molecular solids,” Nuclear Instruments & Methods in Physics Research Section B-beam Interactions With Materials and Atoms. 2001. link Times cited: 38 NOT USED (high confidence) D. Ye-Zhang et al., “Study on molecular dynamics simulation of graphene deposition and growth on WC-Co cemented carbides,” Acta Physica Sinica. 2023. link Times cited: 0 Abstract: In this paper, molecular dynamics is used to simulate the se… read moreAbstract: In this paper, molecular dynamics is used to simulate the self-assembly of carbon atoms and the growth of graphene on the surface of cemented carbide, which has some advantages, such as reducing manufacturing costs, shortening the experimental cycle, and optimizing the preparation parameters of graphene. A proper potential function was designed to simulate the formation of graphene on the WC (1010) and Co (0001) surfaces by a single carbon atom. The growth process of graphene, such as the deposition of carbon atoms, the formation of carbon chains with different lengths, the transformation of carbon chains into polygons, and the basic units and natural defects of graphene are investigated in detail. Three processes of self-repair of graphene defects, including carbon chain rotation, splitting and embedding, are described respectively. The effects of temperature and carbon deposition rate on the growth of high-quality graphene are also studied. The simulation results show that, at low temperature, the mobility of carbon atoms is low and grown graphene contains a lot of defects, and the coverage of the substrate is low, which leads to low quality graphene to be prepared. High temperature promotes the migration of carbon atoms and help to grow high quality graphene. However, high temperature caused damage to the substrate and reduce the flatness of the growing graphene. At a higher deposition rate, the nucleation rate of graphene is higher and the distribution is more uniform. However, due to the different ability of each graphene nucleus to absorb carbon atoms, there are many macrocyclic defects in the graphene. The low deposition rate has a longer annealing time, which excessively stimulates the migration of carbon atoms. It leads to the aggregation of carbon atoms and reduces the quality of graphene. The proper deposition rate can ensure the nucleation density of graphene, at the same time, it has enough time to form six membered rings and repair defects, which is conducive to the formation of the high quality graphene. Therefore, it is significantly important to design the appropriate deposition temperature and deposition rate for the growth of high-quality graphene. After optimizing the simulation parameters, high-quality graphene was successfully grown at 1300K deposition temperature and 10ps/C deposition rate. read less NOT USED (high confidence) Z.-F. Ming, H. Song, and M. An, “Mechanical behavior of graphene magnesium matrix composites based on molecular dynamics simulation,” Acta Physica Sinica. 2022. link Times cited: 1 Abstract: Magnesium alloy is regarded as a lightest engineering struct… read moreAbstract: Magnesium alloy is regarded as a lightest engineering structural metal material due to its low density, but its wide application is limited due to poor plastic deformation behavior. Therefore, the comprehensive mechanical properties of enhanced magnesium alloy have become a research focus in the material science. Here, the effect of graphene on the deformation behavior and that on the mechanical properties of magnesium under tensile loading are studied by molecular dynamics simulation. The results show that the introduction of graphene can significantly improve the mechanical properties of pure magnesium. Comparing with pure magnesium, the Young's modulus and the first peak stress of the graphene magnesium matrix (GR/Mg) composites are increased by about 27.5% and 36.5% respectively, which is mainly due to the excellent mechanical properties of graphene. The results also indicate that the embedded position of graphene has little effect on the Young's modulus or peak stress of the Gr/Mg composites, but it will significantly affect the plastic deformation behavior of the Gr/Mg composites after the second peak stress. With the increase of the embedded height of graphene, the average flow stress of the GR/Mg composites first increases in the later stage of plastic deformation. When the embedded height reaches 0.4L, the average flow stress of the GR/Mg composites reaches a maximum value, and then decreases. This phenomenon of the Gr/Mg composites can be explained by the plastic deformation behavior of the magnesium matrix above and below graphene. The embedded position of graphene has a great influence on the plastic deformation behavior of the upper and lower magnesium matrix of the GR/Mg composites. When the embedded height of graphene is small, the plastic deformation capability of magnesium matrix under graphene is strong and dislocation slip is easy to occur. And when the embedded height of graphene is large, the plastic deformation capabilities of the two parts of magnesium matrix above and below graphene are equal, and their plastic deformation behavior tends to be synchronous. The results show that the plastic deformation behavior of the GR/Mg composite is the same as that of pure magnesium, and the phase transition from HCP to BCC and then to HCP occurs in the process of the plastic deformation. The phase transition mechanism of magnesium matrix is also analyzed in detail. The results of this study have certain theoretical guiding significance in designing the high performance graphene metal matrix composites. read less NOT USED (high confidence) J.-Q. Zhu, X. Liu, Z. Wang, and Q. Yang, “Wrinkles-assisted nanocrystalline formation and mechanical properties of wrinkled graphene/aluminum matrix composites,” Modelling and Simulation in Materials Science and Engineering. 2021. link Times cited: 3 Abstract: The graphene-reinforced metal matrix composites (Gr/MMCs), p… read moreAbstract: The graphene-reinforced metal matrix composites (Gr/MMCs), prepared by additive manufacturing technology, render a wide range of promising applications. The graphene sheets in Gr/MMCs may get wrinkled during preparation, which renders a significant influence on crystalline texture and deformation behavior. Herein, molecular dynamics models of wrinkled graphene/aluminum (W-Gr/Al) composites are established to study the effect of graphene wrinkle angle on crystal texture of the metallic matrix during the sintering process and mechanical properties of the resulting composites. The results indicate that the sintering temperature significantly affects the molding quality of W-Gr/Al composites, promoting the transformation of sintering mechanism. Furthermore, new wrinkles appear on initially-wrinkled graphene surfaces during the sintering process, resulting in grain boundaries and twin boundaries (TBs), which facilitate the refinement of Al grains. Moreover, uniaxial compression tests reveal that the W-Gr/Al composites sintered at 900 K exhibit the highest Young’s modulus and yield strength. It has been demonstrated that the enhancement effect of composite originates from the skeleton network, consisting of wrinkled graphene and TBs. These results provide significant guidance for the design and development of Gr/MMCs. read less NOT USED (high confidence) M. Rozhkov, N. Abramenko, A. Kolesnikova, and A. Romanov, “Zero misorientation interfaces in graphene,” Letters on Materials. 2020. link Times cited: 6 Abstract: This article presents the results on the modeling of straigh… read moreAbstract: This article presents the results on the modeling of straight-line interfaces that induce no misorientation of adjacent regions in graphene: zero misorientation interfaces (ZMIs). The interfaces in the hexagonal graphene lattice are represented as ensembles of disclinated carbon rings with broken rotational symmetry of the sixth order. The basic elements of such ensembles are structural units — complexes of disclinated rings with zero disclination charge. Using molecular dynamics simulation, the energies and atomic densities for ZMIs are found. Calculations demonstrate that atomic densities in ZMIs are lower than the atomic density in defect-free graphene. No direct correlation has been revealed between the atomic density and the interface energy. It is assumed, that the elastic field caused by ZMI defect structure contributes significantly to the energy of interface. Low-energy ZMIs possess linear energies not exceeding ~0.6 – 0.8 eV / Å, that is comparable to the energies of the grain boundaries, i. e. boundaries with misorientation, in graphene. Based on a mesoscopic approach operating with disclination schemes, in which defective carbon rings are replaced by disclinations, strain maps are plotted, and energies are found for two selected low-energy ZMIs. It is demonstrated that, at the distance of ZMI half-period from interface line, strains decrease to values of ~0.05. The energies of low-energy ZMIs calculated within the framework of two approaches: atomistic and mesoscopic, although differ numerically, coincide by the order of magnitude. read less NOT USED (high confidence) V. Vardanyan and H. Urbassek, “Modeling of Nanoindentation in Ni-Graphene Nanocomposites: A Molecular Dynamics Sensitivity Study,” International Conference on Physical Modeling for Virtual Manufacturing. 2020. link Times cited: 0 Abstract: Using molecular dynamics simulation, we perform nanoindentat… read moreAbstract: Using molecular dynamics simulation, we perform nanoindentation simulations on a Ni-graphene model system, in which a graphene flake coats the grain boundary of a Ni bi-crystal. Material strengthening or weakening by inclusion of graphene is discussed with the help of the force needed to indent to a specified depth. By varying the depth of the graphene flake with respect to the indentation depth we identify the distance up to which graphene influences the indentation behavior. In addition, we vary the details of the modeling of the graphene flake in the matrix metal and determine their influence on the performance of the nanocomposite. Our results indicate that the modeling results are robust against variations in the modeling of the graphene flake. read less NOT USED (high confidence) A. Sakti, Y. Nishimura, and H. Nakai, “Recent advances in quantum‐mechanical molecular dynamics simulations of proton transfer mechanism in various water‐based environments,” Wiley Interdisciplinary Reviews: Computational Molecular Science. 2019. link Times cited: 9 Abstract: Proton transfer in water‐based environments occurs because o… read moreAbstract: Proton transfer in water‐based environments occurs because of hydrogen‐bond interaction. There are many interesting physicochemical phenomena in this field, causing fast structural diffusion of hydronium and hydroxide ions. During the last few decades, to support experimental observations and measurements, quantum‐mechanical molecular dynamics (QMMD) simulations with reasonable accuracy and efficiency have significantly unraveled structural, energetic, and dynamical properties of excess proton in aqueous environments. This review summarizes the state‐of‐the‐art QMMD studies of proton transfer processes in aqueous solutions and complex systems including bulk liquid water, ice phases, and confined water in nanochannel/nanoporous materials as well as reports on CO2 scrubbing by amine‐based chemical absorption. read less NOT USED (high confidence) A. David, A. de Nicola, U. Tartaglino, G. Milano, and G. Raos, “Viscoelasticity of Short Polymer Liquids from Atomistic Simulations,” Journal of The Electrochemical Society. 2019. link Times cited: 16 Abstract: The viscosity − or more generally the viscoelasticity − of p… read moreAbstract: The viscosity − or more generally the viscoelasticity − of polymer liquids is a key property for the processing as well as the performance of these materials. Molecular theories and numerical methods can provide these quantities, but they all require certain input parameters that nowadays are typically obtained by experiment. In the long term, it would be desirable to obtain these parameters or the whole viscoelastic response by purely computational methods, enabling a full “in silico” design of new materials and processes. In this perspective, we present several test calculations of the viscosity of n-hexadecane, a short-chain analogue of polyethylene. Our calculations are based on both equilibrium and non-equilibrium molecular dynamics (MD) simulations, which are applied to models based on a united-atom force field, a conventional atomistic force field, and the AIREBO-M reactive force field. We compare both the computational cost of the different strategies and the reliability of the different models and we provide some general guidelines for their application to more complex systems. © The Author(s) 2019. Published by ECS. This is an open access article distributed under the terms of the Creative Commons Attribution 4.0 License (CC BY, http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse of the work in any medium, provided the original work is properly cited. [DOI: 10.1149/2.0371909jes] read less NOT USED (high confidence) L. Zhigilei, R. N. Salaway, B. K. Wittmaack, and A. Volkov, “Computational Studies of Thermal Transport Properties of Carbon Nanotube Materials.” 2017. link Times cited: 5 NOT USED (high confidence) M. Kornbluth, “Anharmonic Phonons in Graphene from First Principles.” 2017. link Times cited: 1 Abstract: Anharmonic Phonons in Graphene from First Principles… read moreAbstract: Anharmonic Phonons in Graphene from First Principles read less NOT USED (high confidence) A. Nemati, H. N. Pishkenari, A. Meghdari, and S. Sohrabpour, “Directing the diffusive motion of fullerene-based nanocars using nonplanar gold surfaces.,” Physical chemistry chemical physics : PCCP. 2017. link Times cited: 19 Abstract: A new method for guiding the motion of fullerene and fullere… read moreAbstract: A new method for guiding the motion of fullerene and fullerene-based nanocars is introduced in this paper. The effects of non-flat substrates on the motion of C60, a nanocar and a nanotruck are investigated at different conditions and temperatures. Their behavior is studied using two different approaches: analyzing the variation in potential energy and conducting all-atom classical molecular dynamics simulations. This paper proposes that the use of a stepped substrate will make their motion more predictable and controllable. The results of the simulations show that C60 stays on the top side of the step and cannot jump over the step at temperatures of 400 K and lower. However, at temperatures of 500 K and higher, C60 has sufficient energy to travel to the down side of the step. C60 attaches to the edge and moves just alongside of the edge when it is on the down side of the step. The edge also restricts the motion of C60 alongside the edge and reduces its range of motion. By considering the motion of C60, the general behavior of the nanocar and nanotruck is predictable. The nanocar stays on the top side of the step at temperatures of 400 K and less; at 500 K and higher temperatures, its wheels jump off the edge, and its range of motion is restricted. The relatively rigid chassis of the nanotruck does not allow the free individual motion of the wheels. As a result, the entire nanotruck stays on the top side of the step, even at 600 K. A pathway with the desired route can be fabricated for the motion of C60 and nanocars using the method presented in this paper. This represents a step towards the directional motion of C60 and nanocars. read less NOT USED (high confidence) E. Neyts and P. Brault, “Molecular Dynamics Simulations for Plasma‐Surface Interactions,” Plasma Processes and Polymers. 2017. link Times cited: 51 Abstract: Plasma-surface interactions are in general highly complex du… read moreAbstract: Plasma-surface interactions are in general highly complex due to the interplay of many concurrent processes. Molecular dynamics simulations provide insight in some of these processes, subject to the accessible time and length scales, and the availability of suitable force fields. In this introductory tutorial-style review, we aim to describe the current capabilities and limitations of molecular dynamics simulations in this field, restricting ourselves to low-temperature non-thermal plasmas. Attention is paid to the simulation of the various fundamental processes occurring, including sputtering, etching, implantation, and deposition, as well as to what extent the basic plasma components can be accounted for, including ground state and excited species, electric fields, ions, photons, and electrons. A number of examples is provided, giving an bird's eye overview of the current state of the field. read less NOT USED (high confidence) K. VijayaSekhar, S. G. Acharyya, S. Debroy, V. P. K. Miriyala, and A. Acharyya, “Self-healing phenomena of graphene: potential and applications,” Open Physics. 2016. link Times cited: 17 Abstract: The present study investigates the self healing behavior of … read moreAbstract: The present study investigates the self healing behavior of both pristine and defected single layer graphene using a molecular dynamic simulation. Single layer graphene containing various defects such as preexisting vacancies and differently oriented pre-existing cracks were subjected to uniaxial tensile loading till fracture occurred. Once the load was relaxed, the graphene was found to undergo self healing. It was observed that this self healing behaviour of cracks holds irrespective of the nature of pre-existing defects in the graphene sheet. Cracks of any length were found to heal provided the critical crack opening distance lies within 0.3-0.5 nm for a pristine sheet and also for a sheet with pre-existing defects. Detailed bond length analysis of the graphene sheet was done to understand the mechanism of self healing of graphene. The paper also discusses the immense potential of the self healing phenomena of graphene in the field of graphene based sub-nano sensors for crack sensing. read less NOT USED (high confidence) A. Infuso, “Silicon photovoltaics: experimental testing and modelling of fracture across scales.” 2016. link Times cited: 0 Abstract: The study of the properties of materials can be addressed th… read moreAbstract: The study of the properties of materials can be addressed through a multi-scale approach, in order to have the possibility to grasp at each of the levels of analysis the peculiar aspects. Tracing a path inside the state-of-the-art in the available bibliography, historically in the field of mechanics s are found in which the material is studied through nonlocal theories based on continuous or discrete local approaches. More recently, with the advent of great computatio- nal power computers, analytical methodologies based on theories also very complex deriving from the field of chemistry and physics have been developed, capable to discretize at the ato- mic scale the material and study its behavior by applying energy approaches. Starting from the analysis of some of these theories at the nano- and micro-scales, it is possible to investi- gate the separation mechanisms at the molecular level, which may be considered as cracking processes within the material according to the adopted scale of analysis. The application of theories of this kind to large portions of material, in which there are up to some millions of particles involved is reasonably not an applicable solution, since it would require a huge effort in terms of computation time. To work around this problem and find a method suitable for the study of cracking mechanisms, a mixed method (MDFEM) was byconjugating pure molecu- lar dynamics (MD) and the finite element method (FEM), in which the material is discretized by means of one-dimensional elements whose mechanical characteristics are derived from MD. This approach is based on the application of a nonlocal theory in which the contribution of a portion of material placed within a certain distance from the point of fracture is taken into account by means of a parameter of non-locality. Moreover, the study of the evolution of cracking is addressed at the meso-scale by the application of a cohesive non-linear model. Towards the analysis of the macroscale, the theories put forward so far have been ap- plied to the study of phenomena of breakage inside Silicon cells embedded into rigid or semi-flexible photovoltaic modules. By performing various laboratory tests, useful for the characterization of the material and for understating the evolution of cracking process due to multiple causes, a study on the main issues that may compromise the durability and mainte- nance of the expected service levels of photovoltaic panels has been conducted. Experimen- tally results have been interpreted by using appropriate macro-scopic continuum models. The research carried out had the purpose to provide an introduction to a correct design of these systems of energy production in order to increase their durability and resistance to cracking read less NOT USED (high confidence) T. S. Asche, P. Behrens, and A. Schneider, “Validation of the COMPASS force field for complex inorganic–organic hybrid polymers,” Journal of Sol-Gel Science and Technology. 2016. link Times cited: 27 NOT USED (high confidence) S. Lai, I. Setiyawati, T. Yen, and Y. H. Tang, “Studying lowest energy structures of carbon clusters by bond-order empirical potentials,” Theoretical Chemistry Accounts. 2016. link Times cited: 10 NOT USED (high confidence) T. Asche, M. Duderstaedt, P. Behrens, and A. Schneider, “Atomistic Simulation of Sol–Gel-Derived Hybrid Materials.” 2016. link Times cited: 1 NOT USED (high confidence) H. A. Bennett, A. Zander, B. Cazzolato, and D. Huang, “Speedup techniques for molecular dynamics simulations of the interaction of acoustic waves and nanomaterials.” 2015. link Times cited: 4 Abstract: Computer science and engineering. Session C5. Modelling, sim… read moreAbstract: Computer science and engineering. Session C5. Modelling, simulation and optimization in engineering read less NOT USED (high confidence) J. Baimova et al., “Atomic structure and energy distribution of collapsed carbon nanotubes of different chiralities,” Journal of Nanomaterials. 2015. link Times cited: 15 Abstract: For carbon nanotubes of sufficiently large diameter at suffi… read moreAbstract: For carbon nanotubes of sufficiently large diameter at sufficiently low temperature, due to the action of the van der Waals forces, the ground state is a bilayer graphene with closed edges, the so-called collapsed configuration. Molecular dynamics simulation of collapsed carbon nanotubes is performed. The effect of length, diameter, and chirality of the nanotubes on their properties is investigated. It is shown that collapsed nanotubes after relaxation have rippled structure which is strongly dependent on the nanotube chirality. The structural properties are studied by calculating the radial distribution function and energy distribution along various regions in the collapsed carbon nanotubes. read less NOT USED (high confidence) C. Tiwary et al., “Stabilization of the high-temperature and high-pressure cubic phase of ZnO by temperature-controlled milling,” Journal of Materials Science. 2015. link Times cited: 8 NOT USED (high confidence) J. Yeo, “Modeling and simulation of the structural evolution and thermal properties of ultralight aerogel and 2D materials.” 2014. link Times cited: 1 NOT USED (high confidence) A. Sadeghirad and F. Liu, “A three-layer-mesh bridging domain for coupled atomistic-continuum simulations at finite temperature: Formulation and testing,” Computer Methods in Applied Mechanics and Engineering. 2014. link Times cited: 8 NOT USED (high confidence) V. Vijayaraghavan and C. H. Wong, “Torsional Characteristics of Single Walled Carbon Nanotube with Water Interactions by Using Molecular Dynamics Simulation.” 2014. link Times cited: 6 Abstract: The torsional characteristics of single walled carbon nanotu… read moreAbstract: The torsional characteristics of single walled carbon nanotube (SWCNT) with water interactions are studied in this work using molecular dynamics simulation method. The torsional properties of carbon nanotubes (CNTs) in a hydrodynamic environment such as water are critical for its key role in determining the lifetime and stability of CNT based nano-fluidic devices. The effect of chirality, defects and the density of water encapsulation is studied by subjecting the SWCNT to torsion. The findings show that the torsional strength of SWCNT decreases due to interaction of water molecules and presence of defects in the SWCNT. Additionally, for the case of water molecules encapsulated inside SWCNT, the torsional response depends on the density of packing of water molecules. Our findings and conclusions obtained from this paper is expected to further compliment the potential applications of CNTs as promising candidates for applications in nano-biological and nano-fluidic devices. read less NOT USED (high confidence) V. Venkatesh, “Computer simulation studies of carbon nanotube and its interactions with water.” 2014. link Times cited: 1 Abstract: ii addition to defect concentration, the location of defects… read moreAbstract: ii addition to defect concentration, the location of defects in SWCNT will also affect the mechanical properties of water submerged SWCNT. For the case of capped SWCNTs, it was found that the concentration of water molecule encapsulated inside the SWCNT strongly affects the elastic properties of the SWCNT. Another study involved the transport characteristics of water molecules in CNTs using MD simulation. The transport properties of water molecules in a nano-scale channel such as CNTs is critical for its key role in designing the next generation CNT based nanofluidic devices. The effect of channel diameter, defects and the inter-layer spacing on the transport of water molecules is studied by subjecting the flow of water molecules through CNTs under pressure. The findings show that the efficiency of water transport can be improved by deploying bigger SWCNTs that have wide channel diameter. It was however found that defects in the nano-fluidic system will reduce the transport efficiency of water molecules. The results also show that the inter-layer spacing in a double-walled CNTs (DWCNTs) has a significant influence on the transport efficiency of water molecules. The investigations and conclusions obtained from this thesis is expected to further compliment the potential applications of CNTs in nano-fluidics and NEMS devices. read less NOT USED (high confidence) E. Iype and A. A. Steenhoven, “In silico characterisation of magnesium salt hydrates as energy storage materials.” 2014. link Times cited: 3 Abstract: • A submitted manuscript is the author's version of the… read moreAbstract: • A submitted manuscript is the author's version of the article upon submission and before peer-review. There can be important differences between the submitted version and the official published version of record. People interested in the research are advised to contact the author for the final version of the publication, or visit the DOI to the publisher's website. • The final author version and the galley proof are versions of the publication after peer review. • The final published version features the final layout of the paper including the volume, issue and page numbers. read less NOT USED (high confidence) E. Sandoz-Rosado, “The tribological behavior of graphene and its role as a protective coating.” 2013. link Times cited: 5 Abstract: The tribological behavior of graphene and its role as a prot… read moreAbstract: The tribological behavior of graphene and its role as a protective coating Emil Jose Sandoz-Rosado The scope of this thesis is to explore the fundamental tribological behavior of graphene as a two-dimensional (2-D) nanomaterial and evaluate its performance as a protective coating. Graphene is the strongest material ever measured, gas-impermeable, chemically and thermally stable, and atomically-thin, making it an excellent candidate as a protective coating. The fundamental tribological behavior of graphene and other 2-D materials under sliding conditions has only just begun to be explored. In particular, the wear of graphene has hardly been explored. The objective of this work is to investigate the tribological behavior of graphene through atomistic simulation as well as experimental testing under various sliding regimes and length scales. Wear in a graphene monolayer, after scratch tests with a nanoindenter, was characterized for the first time using Raman spectroscopy, revealing new insights into the failure of graphene after sliding. These sliding tests revealed a new frictional phenomenon where friction increased linearly with sliding length over large distances. This was caused by delamination likely due to the coalescence of small bubbles of gas trapped between the graphene monolayer and substrate during sliding, confirmed with atomic force microscopy. Furthermore, atomistic simulations of an asperity sliding over a graphene bubble mimicked experimental results, further supporting this bubble coalescence hypothesis. Graphene’s potential as an anti-corrosive coating was demonstrated for macro-scale, commercially-available electrical connectors. It was demonstrated that even a monolayer of graphene can prevent oxide and reduce electrical contact resistance by orders of magnitude. read less NOT USED (high confidence) M. Nishimura, Y. Takagi, and M. Arai, “Molecular Dynamics Study on Buckling Behavior of Non-Defective and Defective Triple-Walled Carbon Nanotubes,” Journal of Solid Mechanics and Materials Engineering. 2013. link Times cited: 3 Abstract: In order to discuss the origin of the buckling of carbon nan… read moreAbstract: In order to discuss the origin of the buckling of carbon nanotubes from the atomic level, we have performed the compressive simulation of non-defective and defective triple-walled carbon nanotubes (TWCNT) by the molecular dynamics method using the adaptive intermolecular reactive empirical bond order potential, and observed changes in atomic stresses until the buckling. In the non-defective TWCNT, standard deviations of atomic axial stresses rise drastically before the buckling. The transition from homogeneous stress distributions to inhomogeneous ones play an important role in the occurrence of the buckling. In TWCNTs with a vacancy-type defect or a Stone-Wales defect, buckling stresses di ff er according to location of the defect. Repulsive interlayer interactions caused by the constriction of the outer layer including a defect reduce significantly the buckling strength. On the other hand, constrictions of the middle or inner layer including a defect produce slightly attractive interaction with the outer layer. Therefore, whole layers is buckled at the same time as the buckling of the outer non-defective layers. TWCNTs including many defects that are generated by the heat treatment simulation show smaller buckling stresses than that of TWCNTs including a defect. Defect configurations have a significant influence on distribution of atomic stresses until the buckling. The buckling occurs from constriction parts located close to defects. read less NOT USED (high confidence) H. Aktulga, S. A. Pandit, A. Duin, and A. Grama, “Reactive Molecular Dynamics: Numerical Methods and Algorithmic Techniques,” SIAM J. Sci. Comput. 2012. link Times cited: 62 Abstract: Modeling atomic and molecular systems requires computation-i… read moreAbstract: Modeling atomic and molecular systems requires computation-intensive quantum mechanical methods such as, but not limited to, density functional theory [R. A. Friesner, Proc. Natl. Acad. Sci. USA, 102 (2005), pp. 6648-6653]. These methods have been successful in predicting various properties of chemical systems at atomistic scales. Due to the inherent nonlocality of quantum mechanics, the scalability of these methods ranges from O($N^3$) to O($N^7$) depending on the method used and approximations involved. This significantly limits the size of simulated systems to a few thousand atoms, even on large scale parallel platforms. On the other hand, classical approximations of quantum systems, although computationally (relatively) easy to implement, yield simpler models that lack essential chemical properties such as reactivity and charge transfer. The recent work of van Duin et al. [J. Phys. Chem. A, 105 (2001), pp. 9396-9409] overcomes the limitations of nonreactive classical molecular dynamics (MD) approximations by carefully incorporating limited nonlocality (to mimic quantum behavior) through an empirical bond order potential. This reactive classical MD method, called ReaxFF, achieves essential quantum properties, while retaining the computational simplicity of classical MD, to a large extent. Implementation of reactive force fields presents significant algorithmic challenges. Since these methods model bond breaking and formation, efficient implementations must rely on complex dynamic data structures. Charge transfer in these methods is accomplished by minimizing electrostatic energy through charge equilibration. This requires the solution of large linear systems ($10^8$ degrees of freedom and beyond) with shielded electrostatic kernels at each time-step. Individual time-steps are themselves typically in the range of tenths of femtoseconds, requiring optimizations within and across time-steps to scale simulations to nanoseconds and beyond, where interesting phenomena may be observed. In this paper, we present implementation details of sPuReMD (serial Purdue reactive molecular dynamics program), a unique reactive classical MD code. We describe various data structures, and the charge equilibration solver at the core of the simulation engine. This Krylov subspace solver relies on a preconditioner based on incomplete LU factorization with thresholds (ILUT), specially targeted to our application. We comprehensively validate the performance and accuracy of sPuReMD on a variety of hydrocarbon systems. In particular, we show excellent per-time-step time, linear time scaling in system size, and a low memory footprint. sPuReMD is a freely distributed software with GPL and is currently being used to model diverse systems ranging from oxidative stress in biomembranes to strain relaxation in Si-Ge nanorods. read less NOT USED (high confidence) W. M. Brown et al., “An Evaluation of Molecular Dynamics Performance on the Hybrid Cray XK6 Supercomputer,” International Conference on Conceptual Structures. 2012. link Times cited: 26 NOT USED (high confidence) R. Bouma, A. Heijden, T. Sewell, and D. Thompson, “Simulations of Deformation Processes in Energetic Materials.” 2011. link Times cited: 9 Abstract: The sensitivity of energetic materials has been studied exte… read moreAbstract: The sensitivity of energetic materials has been studied extensively for more than half a century, both experimentally and numerically, due to its importance for reliable functioning of a munition and avoidance or mitigation of accidents (Bowden & Yoffe, 1952). While the shock initiation of an explosive under nominal conditions is relatively well understood from an engineering perspective, our understanding of initiation due to unintended stimuli (weak shock or fragment impact, fire, damaged explosive charge) is far less complete. As an example, one cannot exclude the ignition of an explosive due to mechanical deformation, potentially leading to lowor even high-order explosion/detonation as a consequence of mechanical stimuli with strain rates and pressures well below the shock sensitivity threshold. During the last two decades there has been an increased interest in the scientific community in understanding initiation sensitivity of energetic materials to weak insults. A relationship between energy dissipation and rate of plastic deformation has been developed for crystalline energetic materials (Coffey & Sharma, 1999). Chemical reactions are initiated in crystalline solids when a crystal-specific threshold energy is exceeded. In this sense, initiation is linked to the rate of plastic deformation. However, practical energetic materials are usually heterogeneous composites comprised of one or more kinds of energetic crystals (the filler, for which the mass fraction can exceed 90%) bound together with a binder matrix that often consists of several different polymer, plasticizer, and stabilizer materials. Clearly, the mechanical behavior of these polymer-bonded (plastic-bonded) explosives (PBXs) is far more complicated than for neat crystals of high explosive. It is necessary in realistic constitutive modeling of energetic compositions to incorporate features reflecting the complex, multiphase, multiscale structural, dynamical, and chemical properties; see, for example, Bennett et al., 1998, and Conley & Benson, 1999. The goal in constitutive modeling is to bridge the particulate nature at the mesoscale to the mechanical properties at the macroscale. The macroscale deformations applied to PBX composites in experiments are generally not the same as the local deformation fields in a component crystal within the composite. This has been demonstrated using grain-resolved mesoscale simulations wherein the individual grains and binder phases in a PBX are resolved within a continuum simulation framework. read less NOT USED (high confidence) A. Ito and S. Okamoto, “Molecular Dynamics Simulations on Tension of Graphene and Graphite Containing Vacancies,” Transactions of the Japan Society of Mechanical Engineers. A. 2011. link Times cited: 1 Abstract: We investigated the mechanical properties of graphene or gra… read moreAbstract: We investigated the mechanical properties of graphene or graphite containing cluster-type vacancies or two single vacancies under tensile loading using molecular dynamics (MD) simulation. In the MD simulation, two types of potentials were used: the second-generational REBO potential for covalent bond and the Lennard-Jones potential for the interlayer interaction of graphite. We found that the tensile strength drastically decreases with increasing the size of vacancies, while the Young's modulus hardly changes. We also found that the slip deformation occurs in graphene containing vacancies under Zigzag tension, while that doesn't occur in pristine graphene until just before fracture. In addition, it was found that the tensile strength of graphene is affected by the slip deformation rather than by the distance between two single vacancies which are distributed in the loading direction or its traverse direction. Our results show that the displacements of atoms around the vacancy become a trigger that causes the slip deformation. read less NOT USED (high confidence) M. Hamdi and A. Ferreira, “Methodology of Design and Characterization of Bionano- and Nanorobotic Devices.” 2011. link Times cited: 1 NOT USED (high confidence) G. B. Abadir, “Simulation studies of the mechanisms of interaction between carbon nanotubes and amino acids.” 2010. link Times cited: 0 Abstract: In this thesis, molecular dynamics and ab initio density fun… read moreAbstract: In this thesis, molecular dynamics and ab initio density functional theory/nonequilibrium Green’s function simulations are used to study the interaction between carbon nanotubes and amino acids. Firstly, rules for the proper choice of the parameters used in these simulations are established. It is demonstrated how the improper choice of these parameters (particularly the basis set used in ab initio simulations) can lead to quantitatively and qualitatively erroneous conclusions regarding the bandgap of the nanotubes. It is then shown that the major forces responsible for amino-acid adsorption on carbon nanotubes are van der Waals forces, and that hydrophobic interactions may accelerate the adsorption process, but are not necessary for it to occur. The mechanisms of interaction between carbon nanotubes and amino acids are elucidated. It is found that geometrical deformations do not play a major role in the sensing process, and that electrostatic interactions represent the major interaction mechanism between the tubes and amino acids. Fully metallic armchair tubes are found to be insensitive to various amino acids, while small-radius nanotubes are shown to be inadequate for sensing in aqueous media, as their response to the motion of the atoms resulting from the immersion in water is comparable to that of analyte adsorption. Short semi-metallic tubes are revealed to be sensitive to charged amino acids, and it is demonstrated that the conductance changes induced by the adsorption of the analyte in such tubes in a two-terminal configuration are bias-dependent. The effects of the length of the tube and adsorption-site position on the conductance of the tube are discussed. In addition, the adsorption near metallic electrodes is shown to have a negligible effect on the conductance of the tube due to the metal-induced gap states injected from the metal electrodes into the tube. Finally, the results are used to provide general guidelines for the design of carbon-nanotube-based biosensors, as well as to help explaining previously published experimental results. read less NOT USED (high confidence) D. Schebarchov, “Mechanisms in Carbon Nanotube Growth: Modelling and Molecular Dynamics Simulations.” 2010. link Times cited: 0 Abstract: A selection of nanoscale processes is studied theoretically,… read moreAbstract: A selection of nanoscale processes is studied theoretically, with the aim of identifying themechanisms that could lead to selective carbon nanotube (CNT) growth. Only mechanisms relevant to catalytic chemical vapour deposition (CVD) are considered. The selected processes are analysed with classical molecular dynamics (MD) simulations and continuum modelling. The melting and pre-melting behaviour of supported nickel catalyst particles is investigated. Favourable epitaxy between a nanoparticle and the substrate is shown to significantly raise themelting point of the particle. It is also demonstrated that substrate binding can induce solid-solid transformations, whilst the epitaxy may even determine the orientation of individual crystal planes in supported catalysts. These findings suggest that the substrate crystal structure alone can potentially be used to manipulate the properties of catalyst particles and, hence, influence the structure of CNTs. The first attempt at modelling catalyst dewetting, a process where the catalyst unbinds from the inner walls of a nucleating nanotube, is presented. It is argued that understanding this process and gaining control over itmay lead to better selectivity in CNT growth. Two mutually exclusive dewetting mechanisms, namely cap lift-off and capillary withdrawal, are identified and then modelled as elastocapillary phenomena. The modelling yields an upper bound on the diameter of CNTs that can stem from a catalyst particle of a given size. It is also demonstrated that cap lift-off is sensitive to cap topology, suggesting that it may be possible to link catalyst characteristics to the structural properties of nucleating CNTs. However, a clear link to the chiral vector remains elusive. It is shown that particle size, as well as binding affinity, plays a critical role in capillary absorption and withdrawal of catalyst nanoparticles. This size dependence is explored in detail, revealing interesting ramifications to the statics and dynamics of capillary-driven flows at the nanoscale. The findings bear significant implications for our understanding of CNT growth from catalyst particles, whilst also suggesting new nanofluidic applications and methods for fabricating composite metal-CNT materials. read less NOT USED (high confidence) K. Endo, K. Hayashi, T. Ida, D. Matsumoto, and N. Kato, “Theoretical Mass Spectra of PE, PP, PS and PET Polymers by QMD Methods Using the Model Molecules,” Journal of Surface Analysis. 2010. link Times cited: 2 Abstract: We used a quantum molecular dynamics {QMD (MD with MO)} due … read moreAbstract: We used a quantum molecular dynamics {QMD (MD with MO)} due to the force function of MO with the velocity Verlet algorithm using the model oligomers of PE, PP, PS, and PET polymers to obtain theoretical mass spectra of the polymers. The QMD calculation was performed in the thermal energy range of 0.69 - 0.95 eV, and the sampling position data by a time step of 0.5 fs were performed up to 5000 steps. The fragments at the final step of 60 trajectories in the QMD were obtained as positive, negative, and neutral charged ones from the net atomic charge analysis at geometry-optimization of the MO SCF calculations. We can compare the positive ion fragments of polymer models with the experimental distribution of polymers in mass spectra and secondary ionization mass spectra after a few tens of keV of primary heavy metal ion bombardment. We also showed the chemical structures of fragments for PE, PP, PS, and PET polymers in positive ion spectra, unavailable from experimental methods. read less NOT USED (high confidence) A. Volkov, K. R. Simov, and L. Zhigilei, “MESOSCOPIC MODEL FOR SIMULATION OF CNT-BASED MATERIALS.” 2008. link Times cited: 11 Abstract: A mesoscopic computational model is developed for simulation… read moreAbstract: A mesoscopic computational model is developed for simulation of the collective behavior of carbon nanotubes (CNTs) in CNT-based materials. The model adopts a coarsegrained representation of a CNT as a sequence of stretchable cylindrical segments defined by a chain of nodes. The dynamic behavior of CNTs is governed by the equations of motion for the nodes, enabling computationally efficient “molecular dynamics-type” simulations. The internal part of the mesoscopic force field takes into account stretching and bending of individual CNTs. A novel computationally-efficient “tubular” potential method is developed for the description of van der Waals interactions among the nanotubes. The parameterization of the “tubular” potential is based on an interatomic potential for non-bonded interactions between carbon atoms. The application of the mesoscopic model to simulation of systems consisting of hundreds of CNTs demonstrates perfect energy conservation for times as long as tens of nanoseconds. Self-assembly of CNTs into bundles with hexagonal ordering of nanotubes is observed in simulations performed for systems with initial random orientation of CNTs. read less NOT USED (high confidence) L. Rzeznik, B. Czerwinski, B. Garrison, N. Winograd, and Z. Postawa, “Microscopic Insight into the Sputtering of Thin Polystyrene Films on Ag111 Induced by Large and Slow Ar Clusters,” Journal of Physical Chemistry C. 2008. link Times cited: 50 Abstract: Molecular dynamics computer simulations were employed to mod… read moreAbstract: Molecular dynamics computer simulations were employed to model the bombardment of Ag{111} covered with a monolayer of sec-butyl-terminated polystyrene tetramer (PS4) molecules by the impact of large and slow clusters. The investigated surface was bombarded with clusters composed of between hundreds to 29 000 Ar atoms having a very low kinetic energy per atom (0.1-40 eV). The sputtering yield of molecular species and their internal, angular, and kinetic energy distributions were analyzed. The simulations demonstrated quite clearly that the physics of ejection by these large and slow clusters is distinct from the ejection events stimulated by the popular SIMS clusters, C 60 , Au 3 , and SF 5 . read less NOT USED (high confidence) D. Han, M. Pecht, D. K. Anand, and R. Kavetsky, “Energetic Material/ Systems Prognostics,” 2007 Annual Reliability and Maintainability Symposium. 2007. link Times cited: 14 Abstract: The US military and weapons industries require their weapon … read moreAbstract: The US military and weapons industries require their weapon systems to be reliable. As inexpensive miniaturized sensors and affordable simulation tools have become available, the prognostics method has begun to attract the attention of engineers seeking a new way to increase and optimize system reliability. This paper presents the tools currently available and being developed for prognostics of military energetic systems. Key elements of the study were assessments of available energetic material models, as well as current and future sensors for monitoring the health of energetic systems. A roadmap for developing prognostic methodologies is proposed read less NOT USED (high confidence) G. Csányi, G. Moras, J. Kermode, M. Payne, A. Mainwood, and A. Vita, “Multiscale modeling of defects in semiconductors : a novel molecular-dynamics scheme,” Topics in Applied Physics. 2007. link Times cited: 5 NOT USED (high confidence) M. Buehler, J. Dodson, A. Duin, and W. Goddard, “The Computational Materials Design Facility (CMDF): A powerful framework for multi-paradigm multi-scale simulations,” MRS Proceedings. 2005. link Times cited: 22 Abstract: Predicting the properties and behavior of materials by compu… read moreAbstract: Predicting the properties and behavior of materials by computer simulation from a fundamental, ab initio perspective has long been a vision of computational material scientists. The key to achieving this goal is utilizing hierarchies of paradigms and scales that connect macrosystems to first principles quantum mechanics (QM). Here we describe a new software environment, the “Computational Materials Design Facility” (CMDF), capable of simulations of complex materials studies using a variety of simulation paradigms. The CMDF utilizes a Python scripting layer to integrate different computational tools to develop multi-scale simulation applications. We have integrated DFT QM methods, the first principles ReaxFF reactive force field, empirical all atom force fields (FFs), mesoscale and continuum methods. The central data structure Extended OpenBabel (XOB) plays a critical role as glue between applications. We demonstrate the usefulness of CMDF in examples that couple complex chemistry and mechanical properties during dynamical failure processes, as for example in a study of cracking of Ni under presence of O 2 . read less NOT USED (high confidence) G. Zheng, S. Irle, and K. Morokuma, “Towards formation of buckminsterfullerene C60 in quantum chemical molecular dynamics.,” The Journal of chemical physics. 2005. link Times cited: 35 Abstract: We present follow-up studies on the formation mechanism of f… read moreAbstract: We present follow-up studies on the formation mechanism of fullerene molecules from random ensembles of C2 molecules using quantum chemical molecular dynamics. Two possible roadmaps are investigated as to how buckminsterfullerene C60 and higher fullerenes could be formed. In a "size-up" scenario, fullerenes of the cage size of C72-C96 were found to form directly from high concentrations of C2 molecules at 2000 K with periodic supply of batches of additional C2's. In a "size-down" approach, smaller fullerenes are sometimes formed by losing carbon fragments in "fall-off" or "pop-out" annealing processes under prolonged heating of giant fullerenes, which were self-assembled at initial stages from C2's with lower concentrations. Both roadmaps are found to provide explanations for the appearance of C60 and larger fullerenes in combustion and carbon arc experiments. read less NOT USED (high confidence) P. Mikulski and J. Harrison, “Periodicities in the properties associated with the friction of model self-assembled monolayers,” Tribology Letters. 2001. link Times cited: 40
|