Title
A single sentence description.
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A hybrid neural network potential for multilayer graphene systems developed by Wen and Tadmor (2019) v000 |
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Description
A short description of the Model describing its key features including for example: type of model (pair potential, 3-body potential, EAM, etc.), modeled species (Ac, Ag, ..., Zr), intended purpose, origin, and so on.
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A hybrid neural network (NN) and Lennard-Jones (LJ) model driver for multilayer graphene systems. The NN term models short-range intralayer and orbital overlap interactions and the theoretically-motivated LJ term models long-range dispersion. The potential is trained against a large dataset of monolayer graphene, bilayer graphene, and graphite configurations obtained from ab initio total-energy calculations based on density functional theory (DFT). The potential provides accurate energy and forces for both intralayer and interlayer interactions, correctly reproducing DFT results for structural, energetic, and elastic properties such as the equilibrium layer spacing, interlayer binding energy, elastic moduli, and phonon dispersions to which it was not fit. |
Species
The supported atomic species.
| C |
Disclaimer
A statement of applicability provided by the contributor, informing users of the intended use of this KIM Item.
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This model is designed for multilayer graphene systems and graphite. It is not appropriate for bulk carbon structures. |
Contributor |
Mingjian Wen |
Maintainer |
Mingjian Wen |
Published on KIM | 2019 |
How to Cite | Click here to download this citation in BibTeX format. |
Funding | Not available |
Short KIM ID
The unique KIM identifier code.
| MO_421038499185_000 |
Extended KIM ID
The long form of the KIM ID including a human readable prefix (100 characters max), two underscores, and the Short KIM ID. Extended KIM IDs can only contain alpha-numeric characters (letters and digits) and underscores and must begin with a letter.
| hNN_WenTadmor_2019Grx_C__MO_421038499185_000 |
DOI |
10.25950/bd8257d9 https://doi.org/10.25950/bd8257d9 https://commons.datacite.org/doi.org/10.25950/bd8257d9 |
KIM Item Type
Specifies whether this is a Portable Model (software implementation of an interatomic model); Portable Model with parameter file (parameter file to be read in by a Model Driver); Model Driver (software implementation of an interatomic model that reads in parameters).
| Portable Model using Model Driver hNN__MD_435082866799_000 |
Driver | hNN__MD_435082866799_000 |
KIM API Version | 2.0 |
Potential Type | hnn |
Grade | Name | Category | Brief Description | Full Results | Aux File(s) |
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P | vc-species-supported-as-stated | mandatory | The model supports all species it claims to support; see full description. |
Results | Files |
P | vc-periodicity-support | mandatory | Periodic boundary conditions are handled correctly; see full description. |
Results | Files |
P | vc-permutation-symmetry | mandatory | Total energy and forces are unchanged when swapping atoms of the same species; see full description. |
Results | Files |
A | vc-forces-numerical-derivative | consistency | Forces computed by the model agree with numerical derivatives of the energy; see full description. |
Results | Files |
P | vc-dimer-continuity-c1 | informational | The energy versus separation relation of a pair of atoms is C1 continuous (i.e. the function and its first derivative are continuous); see full description. |
Results | Files |
P | vc-objectivity | informational | Total energy is unchanged and forces transform correctly under rigid-body translation and rotation; see full description. |
Results | Files |
P | vc-inversion-symmetry | informational | Total energy is unchanged and forces change sign when inverting a configuration through the origin; see full description. |
Results | Files |
P | vc-memory-leak | informational | The model code does not have memory leaks (i.e. it releases all allocated memory at the end); see full description. |
Results | Files |
P | vc-thread-safe | mandatory | The model returns the same energy and forces when computed in serial and when using parallel threads for a set of configurations. Note that this is not a guarantee of thread safety; see full description. |
Results | Files |
F | vc-unit-conversion | mandatory | The model is able to correctly convert its energy and/or forces to different unit sets; see full description. |
Results | Files |
This bar chart plot shows the mono-atomic body-centered cubic (bcc) lattice constant predicted by the current model (shown in the unique color) compared with the predictions for all other models in the OpenKIM Repository that support the species. The vertical bars show the average and standard deviation (one sigma) bounds for all model predictions. Graphs are generated for each species supported by the model.
(No matching species)This graph shows the cohesive energy versus volume-per-atom for the current mode for four mono-atomic cubic phases (body-centered cubic (bcc), face-centered cubic (fcc), simple cubic (sc), and diamond). The curve with the lowest minimum is the ground state of the crystal if stable. (The crystal structure is enforced in these calculations, so the phase may not be stable.) Graphs are generated for each species supported by the model.
(No matching species)This bar chart plot shows the mono-atomic face-centered diamond lattice constant predicted by the current model (shown in the unique color) compared with the predictions for all other models in the OpenKIM Repository that support the species. The vertical bars show the average and standard deviation (one sigma) bounds for all model predictions. Graphs are generated for each species supported by the model.
(No matching species)This graph shows the dislocation core energy of a cubic crystal at zero temperature and pressure for a specific set of dislocation core cutoff radii. After obtaining the total energy of the system from conjugate gradient minimizations, non-singular, isotropic and anisotropic elasticity are applied to obtain the dislocation core energy for each of these supercells with different dipole distances. Graphs are generated for each species supported by the model.
(No matching species)This bar chart plot shows the mono-atomic face-centered cubic (fcc) elastic constants predicted by the current model (shown in blue) compared with the predictions for all other models in the OpenKIM Repository that support the species. The vertical bars show the average and standard deviation (one sigma) bounds for all model predictions. Graphs are generated for each species supported by the model.
(No matching species)This bar chart plot shows the mono-atomic face-centered cubic (fcc) lattice constant predicted by the current model (shown in red) compared with the predictions for all other models in the OpenKIM Repository that support the species. The vertical bars show the average and standard deviation (one sigma) bounds for all model predictions. Graphs are generated for each species supported by the model.
(No matching species)This bar chart plot shows the intrinsic and extrinsic stacking fault energies as well as the unstable stacking and unstable twinning energies for face-centered cubic (fcc) predicted by the current model (shown in blue) compared with the predictions for all other models in the OpenKIM Repository that support the species. The vertical bars show the average and standard deviation (one sigma) bounds for all model predictions. Graphs are generated for each species supported by the model.
(No matching species)This bar chart plot shows the mono-atomic face-centered cubic (fcc) relaxed surface energies predicted by the current model (shown in blue) compared with the predictions for all other models in the OpenKIM Repository that support the species. The vertical bars show the average and standard deviation (one sigma) bounds for all model predictions. Graphs are generated for each species supported by the model.
(No matching species)This bar chart plot shows the mono-atomic simple cubic (sc) lattice constant predicted by the current model (shown in the unique color) compared with the predictions for all other models in the OpenKIM Repository that support the species. The vertical bars show the average and standard deviation (one sigma) bounds for all model predictions. Graphs are generated for each species supported by the model.
(No matching species)This model is designed for multilayer graphene systems and graphite. It is not appropriate for bulk carbon structures.
Test | Test Results | Link to Test Results page | Benchmark time
Usertime multiplied by the Whetstone Benchmark. This number can be used (approximately) to compare the performance of different models independently of the architecture on which the test was run.
Measured in Millions of Whetstone Instructions (MWI) |
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Elastic constants for hcp C at zero temperature v004 | view | 15950 |
Test | Test Results | Link to Test Results page | Benchmark time
Usertime multiplied by the Whetstone Benchmark. This number can be used (approximately) to compare the performance of different models independently of the architecture on which the test was run.
Measured in Millions of Whetstone Instructions (MWI) |
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Cohesive energy and equilibrium lattice constant of graphene v002 | view | 1855 |
Test | Test Results | Link to Test Results page | Benchmark time
Usertime multiplied by the Whetstone Benchmark. This number can be used (approximately) to compare the performance of different models independently of the architecture on which the test was run.
Measured in Millions of Whetstone Instructions (MWI) |
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Equilibrium zero-temperature lattice constant for bcc C v007 | view | 5662 | |
Equilibrium zero-temperature lattice constant for diamond C v007 | view | 12892 | |
Equilibrium zero-temperature lattice constant for fcc C v007 | view | 6110 | |
Equilibrium zero-temperature lattice constant for sc C v007 | view | 3423 |
Test | Test Results | Link to Test Results page | Benchmark time
Usertime multiplied by the Whetstone Benchmark. This number can be used (approximately) to compare the performance of different models independently of the architecture on which the test was run.
Measured in Millions of Whetstone Instructions (MWI) |
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Equilibrium lattice constants for hcp C v005 | view | 658050 |
Test | Error Categories | Link to Error page |
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Equilibrium lattice constants for hcp C | other | view |
Verification Check | Error Categories | Link to Error page |
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MemoryLeak__VC_561022993723_001 | other | view |
ThreadSafety__VC_881176209980_001 | other | view |
hNN_WenTadmor_2019Grx_C__MO_421038499185_000.txz | Tar+XZ | Linux and OS X archive |
hNN_WenTadmor_2019Grx_C__MO_421038499185_000.zip | Zip | Windows archive |
This Model requires a Model Driver. Archives for the Model Driver hNN__MD_435082866799_000 appear below.
hNN__MD_435082866799_000.txz | Tar+XZ | Linux and OS X archive |
hNN__MD_435082866799_000.zip | Zip | Windows archive |